Carg18776 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAATTAATTAATCGTTTATATTTCCATATTTCATCCTTCGCACGTGGAGAAGGTACGTGCGAATTCCTTTCTCGTCCATTATGCTGAATGATCTGTGCAGGTCCGGTCGCGACCAGGCAGGGGTTGCGAATGATAGTTTGCAGGTCTCTTTTCAGGTATGATTCATAAAAATGAAAAACTCTGTTTGGATTCCGAGAAAAATGCTCTACAATTCTTGTAATTCTACAAATTTCTGAGCTTATCGCTTTCGTAACAATGCTCGATGTTTGGCTCCATTTTCATCTTTTGAAACGGGATATAACCTAACATTAGTGGATGTTTTGATCAATCAAATAGTTCGAATTCAATCGATTGAGACTGAGAGGAAGTTTTGATCGATGTTACTTGAAAAATTATCAGTTAATCAGAGATATCTAAGCTCAATCCATGGATTGAAAGTTTCGCTCTCTTTATAAGATTCTCTGTTTGCCTGTATTTAATCTGCTGTGCTGCTTTTGTAGAGTCGACCGTCTCTTGAAATGTACAAGTCCGTATATGTCATATAGCAGCTCGTAATCTAGCTCTGAAGCTCATTATATTAACGATTAATTTGAAGTTGGAATGATTTTCTATTAAAAATATGAACGAATTATTGAATATACCATAACTTATCTACTTTGAGTTCAGTTGTTTAGTCGTGATTTAACAATAGATTATCTTCAAGTGAGAGGAAGGGTAGGTCAAGGATATGATTAGATATGCCTTACTTATCAGCTTAAGCTTTAGAGTTGAATAGTAATTTAACACGATCTGAGCCTGAATTTGGATGTTGAAATGATGTTCTTAGTAATAAACTGGTGGTGGACTAGCTTCTAATCCTTATAAAACTGAGTTCTATTCCAATGCGTCAGGGACTCTATGCTGATGACGGTTGGAGCCTGAAGGCGAATATGACTGGTAAAAAGGAATTCTGGAGTGCTGCTGACCAGAAGAAAAAGCCCAAAACAGTCAGCCAAACATGGAGACCTGTGTACATGCACGCCAGCCCTTCTGAGGGTATGTGGAATTTATATTACAATAGCATATAACTGTAGCCGTGCAGTTTGGGAATTGACAAATCAATATTTATAACCTAAACATTTCATCTAATGGTACTTATGTTTAAGTTGTGGAACAAGGAGTGAGTTGAGGCTGCTTCTGAAGTTCTGAGAGTGATTATACTTACTAACTGGACACTTGTTGTGAGATCCTACCTCGATTGGAGAGGGGAACGAGTGC ATTAATTAATTAATCGTTTATATTTCCATATTTCATCCTTCGCACGTGGAGAAGGTACGTGCGAATTCCTTTCTCGTCCATTATGCTGAATGATCTGTGCAGGTCCGGTCGCGACCAGGCAGGGGTTGCGAATGATAGTTTGCAGGTCTCTTTTCAGGGACTCTATGCTGATGACGGTTGGAGCCTGAAGGCGAATATGACTGGTAAAAAGGAATTCTGGAGTGCTGCTGACCAGAAGAAAAAGCCCAAAACAGTCAGCCAAACATGGAGACCTGTGTACATGCACGCCAGCCCTTCTGAGGGTATGTGGAATTTATATTACAATAGCATATAACTGTAGCCGTGCAGTTTGGGAATTGACAAATCAATATTTATAACCTAAACATTTCATCTAATGGTACTTATGTTTAAGTTGTGGAACAAGGAGTGAGTTGAGGCTGCTTCTGAAGTTCTGAGAGTGATTATACTTACTAACTGGACACTTGTTGTGAGATCCTACCTCGATTGGAGAGGGGAACGAGTGC ATGCTGAATGATCTGTGCAGGTCCGGTCGCGACCAGGCAGGGGTTGCGAATGATAGTTTGCAGGTCTCTTTTCAGGGACTCTATGCTGATGACGGTTGGAGCCTGAAGGCGAATATGACTGGTAAAAAGGAATTCTGGAGTGCTGCTGACCAGAAGAAAAAGCCCAAAACAGTCAGCCAAACATGGAGACCTGTGTACATGCACGCCAGCCCTTCTGAGGGTATGTGGAATTTATATTACAATAGCATATAA MLNDLCRSGRDQAGVANDSLQVSFQGLYADDGWSLKANMTGKKEFWSAADQKKKPKTVSQTWRPVYMHASPSEGMWNLYYNSI
BLAST of Carg18776 vs. NCBI nr
Match: XP_022149236.1 (uncharacterized protein LOC111017681 isoform X3 [Momordica charantia]) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17 Identity = 49/70 (70.00%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of Carg18776 vs. NCBI nr
Match: XP_022954065.1 (uncharacterized protein LOC111456441 isoform X2 [Cucurbita moschata]) HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17 Identity = 47/65 (72.31%), Postives = 52/65 (80.00%), Query Frame = 0
BLAST of Carg18776 vs. NCBI nr
Match: XP_023549271.1 (activating signal cointegrator 1 complex subunit 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 0
BLAST of Carg18776 vs. NCBI nr
Match: KGN45394.1 (hypothetical protein Csa_7G447090 [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 3.3e-11 Identity = 44/90 (48.89%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Carg18776 vs. NCBI nr
Match: XP_004141755.1 (PREDICTED: activating signal cointegrator 1 complex subunit 1 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 9.6e-11 Identity = 36/50 (72.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Carg18776 vs. TrEMBL
Match: tr|A0A0A0K963|A0A0A0K963_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447090 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-11 Identity = 44/90 (48.89%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Carg18776 vs. TrEMBL
Match: tr|A0A1S3CGC2|A0A1S3CGC2_CUCME (activating signal cointegrator 1 complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103500600 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-10 Identity = 35/50 (70.00%), Postives = 38/50 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |