Carg17978 (gene) Silver-seed gourd

Overview
NameCarg17978
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin ligase BIG BROTHER-like
LocationCucurbita_argyrosperma_scaffold_171 : 106326 .. 111495 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGAATCTGTTGTGGGAGGCAAACTCAAACAAGGAGGAGGCTCTGAATTCTCACCAACAACAACAACAACAAAACGAGCGAGAGAGAGCGAGAGAAATTCTCGTAGCCTTCAATCCCCAAATTCGCCGAGAAATCTATAGAACCATACCCAAACCAACCACAATCAATCATTCAACCATAGACCCTCTCTCTCTCTTTTCGCCATCAAAAGCGATCATTGTCGGCTTCTTTAATCTCTTCCCTCTTCCTTTGGAATCAATCCCTTTTCTTTTCCGATTTCACTTTGTTTTTGTTTCCGAGGCCGACCCTTTATCTTTCTTCGTCTCTTTCATCCGCTTCCCTCTTCTTCTCTCTGTTTCTGTTCTTCTACATTCCCCCCTTCACTTGTTCCACCAACTGGGTTCTTCTGCTTAGCTTTTGGTTTGTTGGGTTTCGGCGTCGGAGCTGCTTGGTTGTGTTGTGCGCATCGCTCCGGCGTTTGAATGTGAGTTTTGAGAACCTACATTTTGATTCACTCTGTTTTTCTTTTTGTTTCTGTTTTGTGCGGTTGTTTGTGGGTAATTTGGATGGAACAAGGGAAATTTGAGTATGGATAATTGCTTGCTTGATTTCCCTTTTGTGGTTTAGTGTTGGGTTTGATGTATGTTCTTAATCATCAACAATGAGGGTGTCCAATTCCGATGATGCTCTTTGATTGTTTTTTATTGTTTTTTGTTCATTGTTAATTCGTTTCTTATGGGATCTGGGTTGTGTTAGCTCGACGATTTGCTGAGAGATGGCTTTGGCTGCGACAGATAAATGTCTCGGCTGATTCGTGTAATTTGTGCTGTGTTTTACTGAATTACAGCTGCTTCTTTAATCTAGGAGATACCAAACTCATGGGTCTGGTTGTTGTTGCCCTGGTTCTCACATTTAAGGGCAAAATGAAACTGGGTTTACTTGTGTTGGAACAGTTTAGTTTAGCTGTGCTGTAGGCTTTGGAGTGGCTTTTTGCTGTTTTGATTTCTTTCTTGCAATGTTCTTTTGGTTTTATGACGTTTCTGCATTGAACAGAAGCTTTGGTGGATTCATTTGTATATGAAATGAGTTGGAACAACACGCATACAGAAGTTCATCATGTTAATACCCCTTATCCTTATAACACTGCTGGGAGTTTCCTGGAATATTTTGAAGGTCTTACCTACGAACATGTAAATTTCATATTTTCGGGCGCTTCACATTCTCAGGTACTTTCGATCTGCTTGCTTCTTTGTTCCAAACAGCTGTACTTGATTTGTTAACCTCTGCAATCGGAAGTCGTTTTTCTGTTTTTTTCGATATGCTGTTCTTTTGTCGTTCTTACTTCATGGAAGATTATGTTCTTTGTTTGTGAAATGAAGAGTGAAGTCTCTTTGCATTTCTTTGTTTTTTCTTCTTCTGACCTCCGTTTTCGAGTCGAATCTACTTTCAAGTTGAAAGTTGCCTTACCCTGTTTATAACCGATATGCTAGCAAAAGAAGTTTCGCACTGAACCATAGTGCTTCGCTCTCGAGTTTCTTGAATTAATTTGAACTGTAAATGGAGAATGACAATGTAACTCATTTAAGTTTCACATTTGCAGGAGACTGTTTATCCTCCTCTGAATTCAAACTTTTACAAGTTTGGGTTTTCAGATTTTGGGAGTCCTACCTATTACAACCCACCTCAAGCTTATAGGGTGCATGATCAAGAGCCCATAATTTATGAACATAGGAGGCTAGAAAACTCAGCAACTCAGCCTGATGTACAGAGCACAGTAAATCTTGAGTTGGAAGAATTTGCAAATACTACAGCATTTGACAACCATGTAGAATGTAAGTGATAGCTTTTCCAATTGTTCCATCCCTGGAAAAAGGTTTTTCCAATTGTTCTCCATCTGTTTGGTTCACCATTGAGGTTTCGTGGAGGTATGCAAAATATTTACTTCTGAAACTCTGAGATCCCACATCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCGAATTCGTTTTAAAACCGTGAGGCTGACAGCGATACGTAATGGATCAAAGCAGACAATATCTACTAGCAGTGGGGTTGGGCTGTTACAAATGGTATTAGAGTTAGATACCGGGTGGTGTGTCAACGAGGATGCTGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAAGGGGAATGAAACATTCTTTATAAGGGTGTGGAAACCTTTCCCTAACAAACACGTTTTAAAACCGTGAGGTTGGCCATAGTGGACAATATCGGCTAGCGGTGAGCTTGAGCTATTACAAATGGTGTTAGAGGTCGACATCGGACGGTGTGCCAGCGAGGAAGTTGACCCCCAAAGGGGGTGAATTGTGAGATTCCTCATCGATTGGAGGGGGGAATGAAACATTCCTCATAAGGGTGTGGAAACTTCTCCCTAGCAAATGTGTTTTAAAACCGTGAGGCTAACCAAAGTGGACAATATCTGCTAGTGGTGAGCTTAGGCTATTACAAATGGTGTTAGAGGAAGACATCGGGCAGTGTGTCAGCGAGGAAGCTGTCCTCCCAAAGGGGGTGAATTATGAGATTCCACATCGATTGGAGGGGGGGAATGAAACATTCCTCATAAGGGCGTGGAAATCTCTCCCTAGCAAACGTGTTTTAAAACCGTGAGGTTGACGGCAATACGTAACAGGCCGAAGCGGACAATATCTGCTAGCAGTGGGCTTGGGCGGTTACAAAACCAATGTTCACAGCAAGAGCGAAACATCAAAAGATACATACATCAATTACATTTTTCATTGCTTCTGAGGTTTATTTGTTTATTTATATTTTAAGTTTAAGATTCATTGGCATAGAGTATGACATATACTTCTTCATTGAACATAATTGAGATGAACAGATACAATTAGATATATATTGTTGAGGAATACCGGTGTTCATATCCGTACTTCGTTTCTCAAGATCTCGTGTGCTTAAGGTTATATCTTGAGAAAACACTGCATACAAGGATGAACTTAATAACTCTTGTAGATGATTCTTATAAGTTGTTTAATTGAACACCAAAAAAGAATACGGTTCTTAAAATATAGATTTCCCTTGAATTTAGTTATTACTTCACCTTAAATGTTTCATAGTTTTCCTCTCTCTGATAGCTCTAACGGTCGACTCGAACAATTCTCTTTCGCTTTCTCTCAGGTCCAAGAGGACGCCATAATTCACATGATTTTCAGGTTTGTGGCTTTTATATGGTTTGCAGATCAACTTTCTACCTGAAACGTGTTTATAAAACTTGTTTGGCCTGGTGTTTTGTTCTCGATCGTTGACGAACGGATGCTTTATCTAAGTGTAGGTTGTTTGGCAAGACAATGTCGATCCTGATAATATGACTTACGAGGTTAGTTCGTTTGGAAAAAATTACTTGTTTTACGGAACTTGCTTCAACAAAAGGGTACCGACACCCGAAACCGAGACAATGTATTACAATATCTATAGCTACATAAGCTGAAATAAGTTTTCTTTTGGGTAACTAGGGCAACTATATAGGCCTGCTGAACATTTTTCTAAGTAAGATTTAACAAATTTCATCCTATATGGCCTCTGATTATCTTGAACTATCTGCAATTTTTTACAATACTTGGATAAAAATCTATAATATTTCGAGTTCAGGAATTACTAGAGTTGGGTGAGACAGTTGGAACTCAAAGTCGAGGTCTTTCACAAGAATTGATCGCTTTGCTTCCGATATCAAAGTACAAATATAGTTTCTTCTCGAGGAAAAAATCTCGTGGAGAGAGGTATGTGATAGTTCATGATGTTTCTTTCCTTGACGTTTATTTGTCTCTGAGATTGACTCGTAATCGTGCTATCCTCATTATGTCGTGTACTTACAAAGAACGCTGAATGAACGTTTTGGATTCAATGCTTTTCTATTATATCATACCTGCACCTGATTGAGAGTCCAGTTTGTTCCTGTCTACTTCTTTGAATCTCATGTACTTTTCTGGATGTAGATGTGTGATATGCCAAATGGAATATAAACGAGGCGATCGACGGATCACTCTGCCATGCAAACATATCTACCATGCTGGTTGTGGAACCAAATGGCTCAGCATCAACAAGGTATTACTATTAGTTTAGTAGGACTGAATGTGTGCTGCCATTGTTGGACTGATATAACTCGAGACCTCTGTTCTGTTACAGCTTTTACACGTAGTCTTTGAACCCAATTGCCATCCTCCTTTTAAAACATAGCACCCCGCTCTTTTCTCATTCATATGCATCTCAAAACCAACCAAGCAAGGGTTAACATTGTGTAGTCGGGAATGGAATAGAGTGGTAACGGCTAATAGCTAGCCTATTCACTCAACCTTCTTTGAAGGGCTTCCCTTTTTTCATTTCCTTGTTTTGTCCGTTAGATTTTCAGTAGCTATAAAAAAAATATCTCAAAGTGGAAAGTCTTCTCCTTCTCCTGTTAGTTTAGTAAGACTGAATGTGTGCTGCCATTGTTGACTGATATAACTCGAAATCTCTGTTCTGTTACAGCTTTGCCTAGAACTTCCAAAGCTTTTACCCGTAGACTTTGAACCCAATTCCCATCCTCTTAAAACATAGCACCCCGCTCTTTTCTAATTCATATGCATCTCAAAACCGACCAAGTAAGAGTTAACGTTGTGTAGTCAGTAATAGAGTAGTAACAACTAATAGCTAGCCTATTCACTCAATCTTCCTTAAAAGGGCTACCTTTTTTCATTTCCTTGTTTTGTCGGTTAGCCGTTATAAAAAAATCCTAAAGTGGAAAGCCTTCTCCTTCATCTACACATCTACACAATCTTCGCATAATAACCACGTTCATTCCGTAGCTAAAACGGGTAATCAATGGTAGACTTTTAGGTGTCGTTTAGTATAACAAAAAGTGTAGCAGCATCGAATACCCGTGTTGTGAATGAGTGAGTGATTGAGTAATAACGTTGTGGTTTTGCAGGCTTGCCCCATATGTTACACAGAGGTGTTTGGTGATACTTCAAAACACTGAGTGAGTGTGTTGATTGTTAGAGGAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAACATAATGGTGTTTGTAAGTTAATTGTTAGAAATTTTTGCGAGGAAATTCACTTGATTTTCTCTCATA

