Carg18011 (gene) Silver-seed gourd

Overview
NameCarg18011
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Description60S ribosomal protein L30
LocationCucurbita_argyrosperma_scaffold_171 : 383621 .. 385325 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGGAAAAACAGTTGGGCGCTCTATATATATTCTTAGATTAGGGTTTCTGGTTGTAACCCTTTCGGCGTCGATCGGCAGCTTTCTCTACTTCCACCATGGTTGCCGCGAAGAAGACCGTGAGTTTCTCATCCCTTTCCCGCCCATTTCTTCCTCTTCGGCTTATTGCTGGGATTGGTTTCTATGTTTCGCATTTGATTTTGTTTAGGAACGAAGGAATAGCTGGCGGATTTAGGTTTTTCTCCTCCGTCGTTTTTGTTTTGGAGAGGTCTGACATTTTTTCTGTTGTGAAAATTTCACAGAAGAAGACTCATGAGAGTATCAACAATAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTTCTCAAGACCTTGAGGAGCTCTAAAGGTATTCTATTCACTAAGATTTCATATTTGCGCTACTGATCTGATCTCTGGACTTTGCCTCAGTGTATGTTTGTTCGTTGTTAATCCAGTTCAGTAGGCATTTTATTATTTTTTTTTTCACGGTTGACATTCGGTTGATTTTCAGCCGTCCAGTTATTATAGTTAGGAATAGTTTTCAATGAAATTACTGAAACTTTCGAATCAAAGGTTGTTACCTACAGCATTAAAAGCATTGACAGGATTTTCTTTTTATTATTGTCATTGGCCTAATCCTTCATCCAATAGTTTATTCGAGTTACTAAGGTTGATATCCCCTTGATTGACATTACTACGTTCACGTATTATTCTTTGAGAAGTAAAGGGATTCGTAGTGTCTTATTTGTTATCCATCTTTTGGTAAAGCCTTTTCATACGAGGTTATATATTATGTTCTTTTTGTTTGCAGGTAAGCTGATCATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCAGAGATTGAGTATTATGCGATGTTGGCTAAGGTTGGAGTTCACCATTACAACGGAAGTACGTTCCTAGCCCTTTTAATTAAGAATTAGCTTGTTTTTCGGCACTGCATTTTAGTTTATCGTATTATCAGTTTACGAGAATGTATTGCCTACTCATGTGTTGGCTAATTATGGGTTGTGAACTTCATAAAATTGAGGTAGAATCGTTAGATTTCTGAATGAACTTTCCCTTGACTTAAGCACTTGTCTCTACACATCCCGACTATGTCCAAGCTTTTTGATTGCTGATCCTCATTATTGGTTTATCTCTTATTCTGCATAAGAAGTTTGATTATGGGATGCAATTGATTTTCCAGAAGACTCACTGTGAGCAAATATCTCTCTTGAATGTTGTCAGGCAATGTAGATCTTGGAACTGCATGTGGAAAGTATTACAGAGTATGCTGCCTCAGTATTATCGATCCTGGTATACAGTTTTCTCTGATCAAAACTAAAATTTTGGGTGACTTCCTTGCTTAATGGTTCTGATCTTGAGTTTGGAATTATTTTCAGGCGATTCTGATATCATCAAGAGCATTCCCGGAGACAGTTAGTTTGCAACTTCCTCTCAGATCATAGATTTTTGTTTCAGAGTTTCTTTTTCAATCCATTTAATTTTGGGGTGAACATAGTGATGTGTTCCGCTTGCGAAGCATGTTATTATCGATCGAATGGTTTCAATATAAACTTTTTATGTATGCCAGATCTTATTCCAGAATACTTGTTATATTATCTTGATGTTCCACACTACCCCTAACCGATTCCAAGC

