CsGy6G017030 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGTATCCCAAACTAAATTTCAATTTATATTCAAGGAGTACTCTTCCCAAAGTTCAATTATCTTTCCAAAGTTTGCTTCCATTACCATACAACAATAATTGATGTCTTTAACCTCTCTTTTCATTTTCTTGTTAATCTGGACGATGACATCGACAAGTTCATGTCAGCTTGATTTGATTCGAATACTTCTTGGTCCTGCTCACATCTATGGAATGCTCTATTGCACTATTGATGGGAGTGTGATCTATGGAGAGATAACTCCAACATTCCCGAGTGAGTTAAAAAAAATTCTTACAGTTTAGTTTTCATGTTACGCACGCTACTGTTTGTTTGATCTCTTACTAAAAAATGTTCTTTTTTTCTAAATTAAAAAAAGAAAGAACGGTAAACGGTAAAATTTTTAATTAATATGGAATGAACCAATCTTATAAAATTAATAAAAATTTGATGTTACATAGCTTTATCGCTTTAGTGTGTCCCTCCATTGGTTTGTTTTTCAATCAAATGTTTTCTTTTCTCATCGCTCATTATGACTAGAAAAGAAAATCGTGTTAGGACTCAAACCATTTTACAATAGATTAGTTTTACTTTTCAAATTTTTCGTTGATTTTTTTTGAATTAAACCATTCAACATTAACACGGCAATTATAATTAAGTCAACTATTTTGAATTCATGCCAACTAAAGACAAATATGAAATAATTTTAAAATTATTAAAATCACTACGTCGGATAAATTTTTTAATATCAAATGTTGGTGTTATTGTGTGTGTATATAATATATGACATGCATGTTGAAGATGCGGCGGTGCAAATGCAATGCAGAGCCGAAACGGTAGTTACGTCGGTTAAGACCGACGCCACTGGCAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCCGCCCTGCCATCGTTCAGCACCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTCATAGCATTTGAGGAAATTTCTTCTCTTGTTGCTGCTCTTACTTTTTAACTCACACTTGAATAAACGAAGCACTTGATCTCTAGAATAATGGTTTTTTGTGTTTGATTTGAAATAATTTGAGGATTTTATTTGTTGTGATGATGAACAATGATGTTGCCAATGTGTTTTTGAGCCAATAGTTTGGTTGAATTAATAATATTTGAAGGCAGCTCAAATCGCACATAAATGGTAACGAACATAATCAAATGAGATCGAGATTTATTATACTTTTTCCTATCTAAATTTGGCCTAAATAATTTCGAATACTCGAAAATTAAATGTAAA TGGTATCCCAAACTAAATTTCAATTTATATTCAAGGAGTACTCTTCCCAAAGTTCAATTATCTTTCCAAAGTTTGCTTCCATTACCATACAACAATAATTGATGTCTTTAACCTCTCTTTTCATTTTCTTGTTAATCTGGACGATGACATCGACAAGTTCATGTCAGCTTGATTTGATTCGAATACTTCTTGGTCCTGCTCACATCTATGGAATGCTCTATTGCACTATTGATGGGAGTGTGATCTATGGAGAGATAACTCCAACATTCCCGAATGCGGCGGTGCAAATGCAATGCAGAGCCGAAACGGTAGTTACGTCGGTTAAGACCGACGCCACTGGCAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCCGCCCTGCCATCGTTCAGCACCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTCATAGCATTTGAGGAAATTTCTTCTCTTGTTGCTGCTCTTACTTTTTAACTCACACTTGAATAAACGAAGCACTTGATCTCTAGAATAATGGTTTTTTGTGTTTGATTTGAAATAATTTGAGGATTTTATTTGTTGTGATGATGAACAATGATGTTGCCAATGTGTTTTTGAGCCAATAGTTTGGTTGAATTAATAATATTTGAAGGCAGCTCAAATCGCACATAAATGGTAACGAACATAATCAAATGAGATCGAGATTTATTATACTTTTTCCTATCTAAATTTGGCCTAAATAATTTCGAATACTCGAAAATTAAATGTAAA ATGTCTTTAACCTCTCTTTTCATTTTCTTGTTAATCTGGACGATGACATCGACAAGTTCATGTCAGCTTGATTTGATTCGAATACTTCTTGGTCCTGCTCACATCTATGGAATGCTCTATTGCACTATTGATGGGAGTGTGATCTATGGAGAGATAACTCCAACATTCCCGAATGCGGCGGTGCAAATGCAATGCAGAGCCGAAACGGTAGTTACGTCGGTTAAGACCGACGCCACTGGCAATTTCTCCATTTTTCTCGATGCTCCTCGATTGATGCTCCTTTATGTACTCACCAATTGCACTCTCGTTGTCACTACGCCGCTTGTCGACTGCAACGCCGCCCTGCCATCGTTCAGCACCCTCGTCTCGCCGCTGCAGCTCATTGGAAATACCTTCCATGGACTCTTCAATGTCACCAATTTCATTCCGGTAGGGTTCCGATTCGTTCATAGCATTTGA MSLTSLFIFLLIWTMTSTSSCQLDLIRILLGPAHIYGMLYCTIDGSVIYGEITPTFPNAAVQMQCRAETVVTSVKTDATGNFSIFLDAPRLMLLYVLTNCTLVVTTPLVDCNAALPSFSTLVSPLQLIGNTFHGLFNVTNFIPVGFRFVHSI
BLAST of CsGy6G017030 vs. NCBI nr
