BLAST of Carg17984 vs. NCBI nr
Match:
XP_022927711.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata] >XP_022927721.1 pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata])
HSP 1 Score: 999.2 bits (2582), Expect = 5.8e-288
Identity = 562/564 (99.65%), Postives = 562/564 (99.65%), Query Frame = 0
Query: 20 RFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSF 79
RFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSF
Sbjct: 53 RFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSF 112
Query: 80 AFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTI 139
AFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTI
Sbjct: 113 AFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTI 172
Query: 140 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232
Query: 200 XXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL 259
XXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL
Sbjct: 233 XXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL 292
Query: 260 EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLN 319
EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLN
Sbjct: 293 EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLN 352
Query: 320 ACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDV 379
ACSHGNRVEEGRGYFESMAG FGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPL PDV
Sbjct: 353 ACSHGNRVEEGRGYFESMAGRFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLAPDV 412
Query: 380 AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 439
AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI
Sbjct: 413 AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 472
Query: 440 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL 499
AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL
Sbjct: 473 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL 532
Query: 500 LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR 559
LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR
Sbjct: 533 LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR 592
Query: 560 EIVVRDRIRYHHFKDGACSCNDYW 584
EIVVRDRIRYHHFKDGACSCNDYW
Sbjct: 593 EIVVRDRIRYHHFKDGACSCNDYW 616
BLAST of Carg17984 vs. NCBI nr
Match:
XP_023529533.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 983.4 bits (2541), Expect = 3.3e-283
Identity = 553/564 (98.05%), Postives = 558/564 (98.94%), Query Frame = 0
Query: 20 RFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSF 79
RFASISYAQMVFDHFPQPDLFLYNTIIKAHA+SATSSADSFTRFRSLIRDGRLVPNQYSF
Sbjct: 53 RFASISYAQMVFDHFPQPDLFLYNTIIKAHAISATSSADSFTRFRSLIRDGRLVPNQYSF 112
Query: 80 AFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTI 139
AFAFKGCGNAVGVLEGEQVR HAVKLGLENNLFVMNALIGMYVNLG VG ARKVFDWSTI
Sbjct: 113 AFAFKGCGNAVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVGYARKVFDWSTI 172
Query: 140 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232
Query: 200 XXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL 259
XXXXX PNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL
Sbjct: 233 XXXXXNPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL 292
Query: 260 EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLN 319
EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIE+FEQMKVEKVSPNKVTFVALLN
Sbjct: 293 EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLN 352
Query: 320 ACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDV 379
ACSHGNRVEEGR YF+SMAG +GVEPELEHYGCMVDLLGRSGRLKEAEEIISSMP+TPDV
Sbjct: 353 ACSHGNRVEEGRRYFKSMAGRYGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPMTPDV 412
Query: 380 AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 439
AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI
Sbjct: 413 AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 472
Query: 440 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL 499
AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL
Sbjct: 473 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL 532
Query: 500 LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR 559
LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR
Sbjct: 533 LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR 592
Query: 560 EIVVRDRIRYHHFKDGACSCNDYW 584
EIVVRDRIRYHHFKDGACSCNDYW
Sbjct: 593 EIVVRDRIRYHHFKDGACSCNDYW 616
BLAST of Carg17984 vs. NCBI nr
Match:
XP_022967088.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])
HSP 1 Score: 965.3 bits (2494), Expect = 9.3e-278
Identity = 545/564 (96.63%), Postives = 551/564 (97.70%), Query Frame = 0
Query: 20 RFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSF 79
RF SISYAQMVFDHFPQPDLFLYNTIIKAHA+SATSSADSFTRFRSLIRDG LVPNQYSF
Sbjct: 53 RFGSISYAQMVFDHFPQPDLFLYNTIIKAHAISATSSADSFTRFRSLIRDGSLVPNQYSF 112
Query: 80 AFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTI 139
AFAFKGCGNAVGVLEGEQVR HAVKLGLENNLFVMNALIGMYVNLG VGDARKVFDWSTI
Sbjct: 113 AFAFKGCGNAVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVGDARKVFDWSTI 172
Query: 140 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 199
RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 173 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232
Query: 200 XXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGEL 259
XXXXXG NEYTLASALAACANLVALDQGRWMHVYIRKNEI LNDRLLAGLIDMYVKCGEL
Sbjct: 233 XXXXXGLNEYTLASALAACANLVALDQGRWMHVYIRKNEIQLNDRLLAGLIDMYVKCGEL 292
Query: 260 EFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLN 319
EFA KLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIE+FEQMKVEKVSPNKVTFVALLN