mRNA sequence

AATGGAATCTGTTGTGGGAGGCAAACTCAAACAAGGAGGAGGCTCTGAATTCTCACCAACAACAACAACAACAAAACGAGCGAGAGAGAGCGAGAGAAATTCTCGTAGCCTTCAATCCCCAAATTCGCCGAGAAATCTATAGAACCATACCCAAACCAACCACAATCAATCATTCAACCATAGACCCTCTCTCTCTCTTTTCGCCATCAAAAGCGATCATTGTCGGCTTCTTTAATCTCTTCCCTCTTCCTTTGGAATCAATCCCTTTTCTTTTCCGATTTCACTTTGTTTTTGTTTCCGAGGCCGACCCTTTATCTTTCTTCGTCTCTTTCATCCGCTTCCCTCTTCTTCTCTCTGTTTCTGTTCTTCTACATTCCCCCCTTCACTTGTTCCACCAACTGGGTTCTTCTGCTTAGCTTTTGGTTTGTTGGGTTTCGGCGTCGGAGCTGCTTGGTTGTGTTGTGCGCATCGCTCCGGCGTTTGAATAAGCTTTGGTGGATTCATTTGTATATGAAATGAGTTGGAACAACACGCATACAGAAGTTCATCATGTTAATACCCCTTATCCTTATAACACTGCTGGGAGTTTCCTGGAATATTTTGAAGGTCTTACCTACGAACATGTAAATTTCATATTTTCGGGCGCTTCACATTCTCAGGAGACTGTTTATCCTCCTCTGAATTCAAACTTTTACAAGTTTGGGTTTTCAGATTTTGGGAGTCCTACCTATTACAACCCACCTCAAGCTTATAGGGTGCATGATCAAGAGCCCATAATTTATGAACATAGGAGGCTAGAAAACTCAGCAACTCAGCCTGATGTACAGAGCACAGTAAATCTTGAGTTGGAAGAATTTGCAAATACTACAGCATTTGACAACCATGTAGAATGTCCAAGAGGACGCCATAATTCACATGATTTTCAGGTTGTTTGGCAAGACAATGTCGATCCTGATAATATGACTTACGAGGAATTACTAGAGTTGGGTGAGACAGTTGGAACTCAAAGTCGAGGTCTTTCACAAGAATTGATCGCTTTGCTTCCGATATCAAAGTACAAATATAGTTTCTTCTCGAGGAAAAAATCTCGTGGAGAGAGATGTGTGATATGCCAAATGGAATATAAACGAGGCGATCGACGGATCACTCTGCCATGCAAACATATCTACCATGCTGGTTGTGGAACCAAATGGCTCAGCATCAACAAGGCTTGCCCCATATGTTACACAGAGGTGTTTGGTGATACTTCAAAACACTGAGTGAGTGTGTTGATTGTTAGAGGAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAACATAATGGTGTTTGTAAGTTAATTGTTAGAAATTTTTGCGAGGAAATTCACTTGATTTTCTCTCATA

Coding sequence (CDS)

ATGAGTTGGAACAACACGCATACAGAAGTTCATCATGTTAATACCCCTTATCCTTATAACACTGCTGGGAGTTTCCTGGAATATTTTGAAGGTCTTACCTACGAACATGTAAATTTCATATTTTCGGGCGCTTCACATTCTCAGGAGACTGTTTATCCTCCTCTGAATTCAAACTTTTACAAGTTTGGGTTTTCAGATTTTGGGAGTCCTACCTATTACAACCCACCTCAAGCTTATAGGGTGCATGATCAAGAGCCCATAATTTATGAACATAGGAGGCTAGAAAACTCAGCAACTCAGCCTGATGTACAGAGCACAGTAAATCTTGAGTTGGAAGAATTTGCAAATACTACAGCATTTGACAACCATGTAGAATGTCCAAGAGGACGCCATAATTCACATGATTTTCAGGTTGTTTGGCAAGACAATGTCGATCCTGATAATATGACTTACGAGGAATTACTAGAGTTGGGTGAGACAGTTGGAACTCAAAGTCGAGGTCTTTCACAAGAATTGATCGCTTTGCTTCCGATATCAAAGTACAAATATAGTTTCTTCTCGAGGAAAAAATCTCGTGGAGAGAGATGTGTGATATGCCAAATGGAATATAAACGAGGCGATCGACGGATCACTCTGCCATGCAAACATATCTACCATGCTGGTTGTGGAACCAAATGGCTCAGCATCAACAAGGCTTGCCCCATATGTTACACAGAGGTGTTTGGTGATACTTCAAAACACTGA

Protein sequence

MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFYKFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAFDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVFGDTSKH
Homology
[Close]
BLAST of Carg17978 vs. NCBI nr
Match: XP_022927874.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022927882.1 E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata])

HSP 1 Score: 528.1 bits (1359), Expect = 1.6e-146
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 

Query: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60
           MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY
Sbjct: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60

Query: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAF 120
           KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAF
Sbjct: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAF 120

Query: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180
           DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK
Sbjct: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180

Query: 181 YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240
           YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV
Sbjct: 181 YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240

Query: 241 FGDTSKH 248
           FGDTSKH
Sbjct: 241 FGDTSKH 247

[Close]
BLAST of Carg17978 vs. NCBI nr
Match: XP_023531796.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.6 bits (1355), Expect = 4.7e-146
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0 

Query: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60
           MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY
Sbjct: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60

Query: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAF 120
           KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQST NLELEEFANTTAF
Sbjct: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTANLELEEFANTTAF 120

Query: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180
           DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK
Sbjct: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180

Query: 181 YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240
           YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV
Sbjct: 181 YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240

Query: 241 FGDTSKH 248
           FGDTSKH
Sbjct: 241 FGDTSKH 247

[Close]
BLAST of Carg17978 vs. NCBI nr
Match: XP_022968110.1 (E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima])

HSP 1 Score: 519.6 bits (1337), Expect = 5.7e-144
Identity = 243/247 (98.38%), Postives = 243/247 (98.38%), Query Frame = 0 

Query: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60
           MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSG SHSQETVYPPLNSNFY
Sbjct: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGTSHSQETVYPPLNSNFY 60

Query: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTAF 120
           KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEH RLENSATQPDVQSTVNLE EEFANTTAF
Sbjct: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHSRLENSATQPDVQSTVNLEFEEFANTTAF 120

Query: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180
           DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK
Sbjct: 121 DNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISK 180

Query: 181 YKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240
           YKYSFFSRKKSR ERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV
Sbjct: 181 YKYSFFSRKKSRRERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEV 240

Query: 241 FGDTSKH 248
           FGDTSKH
Sbjct: 241 FGDTSKH 247

[Close]
BLAST of Carg17978 vs. NCBI nr
Match: XP_011660125.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER [Cucumis sativus] >XP_011660126.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER [Cucumis sativus] >KGN66475.1 hypothetical protein Csa_1G613470 [Cucumis sativus])

HSP 1 Score: 486.9 bits (1252), Expect = 4.1e-134
Identity = 230/247 (93.12%), Postives = 235/247 (95.14%), Query Frame = 0 

Query: 1   MSWNNT-HTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNF 60
           MSWN+T  TEVHHVNT YPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQE VYPPLNSNF
Sbjct: 1   MSWNSTPQTEVHHVNTNYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQENVYPPLNSNF 60

Query: 61  YKFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTA 120
           YKFGFSDFGSP+YYNPPQAYR+HD EPIIYEHRRLENSATQP++QSTVN E EE  NT A
Sbjct: 61  YKFGFSDFGSPSYYNPPQAYRMHDHEPIIYEHRRLENSATQPNLQSTVNPEFEEITNTIA 120

Query: 121 FDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180
           FDNHVECPR  HNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS
Sbjct: 121 FDNHVECPRRHHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180

Query: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240
           KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE
Sbjct: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240

Query: 241 VFGDTSK 247
           VFGDTSK
Sbjct: 241 VFGDTSK 247

[Close]
BLAST of Carg17978 vs. NCBI nr
Match: XP_008450441.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Cucumis melo] >XP_008450442.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Cucumis melo])

HSP 1 Score: 486.1 bits (1250), Expect = 7.0e-134
Identity = 229/247 (92.71%), Postives = 234/247 (94.74%), Query Frame = 0 

Query: 1   MSWNNT-HTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNF 60
           MSWNNT  TEVHHVNT YPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQE VYPPLNSNF
Sbjct: 1   MSWNNTPQTEVHHVNTNYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQENVYPPLNSNF 60

Query: 61  YKFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTA 120
           YKFGFSDFGSP+YYNPPQAYR+HD EPIIYEHRRLENSATQP++QSTVN E EE  NT A
Sbjct: 61  YKFGFSDFGSPSYYNPPQAYRMHDHEPIIYEHRRLENSATQPNLQSTVNPEFEEITNTIA 120

Query: 121 FDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180
           FDNHVECPR  HNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS
Sbjct: 121 FDNHVECPRRHHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180

Query: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240
           KYKY FFSRKKSRG+RCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE
Sbjct: 181 KYKYGFFSRKKSRGDRCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240

Query: 241 VFGDTSK 247
           VFGDTSK
Sbjct: 241 VFGDTSK 247

[Close]
BLAST of Carg17978 vs. TAIR10
Match: AT3G63530.1 (RING/U-box superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-54
Identity = 108/251 (43.03%), Postives = 158/251 (62.95%), Query Frame = 0 

Query: 4   NNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFYKFG 63
           N    + H+  T +PY   GS+++++ G     +N+  +   H Q+ +Y  +N+N YKFG
Sbjct: 5   NRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFG 64

Query: 64  FSDFGSPTYYNPPQAYRVHDQEPII------YEHRRLENSATQPDVQSTVNLELEEFANT 123
           FS   + ++Y    +Y ++D    +      +++  + N A  P  ++TV   + +  +T
Sbjct: 65  FSGSDNASFYG---SYDMNDHLSRMSIGRTNWDYHPMVNVADDP--ENTVARSV-QIGDT 124

Query: 124 TAFDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLP 183
                  EC    H+    QV WQD++DPD MTYEEL+ELGE VGT+SRGLSQELI  LP
Sbjct: 125 DEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLP 184

Query: 184 ISKYKY-SFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPIC 243
             KYK+ S FSRK++ GERCVICQ++YK G+R++ LPCKH+YH+ C +KWLSINK CP+C
Sbjct: 185 TKKYKFGSIFSRKRA-GERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 244

Query: 244 YTEVFGDTSKH 248
            +EVFG+ S H
Sbjct: 245 NSEVFGEPSIH 248

[Close]
BLAST of Carg17978 vs. TAIR10
Match: AT3G19910.1 (RING/U-box superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 9.1e-27
Identity = 56/113 (49.56%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 133 SHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSR 192
           SH  Q  W D +DPD ++YEELL LG+ VGT+SRGLS + IA LP  +YK      +   
Sbjct: 228 SHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEG--DNQNGT 287

Query: 193 GERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVFGDTS 246
            E CVIC+++Y+  +  I LPCKH YH+ C   WL INK CP+C  EV   TS
Sbjct: 288 NESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]
BLAST of Carg17978 vs. TAIR10
Match: AT5G52140.1 (RING/U-box superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 131 HNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYK------YS 190
           HN  D      +N DP+NMTYEEL ELG++VG   +GLSQE I+ L   KY       Y 
Sbjct: 166 HNPTD-----DENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYC 225