Match: XP_008458423.2 (PREDICTED: phylloplanin-like [Cucumis melo]) HSP 1 Score: 245.0 bits (624), Expect = 1.7e-61 Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CsGy6G017030 vs. NCBI nr
Match: XP_023000425.1 (phylloplanin-like [Cucurbita maxima]) HSP 1 Score: 193.0 bits (489), Expect = 7.6e-46 Identity = 103/152 (67.76%), Postives = 122/152 (80.26%), Query Frame = 0
BLAST of CsGy6G017030 vs. NCBI nr
Match: XP_022138800.1 (phylloplanin-like [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 8.7e-42 Identity = 89/140 (63.57%), Postives = 111/140 (79.29%), Query Frame = 0
BLAST of CsGy6G017030 vs. NCBI nr
Match: XP_022930243.1 (phylloplanin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 179.5 bits (454), Expect = 8.7e-42 Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CsGy6G017030 vs. NCBI nr
Match: XP_022930242.1 (uncharacterized protein LOC111436755 isoform X1 [Cucurbita moschata]) HSP 1 Score: 179.5 bits (454), Expect = 8.7e-42 Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CsGy6G017030 vs. TAIR10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 95.1 bits (235), Expect = 3.9e-20 Identity = 51/114 (44.74%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of CsGy6G017030 vs. TAIR10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 82.0 bits (201), Expect = 3.4e-16 Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of CsGy6G017030 vs. Swiss-Prot
Match: sp|Q56S59|PHYLL_TOBAC (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12 Identity = 53/151 (35.10%), Postives = 82/151 (54.30%), Query Frame = 0
BLAST of CsGy6G017030 vs. TrEMBL
Match: tr|A0A1S3C7U3|A0A1S3C7U3_CUCME (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103497845 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61 Identity = 126/152 (82.89%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of CsGy6G017030 vs. TrEMBL
Match: tr|A0A2N9H7J4|A0A2N9H7J4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35406 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.2e-24 Identity = 71/149 (47.65%), Postives = 92/149 (61.74%), Query Frame = 0
BLAST of CsGy6G017030 vs. TrEMBL
Match: tr|A0A1S4BKP1|A0A1S4BKP1_TOBAC (phylloplanin-like OS=Nicotiana tabacum OX=4097 GN=LOC107809332 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.2e-24 Identity = 70/157 (44.59%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of CsGy6G017030 vs. TrEMBL
Match: tr|A0A2N9GZ37|A0A2N9GZ37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35408 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23 Identity = 69/149 (46.31%), Postives = 92/149 (61.74%), Query Frame = 0
BLAST of CsGy6G017030 vs. TrEMBL
Match: tr|A0A2P5CLV8|A0A2P5CLV8_PARAD (Phylloplanin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142290 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 7.8e-23 Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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