Sbjct: 293 EFALKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLN 352
Query: 320 ACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDV 379
ACSHGNRVEEGR YFESMAG +GVEPELEHYGCMVDLLGRSGRLKEAEEIISSMP+T DV
Sbjct: 353 ACSHGNRVEEGRRYFESMAGLYGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPMTADV 412
Query: 380 AIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 439
AIWGALLSACKTHKDIEMGERIGKIV ELDSDHLGCHVLLANMYSLTGNWNEARTLREKI
Sbjct: 413 AIWGALLSACKTHKDIEMGERIGKIVTELDSDHLGCHVLLANMYSLTGNWNEARTLREKI 472
Query: 440 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVL 499
AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYM LDEMTTKLKMAGYIPESGEVL
Sbjct: 473 AVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMLLDEMTTKLKMAGYIPESGEVL 532
Query: 500 LDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDR 559
LDIDD+EDRETALLKHSEKLAIAFGLMNTAP+TPIRIVKNLRVCGDCH AIKFISKVYDR
Sbjct: 533 LDIDDDEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDR 592
Query: 560 EIVVRDRIRYHHFKDGACSCNDYW 584
EIVVRDRIRYHHFKDGACSCNDYW
Sbjct: 593 EIVVRDRIRYHHFKDGACSCNDYW 616
BLAST of Carg17984 vs. NCBI nr
Match:
XP_008450449.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis melo])
HSP 1 Score: 885.2 bits (2286), Expect = 1.2e-253
Identity = 495/563 (87.92%), Postives = 523/563 (92.90%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
FA ISYA MVFDHFPQPDLFLYNTIIK A S TSSADSFTRFRSLIR+ RLVPNQYSFA
Sbjct: 47 FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFA 106
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
FAFK CG+ VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL V DARKVF+WS R
Sbjct: 107 FAFKACGSGVGVLEGEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYR 166
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 167 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 226
Query: 201 XXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELE 260
X PNE+TLASAL+ACANLVALDQGRWMHVYI+KN I +N+RLLAGLIDMY KCGELE
Sbjct: 227 XKGMSPNEHTLASALSACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELE 286
Query: 261 FASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNA 320
FASKLFNS +RKVWPWNAMIGGFA+HGKSKEAIE+FEQMK+EKVSPNKVTFV+LLNA
Sbjct: 287 FASKLFNSNPQLMRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVSLLNA 346
Query: 321 CSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVA 380
CSHGNRV+EGR YFESMA +GV+P LEHYGC+VDLLGR+GRLKEAEEIISSM LTPDVA
Sbjct: 347 CSHGNRVKEGRYYFESMASHYGVKPVLEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 381 IWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIA 440
IWGALLSACK HKD+EMGERIGKIV+ELD +HLGCHVLLAN+YSLTGNWNEARTLREKIA
Sbjct: 407 IWGALLSACKIHKDVEMGERIGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 441 VSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLL 500
VSGKKKTPGCSSIELNG FHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGY+PESGEVLL
Sbjct: 467 VSGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYVPESGEVLL 526
Query: 501 DIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDRE 560
DIDDNEDRETALLKHSEKLAIAFGLMNT PKTPIRIVKNLRVC DCHLAIKFISKVYDRE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCNDCHLAIKFISKVYDRE 586
Query: 561 IVVRDRIRYHHFKDGACSCNDYW 584
I+VRDRIRYHHFKDG CSCNDYW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
BLAST of Carg17984 vs. NCBI nr
Match:
XP_004139110.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus] >KGN66465.1 hypothetical protein Csa_1G612890 [Cucumis sativus])
HSP 1 Score: 866.3 bits (2237), Expect = 5.9e-248
Identity = 494/563 (87.74%), Postives = 516/563 (91.65%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
FA ISYA MVFDHFPQPDLFLYNTIIK A S TSSADSFT+FRSLIR+ RLVPNQYSFA
Sbjct: 47 FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFA 106
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL V DARKVFDWS R
Sbjct: 107 XXXXXXXXXVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNR 166
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 167 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 226
Query: 201 XXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELE 260
XXX PNEYTLAS+LAACANLVALDQGRWMHVYI+KN I +N+RLLAGLIDMY KCGELE
Sbjct: 227 XXXMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELE 286
Query: 261 FASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNA 320
FASKLFNS RKVWPWNAMIGGFA+HGKSKEAIE+FEQMK+EKVSPNKVTFVALLNA
Sbjct: 287 FASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNA 346
Query: 321 CSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVA 380
CSHGNRVEEGR YFESMA + V+PELEHYGC+VDLLGR+GRLKEAEEIISSM LTPDVA
Sbjct: 347 CSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 381 IWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIA 440
IWGALLSACK HKD EMGER+GKIV+ELD +HLGCHVLLAN+YSLTGNWNEARTLREKIA
Sbjct: 407 IWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 441 VSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLL 500
SGKKKTPGCSSIELNG FHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGYIPESGEVLL
Sbjct: 467 ESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLL 526
Query: 501 DIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDRE 560
DIDDNEDRETALLKHSEKLAIAFGLMNT PKTPIRIVKNLRVC DCHLAIKFISKVYDRE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDRE 586
Query: 561 IVVRDRIRYHHFKDGACSCNDYW 584
I+VRDRIRYHHFKDG CSCNDYW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
BLAST of Carg17984 vs. TAIR10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 433.3 bits (1113), Expect = 2.3e-121
Identity = 259/593 (43.68%), Postives = 354/593 (59.70%), Query Frame = 0
Query: 6 AAIAALRGLFFKLLRFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSA-DSFTRFR 65
AA LR L + YA +F+ PQ + F +NTII+ + S A + T F
Sbjct: 57 AAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFY 116
Query: 66 SLIRDGRLVPNQYSFAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNL 125
++ D + PN+++F K C + EG+Q+ A+K G + FVM+ L+ MYV
Sbjct: 117 EMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
Query: 126 GVVGDARKVFDWSTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
G + DAR +F + I XXXX
Sbjct: 177 GFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXX 236
Query: 186 XXXXXXXXXXXXXXXXXXXXG--------------PNEYTLASALAACANLVALDQGRWM 245
XXXXXXXXXXXXXXXXXXXX PN TL S L A + L +L+ G W+
Sbjct: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 246 HVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHG 305
H+Y + I ++D L + LIDMY KCG +E A +F ER+ V W+AMI GFA+HG
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF--ERLPRENVITWSAMINGFAIHG 356
Query: 306 KSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHY 365
++ +AI+ F +M+ V P+ V ++ LL ACSHG VEEGR YF M G+EP +EHY
Sbjct: 357 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 416
Query: 366 GCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWGALLSACKTHKDIEMGERIGKIVRELDS 425
GCMVDLLGRSG L EAEE I +MP+ PD IW ALL AC+ ++EMG+R+ I+ ++
Sbjct: 417 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVP 476
Query: 426 DHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHP 485
G +V L+NMY+ GNW+E +R ++ +K PGCS I+++G H+F+V D SHP
Sbjct: 477 HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHP 536
Query: 486 QTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAP 545
+ KE+ L E++ KL++AGY P + +VLL++++ ED+E L HSEK+A AFGL++T+P
Sbjct: 537 KAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE-EDKENVLHYHSEKIATAFGLISTSP 596
Query: 546 KTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
PIRIVKNLR+C DCH +IK ISKVY R+I VRDR R+HHF+DG+CSC DYW
Sbjct: 597 GKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of Carg17984 vs. TAIR10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 429.5 bits (1103), Expect = 3.3e-120
Identity = 288/560 (51.43%), Postives = 374/560 (66.79%), Query Frame = 0
Query: 24 ISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAF 83
+ YAQ+VFD F +PD FL+N +I+ + S R L N Y+F
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLL 124
Query: 84 KGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRXXX 143
K C N E Q+ A KLG EN+++ +N+LI Y G A +FD XXX
Sbjct: 125 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXX 184
Query: 144 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 203
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 204 XGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFAS 263
P+ +LA+AL+ACA L AL+QG+W+H Y+ K I ++ L LIDMY KCGE+E A
Sbjct: 245 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 304
Query: 264 KLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSH 323
++F + + + V W A+I G+A HG +EAI F +M+ + PN +TF A+L ACS+
Sbjct: 305 EVF--KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 364
Query: 324 GNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWG 383
VEEG+ F SM + ++P +EHYGC+VDLLGR+G L EA+ I MPL P+ IWG
Sbjct: 365 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 424
Query: 384 ALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSG 443
ALL AC+ HK+IE+GE IG+I+ +D H G +V AN++++ W++A R + G
Sbjct: 425 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 484
Query: 444 KKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDID 503
K PGCS+I L GT H+FL GDRSHP+ +++ M KL+ GY+PE E+LLD+
Sbjct: 485 VAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLV 544
Query: 504 DNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVV 563
D+++RE + +HSEKLAI +GL+ T P T IRI+KNLRVC DCH K ISK+Y R+IV+
Sbjct: 545 DDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVM 604
Query: 564 RDRIRYHHFKDGACSCNDYW 584
RDR R+HHF+DG CSC DYW
Sbjct: 605 RDRTRFHHFRDGKCSCGDYW 620
BLAST of Carg17984 vs. TAIR10
Match:
AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 416.8 bits (1070), Expect = 2.2e-116
Identity = 223/588 (37.93%), Postives = 326/588 (55.44%), Query Frame = 0
Query: 14 LFFKLLR----FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRD 73
L+ K+L+ F+ ++YA VFD F++NT+I+A A + ++F +R ++
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 74 GRLVPNQYSFAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGD 133
G P++++F F K C G EG+QV VK G +++V N LI +Y + G +
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 204
Query: 134 ARKVFDWSTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
ARKVFD R
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE---------------- 264
Query: 194 XXXXXXXXXXXXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKN---EIPLNDRLL 253
P+ YT+ S L+ACA L +L G W H ++ + ++ ++ +
Sbjct: 265 ----------------PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVK 324
Query: 254 AGLIDMYVKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQM--KV 313
LI+MY KCG L A ++F + M R + WNAMI GFA HG+++EA+ F++M K
Sbjct: 325 NSLIEMYCKCGSLRMAEQVF--QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 384
Query: 314 EKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLK 373
E V PN VTFV LL AC+H V +GR YF+ M + +EP LEHYGC+VDL+ R+G +
Sbjct: 385 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 444
Query: 374 EAEEIISSMPLTPDVAIWGALLSA-CKTHKDIEMGERIGKIVRELDSDH-------LGCH 433
EA +++ SMP+ PD IW +LL A CK +E+ E I + + D+ G +
