Carg17336 (gene) Silver-seed gourd

Overview
NameCarg17336
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionphylloplanin-like
LocationCucurbita_argyrosperma_scaffold_092 : 86687 .. 87355 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATGGGTTTGAAATCAGTATTGTTTGTCTTCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAGTAAGTTATTTTCAAATTAGTTGAGCTATGTTCAAATTGATAAACTATTTATATGCGTATATATTTTTCATGCAGATGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCTTTACAGCTCCTTCTCTCTTCAGTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATATTCCAACCATCTACATAAAACTGCTTATGACTTGTGTTTGATGTGTTTGCTGTTGTCAAAAATAAACGTTGTCCGTGTCCGTGTCCGTGTCTGTGTCTGTGTCTGTGTCTGTGTTCGTGTTCGGGTTCGGGTAGC

mRNA sequence

AAAATGGGTTTGAAATCAGTATTGTTTGTCTTCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAATGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCTTTACAGCTCCTTCTCTCTTCAGTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATATTCCAACCATCTACATAAAACTGCTTATGACTTGTGTTTGATGTGTTTGCTGTTGTCAAAAATAAACGTTGTCCGTGTCCGTGTCCGTGTCTGTGTCTGTGTCTGTGTCTGTGTTCGTGTTCGGGTTCGGGTAGC

Coding sequence (CDS)

ATGGGTTTGAAATCAGTATTGTTTGTCTTCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAATGCAGCCGTGCAACTGCAATGCGGAAACGGAAACGTCGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCTTTACAGCTCCTTCTCTCTTCAGTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATATTCCAACCATCTACATAA

Protein sequence

MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPAFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPST
Homology
[Close]
BLAST of Carg17336 vs. NCBI nr
Match: XP_022937971.1 (phylloplanin-like [Cucurbita moschata])

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 155/157 (98.73%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSL RIQGTVFCTANGNIGTNGTATPA
Sbjct: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLARIQGTVFCTANGNIGTNGTATPA 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL
Sbjct: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPST 158
           PSVGNLVSALNLVGMTFQGLLRITNIIPTGF+FQPST
Sbjct: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPST 157

[Close]
BLAST of Carg17336 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.8 bits (730), Expect = 8.9e-74
Identity = 154/157 (98.09%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           MGLKSVLFV VMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA
Sbjct: 1   MGLKSVLFVCVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSS+TSNCSVVVNTPLSSCNATL
Sbjct: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSLTSNCSVVVNTPLSSCNATL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPST 158
           PSVGNLVSALNLVGMTFQGLLRITNIIPTGF+FQPST
Sbjct: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPST 157

[Close]
BLAST of Carg17336 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima])

HSP 1 Score: 252.7 bits (644), Expect = 8.3e-64
Identity = 136/157 (86.62%), Postives = 141/157 (89.81%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           MGLKSVLFV VM AAMGAPLMV EAQLGSIGSLLSLTRIQGTVFCTA+GNIG NGTATP 
Sbjct: 1   MGLKSVLFVLVMAAAMGAPLMVAEAQLGSIGSLLSLTRIQGTVFCTADGNIGANGTATPI 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNAAVQLQCGNGNVVSTATTNSAG+F ILL+PLQ LLSS+TSNCSV+VNTPLSSCNATL
Sbjct: 61  FPNAAVQLQCGNGNVVSTATTNSAGMFLILLNPLQFLLSSLTSNCSVLVNTPLSSCNATL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPST 158
           PSVGNLVS LN  G   QGLL ITNIIP GF FQPST
Sbjct: 121 PSVGNLVSGLNFAGTILQGLLSITNIIPRGFTFQPST 157