mRNA sequence

AAAAAGGAAAAACAGTTGGGCGCTCTATATATATTCTTAGATTAGGGTTTCTGGTTGTAACCCTTTCGGCGTCGATCGGCAGCTTTCTCTACTTCCACCATGGTTGCCGCGAAGAAGACCAAGAAGACTCATGAGAGTATCAACAATAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTTCTCAAGACCTTGAGGAGCTCTAAAGGTAAGCTGATCATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCAGAGATTGAGTATTATGCGATGTTGGCTAAGGTTGGAGTTCACCATTACAACGGAAGCAATGTAGATCTTGGAACTGCATGTGGAAAGTATTACAGAGTATGCTGCCTCAGTATTATCGATCCTGGCGATTCTGATATCATCAAGAGCATTCCCGGAGACAGTTAGTTTGCAACTTCCTCTCAGATCATAGATTTTTGTTTCAGAGTTTCTTTTTCAATCCATTTAATTTTGGGGTGAACATAGTGATGTGTTCCGCTTGCGAAGCATGTTATTATCGATCGAATGGTTTCAATATAAACTTTTTATGTATGCCAGATCTTATTCCAGAATACTTGTTATATTATCTTGATGTTCCACACTACCCCTAACCGATTCCAAGC

Coding sequence (CDS)

ATGGTTGCCGCGAAGAAGACCAAGAAGACTCATGAGAGTATCAACAATAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTTCTCAAGACCTTGAGGAGCTCTAAAGGTAAGCTGATCATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCAGAGATTGAGTATTATGCGATGTTGGCTAAGGTTGGAGTTCACCATTACAACGGAAGCAATGTAGATCTTGGAACTGCATGTGGAAAGTATTACAGAGTATGCTGCCTCAGTATTATCGATCCTGGCGATTCTGATATCATCAAGAGCATTCCCGGAGACAGTTAG

Protein sequence

MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS
Homology
[Close]
BLAST of Carg18011 vs. NCBI nr
Match: XP_022925483.1 (60S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal protein L30 [Cucurbita maxima] >XP_023529418.1 60S ribosomal protein L30 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-56
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 113
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 112

[Close]
BLAST of Carg18011 vs. NCBI nr
Match: XP_022960585.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023515547.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-55
Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 113
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PG+S
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]
BLAST of Carg18011 vs. NCBI nr
Match: XP_006340286.1 (PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum])

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-55
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. NCBI nr
Match: XP_022157366.1 (60S ribosomal protein L30 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 2.9e-55
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]
BLAST of Carg18011 vs. NCBI nr
Match: PKI73294.1 (hypothetical protein CRG98_006232 [Punica granatum])

HSP 1 Score: 223.4 bits (568), Expect = 3.9e-55
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LRSSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSVPGD 111

[Close]
BLAST of Carg18011 vs. TAIR10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-52
Identity = 96/111 (86.49%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]
BLAST of Carg18011 vs. TAIR10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 201.1 bits (510), Expect = 3.7e-52
Identity = 95/111 (85.59%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. TAIR10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-51
Identity = 93/111 (83.78%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLK+LRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVH YNG+NVDLGTACGKY+RV CLSI+DPGDSDIIK++PGD
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111

[Close]
BLAST of Carg18011 vs. Swiss-Prot
Match: sp|O49884|RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 4.8e-57
Identity = 106/111 (95.50%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LRSSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSI+DPGDSDIIK++PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111

[Close]
BLAST of Carg18011 vs. Swiss-Prot
Match: sp|Q9M5M6|RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-54
Identity = 103/111 (92.79%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESIN+RLALVMKSGK+TLGYKTVL++LRS+KGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RVCCLSIID GDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. Swiss-Prot
Match: sp|Q9C8F7|RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-51
Identity = 96/111 (86.49%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]
BLAST of Carg18011 vs. Swiss-Prot
Match: sp|Q8VZ19|RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 6.7e-51
Identity = 95/111 (85.59%), Postives = 105/111 (94.59%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. Swiss-Prot
Match: sp|Q9LSA3|RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-50
Identity = 93/111 (83.78%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLK+LRSSKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVH YNG+NVDLGTACGKY+RV CLSI+DPGDSDIIK++PGD
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111

