CSPI01G30140 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G30140
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing protein
LocationChr1 : 24652007 .. 24652813 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATCTCTAAGCTATAGTAAGTCTGTTTCCATATACAAAATTATCAGGCACATGGCCGCCGTCAAGGTGTGGCCGGATTGATCGATATGTATGCAAAATGCATGGCGGCTCTCAATGTGATATTCTTCAAGCTTCTTCACTAAGTCACTGTCTTCAGAAAAATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAATAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGGTCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACCAAGTTTCGTTCTTTAATCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAGGGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAATGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGGTAATTACATGA

mRNA sequence

ATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAATAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGGTCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACCAAGTTTCGTTCTTTAATCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAGGGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAATGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGGTAATTACATGA

Coding sequence (CDS)

ATGGTACGATGCGACTTTTTACTCAGTTCCTGCAAATCATTTCGCCAAATCAAACAAGTTCACGCCCGATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACTAATAAACTCCTTAAACAACTTTCCTCAATATTCGCTCCAATTTCCTATGCCCACATGGTGTTCGACCATTTTCCTCAACCAGATCTCTTCCTCTACAACACCATTATCAAGGTCCTGGCATTTTCAACCACTTCTTCTGCTGATTCTTTCACCAAGTTTCGTTCTTTAATCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTTGCCTTCAAGGGCTGTGGCAGTGGTGTTGGGGTTCTGGAAGGGGAGCAAGTTCGTGTTCATGCTATTAAACTTGGTCTGGAAAACAATCTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGATTTTGTTGTGGATGCTAGAAAGGTGTTTGATTGGAGTCCCAATAGAGATATGTATTCCTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAAAATGGATGAAGCTCGGCAACTGTTTGATGAAATGCCTGAAAAAGATGTTGTGTCGTGGACAACAATGATTTCTGGTTGTCTTCAGGTAATTACATGA
Homology
[Close]
BLAST of CSPI01G30140 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.3e-34
Identity = 80/204 (39.22%), Postives = 119/204 (58.33%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQ--LSSIFAPISYAHMVFDHFPQPD 66
           LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 67  LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
           L ++NT+ +  A S  S   S  K    +    L+PN Y+F F  K C       EG+Q+
Sbjct: 99  LLIWNTMFRGHALS--SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158

Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
             H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218

Query: 187 DEARQLFDEMPEKDVVSWTTMISG 209
           + A++LFDE+P KDVVSW  MISG
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISG 240

[Close]
BLAST of CSPI01G30140 vs. Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 4.5e-32
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 12  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYN 71
           KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N
Sbjct: 50  KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109

Query: 72  TIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAI 131
           ++I+  A S+T    + T FR ++    + P++YSF F  K C +  G  EG Q+    I
Sbjct: 110 SVIRAYANSSTPEV-ALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 169

Query: 132 KLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQ 191
           K GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR 
Sbjct: 170 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 229

Query: 192 LFDEMPEKDVVSWTTMISG 209
           LFDEM E++V SW  MISG
Sbjct: 230 LFDEMEERNVESWNFMISG 246

[Close]
BLAST of CSPI01G30140 vs. Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 1 

Query: 8   LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFL 67
           L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FL
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI-EDMDYATRLFNQVSNPNVFL 76

Query: 68  YNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVH 127
           YN+II+    ++    D    ++ L+R    +P++++F F FK C S      G+QV  H
Sbjct: 77  YNSIIRAYTHNSLY-CDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136

Query: 128 AIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEA 187
             K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 188 RQLFDEMPEKDVVSWTTMISG 209
           + LF  M +K +VSWT MISG
Sbjct: 197 KGLFHLMLDKTIVSWTAMISG 215

[Close]
BLAST of CSPI01G30140 vs. Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 79/213 (37.09%), Postives = 111/213 (52.11%), Query Frame = 1 

Query: 8   LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK----QLSSIFAPISYAHMVFDHFPQP 67
           L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +P
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQIVFDGFDRP 80

Query: 68  DLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV-----PNQYSFAFAFKGCGSGVGV 127
           D FL+N +I+   FS +   +     RSL+  +R++      N Y+F    K C +    
Sbjct: 81  DTFLWNLMIR--GFSCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 140

Query: 128 LEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGY 187
            E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY
Sbjct: 141 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 200

Query: 188 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQ 212
            + GKMD A  LF +M EK+ +SWTTMISG +Q
Sbjct: 201 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224

