Carg18232 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATCAAACAAACGGCAAGGAAATCAAAGCCATACCCCCAAAAGAAAGAGTAATCATTACTGTTTATGTTGAATCTCCCAGAAAACAGAGCAATAAGTCCCATCAAAACCCCATTTCCATTAACAAAAACTCTCATCCAAATGCTCATCCCAAAGCCCCTAAATCCAGAGGCTACGATCGTCGGGCTGAGCTTCTTGCGTATTCTCGGGAGCTCAGAAATGTGGATTCTGCTACGACCCACTTGCCCAAAACTAAATCCAAATGGAGGGTGAAATCGGAGACGGCGGCGGTACGGCGACTTCCGTCGAGACGGGGGTTGCGGCAGGGGAGATATGAACGGGTTGGGATGATGAGGGAAGAGAGAACAGAGGTGGTGGAACAGAGATGCTTGCCCAAGTGCTTCAATGGAGATTACAAGAGAAGCAGTGGCCGATTGGGATCTTCCATATTAGTAAATTTCACATTGCATTGAATCGTGTTTTTATTGTTTGTTTGTTTGTTTGTTTAGTATGTTGATTAATGTGTTTGTGTTATCAGAGGAAATTGAAGAGTTTGATGGGAGGGTTATCAAAGGGCTGCAAACGCGGTGGTTGGTGATGGTTAAGAACAGAAATGGTGGAATGAGATCCGCCATTTGTGTTGAGTTC ATGGAAGATCAAACAAACGGCAAGGAAATCAAAGCCATACCCCCAAAAGAAAGAGTAATCATTACTGTTTATGTTGAATCTCCCAGAAAACAGAGCAATAAGTCCCATCAAAACCCCATTTCCATTAACAAAAACTCTCATCCAAATGCTCATCCCAAAGCCCCTAAATCCAGAGGCTACGATCGTCGGGCTGAGCTTCTTGCGTATTCTCGGGAGCTCAGAAATGTGGATTCTGCTACGACCCACTTGCCCAAAACTAAATCCAAATGGAGGGTGAAATCGGAGACGGCGGCGGTACGGCGACTTCCGTCGAGACGGGGGTTGCGGCAGGGGAGATATGAACGGGTTGGGATGATGAGGGAAGAGAGAACAGAGGTGGTGGAACAGAGATGCTTGCCCAAGTGCTTCAATGGAGATTACAAGAGAAGCAGTGGCCGATTGGGATCTTCCATATTAAGGAAATTGAAGAGTTTGATGGGAGGGTTATCAAAGGGCTGCAAACGCGGTGGTTGGTGATGGTTAAGAACAGAAATGGTGGAATGAGATCCGCCATTTGTGTTGAGTTC ATGGAAGATCAAACAAACGGCAAGGAAATCAAAGCCATACCCCCAAAAGAAAGAGTAATCATTACTGTTTATGTTGAATCTCCCAGAAAACAGAGCAATAAGTCCCATCAAAACCCCATTTCCATTAACAAAAACTCTCATCCAAATGCTCATCCCAAAGCCCCTAAATCCAGAGGCTACGATCGTCGGGCTGAGCTTCTTGCGTATTCTCGGGAGCTCAGAAATGTGGATTCTGCTACGACCCACTTGCCCAAAACTAAATCCAAATGGAGGGTGAAATCGGAGACGGCGGCGGTACGGCGACTTCCGTCGAGACGGGGGTTGCGGCAGGGGAGATATGAACGGGTTGGGATGATGAGGGAAGAGAGAACAGAGGTGGTGGAACAGAGATGCTTGCCCAAGTGCTTCAATGGAGATTACAAGAGAAGCAGTGGCCGATTGGGATCTTCCATATTAAGGAAATTGAAGAGTTTGATGGGAGGGTTATCAAAGGGCTGCAAACGCGGTGGTTGGTGA MEDQTNGKEIKAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGYDRRAELLAYSRELRNVDSATTHLPKTKSKWRVKSETAAVRRLPSRRGLRQGRYERVGMMREERTEVVEQRCLPKCFNGDYKRSSGRLGSSILRKLKSLMGGLSKGCKRGGW
BLAST of Carg18232 vs. NCBI nr
Match: XP_022962296.1 (uncharacterized protein LOC111462789 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 4.0e-88 Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0
BLAST of Carg18232 vs. NCBI nr
Match: XP_023546181.1 (uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 326.2 bits (835), Expect = 6.4e-86 Identity = 165/171 (96.49%), Postives = 167/171 (97.66%), Query Frame = 0
BLAST of Carg18232 vs. NCBI nr
Match: XP_022990178.1 (uncharacterized protein LOC111487148 [Cucurbita maxima]) HSP 1 Score: 324.3 bits (830), Expect = 2.4e-85 Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0
BLAST of Carg18232 vs. NCBI nr
Match: XP_008460454.1 (PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo]) HSP 1 Score: 164.9 bits (416), Expect = 2.5e-37 Identity = 99/177 (55.93%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of Carg18232 vs. NCBI nr
Match: XP_004140323.1 (PREDICTED: uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical protein Csa_5G385350 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 7.5e-34 Identity = 95/177 (53.67%), Postives = 113/177 (63.84%), Query Frame = 0
BLAST of Carg18232 vs. TrEMBL
Match: tr|A0A1S3CDS3|A0A1S3CDS3_CUCME (uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37 Identity = 99/177 (55.93%), Postives = 120/177 (67.80%), Query Frame = 0
BLAST of Carg18232 vs. TrEMBL
Match: tr|A0A0A0KN34|A0A0A0KN34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.9e-34 Identity = 95/177 (53.67%), Postives = 113/177 (63.84%), Query Frame = 0
BLAST of Carg18232 vs. TrEMBL
Match: tr|B9RJB0|B9RJB0_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1032810 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 69/194 (35.57%), Postives = 90/194 (46.39%), Query Frame = 0
BLAST of Carg18232 vs. TrEMBL
Match: tr|A0A199UAS0|A0A199UAS0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S076900 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.9e-07 Identity = 68/176 (38.64%), Postives = 88/176 (50.00%), Query Frame = 0
BLAST of Carg18232 vs. TrEMBL
Match: tr|A0A2P4KRM4|A0A2P4KRM4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_32743 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.8e-07 Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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