Query: 191 FFSRKK--SRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVF 242
              +KK  +   +C IC MEY +GD+  TLPCKHIYH  C ++WL  NK C IC  EV+
Sbjct: 226 LHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279

[Close]
BLAST of Carg17978 vs. TAIR10
Match: AT3G47180.1 (RING/U-box superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0 

Query: 144 VDPDNMTYEELLELGETVGTQSRGLSQ-ELIALLPISKYKYSFFSRKKSRGERCVICQME 203
           +DPD ++YEEL+ LG+ +G ++RGL+  E+   L  S Y    FS  K+  +RCV+CQME
Sbjct: 112 IDPDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTY---VFSHNKNEIDRCVVCQME 171

Query: 204 YKRGDRRITL-PCKHIYHAGCGTKWLSINKACPICYTE 240
           ++  +  + L PC H YH+ C TKWL   K CPIC +E
Sbjct: 172 FEERESLVVLRPCDHPYHSECITKWLETKKICPICCSE 206

[Close]
BLAST of Carg17978 vs. TAIR10
Match: AT4G34040.1 (RING/U-box superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.5e-16
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 144 VDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSRG-ERCVICQME 203
           +D DNM+YEELL LGE +G  S GLS+E+I L  + ++K++  +    +  E C +CQ E
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKVMKQHKHTSSAAGSHQDMEPCCVCQEE 626

Query: 204 YKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYT 239
           Y  GD   TL C H +H  C  +WL +   CPIC T
Sbjct: 627 YAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKT 661

[Close]
BLAST of Carg17978 vs. Swiss-Prot
Match: sp|Q8L649|BB_ARATH (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-53
Identity = 108/251 (43.03%), Postives = 158/251 (62.95%), Query Frame = 0 

Query: 4   NNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFYKFG 63
           N    + H+  T +PY   GS+++++ G     +N+  +   H Q+ +Y  +N+N YKFG
Sbjct: 5   NRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKFG 64

Query: 64  FSDFGSPTYYNPPQAYRVHDQEPII------YEHRRLENSATQPDVQSTVNLELEEFANT 123
           FS   + ++Y    +Y ++D    +      +++  + N A  P  ++TV   + +  +T
Sbjct: 65  FSGSDNASFYG---SYDMNDHLSRMSIGRTNWDYHPMVNVADDP--ENTVARSV-QIGDT 124

Query: 124 TAFDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLP 183
                  EC    H+    QV WQD++DPD MTYEEL+ELGE VGT+SRGLSQELI  LP
Sbjct: 125 DEHSEAEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLP 184

Query: 184 ISKYKY-SFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPIC 243
             KYK+ S FSRK++ GERCVICQ++YK G+R++ LPCKH+YH+ C +KWLSINK CP+C
Sbjct: 185 TKKYKFGSIFSRKRA-GERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVC 244

Query: 244 YTEVFGDTSKH 248
            +EVFG+ S H
Sbjct: 245 NSEVFGEPSIH 248

[Close]
BLAST of Carg17978 vs. Swiss-Prot
Match: sp|Q9LT17|BBR_ARATH (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 56/113 (49.56%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 133 SHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSR 192
           SH  Q  W D +DPD ++YEELL LG+ VGT+SRGLS + IA LP  +YK      +   
Sbjct: 228 SHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEG--DNQNGT 287

Query: 193 GERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVFGDTS 246
            E CVIC+++Y+  +  I LPCKH YH+ C   WL INK CP+C  EV   TS
Sbjct: 288 NESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTS 337

[Close]
BLAST of Carg17978 vs. Swiss-Prot
Match: sp|Q9ZQF9|MBR1_ARATH (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.0e-15
Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 0 

Query: 144 VDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKK----SRGERCVIC 203
           +D DNM+YEELL LGE +G  S GLS+E+I L  + ++K++  S          E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 204 QMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240
           Q EY  GD   TL C H +H  C  +W+ I   CPIC TE
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699

[Close]
BLAST of Carg17978 vs. Swiss-Prot
Match: sp|O49500|MBR2_ARATH (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.5e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 144 VDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKSRG-ERCVICQME 203
           +D DNM+YEELL LGE +G  S GLS+E+I L  + ++K++  +    +  E C +CQ E
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKVMKQHKHTSSAAGSHQDMEPCCVCQEE 626

Query: 204 YKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYT 239
           Y  GD   TL C H +H  C  +WL +   CPIC T
Sbjct: 627 YAEGDDLGTLGCGHEFHTACVKQWLMLKNLCPICKT 661