[Close]
BLAST of CSPI01G30140 vs. Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.1e-29
Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHF 66
           LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F   
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77

Query: 67  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 126
             P+LF++N +I+   FST +       F + +   R+ P+  +F F  K       VL 
Sbjct: 78  QNPNLFVFNLLIR--CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 137

Query: 127 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 186
           GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 197

Query: 187 LGKMDEARQLFDEMPEKDVVSWTTMISG 209
            G ++ AR++FDEMP +++ +W+ MI+G
Sbjct: 198 CGMVENAREMFDEMPHRNLFTWSIMING 223

[Close]
BLAST of CSPI01G30140 vs. TrEMBL
Match: A0A0A0LX83_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612890 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 6.4e-118
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
           MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1   MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60

Query: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
           PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVPNQYSFAFAFKGCGSGVGVLE
Sbjct: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE 120

Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
           GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180

Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
           LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 212

[Close]
BLAST of CSPI01G30140 vs. TrEMBL
Match: F6GUA4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01520 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-64
Identity = 120/198 (60.61%), Postives = 154/198 (77.78%), Query Frame = 1 

Query: 16  QIKQVHARLITTGLILHPIPTNKLLKQL-SSIFAPISYAHMVFDHFPQPDLFLYNTIIKV 75
           QIKQ HA LITTGLILHPI  NKLLK L +S F  +SYAH +FD  P+PD+F+YNT+IK 
Sbjct: 3   QIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMIKA 62

Query: 76  LAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLE 135
            A   TSS +S   F S++R    +PN+Y+F F FK CG+G+GVLEGEQ+RVHAIK+GLE
Sbjct: 63  HAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLE 122

Query: 136 NNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEM 195
           +NLFVTNA+I MY N   V +AR+VFDWS ++D+YSWNIM+ GY   G++  A+++FDEM
Sbjct: 123 SNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEM 182

Query: 196 PEKDVVSWTTMISGCLQV 213
            E+DVVSWTT+I+G +QV
Sbjct: 183 SERDVVSWTTIIAGYVQV 200

[Close]
BLAST of CSPI01G30140 vs. TrEMBL
Match: A0A0B2QXA0_GLYSO (Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_014027 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.5e-62
Identity = 117/206 (56.80%), Postives = 152/206 (73.79%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLF 66
           L+ SCKS +QIKQ HA+LITT LI HP+  NKLLK  +   A +SYAH +FD  PQPDLF
Sbjct: 22  LIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAAC--ASLSYAHKLFDQIPQPDLF 81

Query: 67  LYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRV 126
           +YNT+IK  + S  S  +S   FRSL +D  L PN+YSF FAF  CG+G+GV EGEQVR+
Sbjct: 82  IYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRI 141

Query: 127 HAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDE 186
           HA+K+GLENN+FV NALIGMY     V +++KVF W+ +RD+YSWN +++ Y   G M  
Sbjct: 142 HAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSL 201

Query: 187 ARQLFDEMPEKDVVSWTTMISGCLQV 213
           A++LFD M E+DVVSW+T+I+G +QV
Sbjct: 202 AKELFDGMRERDVVSWSTIIAGYVQV 225

[Close]
BLAST of CSPI01G30140 vs. TrEMBL
Match: K7MIR4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G204800 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.5e-62
Identity = 117/206 (56.80%), Postives = 152/206 (73.79%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLF 66
           L+ SCKS +QIKQ HA+LITT LI HP+  NKLLK  +   A +SYAH +FD  PQPDLF
Sbjct: 23  LIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAAC--ASLSYAHKLFDQIPQPDLF 82

Query: 67  LYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRV 126
           +YNT+IK  + S  S  +S   FRSL +D  L PN+YSF FAF  CG+G+GV EGEQVR+
Sbjct: 83  IYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRI 142

Query: 127 HAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDE 186
           HA+K+GLENN+FV NALIGMY     V +++KVF W+ +RD+YSWN +++ Y   G M  
Sbjct: 143 HAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSL 202

Query: 187 ARQLFDEMPEKDVVSWTTMISGCLQV 213
           A++LFD M E+DVVSW+T+I+G +QV
Sbjct: 203 AKELFDGMRERDVVSWSTIIAGYVQV 226