Sbjct: 445 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 504
Query: 434 VLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELY 493
VLL+ +Y+ WN+ +R+ ++ G +K PGCSSIE+NG H+F GD SHPQTK++Y
Sbjct: 505 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIY 564
Query: 494 MFLDEMTTKLKMAGYIPESGEV-LLDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIR 553
L + +L+ GY+P+ + L+D ++ +E +L HSE+LAIAFGL+N P+TPIR
Sbjct: 565 QQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIR 624
Query: 554 IVKNLRVCGDCHLAIKFISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
I KNLRVC DCH K ISKV++ EI+VRDR+R+HHFKDG+CSC DYW
Sbjct: 625 IFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
BLAST of Carg17984 vs. TAIR10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-116
Identity = 233/666 (34.98%), Postives = 332/666 (49.85%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
F + YA VF +P+L ++NT+ + HALS + + + +I G L+PN Y+F
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALS-SDPVSALKLYVCMISLG-LLPNSYTFP 140
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
F K C + EG+Q+ H +KLG + +L+V +LI MYV G + DA KVFD S R
Sbjct: 141 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 200
Query: 141 ------------------------------------------------------------ 200
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 260
Query: 201 -----------------------------------------XXXXXXXXXXXXXXXXXXX 260
Sbjct: 261 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 320
Query: 261 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPNEYTLASALAACA 320
PN+ T+ S L ACA
Sbjct: 321 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 380
Query: 321 NLVALDQGRWMHVYI--RKNEIPLNDRLLAGLIDMYVKCGELEFASKLFNSERMSIRKVW 380
+L A+D GRW+HVYI R + L LIDMY KCG++E A ++FNS + + +
Sbjct: 381 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLS 440
Query: 381 PWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESM 440
WNAMI GFAMHG++ + +LF +M+ + P+ +TFV LL+ACSH ++ GR F +M
Sbjct: 441 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 500
Query: 441 AGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWGALLSACKTHKDIEM 500
+ + P+LEHYGCM+DLLG SG KEAEE+I+ M + PD IW +LL ACK H ++E+
Sbjct: 501 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 560
Query: 501 GERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNG 560
GE + + +++ ++ G +VLL+N+Y+ G WNE R + G KK PGCSSIE++
Sbjct: 561 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 620
Query: 561 TFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNEDRETALLKHSE 584
H+F++GD+ HP+ +E+Y L+EM L+ AG++P++ EVL ++++ E +E AL HSE
Sbjct: 621 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSE 680
BLAST of Carg17984 vs. TAIR10
Match:
AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 415.6 bits (1067), Expect = 5.0e-116
Identity = 283/571 (49.56%), Postives = 389/571 (68.13%), Query Frame = 0
Query: 22 ASISYAQMVFD-HFPQPDLFLYNTIIKA--HALSATSSADSFTRFRSLIRDGRLVPNQYS 81
A I+YA +F + + FL+N II+A H +S+ + + + R+ R+ P+ ++
Sbjct: 6 AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHT 65
Query: 82 FAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWST 141
F F N + + G++ A + GL+ + FV +L+ MY + G + A++VFD S
Sbjct: 66 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 125
Query: 142 IRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126 SKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
Query: 202 XXXXXXG-----PNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMY 261
XX PNE+T+++ L+AC L AL+QG+W+H YI K + ++ L LIDMY
Sbjct: 186 XXLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 245
Query: 262 VKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKV-EKVSPNKV 321
KCG LE A ++FN+ S + V ++AMI AM+G + E +LF +M + ++PN V
Sbjct: 246 AKCGSLERAKRVFNA-LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 305
Query: 322 TFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISS 381
TFV +L AC H + EG+ YF+ M FG+ P ++HYGCMVDL GRSG +KEAE I+S
Sbjct: 306 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 365
Query: 382 MPLTPDVAIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEA 441
MP+ PDV IWG+LLS + DI+ E K + ELD + G +VLL+N+Y+ TG W E
Sbjct: 366 MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEV 425
Query: 442 RTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYI 501
+ +R ++ V G K PGCS +E+ G H+F+VGD S +++ +Y LDE+ +L+ AGY+
Sbjct: 426 KCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYV 485
Query: 502 PESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKF 561
++ EVLLD+++ +D+E AL HSEKLAIAF LM T P TP+RI+KNLR+CGDCHL +K
Sbjct: 486 TDTKEVLLDLNE-KDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKM 545
Query: 562 ISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
ISK++ REIVVRD R+HHF+DG+CSC D+W
Sbjct: 546 ISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of Carg17984 vs. Swiss-Prot
Match:
sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 433.3 bits (1113), Expect = 4.2e-120
Identity = 259/593 (43.68%), Postives = 354/593 (59.70%), Query Frame = 0
Query: 6 AAIAALRGLFFKLLRFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSA-DSFTRFR 65
AA LR L + YA +F+ PQ + F +NTII+ + S A + T F
Sbjct: 57 AAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFY 116
Query: 66 SLIRDGRLVPNQYSFAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNL 125
++ D + PN+++F K C + EG+Q+ A+K G + FVM+ L+ MYV
Sbjct: 117 EMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
Query: 126 GVVGDARKVFDWSTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
G + DAR +F + I XXXX