[Close]
BLAST of Carg17978 vs. Swiss-Prot
Match: sp|Q7XTV7|HIP1_ORYSJ (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0 

Query: 144 VDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFFSRKKS-RGERCVICQME 203
           +D DNM+YEELL L E +G  S GLS+E +  L + + K+S +  + S   E C ICQ E
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKL-LKQRKFSSWRLEASVEEEPCCICQEE 627

Query: 204 YKRGDRRITLPCKHIYHAGCGTKWLSINKACPIC 237
           Y  GD   TL C H +H GC  +WL +   CPIC
Sbjct: 628 YVDGDDLGTLDCGHDFHVGCVRQWLVVKNTCPIC 660

[Close]
BLAST of Carg17978 vs. TrEMBL
Match: tr|A0A0A0LX98|A0A0A0LX98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613470 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.7e-134
Identity = 230/247 (93.12%), Postives = 235/247 (95.14%), Query Frame = 0 

Query: 1   MSWNNT-HTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNF 60
           MSWN+T  TEVHHVNT YPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQE VYPPLNSNF
Sbjct: 1   MSWNSTPQTEVHHVNTNYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQENVYPPLNSNF 60

Query: 61  YKFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTA 120
           YKFGFSDFGSP+YYNPPQAYR+HD EPIIYEHRRLENSATQP++QSTVN E EE  NT A
Sbjct: 61  YKFGFSDFGSPSYYNPPQAYRMHDHEPIIYEHRRLENSATQPNLQSTVNPEFEEITNTIA 120

Query: 121 FDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180
           FDNHVECPR  HNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS
Sbjct: 121 FDNHVECPRRHHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180

Query: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240
           KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE
Sbjct: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240

Query: 241 VFGDTSK 247
           VFGDTSK
Sbjct: 241 VFGDTSK 247

[Close]
BLAST of Carg17978 vs. TrEMBL
Match: tr|A0A1S3BQ88|A0A1S3BQ88_CUCME (E3 ubiquitin ligase BIG BROTHER-like OS=Cucumis melo OX=3656 GN=LOC103492041 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 4.6e-134
Identity = 229/247 (92.71%), Postives = 234/247 (94.74%), Query Frame = 0 

Query: 1   MSWNNT-HTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNF 60
           MSWNNT  TEVHHVNT YPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQE VYPPLNSNF
Sbjct: 1   MSWNNTPQTEVHHVNTNYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQENVYPPLNSNF 60

Query: 61  YKFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRLENSATQPDVQSTVNLELEEFANTTA 120
           YKFGFSDFGSP+YYNPPQAYR+HD EPIIYEHRRLENSATQP++QSTVN E EE  NT A
Sbjct: 61  YKFGFSDFGSPSYYNPPQAYRMHDHEPIIYEHRRLENSATQPNLQSTVNPEFEEITNTIA 120

Query: 121 FDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180
           FDNHVECPR  HNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS
Sbjct: 121 FDNHVECPRRHHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPIS 180

Query: 181 KYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240
           KYKY FFSRKKSRG+RCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE
Sbjct: 181 KYKYGFFSRKKSRGDRCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTE 240

Query: 241 VFGDTSK 247
           VFGDTSK
Sbjct: 241 VFGDTSK 247

[Close]
BLAST of Carg17978 vs. TrEMBL
Match: tr|A0A2P4H9H8|A0A2P4H9H8_QUESU (E3 ubiquitin ligase big brother OS=Quercus suber OX=58331 GN=CFP56_51550 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 5.4e-98
Identity = 175/242 (72.31%), Postives = 200/242 (82.64%), Query Frame = 0 

Query: 9   EVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFYKFGFSDFG 68
           EVH+VNT YPY+TAGSF+EYFEGLTY+HVNFIFSGASH+QE+VYP +N++FYKFGFS+ G
Sbjct: 2   EVHYVNTSYPYSTAGSFMEYFEGLTYDHVNFIFSGASHAQESVYPQMNTSFYKFGFSEPG 61

Query: 69  SPTYYNPPQAYRVHDQEPIIYEHRR-LENSATQPDVQST---VNLELEEFANTTAFDNHV 128
           + +YY+   AY V+D EP I E+RR  ENS+T  + Q+       E     +TT  DN +
Sbjct: 62  NTSYYDHGHAYAVNDHEPRIDEYRRPFENSSTMVNEQAAAAHTEWEGNAATSTTTHDNPI 121

