Carg18416 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18416
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	FAM210B-like protein
Location	Cucurbita_argyrosperma_scaffold_161 : 136852 .. 138256 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATATCTGGCTTACAACGCTTCACATAAAATTCTGTTTCTCTTTGATCTCGTGGGATTCTCGTTTCCCATCCTCCGAATTCAGAGGGCATGCCTCATTACTAGATTCCGACCTCTGATTTTCTGATAATGGCGACTGCTCCTTCTCCAATTTGCCTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGGTACCATTCTCTTCGTTCCTTTTCCTCCATCAATCTGCTATGAACTTGAACGGAAGATAGAAGTTAGAAGACTGATAGCATACATTTTAATTACGAATTTACCTTAGGAAGCAAATTTTGCAGTCTATTTATGCCTGATTGTTGTTGTGGCAAAGAATAACATATTGATTTTCTGTTTCAATTGTTCATATTATGTTCAGCCAAAAAGTTCAATGGACTAGAACATAATTTGTAGTGATAATGTATGTACTTGCTATCAATACCTCCTCACGATTTGAAAGTAGTAAAGAAGAAAGAAGTCTCAATTGTTCATATCTCTGCCTTGCATACTGCTAAGATCAATGCCAAAGAATAATGGGTGGTTATCCTTTCCTGGTAACAGCAAATGAGAAATTCATGTTGGTATGCAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAATGGTATTTAGGAAGGGTTCCATGAGTTTGTTTGATCTTGATCTTGATCAAATATGTTTCACAAAGGGAGATTGGTTTTGTTTGTAACACTTGAAAATTTGCAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAGCATAACTCTCTGTATTAGTCATTTGTTAGAGGTTTATCTAAGATATTATTTTATTTGATAGTGTATATTCAGCTAAATCCCATATAGATTGCATACTAAATCCCATATAGATGGGCGTTTTATTTGGAAGTTAATAAAATGGTTAAAAGAGTTTCAATTTCTT

mRNA sequence

AAATATCTGGCTTACAACGCTTCACATAAAATTCTGTTTCTCTTTGATCTCGTGGGATTCTCGTTTCCCATCCTCCGAATTCAGAGGGCATGCCTCATTACTAGATTCCGACCTCTGATTTTCTGATAATGGCGACTGCTCCTTCTCCAATTTGCCTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAGCATAACTCTCTGTATTAGTCATTTGTTAGAGGTTTATCTAAGATATTATTTTATTTGATAGTGTATATTCAGCTAAATCCCATATAGATTGCATACTAAATCCCATATAGATGGGCGTTTTATTTGGAAGTTAATAAAATGGTTAAAAGAGTTTCAATTTCTT

Coding sequence (CDS)

ATGGCGACTGCTCCTTCTCCAATTTGCCTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGATACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATCGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGCGTGTTACGCGCTCATCAGCGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGTAGGAATTTCGGTTGATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTCCCTCCAACAGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAAGTAGAGGAAGAGAATTAG

Protein sequence

MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEEN

Homology

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BLAST of Carg18416 vs. NCBI nr
Match: XP_022943302.1 (uncharacterized protein LOC111448115 [Cucurbita moschata] >XP_022986434.1 uncharacterized protein LOC111484182 [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 2.0e-99
Identity = 196/198 (98.99%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS
Sbjct: 1   MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV
Sbjct: 121 TLSLISFAVCYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALTSVVATWIGKKVEEEN
Sbjct: 181 ALTSVVATWIGKKVEEEN 198

[Close]

BLAST of Carg18416 vs. NCBI nr
Match: XP_023512163.1 (uncharacterized protein LOC111776967 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 5.9e-99
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MATAPSPIC SSSFISSPASFPDTNFRFPFSSSV+PPKFNPKRLRVQALKEKTGEIERPS
Sbjct: 1   MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVQPPKFNPKRLRVQALKEKTGEIERPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISFA CYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV
Sbjct: 121 TLSLISFAVCYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALTSVVATWIGKKVEEEN
Sbjct: 181 ALTSVVATWIGKKVEEEN 198