[Close]
BLAST of Carg17336 vs. NCBI nr
Match: XP_002269079.1 (PREDICTED: phylloplanin [Vitis vinifera] >CBI22995.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 193.4 bits (490), Expect = 6.0e-46
Identity = 106/156 (67.95%), Postives = 125/156 (80.13%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGS-IGSLLSLTRIQGTVFCTANGNIGTNGTATP 60
           M LKS+LF  ++VA   AP  V EAQLG+ IGS+L L RIQG +FCTANGN+G NGTATP
Sbjct: 1   MALKSLLFFSLLVAVAAAP--VAEAQLGNIIGSILDLIRIQGNLFCTANGNMGVNGTATP 60

Query: 61  AFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNAT 120
            FPNA VQLQCG GNV+S+ATTNSAG+FSILLDPLQ LLSS+ +NC++VVNTPLS+CN+ 
Sbjct: 61  VFPNAPVQLQCGAGNVISSATTNSAGLFSILLDPLQFLLSSLLTNCNLVVNTPLSTCNSG 120

Query: 121 LPSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQP 156
           LPS G L+S L L+G T QG L ITNIIP  F+F P
Sbjct: 121 LPSSGALLSPLRLIGNTLQGPLHITNIIPANFVFLP 154

[Close]
BLAST of Carg17336 vs. NCBI nr
Match: XP_015899888.1 (phylloplanin-like [Ziziphus jujuba])

HSP 1 Score: 185.7 bits (470), Expect = 1.2e-43
Identity = 99/156 (63.46%), Postives = 123/156 (78.85%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           M LK +  V +MVA M AP+   EAQLG I SLL L RIQGT++CT NGN+G NGT+TP 
Sbjct: 1   MALKLLFLVCLMVAVMAAPM--AEAQLGIISSLLGLIRIQGTLYCTPNGNMGVNGTSTPV 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           F NA VQLQCG+GNVVS+ATTNS+G+FSI+LDPL  +LSS+ S+C +VV+TPLS+CNA+L
Sbjct: 61  FSNALVQLQCGSGNVVSSATTNSSGIFSIVLDPLHFVLSSLLSDCKLVVSTPLSTCNASL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPS 157
           PS G L+S+L  +G T  GLL I+NIIP+GF F PS
Sbjct: 121 PSAGGLLSSLQFIGNTVLGLLNISNIIPSGFQFLPS 154

[Close]
BLAST of Carg17336 vs. TAIR10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-30
Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 0 

Query: 36  LTRIQGTVFCTANGNIGTNGTATPAFPNAAVQLQCGNGN-VVSTATTNSAGVFSILLDPL 95
           L  I G VFC+ NG    +GT+TPAF NA V+LQCG  N VVSTATTN+AG+FS+  D +
Sbjct: 62  LVNINGVVFCSLNG--APSGTSTPAFANAGVELQCGRQNRVVSTATTNAAGLFSLPTDSI 121

Query: 96  QLLLSSVTSNCSVVVNTPLSSCNATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGF 152
           Q+LLS++ S+C VVV TPLS+CNA LPSVGNLVS L ++G +  GLL I +IIP GF
Sbjct: 122 QMLLSTLLSDCRVVVTTPLSTCNANLPSVGNLVSRLAMIGNSLTGLLNIISIIPAGF 176

[Close]
BLAST of Carg17336 vs. TAIR10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.6e-24
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 0 

Query: 4   KSVLFVFVMVA-AMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPAFP 63
           K + F  V++   + +P+   ++ LG I    ++  I G +FCT NG    NGT  PAF 
Sbjct: 6   KHITFSLVLLCLIVVSPMANAQSGLGGI----NVPIINGVLFCTING-APLNGTPAPAFA 65

Query: 64  NAAVQLQCGNGN-VVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATLP 123
           NA VQLQCGN N VV+   TN AG+F+   + +Q+ L ++ ++C +VV TP SSC+ATLP
Sbjct: 66  NAVVQLQCGNLNRVVAETITNIAGLFTFSTNGIQISLPTLLNDCRIVVPTPRSSCDATLP 125

Query: 124 SVGNLVSALNLVGMTFQGLLRITNIIPTGFI 153
           S G L+S LNLVG    GLL I  I+PTGFI
Sbjct: 126 STGQLISQLNLVGSIVSGLLNIVAILPTGFI 151

[Close]
BLAST of Carg17336 vs. Swiss-Prot
Match: sp|Q56S59|PHYLL_TOBAC (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 66/156 (42.31%), Postives = 91/156 (58.33%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGT-NGTATP 60
           M    +  +F++ A +  P     A    +   L  T I G VFC+ NGN+   NG +  
Sbjct: 1   MASAKIFLIFLLAALIATP-----AAFAILVPTLVSTHISGLVFCSVNGNLDVINGLSPQ 60

Query: 61  AFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNAT 120
            FPNA+VQL+CG  NV+S+  TN +G FS+ ++   LL      NC++VV TPLS+CNAT
Sbjct: 61  VFPNASVQLRCGATNVISSTITNGSGAFSLAVNTFPLL------NCNLVVATPLSTCNAT 120

Query: 121 LPSVGNLVSALNLVGMTF---QGLLRITNIIPTGFI 153
           L SVG L S+L LV +T     GL+R+  + PTGFI
Sbjct: 121 LQSVGRLASSLRLVNITLGSGTGLIRV-GLAPTGFI 144

[Close]
BLAST of Carg17336 vs. TrEMBL
Match: tr|D7SYD8|D7SYD8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g02280 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.0e-46
Identity = 106/156 (67.95%), Postives = 125/156 (80.13%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGS-IGSLLSLTRIQGTVFCTANGNIGTNGTATP 60
           M LKS+LF  ++VA   AP  V EAQLG+ IGS+L L RIQG +FCTANGN+G NGTATP
Sbjct: 1   MALKSLLFFSLLVAVAAAP--VAEAQLGNIIGSILDLIRIQGNLFCTANGNMGVNGTATP 60

Query: 61  AFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNAT 120
            FPNA VQLQCG GNV+S+ATTNSAG+FSILLDPLQ LLSS+ +NC++VVNTPLS+CN+ 
Sbjct: 61  VFPNAPVQLQCGAGNVISSATTNSAGLFSILLDPLQFLLSSLLTNCNLVVNTPLSTCNSG 120

Query: 121 LPSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQP 156
           LPS G L+S L L+G T QG L ITNIIP  F+F P
Sbjct: 121 LPSSGALLSPLRLIGNTLQGPLHITNIIPANFVFLP 154

[Close]
BLAST of Carg17336 vs. TrEMBL
Match: tr|A0A2N9H7J4|A0A2N9H7J4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35406 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-44
Identity = 103/155 (66.45%), Postives = 119/155 (76.77%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           M LK  LFV +MVAA   P+    A  G I  LL LTRIQGT+FCT NGNIG NGT+TP 
Sbjct: 1   MALKFFLFVSLMVAAFAIPI----AGAGLISGLLGLTRIQGTLFCTLNGNIGANGTSTPV 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNA VQLQCG GNVVS+ATTN +GVFSILLDPLQ +LSS+ ++C++VVNTPLSSCNA L
Sbjct: 61  FPNALVQLQCGAGNVVSSATTNGSGVFSILLDPLQYVLSSLLTDCNLVVNTPLSSCNAKL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQP 156
           PSVG L+S+L  +G T  GLL + NIIPTGF F P
Sbjct: 121 PSVGGLLSSLQFIGNTLIGLLNVANIIPTGFQFIP 151

[Close]
BLAST of Carg17336 vs. TrEMBL
Match: tr|A0A2N9GZ37|A0A2N9GZ37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35408 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.8e-44
Identity = 102/155 (65.81%), Postives = 119/155 (76.77%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           M LK  LFV +MVAA   P+    A  G I  L+ LTRIQGT+FCT NGNIG NGT+TP 
Sbjct: 1   MALKFFLFVSLMVAAFAIPI----AGAGLISGLIGLTRIQGTMFCTLNGNIGANGTSTPV 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNA VQLQCG GNVVS+ATTN +GVFSILLDPLQ +LSS+ ++C++VVNTPLSSCNA L
Sbjct: 61  FPNALVQLQCGAGNVVSSATTNGSGVFSILLDPLQYVLSSLLTDCNLVVNTPLSSCNAKL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQP 156
           PSVG L+S+L  +G T  GLL + NIIPTGF F P
Sbjct: 121 PSVGGLLSSLQFIGNTLIGLLNVANIIPTGFQFIP 151