[Close]
BLAST of CSPI01G30140 vs. TrEMBL
Match: A0A0L9VJ00_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g060100 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-60
Identity = 114/206 (55.34%), Postives = 149/206 (72.33%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLF 66
           L+ SCKS +QIKQ H++L+TT LI HP+  +KLLK  +  +  ISYAH +FD  PQPDLF
Sbjct: 23  LIDSCKSMQQIKQTHSQLVTTALISHPVSAHKLLKLTA--YVSISYAHKLFDQIPQPDLF 82

Query: 67  LYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRV 126
           +YNT+IK  +    S  +SF  FRSLIRD     N+YSF +AF  CG+G+G+ EG+QVRV
Sbjct: 83  IYNTMIKAHSMLPHSCHNSFAVFRSLIRDSGFFANRYSFVYAFGACGNGLGMQEGQQVRV 142

Query: 127 HAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDE 186
           HA+K+GLENN+FV NALIGMY     V +  KVF W+ +RD+YSWN M++ Y   G M  
Sbjct: 143 HAVKIGLENNIFVLNALIGMYGKWGLVEEGWKVFQWAVDRDLYSWNTMIAAYVGSGDMIR 202

Query: 187 ARQLFDEMPEKDVVSWTTMISGCLQV 213
           A++LFD M EKDVVSW+T+I+G +QV
Sbjct: 203 AKELFDGMQEKDVVSWSTIIAGYVQV 226

[Close]
BLAST of CSPI01G30140 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 80/204 (39.22%), Postives = 119/204 (58.33%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQ--LSSIFAPISYAHMVFDHFPQPD 66
           LL +CK+ + ++ +HA++I  GL       +KL++   LS  F  + YA  VF    +P+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 67  LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
           L ++NT+ +  A S  S   S  K    +    L+PN Y+F F  K C       EG+Q+
Sbjct: 99  LLIWNTMFRGHALS--SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158

Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
             H +KLG + +L+V  +LI MYV    + DA KVFD SP+RD+ S+  ++ GYA  G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218

Query: 187 DEARQLFDEMPEKDVVSWTTMISG 209
           + A++LFDE+P KDVVSW  MISG
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISG 240

[Close]
BLAST of CSPI01G30140 vs. TAIR10
Match: AT4G18840.1 (AT4G18840.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-33
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 1 

Query: 12  KSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAP--ISYAHMVFDHFPQPDLFLYN 71
           KS  +I+Q HA ++ TGL       +KL+   ++   P  +SYAH + +    P+ F +N
Sbjct: 50  KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109

Query: 72  TIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAI 131
           ++I+  A S+T    + T FR ++    + P++YSF F  K C +  G  EG Q+    I
Sbjct: 110 SVIRAYANSSTPEV-ALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI 169

Query: 132 KLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQ 191
           K GL  ++FV N L+ +Y    +   ARKV D  P RD  SWN +LS Y   G +DEAR 
Sbjct: 170 KSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARA 229

Query: 192 LFDEMPEKDVVSWTTMISG 209
           LFDEM E++V SW  MISG
Sbjct: 230 LFDEMEERNVESWNFMISG 246

[Close]
BLAST of CSPI01G30140 vs. TAIR10
Match: AT2G20540.1 (AT2G20540.1 mitochondrial editing factor 21)

HSP 1 Score: 137.5 bits (345), Expect = 9.7e-33
Identity = 77/201 (38.31%), Postives = 113/201 (56.22%), Query Frame = 1 

Query: 8   LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFL 67
           L   KS  + K+++A +I  GL        K++     I   + YA  +F+    P++FL
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKI-EDMDYATRLFNQVSNPNVFL 76

Query: 68  YNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVH 127
           YN+II+    ++    D    ++ L+R    +P++++F F FK C S      G+QV  H
Sbjct: 77  YNSIIRAYTHNSLY-CDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136

Query: 128 AIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEA 187
             K G   ++   NALI MY+  D +VDA KVFD    RD+ SWN +LSGYARLG+M +A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 188 RQLFDEMPEKDVVSWTTMISG 209
           + LF  M +K +VSWT MISG
Sbjct: 197 KGLFHLMLDKTIVSWTAMISG 215

[Close]
BLAST of CSPI01G30140 vs. TAIR10
Match: AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 9.1e-31
Identity = 79/213 (37.09%), Postives = 111/213 (52.11%), Query Frame = 1 

Query: 8   LSSCKSFRQIKQVHARLITTGLILHPIPTNKLLK----QLSSIFAPISYAHMVFDHFPQP 67
           L  C    ++KQ+HAR++ TGL+       K L       SS F P  YA +VFD F +P
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP--YAQIVFDGFDRP 80