Sbjct: 177 GFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXX 236
Query: 186 XXXXXXXXXXXXXXXXXXXXG--------------PNEYTLASALAACANLVALDQGRWM 245
XXXXXXXXXXXXXXXXXXXX PN TL S L A + L +L+ G W+
Sbjct: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 246 HVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHG 305
H+Y + I ++D L + LIDMY KCG +E A +F ER+ V W+AMI GFA+HG
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVF--ERLPRENVITWSAMINGFAIHG 356
Query: 306 KSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHY 365
++ +AI+ F +M+ V P+ V ++ LL ACSHG VEEGR YF M G+EP +EHY
Sbjct: 357 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 416
Query: 366 GCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWGALLSACKTHKDIEMGERIGKIVRELDS 425
GCMVDLLGRSG L EAEE I +MP+ PD IW ALL AC+ ++EMG+R+ I+ ++
Sbjct: 417 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVP 476
Query: 426 DHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHP 485
G +V L+NMY+ GNW+E +R ++ +K PGCS I+++G H+F+V D SHP
Sbjct: 477 HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHP 536
Query: 486 QTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAP 545
+ KE+ L E++ KL++AGY P + +VLL++++ ED+E L HSEK+A AFGL++T+P
Sbjct: 537 KAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE-EDKENVLHYHSEKIATAFGLISTSP 596
Query: 546 KTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
PIRIVKNLR+C DCH +IK ISKVY R+I VRDR R+HHF+DG+CSC DYW
Sbjct: 597 GKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of Carg17984 vs. Swiss-Prot
Match:
sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 429.5 bits (1103), Expect = 6.0e-119
Identity = 288/560 (51.43%), Postives = 374/560 (66.79%), Query Frame = 0
Query: 24 ISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAF 83
+ YAQ+VFD F +PD FL+N +I+ + S R L N Y+F
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSA--PHNAYTFPSLL 124
Query: 84 KGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRXXX 143
K C N E Q+ A KLG EN+++ +N+LI Y G A +FD XXX
Sbjct: 125 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXX 184
Query: 144 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 203
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 204 XGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFAS 263
P+ +LA+AL+ACA L AL+QG+W+H Y+ K I ++ L LIDMY KCGE+E A
Sbjct: 245 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 304
Query: 264 KLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSH 323
++F + + + V W A+I G+A HG +EAI F +M+ + PN +TF A+L ACS+
Sbjct: 305 EVF--KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 364
Query: 324 GNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWG 383
VEEG+ F SM + ++P +EHYGC+VDLLGR+G L EA+ I MPL P+ IWG
Sbjct: 365 TGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 424
Query: 384 ALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSG 443
ALL AC+ HK+IE+GE IG+I+ +D H G +V AN++++ W++A R + G
Sbjct: 425 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 484
Query: 444 KKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDID 503
K PGCS+I L GT H+FL GDRSHP+ +++ M KL+ GY+PE E+LLD+
Sbjct: 485 VAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLV 544
Query: 504 DNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVV 563
D+++RE + +HSEKLAI +GL+ T P T IRI+KNLRVC DCH K ISK+Y R+IV+
Sbjct: 545 DDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVM 604
Query: 564 RDRIRYHHFKDGACSCNDYW 584
RDR R+HHF+DG CSC DYW
Sbjct: 605 RDRTRFHHFRDGKCSCGDYW 620
BLAST of Carg17984 vs. Swiss-Prot
Match:
sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)
HSP 1 Score: 416.8 bits (1070), Expect = 4.0e-115
Identity = 223/588 (37.93%), Postives = 326/588 (55.44%), Query Frame = 0
Query: 14 LFFKLLR----FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRD 73
L+ K+L+ F+ ++YA VFD F++NT+I+A A + ++F +R ++
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 74 GRLVPNQYSFAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGD 133
G P++++F F K C G EG+QV VK G +++V N LI +Y + G +
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 204
Query: 134 ARKVFDWSTIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
ARKVFD R
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE---------------- 264
Query: 194 XXXXXXXXXXXXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKN---EIPLNDRLL 253
P+ YT+ S L+ACA L +L G W H ++ + ++ ++ +
Sbjct: 265 ----------------PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVK 324
Query: 254 AGLIDMYVKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQM--KV 313
LI+MY KCG L A ++F + M R + WNAMI GFA HG+++EA+ F++M K
Sbjct: 325 NSLIEMYCKCGSLRMAEQVF--QGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 384
Query: 314 EKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLK 373
E V PN VTFV LL AC+H V +GR YF+ M + +EP LEHYGC+VDL+ R+G +
Sbjct: 385 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 444
Query: 374 EAEEIISSMPLTPDVAIWGALLSA-CKTHKDIEMGERIGKIVRELDSDH-------LGCH 433
EA +++ SMP+ PD IW +LL A CK +E+ E I + + D+ G +
Sbjct: 445 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 504
Query: 434 VLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELY 493
VLL+ +Y+ WN+ +R+ ++ G +K PGCSSIE+NG H+F GD SHPQTK++Y
Sbjct: 505 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIY 564
Query: 494 MFLDEMTTKLKMAGYIPESGEV-LLDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIR 553
L + +L+ GY+P+ + L+D ++ +E +L HSE+LAIAFGL+N P+TPIR
Sbjct: 565 QQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIR 624