[Close]
BLAST of Carg17336 vs. TrEMBL
Match: tr|A0A200PWM9|A0A200PWM9_9MAGN (Pollen Ole e 1 allergen/extensin OS=Macleaya cordata OX=56857 GN=BVC80_9091g140 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42
Identity = 99/151 (65.56%), Postives = 114/151 (75.50%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPA 60
           M  KS LFV +++AAM AP    +AQLG         RIQGT+FC+ANGN+G NGT+TP 
Sbjct: 1   MAFKSFLFVSLLIAAMAAP--QAKAQLGGXXXXXXXIRIQGTLFCSANGNMGVNGTSTPV 60

Query: 61  FPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNATL 120
           FPNA VQLQCG GNVVS+ATTNS GVFSILLDPLQ LLSS+ SNCS+VVNTPLS+CN+ L
Sbjct: 61  FPNAVVQLQCGTGNVVSSATTNSGGVFSILLDPLQSLLSSLLSNCSLVVNTPLSTCNSNL 120

Query: 121 PSVGNLVSALNLVGMTFQGLLRITNIIPTGF 152
           P+ G L S L L+G T  GLL I NIIP GF
Sbjct: 121 PTGGILTSPLQLIGKTVSGLLNIVNIIPGGF 149

[Close]
BLAST of Carg17336 vs. TrEMBL
Match: tr|A0A061EQC5|A0A061EQC5_THECC (Pollen Ole e 1 allergen and extensin family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_021233 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40
Identity = 97/158 (61.39%), Postives = 116/158 (73.42%), Query Frame = 0 

Query: 1   MGLKSVLFVFVMVAAMGAPLMVVEAQLGS-IGSLLSLTRIQGTVFCTANGNIGTNGTATP 60
           M LK++++V ++VAAM     + EAQLG  I  LL L RIQGTVFCT +GN+G NGTATP
Sbjct: 1   MALKTLMYVCLLVAAMALASPMAEAQLGGLISGLLGLIRIQGTVFCTMDGNMGVNGTATP 60

Query: 61  AFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSVTSNCSVVVNTPLSSCNAT 120
            FPNA VQLQCG GNVVS+ATTN +GVFSILLDPLQ LL S+ +NC++ V TPL    A 
Sbjct: 61  VFPNALVQLQCGAGNVVSSATTNGSGVFSILLDPLQFLLPSLLNNCNLAVKTPLXXXXAA 120

Query: 121 LPSVGNLVSALNLVGMTFQGLLRITNIIPTGFIFQPST 158
           LPSVG L+S+L  +G T  GLL I NI+P GF   PST
Sbjct: 121 LPSVGGLISSLQSLGSTLVGLLNIINIVPAGFRLLPST 158