Query: 68  DLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLV-----PNQYSFAFAFKGCGSGVGV 127
           D FL+N +I+   FS +   +     RSL+  +R++      N Y+F    K C +    
Sbjct: 81  DTFLWNLMIR--GFSCSDEPE-----RSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAF 140

Query: 128 LEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGY 187
            E  Q+     KLG EN+++  N+LI  Y        A  +FD  P  D  SWN ++ GY
Sbjct: 141 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 200

Query: 188 ARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQ 212
            + GKMD A  LF +M EK+ +SWTTMISG +Q
Sbjct: 201 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ 224

[Close]
BLAST of CSPI01G30140 vs. TAIR10
Match: AT5G06540.1 (AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 68/208 (32.69%), Postives = 113/208 (54.33%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL---SSIFAP---ISYAHMVFDHF 66
           LL SC SF  +K +H  L+ T LI      ++LL      S+   P   + YA+ +F   
Sbjct: 18  LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQI 77

Query: 67  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 126
             P+LF++N +I+   FST +       F + +   R+ P+  +F F  K       VL 
Sbjct: 78  QNPNLFVFNLLIR--CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 137

Query: 127 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 186
           GEQ     ++ G +N+++V N+L+ MY N  F+  A ++F     RD+ SW  M++GY +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 197

Query: 187 LGKMDEARQLFDEMPEKDVVSWTTMISG 209
            G ++ AR++FDEMP +++ +W+ MI+G
Sbjct: 198 CGMVENAREMFDEMPHRNLFTWSIMING 223

[Close]
BLAST of CSPI01G30140 vs. NCBI nr
Match: gi|449442683|ref|XP_004139110.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus])

HSP 1 Score: 431.4 bits (1108), Expect = 9.2e-118
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 1 

Query: 1   MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
           MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1   MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60

Query: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
           PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIR+ERLVPNQYSFAFAFKGCGSGVGVLE
Sbjct: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE 120

Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
           GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180

Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
           LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 212

[Close]
BLAST of CSPI01G30140 vs. NCBI nr
Match: gi|659099142|ref|XP_008450449.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 2.3e-113
Identity = 202/212 (95.28%), Postives = 209/212 (98.58%), Query Frame = 1 

Query: 1   MVRCDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60
           MVRCDFLL SCKSFRQIKQVHA+LIT+GLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF
Sbjct: 1   MVRCDFLLGSCKSFRQIKQVHAQLITSGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHF 60

Query: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLE 120
           PQPDLFLYNTIIKVLAFSTTSSADSFT+FRSLIR+ERLVPNQYSFAFAFK CGSGVGVLE
Sbjct: 61  PQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACGSGVGVLE 120

Query: 121 GEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYAR 180
           GEQVRVHA+KLGLENNLFVTNALIGMYVNLDFVVDARKVF+WSP RDMYSWNIMLSGYAR
Sbjct: 121 GEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNIMLSGYAR 180

Query: 181 LGKMDEARQLFDEMPEKDVVSWTTMISGCLQV 213
           LGKMDEARQLFDEMPE+DVVSWTTMISGCLQV
Sbjct: 181 LGKMDEARQLFDEMPERDVVSWTTMISGCLQV 212

[Close]
BLAST of CSPI01G30140 vs. NCBI nr
Match: gi|225435554|ref|XP_002283117.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Vitis vinifera])

HSP 1 Score: 265.8 bits (678), Expect = 6.7e-68
Identity = 126/208 (60.58%), Postives = 160/208 (76.92%), Query Frame = 1 

Query: 6   FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQL-SSIFAPISYAHMVFDHFPQPD 65
           F L SCKS  QIKQ HA LITTGLILHPI  NKLLK L +S F  +SYAH +FD  P+PD
Sbjct: 20  FSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPD 79

Query: 66  LFLYNTIIKVLAFSTTSSADSFTKFRSLIRDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 125
           +F+YNT+IK  A   TSS +S   F S++R    +PN+Y+F F FK CG+G+GVLEGEQ+
Sbjct: 80  VFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQI 139

Query: 126 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 185
           RVHAIK+GLE+NLFVTNA+I MY N   V +AR+VFDWS ++D+YSWNIM+ GY   G++
Sbjct: 140 RVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEI 199