Query: 554 IVKNLRVCGDCHLAIKFISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
I KNLRVC DCH K ISKV++ EI+VRDR+R+HHFKDG+CSC DYW
Sbjct: 625 IFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
BLAST of Carg17984 vs. Swiss-Prot
Match:
sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 6.9e-115
Identity = 233/666 (34.98%), Postives = 332/666 (49.85%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
F + YA VF +P+L ++NT+ + HALS + + + +I G L+PN Y+F
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALS-SDPVSALKLYVCMISLG-LLPNSYTFP 140
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
F K C + EG+Q+ H +KLG + +L+V +LI MYV G + DA KVFD S R
Sbjct: 141 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 200
Query: 141 ------------------------------------------------------------ 200
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 260
Query: 201 -----------------------------------------XXXXXXXXXXXXXXXXXXX 260
Sbjct: 261 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 320
Query: 261 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPNEYTLASALAACA 320
PN+ T+ S L ACA
Sbjct: 321 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 380
Query: 321 NLVALDQGRWMHVYI--RKNEIPLNDRLLAGLIDMYVKCGELEFASKLFNSERMSIRKVW 380
+L A+D GRW+HVYI R + L LIDMY KCG++E A ++FNS + + +
Sbjct: 381 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLS 440
Query: 381 PWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESM 440
WNAMI GFAMHG++ + +LF +M+ + P+ +TFV LL+ACSH ++ GR F +M
Sbjct: 441 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 500
Query: 441 AGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWGALLSACKTHKDIEM 500
+ + P+LEHYGCM+DLLG SG KEAEE+I+ M + PD IW +LL ACK H ++E+
Sbjct: 501 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 560
Query: 501 GERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNG 560
GE + + +++ ++ G +VLL+N+Y+ G WNE R + G KK PGCSSIE++
Sbjct: 561 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 620
Query: 561 TFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNEDRETALLKHSE 584
H+F++GD+ HP+ +E+Y L+EM L+ AG++P++ EVL ++++ E +E AL HSE
Sbjct: 621 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSE 680
BLAST of Carg17984 vs. Swiss-Prot
Match:
sp|Q683I9|PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 415.6 bits (1067), Expect = 9.0e-115
Identity = 283/571 (49.56%), Postives = 389/571 (68.13%), Query Frame = 0
Query: 22 ASISYAQMVFD-HFPQPDLFLYNTIIKA--HALSATSSADSFTRFRSLIRDGRLVPNQYS 81
A I+YA +F + + FL+N II+A H +S+ + + + R+ R+ P+ ++
Sbjct: 6 AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRM-RNHRVSPDFHT 65
Query: 82 FAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWST 141
F F N + + G++ A + GL+ + FV +L+ MY + G + A++VFD S
Sbjct: 66 FPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG 125
Query: 142 IRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201
+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126 SKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185
Query: 202 XXXXXXG-----PNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMY 261
XX PNE+T+++ L+AC L AL+QG+W+H YI K + ++ L LIDMY
Sbjct: 186 XXLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 245
Query: 262 VKCGELEFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKV-EKVSPNKV 321
KCG LE A ++FN+ S + V ++AMI AM+G + E +LF +M + ++PN V
Sbjct: 246 AKCGSLERAKRVFNA-LGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 305
Query: 322 TFVALLNACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISS 381
TFV +L AC H + EG+ YF+ M FG+ P ++HYGCMVDL GRSG +KEAE I+S
Sbjct: 306 TFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIAS 365
Query: 382 MPLTPDVAIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEA 441
MP+ PDV IWG+LLS + DI+ E K + ELD + G +VLL+N+Y+ TG W E
Sbjct: 366 MPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEV 425
Query: 442 RTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYI 501
+ +R ++ V G K PGCS +E+ G H+F+VGD S +++ +Y LDE+ +L+ AGY+
Sbjct: 426 KCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYV 485
Query: 502 PESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKF 561
++ EVLLD+++ +D+E AL HSEKLAIAF LM T P TP+RI+KNLR+CGDCHL +K
Sbjct: 486 TDTKEVLLDLNE-KDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKM 545
Query: 562 ISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
ISK++ REIVVRD R+HHF+DG+CSC D+W
Sbjct: 546 ISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of Carg17984 vs. TrEMBL
Match:
tr|A0A1S3BNM1|A0A1S3BNM1_CUCME (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=3656 GN=LOC103492046 PE=4 SV=1)
HSP 1 Score: 885.2 bits (2286), Expect = 8.1e-254
Identity = 495/563 (87.92%), Postives = 523/563 (92.90%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
FA ISYA MVFDHFPQPDLFLYNTIIK A S TSSADSFTRFRSLIR+ RLVPNQYSFA
Sbjct: 47 FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFA 106
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
FAFK CG+ VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL V DARKVF+WS R
Sbjct: 107 FAFKACGSGVGVLEGEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYR 166
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 167 DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 226
Query: 201 XXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELE 260
X PNE+TLASAL+ACANLVALDQGRWMHVYI+KN I +N+RLLAGLIDMY KCGELE
Sbjct: 227 XKGMSPNEHTLASALSACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELE 286
Query: 261 FASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNA 320