The following BLAST results are available for this feature:
BLAST of Carg17336 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937971.11.8e-7498.73phylloplanin-like [Cucurbita moschata][more]
XP_023522114.18.9e-7498.09phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like... [more]
XP_022973793.18.3e-6486.62phylloplanin-like [Cucurbita maxima][more]
XP_002269079.16.0e-4667.95PREDICTED: phylloplanin [Vitis vinifera] >CBI22995.3 unnamed protein product, pa... [more]
XP_015899888.11.2e-4363.46phylloplanin-like [Ziziphus jujuba][more]
BLAST of Carg17336 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16660.13.3e-3060.68Pollen Ole e 1 allergen and extensin family protein[more]
AT3G16670.14.6e-2446.36Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of Carg17336 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q56S59|PHYLL_TOBAC1.0e-2042.31Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
BLAST of Carg17336 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|D7SYD8|D7SYD8_VITVI4.0e-4667.95Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g02280 PE=4 SV=... [more]
tr|A0A2N9H7J4|A0A2N9H7J4_FAGSY2.8e-4466.45Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35406 PE=4 SV=1[more]
tr|A0A2N9GZ37|A0A2N9GZ37_FAGSY4.8e-4465.81Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35408 PE=4 SV=1[more]
tr|A0A200PWM9|A0A200PWM9_9MAGN3.5e-4265.56Pollen Ole e 1 allergen/extensin OS=Macleaya cordata OX=56857 GN=BVC80_9091g140 ... [more]
tr|A0A061EQC5|A0A061EQC5_THECC1.5e-4061.39Pollen Ole e 1 allergen and extensin family protein, putative OS=Theobroma cacao... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17336-RACarg17336-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 39..118
e-value: 6.5E-7
score: 29.6
NoneNo IPR availablePANTHERPTHR34458:SF5POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 3..153
NoneNo IPR availablePANTHERPTHR34458FAMILY NOT NAMEDcoord: 3..153
IPR013783Immunoglobulin-like foldGENE3DG3DSA:2.60.40.10coord: 34..128
e-value: 2.1E-5
score: 26.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17336Cla021749Watermelon (97103) v1carwmB0603
Carg17336Csa3G154410Cucumber (Chinese Long) v2carcuB0633
Carg17336MELO3C006673Melon (DHL92) v3.5.1carmeB0610
Carg17336ClCG05G006170Watermelon (Charleston Gray)carwcgB0588
Carg17336CSPI03G14510Wild cucumber (PI 183967)carcpiB0639
Carg17336Cucsa.252990Cucumber (Gy14) v1carcgyB0681
Carg17336CmaCh06G015080Cucurbita maxima (Rimu)carcmaB0849
Carg17336CmoCh06G015040Cucurbita moschata (Rifu)carcmoB0825
Carg17336CmoCh08G012050Cucurbita moschata (Rifu)carcmoB0826
Carg17336Lsi09G014370Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17336Lsi05G015460Bottle gourd (USVL1VR-Ls)carlsiB552
Carg17336Cp4.1LG08g04990Cucurbita pepo (Zucchini)carcpeB0861
Carg17336Cp4.1LG17g00560Cucurbita pepo (Zucchini)carcpeB0859
Carg17336CsGy3G014660Cucumber (Gy14) v2carcgybB0605
Carg17336MELO3C006673.2Melon (DHL92) v3.6.1carmedB0616
Carg17336MELO3C035189.2Melon (DHL92) v3.6.1carmedB0615
Carg17336CsaV3_3G014750Cucumber (Chinese Long) v3carcucB0640
Carg17336Cla97C05G087710Watermelon (97103) v2carwmbB0631
Carg17336Bhi12G001816Wax gourdcarwgoB0720
Carg17336Bhi01G000728Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17336Carg18847Silver-seed gourdcarcarB543
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17336Silver-seed gourdcarcarB083
Carg17336Silver-seed gourdcarcarB544
Carg17336Cucurbita maxima (Rimu)carcmaB0847
Carg17336Cucurbita maxima (Rimu)carcmaB0848
Carg17336Cucurbita maxima (Rimu)carcmaB0850
Carg17336Cucurbita moschata (Rifu)carcmoB0823
Carg17336Cucurbita moschata (Rifu)carcmoB0824
Carg17336Cucurbita pepo (Zucchini)carcpeB0857
Carg17336Cucurbita pepo (Zucchini)carcpeB0860
Carg17336Melon (DHL92) v3.5.1carmeB0609
Carg17336Watermelon (Charleston Gray)carwcgB0589
Carg17336Watermelon (97103) v1carwmB0604
Carg17336Watermelon (97103) v2carwmbB0632