[Close]
BLAST of Carg18011 vs. TrEMBL
Match: tr|A0A0V0GYL7|A0A0V0GYL7_SOLCH (Putative ovule protein OS=Solanum chacoense OX=4108 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-55
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. TrEMBL
Match: tr|M1BM03|M1BM03_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102595051 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.5e-55
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. TrEMBL
Match: tr|A7X6P5|A7X6P5_PEA (Ribosomal protein L30e OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.5e-55
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LRSSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSI+DPGDSDIIKSIPGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKSIPGD 111

[Close]
BLAST of Carg18011 vs. TrEMBL
Match: tr|A0A2I0KXV1|A0A2I0KXV1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_006232 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.5e-55
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LRSSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSVPGD 111

[Close]
BLAST of Carg18011 vs. TrEMBL
Match: tr|A0A1U8ENE7|A0A1U8ENE7_CAPAN (60S ribosomal protein L30 OS=Capsicum annuum OX=4072 GN=LOC107848475 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.3e-55
Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGD 111

The following BLAST results are available for this feature:
BLAST of Carg18011 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925483.11.6e-56100.0060S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal pro... [more]
XP_022960585.11.7e-5597.3260S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosoma... [more]
XP_006340286.12.3e-5598.20PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum][more]
XP_022157366.12.9e-5598.2060S ribosomal protein L30 [Momordica charantia][more]
PKI73294.13.9e-5597.30hypothetical protein CRG98_006232 [Punica granatum][more]
BLAST of Carg18011 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G36240.11.3e-5286.49Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein[more]
AT1G77940.13.7e-5285.59Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein[more]
AT3G18740.14.1e-5183.78Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein[more]
BLAST of Carg18011 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O49884|RL30_LUPLU4.8e-5795.5060S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1[more]
sp|Q9M5M6|RL30_EUPES1.7e-5492.7960S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1[more]
sp|Q9C8F7|RL301_ARATH2.3e-5186.49Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P... [more]
sp|Q8VZ19|RL302_ARATH6.7e-5185.5960S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1[more]
sp|Q9LSA3|RL303_ARATH7.4e-5083.7860S ribosomal protein L30-3 OS=Arabidopsis thaliana OX=3702 GN=RPL30C PE=3 SV=1[more]
BLAST of Carg18011 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0V0GYL7|A0A0V0GYL7_SOLCH1.5e-5598.20Putative ovule protein OS=Solanum chacoense OX=4108 PE=3 SV=1[more]
tr|M1BM03|M1BM03_SOLTU1.5e-5598.20Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102595051 PE=3 SV=1[more]
tr|A7X6P5|A7X6P5_PEA2.5e-5597.30Ribosomal protein L30e OS=Pisum sativum OX=3888 PE=2 SV=1[more]
tr|A0A2I0KXV1|A0A2I0KXV1_PUNGR2.5e-5597.30Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_006232 PE=3 SV=1[more]
tr|A0A1U8ENE7|A0A1U8ENE7_CAPAN3.3e-5597.3060S ribosomal protein L30 OS=Capsicum annuum OX=4072 GN=LOC107848475 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR022991Ribosomal_L30e_CS
IPR000231Ribosomal_L30e
IPR039109L30/L30e/YlxQ
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg18011-RACarg18011-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 3.2E-24
score: 84.4
IPR02906450S ribosomal protein L30e-likeGENE3DG3DSA:3.30.1330.30coord: 1..105
e-value: 1.9E-54
score: 183.8
IPR02906450S ribosomal protein L30e-likeSUPERFAMILYSSF55315L30e-likecoord: 13..106
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 2..111
IPR000231Ribosomal protein L30ePANTHERPTHR11449:SF9SUBFAMILY NOT NAMEDcoord: 2..111
IPR000231Ribosomal protein L30eHAMAPMF_00481Ribosomal_L30ecoord: 12..109
score: 21.494
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48