FASKLFNS +RKVWPWNAMIGGFA+HGKSKEAIE+FEQMK+EKVSPNKVTFV+LLNA
Sbjct: 287 FASKLFNSNPQLMRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVSLLNA 346
Query: 321 CSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVA 380
CSHGNRV+EGR YFESMA +GV+P LEHYGC+VDLLGR+GRLKEAEEIISSM LTPDVA
Sbjct: 347 CSHGNRVKEGRYYFESMASHYGVKPVLEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 381 IWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIA 440
IWGALLSACK HKD+EMGERIGKIV+ELD +HLGCHVLLAN+YSLTGNWNEARTLREKIA
Sbjct: 407 IWGALLSACKIHKDVEMGERIGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 441 VSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLL 500
VSGKKKTPGCSSIELNG FHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGY+PESGEVLL
Sbjct: 467 VSGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYVPESGEVLL 526
Query: 501 DIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDRE 560
DIDDNEDRETALLKHSEKLAIAFGLMNT PKTPIRIVKNLRVC DCHLAIKFISKVYDRE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCNDCHLAIKFISKVYDRE 586
Query: 561 IVVRDRIRYHHFKDGACSCNDYW 584
I+VRDRIRYHHFKDG CSCNDYW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
BLAST of Carg17984 vs. TrEMBL
Match:
tr|A0A0A0LX83|A0A0A0LX83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G612890 PE=4 SV=1)
HSP 1 Score: 866.3 bits (2237), Expect = 3.9e-248
Identity = 494/563 (87.74%), Postives = 516/563 (91.65%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
FA ISYA MVFDHFPQPDLFLYNTIIK A S TSSADSFT+FRSLIR+ RLVPNQYSFA
Sbjct: 47 FAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFA 106
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
VGVLEGEQVR HA+KLGLENNLFV NALIGMYVNL V DARKVFDWS R
Sbjct: 107 XXXXXXXXXVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNR 166
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 167 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 226
Query: 201 XXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELE 260
XXX PNEYTLAS+LAACANLVALDQGRWMHVYI+KN I +N+RLLAGLIDMY KCGELE
Sbjct: 227 XXXMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELE 286
Query: 261 FASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNA 320
FASKLFNS RKVWPWNAMIGGFA+HGKSKEAIE+FEQMK+EKVSPNKVTFVALLNA
Sbjct: 287 FASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNA 346
Query: 321 CSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVA 380
CSHGNRVEEGR YFESMA + V+PELEHYGC+VDLLGR+GRLKEAEEIISSM LTPDVA
Sbjct: 347 CSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVA 406
Query: 381 IWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIA 440
IWGALLSACK HKD EMGER+GKIV+ELD +HLGCHVLLAN+YSLTGNWNEARTLREKIA
Sbjct: 407 IWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIA 466
Query: 441 VSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLL 500
SGKKKTPGCSSIELNG FHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGYIPESGEVLL
Sbjct: 467 ESGKKKTPGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLL 526
Query: 501 DIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDRE 560
DIDDNEDRETALLKHSEKLAIAFGLMNT PKTPIRIVKNLRVC DCHLAIKFISKVYDRE
Sbjct: 527 DIDDNEDRETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDRE 586
Query: 561 IVVRDRIRYHHFKDGACSCNDYW 584
I+VRDRIRYHHFKDG CSCNDYW
Sbjct: 587 IIVRDRIRYHHFKDGTCSCNDYW 609
BLAST of Carg17984 vs. TrEMBL
Match:
tr|F6GUA4|F6GUA4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g01520 PE=4 SV=1)
HSP 1 Score: 772.3 bits (1993), Expect = 7.7e-220
Identity = 428/563 (76.02%), Postives = 488/563 (86.68%), Query Frame = 0
Query: 21 FASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFA 80
F S+SYA +FD P+PD+F+YNT+IKAHA+ TSS +S F S++R +PN+Y+F
Sbjct: 35 FGSLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFV 94
Query: 81 FAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIR 140
F FK CGN +GVLEGEQ+R HA+K+GLE+NLFV NA+I MY N G+V +AR+VFDW
Sbjct: 95 FVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWXXXX 154
Query: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 200
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 155 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 214
Query: 201 XXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELE 260
X PNE+TLASALAACANLVALDQGRW+HVYI K+EI +N+RLLA L+DMY KCGE++
Sbjct: 215 XTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEID 274
Query: 261 FASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNA 320
FA+K+F+ E KVWPWNAMIGG+AMHGKSKEAI+LFEQMKVEKVSPNKVTFVALLNA
Sbjct: 275 FAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA 334
Query: 321 CSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVA 380
CSHG VEEGRGYF+SMA +G+EPE+EHYGCMVDLLGRSG LKEAEE + +MP+ PD
Sbjct: 335 CSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDAT 394
Query: 381 IWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIA 440
IWGALL AC+ HKDIE G+RIGKI++ELDSDH+GCHVLLAN+YS +G W+EA+ +R+KI
Sbjct: 395 IWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIE 454
Query: 441 VSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLL 500
VSG+KKTPGCSSIELNG FHQFLVGDRSHPQTK+LY+FLDEMTTKLK AGY+PE GEVLL
Sbjct: 455 VSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLL 514
Query: 501 DIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDRE 560
DIDD ED+ETAL KHSEKLAIAFGL+NT P T IRIVKNLRVC DCH A KFISKVY RE
Sbjct: 515 DIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKRE 574
Query: 561 IVVRDRIRYHHFKDGACSCNDYW 584
I+VRDRIRYHHFKDG CSC DYW
Sbjct: 575 IIVRDRIRYHHFKDGFCSCKDYW 597
BLAST of Carg17984 vs. TrEMBL