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BLAST of Carg18416 vs. NCBI nr
Match: XP_004140165.1 (PREDICTED: uncharacterized protein LOC101219558 [Cucumis sativus] >KGN48043.1 hypothetical protein Csa_6G425800 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 6.8e-71
Identity = 158/198 (79.80%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MA A S I  SS   SS  SF   NFRF F+    P KFN K  RVQALK+KTGEIERPS
Sbjct: 1   MAIASSLIAFSS---SSNISFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIERPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PS---SSSSADEVTKKYGLEAGLWKIFSSKEEGEGTNKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISF+ CYALISAGVDVQ LLQKVGIS+D  GEKVGTFALAYAAHKA SPIRFPPTV
Sbjct: 121 TLSLISFSLCYALISAGVDVQVLLQKVGISIDETGEKVGTFALAYAAHKAASPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALT +VA+WIGKKVE+EN
Sbjct: 181 ALTPIVASWIGKKVEKEN 192

[Close]

BLAST of Carg18416 vs. NCBI nr
Match: XP_008449587.1 (PREDICTED: uncharacterized protein LOC103491427 [Cucumis melo])

HSP 1 Score: 273.1 bits (697), Expect = 7.5e-70
Identity = 157/198 (79.29%), Postives = 165/198 (83.33%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MATA S I  SS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPS
Sbjct: 1   MATASSLIAFSS---FSNFSFTHPNFRFHFNFPNPPLKFNSKSFRVQALKQKTGEIDRPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PS---SSSSADEVTKKYGLEAGLWKIFSSKEEGEGTNKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISF+ CYALISAGVDVQALLQKVGIS D  G KVGTFALAYAAHKA SPIRFPPTV
Sbjct: 121 TLSLISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALT +VA+WIGKKVE+EN
Sbjct: 181 ALTPIVASWIGKKVEKEN 192

[Close]

BLAST of Carg18416 vs. NCBI nr
Match: XP_022152952.1 (uncharacterized protein LOC111020570 isoform X1 [Momordica charantia])

HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 153/197 (77.66%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 6   SPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPK--RLRVQALKEKTGEIERPSPSQ 65
           S IC SS FISSPASF D NFRF   S  R PKFN +  R RV+ALKEKTGEIERPSP  
Sbjct: 3   SLICFSSCFISSPASFADGNFRFHLKSPNRSPKFNSERFRFRVKALKEKTGEIERPSP-- 62

Query: 66  SPSSSSADEVTKKYGLEAGLWKIFSSKEEGE---GKDKSKGDQAKELLAKYGGAYLATSI 125
                  DEVTKKYGLEAGLWKIFSSKEEGE   GK KSKG+QAKELLAKYGGAYLATSI
Sbjct: 63  -------DEVTKKYGLEAGLWKIFSSKEEGEGDVGKGKSKGEQAKELLAKYGGAYLATSI 122

Query: 126 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 185
           TLSLISF+ CYALISAG+DVQALLQKVGIS +  GEKVGTFALAYAAHKA SPIRFPPTV
Sbjct: 123 TLSLISFSLCYALISAGIDVQALLQKVGISANETGEKVGTFALAYAAHKAASPIRFPPTV 182

Query: 186 ALTSVVATWIGKKVEEE 198
           ALT +VA+WIGKKVE++
Sbjct: 183 ALTPIVASWIGKKVEKQ 190

[Close]

BLAST of Carg18416 vs. TAIR10
Match: AT2G27290.1 (Protein of unknown function (DUF1279))

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 109/176 (61.93%), Postives = 128/176 (72.73%), Query Frame = 0


Query: 30  FSSSVRPPKFNPKRLRVQALKEKTGEIERP-SP-SQSPSSSSADEVTKKYGLEAGLWKIF 89
           F SSV     + K+ R +A++EK  +I++  SP              KKYGLE GLWKI 
Sbjct: 25  FHSSV---SASSKKFRCRAVREKAEDIDKNISPXXXXXXXXXXXXXXKKYGLEVGLWKIL 84

Query: 90  SSKEEGEGKD------KSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQ 149
           SSK++ EG D      KSK D+AKELLAKYGGAYLATSITLSLISF+ CY L+++GVDVQ
Sbjct: 85  SSKDD-EGSDGDNKKKKSKTDEAKELLAKYGGAYLATSITLSLISFSLCYVLVTSGVDVQ 144

Query: 150 ALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEE 198
           ALL KVGIS +  GEKVG FALAYAAHKA SPIRFPPTVALT +VA WIGKKV++E
Sbjct: 145 ALLLKVGISTNETGEKVGAFALAYAAHKAASPIRFPPTVALTPIVANWIGKKVDKE 196

[Close]