Query: 186 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
             A+++FDEM E+DVVSWTT+I+G +QV
Sbjct: 200 GRAKEMFDEMSERDVVSWTTIIAGYVQV 227

[Close]
BLAST of CSPI01G30140 vs. NCBI nr
Match: gi|1009166614|ref|XP_015901688.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 262.7 bits (670), Expect = 5.7e-67
Identity = 130/208 (62.50%), Postives = 158/208 (75.96%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDL 66
           LL SC S  QIKQ HA +ITTGLIL PIP NKLLK L+ S FA +SYAH VFD  P PD+
Sbjct: 30  LLESCMSLNQIKQAHAHMITTGLILRPIPANKLLKLLAFSSFASLSYAHRVFDQIPTPDI 89

Query: 67  FLYNTIIKVLAFSTTSSADSFTKFRSLI-RDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
           F +NT+IK    S TSS D+   FRS++ +   ++PNQY+F F  K CG+G+GVLEGEQV
Sbjct: 90  FHFNTMIKAHILSPTSSHDALMLFRSMMMQGSSILPNQYTFVFVLKACGNGLGVLEGEQV 149

Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
           RVHAIK+GLE NLFVTNALIGM+V    V DA KVFDWS +RD+YSWNIM+ GY  LGKM
Sbjct: 150 RVHAIKVGLEGNLFVTNALIGMHVKWGLVEDATKVFDWSTDRDLYSWNIMVGGYVGLGKM 209

Query: 187 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
           + A +LF+ M E+DVVSW+T+I+G +QV
Sbjct: 210 NRAMELFNGMRERDVVSWSTIIAGYVQV 237

[Close]
BLAST of CSPI01G30140 vs. NCBI nr
Match: gi|1009166612|ref|XP_015901687.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 262.7 bits (670), Expect = 5.7e-67
Identity = 130/208 (62.50%), Postives = 158/208 (75.96%), Query Frame = 1 

Query: 7   LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQPDL 66
           LL SC S  QIKQ HA +ITTGLIL PIP NKLLK L+ S FA +SYAH VFD  P PD+
Sbjct: 96  LLESCMSLNQIKQAHAHMITTGLILRPIPANKLLKLLAFSSFASLSYAHRVFDQIPTPDI 155

Query: 67  FLYNTIIKVLAFSTTSSADSFTKFRSLI-RDERLVPNQYSFAFAFKGCGSGVGVLEGEQV 126
           F +NT+IK    S TSS D+   FRS++ +   ++PNQY+F F  K CG+G+GVLEGEQV
Sbjct: 156 FHFNTMIKAHILSPTSSHDALMLFRSMMMQGSSILPNQYTFVFVLKACGNGLGVLEGEQV 215

Query: 127 RVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKM 186
           RVHAIK+GLE NLFVTNALIGM+V    V DA KVFDWS +RD+YSWNIM+ GY  LGKM
Sbjct: 216 RVHAIKVGLEGNLFVTNALIGMHVKWGLVEDATKVFDWSTDRDLYSWNIMVGGYVGLGKM 275

Query: 187 DEARQLFDEMPEKDVVSWTTMISGCLQV 213
           + A +LF+ M E+DVVSW+T+I+G +QV
Sbjct: 276 NRAMELFNGMRERDVVSWSTIIAGYVQV 303

The following BLAST results are available for this feature:
BLAST of CSPI01G30140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR21_ARATH6.3e-3439.22Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP321_ARATH4.5e-3239.20Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN... [more]
PP165_ARATH1.7e-3138.31Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN... [more]
PP449_ARATH1.6e-2937.09Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN... [more]
PP367_ARATH2.1e-2932.69Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN... [more]
BLAST of CSPI01G30140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX83_CUCSA6.4e-11899.53Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612890 PE=4 SV=1[more]
F6GUA4_VITVI1.4e-6460.61Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g01520 PE=4 SV=... [more]
A0A0B2QXA0_GLYSO6.5e-6256.80Pentatricopeptide repeat-containing protein OS=Glycine soja GN=glysoja_014027 PE... [more]
K7MIR4_SOYBN6.5e-6256.80Uncharacterized protein OS=Glycine max GN=GLYMA_16G204800 PE=4 SV=1[more]
A0A0L9VJ00_PHAAN2.7e-6055.34Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g060100 PE=4 SV=1[more]
BLAST of CSPI01G30140 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08070.13.6e-3539.22 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G18840.12.5e-3339.20 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT2G20540.19.7e-3338.31 mitochondrial editing factor 21[more]
AT5G66520.19.1e-3137.09 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G06540.11.2e-3032.69 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of CSPI01G30140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442683|ref|XP_004139110.1|9.2e-11899.53PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis s... [more]
gi|659099142|ref|XP_008450449.1|2.3e-11395.28PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis m... [more]
gi|225435554|ref|XP_002283117.1|6.7e-6860.58PREDICTED: pentatricopeptide repeat-containing protein At5g66520 isoform X1 [Vit... [more]
gi|1009166614|ref|XP_015901688.1|5.7e-6762.50PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X2... [more]
gi|1009166612|ref|XP_015901687.1|5.7e-6762.50PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G30140.1CSPI01G30140.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 169..198
score: 1.5
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 169..200
score: 5.6
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 64..100
score: 5.415coord: 167..201
score: 13.395coord: 136..166
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 14..212
score: 1.5
NoneNo IPR availablePANTHERPTHR24015:SF786SUBFAMILY NOT NAMEDcoord: 14..212
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G30140Lsi06G005070Bottle gourd (USVL1VR-Ls)cpilsiB059
CSPI01G30140MELO3C015213.2Melon (DHL92) v3.6.1cpimedB036
CSPI01G30140CsaV3_1G042570Cucumber (Chinese Long) v3cpicucB000
CSPI01G30140Cla97C03G063670Watermelon (97103) v2cpiwmbB043
CSPI01G30140Bhi02G001336Wax gourdcpiwgoB086
CSPI01G30140Cucsa.143210Cucumber (Gy14) v1cgycpiB208
CSPI01G30140CmaCh11G008330Cucurbita maxima (Rimu)cmacpiB084
CSPI01G30140CmoCh11G008430Cucurbita moschata (Rifu)cmocpiB078
CSPI01G30140CsGy1G029520Cucumber (Gy14) v2cgybcpiB002
CSPI01G30140Carg17984Silver-seed gourdcarcpiB0199
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G30140Wax gourdcpiwgoB021
CSPI01G30140Wax gourdcpiwgoB074
CSPI01G30140Wild cucumber (PI 183967)cpicpiB054
CSPI01G30140Cucurbita maxima (Rimu)cmacpiB058
CSPI01G30140Cucurbita maxima (Rimu)cmacpiB352
CSPI01G30140Cucurbita maxima (Rimu)cmacpiB543
CSPI01G30140Cucurbita maxima (Rimu)cmacpiB583
CSPI01G30140Cucurbita moschata (Rifu)cmocpiB050
CSPI01G30140Cucurbita moschata (Rifu)cmocpiB345
CSPI01G30140Cucurbita moschata (Rifu)cmocpiB534
CSPI01G30140Cucurbita moschata (Rifu)cmocpiB571
CSPI01G30140Cucumber (Chinese Long) v2cpicuB001
CSPI01G30140Cucumber (Chinese Long) v2cpicuB054
CSPI01G30140Melon (DHL92) v3.5.1cpimeB039
CSPI01G30140Melon (DHL92) v3.5.1cpimeB042
CSPI01G30140Watermelon (Charleston Gray)cpiwcgB049
CSPI01G30140Watermelon (97103) v1cpiwmB022
CSPI01G30140Watermelon (97103) v1cpiwmB076
CSPI01G30140Cucurbita pepo (Zucchini)cpecpiB268
CSPI01G30140Cucurbita pepo (Zucchini)cpecpiB350
CSPI01G30140Cucurbita pepo (Zucchini)cpecpiB655
CSPI01G30140Cucurbita pepo (Zucchini)cpecpiB705
CSPI01G30140Bottle gourd (USVL1VR-Ls)cpilsiB003
CSPI01G30140Bottle gourd (USVL1VR-Ls)cpilsiB045
CSPI01G30140Cucumber (Gy14) v2cgybcpiB301
CSPI01G30140Melon (DHL92) v3.6.1cpimedB035
CSPI01G30140Melon (DHL92) v3.6.1cpimedB064
CSPI01G30140Silver-seed gourdcarcpiB0506
CSPI01G30140Silver-seed gourdcarcpiB0558
CSPI01G30140Silver-seed gourdcarcpiB0954
CSPI01G30140Cucumber (Chinese Long) v3cpicucB064
CSPI01G30140Watermelon (97103) v2cpiwmbB028