Match:
tr|A5ANS6|A5ANS6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_027683 PE=4 SV=1)
HSP 1 Score: 738.8 bits (1906), Expect = 9.4e-210
Identity = 414/539 (76.81%), Postives = 469/539 (87.01%), Query Frame = 0
Query: 45 IIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCGNAVGVLEGEQVRAHAVK 104
+IKAHA+ TSS +S F S++R +PN+Y+F F FK CGN +GVLEGEQ+R HA+K
Sbjct: 1 MIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIK 60
Query: 105 LGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRXXXXXXXXXXXXXXXXXXXXXXXX 164
+GLE+NLFV NA+I MY N G+V +AR+VFDW XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61 IGLESNLFVTNAMIRMYANWGLVDEARRVFDWXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPNEYTLASALAACANLVAL 224
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PNE+TLASALAACANLVAL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPPPNEFTLASALAACANLVAL 180
Query: 225 DQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFNSERMSIRKVWPWNAMIG 284
DQGRW+HVYI K+EI +N+RLLA L+DMY KCGE++FA+K+F+ E KVWPWNAMIG
Sbjct: 181 DQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIG 240
Query: 285 GFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGCFGVE 344
G+AMHGKSKEAI+LFEQMKVEKVSPNKVTFVALLNACSHG VEEGRGYF+SMA +G+E
Sbjct: 241 GYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIE 300
Query: 345 PELEHYGCMVDLLGRSGRLKEAEEIISSMPLTPDVAIWGALLSACKTHKDIEMGERIGKI 404
PE+EHYGCMVDLLGRSG LKEAEE + +MP+ PD IWGALL AC+ HKDIE G+RIGKI
Sbjct: 301 PEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKI 360
Query: 405 VRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLV 464
++ELDSDH+GCHVLLAN+YS +G W+EA+ +R+KI VSG+KKTPGCSSIELNG FHQFLV
Sbjct: 361 IKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLV 420
Query: 465 GDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNEDRETALLKHSEKLAIAFG 524
GDRSHPQTK+LY+FLDEMTTKLK AGY+PE GEVLLDIDD ED+ETAL KHSEKLAIAFG
Sbjct: 421 GDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFG 480
Query: 525 LMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRIRYHHFKDGACSCNDYW 584
L+NT P T IRIVKNLRVC DCH A KFISKVY REI+VRDRIRYHHFKDG CSC DYW
Sbjct: 481 LINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
BLAST of Carg17984 vs. TrEMBL
Match:
tr|A0A1U8A6C4|A0A1U8A6C4_NELNU (pentatricopeptide repeat-containing protein At3g62890-like OS=Nelumbo nucifera OX=4432 GN=LOC104597525 PE=4 SV=1)
HSP 1 Score: 723.0 bits (1865), Expect = 5.3e-205
Identity = 405/566 (71.55%), Postives = 468/566 (82.69%), Query Frame = 0
Query: 18 LLRFASISYAQMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQY 77
L FAS+ YAQ++FD P PDLF+YNT+IKAHA + SS S FRS++RD LVPNQY
Sbjct: 65 LSSFASLPYAQLLFDQIPSPDLFIYNTMIKAHASTTDSSCSSLLIFRSILRDSSLVPNQY 124
Query: 78 SFAFAFKGCGNAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWS 137
+F F K C +G+ EG+QVR +A+K+GLE+N+FV NALI MY N G V DAR VFDWS
Sbjct: 125 TFVFVLKACSQGLGIREGQQVRVYAMKVGLESNVFVTNALIQMYANCGSVDDARMVFDWS 184
Query: 138 TIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 185 AQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 198 XXXXXXXGPNEYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCG 257
XXX PNE+TL S LAACANLVALDQG+W+HVYI K I + ++LLA LIDMY KCG
Sbjct: 245 XXXQTGPKPNEFTLTSVLAACANLVALDQGKWIHVYIDKVGIKMIEQLLASLIDMYAKCG 304
Query: 258 ELEFASKLFNSERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVAL 317
E+E AS +F+ E + + VWPWNAMIGGFAMHG S EAI+LFEQMK++ + PNK+TFVAL
Sbjct: 305 EIELASNVFHGEAGTRKTVWPWNAMIGGFAMHGLSHEAIDLFEQMKMKSIGPNKITFVAL 364
Query: 318 LNACSHGNRVEEGRGYFESMAGCFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLTP 377
LNACSHG VEEG+ YF+SM+ C G+EPE+EHYGCMVDLLGR+G LKEAEEII +MP+ P
Sbjct: 365 LNACSHGKLVEEGKWYFKSMSSCHGIEPEIEHYGCMVDLLGRAGLLKEAEEIILAMPMAP 424
Query: 378 DVAIWGALLSACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLRE 437
D IWGALL AC+ H+D EMG+RI K ++ELD H+GCHVLLANMYS +G W EA+ +RE
Sbjct: 425 DAVIWGALLGACRIHRDTEMGDRIAKAIKELDPYHVGCHVLLANMYSSSGRWKEAKAVRE 484
Query: 438 KIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGE 497
KI G KKTPGCSSIELNG FHQFLVGDRSHPQTK++Y+FLDEMT KLK+AGY+PE E
Sbjct: 485 KIESGGTKKTPGCSSIELNGVFHQFLVGDRSHPQTKQIYLFLDEMTMKLKLAGYVPELRE 544
Query: 498 VLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVY 557
VLLDIDD ED+ETAL +HSEKLAIAFGL+NT TPIRIVKNLRVC DCH AIKFISKVY
Sbjct: 545 VLLDIDDEEDKETALSRHSEKLAIAFGLINTEHGTPIRIVKNLRVCQDCHQAIKFISKVY 604
Query: 558 DREIVVRDRIRYHHFKDGACSCNDYW 584
+REI+VRDRIR+HHF++G CSC DYW
Sbjct: 605 EREIIVRDRIRFHHFRNGQCSCRDYW 630
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022927711.1 | 5.8e-288 | 99.65 | pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata] ... | [more] |
| XP_023529533.1 | 3.3e-283 | 98.05 | pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp... | [more] |
| XP_022967088.1 | 9.3e-278 | 96.63 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima] | [more] |
| XP_008450449.1 | 1.2e-253 | 87.92 | PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis m... | [more] |
| XP_004139110.1 | 5.9e-248 | 87.74 | PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis s... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G48910.1 | 2.3e-121 | 43.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G66520.1 | 3.3e-120 | 51.43 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G59720.1 | 2.2e-116 | 37.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G08070.1 | 3.8e-116 | 34.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G62890.1 | 5.0e-116 | 49.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