BLAST of Carg18416 vs. Swiss-Prot
Match: sp|Q96KR6|F210B_HUMAN (Protein FAM210B, mitochondrial OS=Homo sapiens OX=9606 GN=FAM210B PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 94  EGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVDG 153
           E K +SK  Q K++  +YG   ++  I +SLIS    Y ++S+GVD+ A+L K+G     
Sbjct: 79  EEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESL 138

Query: 154 NGEKV----GTFALAYAAHKATSPIRFPPTVALTSVVATWIGK 193
              K+     TF +AYA HK  +P+R   T+    ++  +  K
Sbjct: 139 VQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFRK 181

[Close]

BLAST of Carg18416 vs. Swiss-Prot
Match: sp|Q9D8B6|F210B_MOUSE (Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-05
Identity = 32/97 (32.99%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 93  GEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGISVD 152
           G  K  S+  Q K++  +YG   ++  I +SL+S    Y ++S+G+D+ A+L K+G    
Sbjct: 76  GTEKKLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLGFKES 135

Query: 153 GNGEKV----GTFALAYAAHKATSPIRFPPTVALTSV 186
               K+     TF +AYA HK  +P+R   ++ L SV
Sbjct: 136 LVQSKMAAGTSTFVVAYAIHKLFAPVRI--SITLVSV 170

[Close]

BLAST of Carg18416 vs. TrEMBL
Match: tr|A0A0A0KEW3|A0A0A0KEW3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425800 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.5e-71
Identity = 158/198 (79.80%), Postives = 166/198 (83.84%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MA A S I  SS   SS  SF   NFRF F+    P KFN K  RVQALK+KTGEIERPS
Sbjct: 1   MAIASSLIAFSS---SSNISFTHPNFRFHFNFPNPPLKFNSKPFRVQALKQKTGEIERPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PS---SSSSADEVTKKYGLEAGLWKIFSSKEEGEGTNKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISF+ CYALISAGVDVQ LLQKVGIS+D  GEKVGTFALAYAAHKA SPIRFPPTV
Sbjct: 121 TLSLISFSLCYALISAGVDVQVLLQKVGISIDETGEKVGTFALAYAAHKAASPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALT +VA+WIGKKVE+EN
Sbjct: 181 ALTPIVASWIGKKVEKEN 192

[Close]

BLAST of Carg18416 vs. TrEMBL
Match: tr|A0A1S3BN10|A0A1S3BN10_CUCME (uncharacterized protein LOC103491427 OS=Cucumis melo OX=3656 GN=LOC103491427 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 5.0e-70
Identity = 157/198 (79.29%), Postives = 165/198 (83.33%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MATA S I  SS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPS
Sbjct: 1   MATASSLIAFSS---FSNFSFTHPNFRFHFNFPNPPLKFNSKSFRVQALKQKTGEIDRPS 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAKYGGAYLATSI 120
           PS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSKGDQAKELLAKYGGAYLATSI
Sbjct: 61  PS---SSSSADEVTKKYGLEAGLWKIFSSKEEGEGTNKSKGDQAKELLAKYGGAYLATSI 120

Query: 121 TLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTV 180
           TLSLISF+ CYALISAGVDVQALLQKVGIS D  G KVGTFALAYAAHKA SPIRFPPTV
Sbjct: 121 TLSLISFSLCYALISAGVDVQALLQKVGISTDETGGKVGTFALAYAAHKAASPIRFPPTV 180

Query: 181 ALTSVVATWIGKKVEEEN 199
           ALT +VA+WIGKKVE+EN
Sbjct: 181 ALTPIVASWIGKKVEKEN 192

[Close]

BLAST of Carg18416 vs. TrEMBL
Match: tr|A0A2P4LRJ7|A0A2P4LRJ7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_27485 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.5e-58
Identity = 138/201 (68.66%), Postives = 155/201 (77.11%), Query Frame = 0


Query: 1   MATAPSPICLSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPS 60
           MATA   + L+   + S + F     R    +S+ P K N KR RV+ LKEKT EI+ P 
Sbjct: 1   MATAMLSLSLT---LPSASFFNKGQLRIRNFASIPPSKSNFKRFRVRTLKEKTEEIKTP- 60

Query: 61  PSQSPSSSSADEVTKKYGLEAGLWKIFSSKEE---GEGKDKSKGDQAKELLAKYGGAYLA 120
              S SS SA+E+TKKYGLEAGLWKIFSSKEE   G+ K KSKGDQAKELL KYGGAYLA
Sbjct: 61  ---SSSSGSAEEITKKYGLEAGLWKIFSSKEEEKGGDEKTKSKGDQAKELLTKYGGAYLA 120

Query: 121 TSITLSLISFAACYALISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFP 180
           TSI LSLISFA CY+LI+AGVDVQ+LLQKVGISVD  GEKVGTFALAYAAHKA SPIRFP
Sbjct: 121 TSIVLSLISFALCYSLINAGVDVQSLLQKVGISVDATGEKVGTFALAYAAHKAASPIRFP 180

Query: 181 PTVALTSVVATWIGKKVEEEN 199
           PTVALT +VA WIGKKVE++N
Sbjct: 181 PTVALTPIVARWIGKKVEKQN 194

[Close]

BLAST of Carg18416 vs. TrEMBL
Match: tr|A0A061GVY6|A0A061GVY6_THECC (Transmembrane protein C20orf108 OS=Theobroma cacao OX=3641 GN=TCM_041293 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 9.7e-58
Identity = 131/168 (77.98%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 30  FSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSS 89
           F+S+    K   K  R++A+KEKT EI+ PS     SSSSADEVTK YGLEAGLWKIFSS
Sbjct: 29  FTSTPTSIKPKLKSFRIRAVKEKTEEIQTPS-----SSSSADEVTKTYGLEAGLWKIFSS 88

Query: 90  KEEGEGKDKSKGDQAKELLAKYGGAYLATSITLSLISFAACYALISAGVDVQALLQKVGI 149
           KEEGE K KSKGDQAKELLAKYGGAYLATSITLSLISFA CYALISAG+DVQALL KVGI
Sbjct: 89  KEEGEEK-KSKGDQAKELLAKYGGAYLATSITLSLISFALCYALISAGIDVQALLLKVGI 148

Query: 150 SVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKVEEE 198
           S D  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA+WIGKKVE++
Sbjct: 149 STDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVASWIGKKVEKD 190

[Close]

BLAST of Carg18416 vs. TrEMBL
Match: tr|A0A059AAP5|A0A059AAP5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00538 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.7e-57
Identity = 134/184 (72.83%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 16  SSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTK 75
           SSP    D  +RF F+ S RP K N  R+ V+AL+E+T E   P    SPSS+SADEVTK
Sbjct: 13  SSPRLRRD-GYRF-FAPSPRPCKPNSSRVAVRALREETKEARNP----SPSSASADEVTK 72

Query: 76  KYGLEAGLWKIFSSKEEGEGKD--KSKGDQAKELLAKYGGAYLATSITLSLISFAACYAL 135
           KYGLEAGLW+IFSSKEE +G D  KSK DQAKELLAKYGGAYLATSITLSLISF+ CY L
Sbjct: 73  KYGLEAGLWQIFSSKEEQKGDDEKKSKTDQAKELLAKYGGAYLATSITLSLISFSLCYVL 132

Query: 136 ISAGVDVQALLQKVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKK 195
           ISAG+DVQALLQ+VGIS+D  GEKVGTFALAYAAHKA SPIRFPPTVALT +VA WIGKK
Sbjct: 133 ISAGIDVQALLQRVGISLDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKK 190

Query: 196 VEEE 198
           V++E
Sbjct: 193 VDKE 190

The following BLAST results are available for this feature:

BLAST of Carg18416 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943302.1	2.0e-99	98.99	uncharacterized protein LOC111448115 [Cucurbita moschata] >XP_022986434.1 unchar...	[more]
XP_023512163.1	5.9e-99	98.48	uncharacterized protein LOC111776967 [Cucurbita pepo subsp. pepo]	[more]
XP_004140165.1	6.8e-71	79.80	PREDICTED: uncharacterized protein LOC101219558 [Cucumis sativus] >KGN48043.1 hy...	[more]
XP_008449587.1	7.5e-70	79.29	PREDICTED: uncharacterized protein LOC103491427 [Cucumis melo]	[more]
XP_022152952.1	6.3e-69	77.66	uncharacterized protein LOC111020570 isoform X1 [Momordica charantia]	[more]

BLAST of Carg18416 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27290.1	1.2e-45	61.93	Protein of unknown function (DUF1279)	[more]

BLAST of Carg18416 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q96KR6\|F210B_HUMAN	2.3e-06	33.01	Protein FAM210B, mitochondrial OS=Homo sapiens OX=9606 GN=FAM210B PE=1 SV=2	[more]
sp\|Q9D8B6\|F210B_MOUSE	4.4e-05	32.99	Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3	[more]

BLAST of Carg18416 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KEW3\|A0A0A0KEW3_CUCSA	4.5e-71	79.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425800 PE=4 SV=1	[more]
tr\|A0A1S3BN10\|A0A1S3BN10_CUCME	5.0e-70	79.29	uncharacterized protein LOC103491427 OS=Cucumis melo OX=3656 GN=LOC103491427 PE=...	[more]
tr\|A0A2P4LRJ7\|A0A2P4LRJ7_QUESU	1.5e-58	68.66	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_27485 PE=4 SV=1	[more]
tr\|A0A061GVY6\|A0A061GVY6_THECC	9.7e-58	77.98	Transmembrane protein C20orf108 OS=Theobroma cacao OX=3641 GN=TCM_041293 PE=4 SV...	[more]
tr\|A0A059AAP5\|A0A059AAP5_EUCGR	3.7e-57	72.83	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00538 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009688	DUF1279

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18416-RA	Carg18416-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009688	Domain of unknown function DUF1279	PFAM	PF06916	DUF1279	coord: 103..184 e-value: 8.3E-22 score: 77.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71
None	No IPR available	PANTHER	PTHR21377:SF10	SUBFAMILY NOT NAMED	coord: 23..198
None	No IPR available	PANTHER	PTHR21377	UNCHARACTERIZED	coord: 23..198

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18416	Cla008625	Watermelon (97103) v1	carwmB0413
Carg18416	Csa6G425800	Cucumber (Chinese Long) v2	carcuB0445
Carg18416	MELO3C014513	Melon (DHL92) v3.5.1	carmeB0423
Carg18416	ClCG02G022370	Watermelon (Charleston Gray)	carwcgB0409
Carg18416	CSPI06G23360	Wild cucumber (PI 183967)	carcpiB0450
Carg18416	Cucsa.185840	Cucumber (Gy14) v1	carcgyB0480
Carg18416	CmaCh20G001540	Cucurbita maxima (Rimu)	carcmaB0575
Carg18416	CmoCh20G001700	Cucurbita moschata (Rifu)	carcmoB0559
Carg18416	Lsi10G011430	Bottle gourd (USVL1VR-Ls)	carlsiB375
Carg18416	Cp4.1LG16g08040	Cucurbita pepo (Zucchini)	carcpeB0579
Carg18416	CsGy6G022610	Cucumber (Gy14) v2	carcgybB0421
Carg18416	MELO3C014513.2	Melon (DHL92) v3.6.1	carmedB0426
Carg18416	CsaV3_6G038500	Cucumber (Chinese Long) v3	carcucB0446
Carg18416	Cla97C02G048460	Watermelon (97103) v2	carwmbB0439
Carg18416	Bhi10G000137	Wax gourd	carwgoB0501

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18416	Silver-seed gourd	carcarB289
Carg18416	Silver-seed gourd	carcarB433
Carg18416	Cucumber (Gy14) v1	carcgyB0481
Carg18416	Cucurbita maxima (Rimu)	carcmaB0576
Carg18416	Cucurbita maxima (Rimu)	carcmaB0578
Carg18416	Cucurbita moschata (Rifu)	carcmoB0557
Carg18416	Cucurbita moschata (Rifu)	carcmoB0560
Carg18416	Cucurbita moschata (Rifu)	carcmoB0562
Carg18416	Cucurbita pepo (Zucchini)	carcpeB0580
Carg18416	Cucurbita pepo (Zucchini)	carcpeB0582
Carg18416	Cucurbita pepo (Zucchini)	carcpeB0583
Carg18416	Cucurbita pepo (Zucchini)	carcpeB0584
Carg18416	Wild cucumber (PI 183967)	carcpiB0449
Carg18416	Cucumber (Chinese Long) v2	carcuB0444
Carg18416	Cucumber (Chinese Long) v3	carcucB0445
Carg18416	Bottle gourd (USVL1VR-Ls)	carlsiB378
Carg18416	Melon (DHL92) v3.5.1	carmeB0422
Carg18416	Melon (DHL92) v3.6.1	carmedB0425
Carg18416	Watermelon (Charleston Gray)	carwcgB0407
Carg18416	Watermelon (97103) v1	carwmB0411
Carg18416	Watermelon (97103) v2	carwmbB0437