Query: 129 ECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYS 188
           ECPR  HNSHD+QV+WQDN+DPDNMTYEELLELGE VGTQ+RGLSQE I+LLPISKYK  
Sbjct: 122 ECPRRHHNSHDYQVIWQDNIDPDNMTYEELLELGEAVGTQNRGLSQEQISLLPISKYKCG 181

Query: 189 FFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVFGDT 247
           FFSRKKSR ERCVICQMEYKRGDRRITLPCKH YHA CGTKWLSINKACPICYTEVF D 
Sbjct: 182 FFSRKKSRDERCVICQMEYKRGDRRITLPCKHAYHASCGTKWLSINKACPICYTEVFADA 241

[Close]
BLAST of Carg17978 vs. TrEMBL
Match: tr|A0A1R3K9H5|A0A1R3K9H5_COCAP (Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_02277 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.6e-97
Identity = 170/240 (70.83%), Postives = 207/240 (86.25%), Query Frame = 0 

Query: 9   EVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFYKFGFSDFG 68
           EV ++N+ YPYN+AGSF+EYFEGLTY+HVNFIF GASH QETVYP + +NFYKFG SD G
Sbjct: 2   EVQYINSSYPYNSAGSFMEYFEGLTYQHVNFIFDGASHVQETVYPSMTTNFYKFGLSDSG 61

Query: 69  SPTYYNPPQAYRVHDQEPIIYEHRRL-ENSATQPDVQ-STVNLELEEFANTTAFDNHVEC 128
           + +YY+   +Y V++ E  + E+RR  ENS++  + Q +T+N+E E  ANTT+ +N V+C
Sbjct: 62  NISYYDHGHSYEVNNHELCVDEYRRASENSSSMSNEQAATMNMEWEGNANTTSPENPVDC 121

Query: 129 PRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPISKYKYSFF 188
           PR +HN+HD+QV+WQD+VDPDNMTYEELLELGETVGTQSRGLSQ+LI++LP+SKYK S F
Sbjct: 122 PRRQHNAHDYQVIWQDSVDPDNMTYEELLELGETVGTQSRGLSQDLISMLPVSKYKCSIF 181

Query: 189 SRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYTEVFGDTSK 247
           SRKKSR ERCVICQMEYKRG+RRITLPCKH+YHAGCGT+WLSINKACPICYTEVFGD SK
Sbjct: 182 SRKKSRNERCVICQMEYKRGERRITLPCKHVYHAGCGTRWLSINKACPICYTEVFGDASK 241

[Close]
BLAST of Carg17978 vs. TrEMBL
Match: tr|A0A061GTY3|A0A061GTY3_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_040623 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 6.6e-96
Identity = 172/248 (69.35%), Postives = 206/248 (83.06%), Query Frame = 0 

Query: 1   MSWNNTHTEVHHVNTPYPYNTAGSFLEYFEGLTYEHVNFIFSGASHSQETVYPPLNSNFY 60
           MSW N H EV ++N+ YPYN+AGSF+EYFEGLTY+HVNFIF GASH QE+VYP + S+FY
Sbjct: 1   MSW-NPHMEVQYINSSYPYNSAGSFMEYFEGLTYQHVNFIFDGASHVQESVYPSMTSSFY 60

Query: 61  KFGFSDFGSPTYYNPPQAYRVHDQEPIIYEHRRL-ENSATQPDVQ-STVNLELEEFANTT 120
           KFG SD G+ +YY+    Y V++ E  + E+RR  ENS++  + Q + +N+E E   NT 
Sbjct: 61  KFGLSDSGNISYYDHGHNYEVNNHELCVDEYRRASENSSSMSNEQTAAMNMEWEGNVNTM 120

Query: 121 AFDNHVECPRGRHNSHDFQVVWQDNVDPDNMTYEELLELGETVGTQSRGLSQELIALLPI 180
           + +N V+CPR +HN  D+QVVWQD+VDPDNMTYEELLELGETVGTQSRGLSQELI+LLP+
Sbjct: 121 SRENPVDCPRRQHNGLDYQVVWQDSVDPDNMTYEELLELGETVGTQSRGLSQELISLLPV 180

Query: 181 SKYKYSFFSRKKSRGERCVICQMEYKRGDRRITLPCKHIYHAGCGTKWLSINKACPICYT 240
           SKYK S FSRKKSR ERCVICQMEYKRG+RRITLPCKH+YHAGCG++WLSINKACPICYT
Sbjct: 181 SKYKCSLFSRKKSRNERCVICQMEYKRGERRITLPCKHVYHAGCGSRWLSINKACPICYT 240

Query: 241 EVFGDTSK 247
           EVFGD SK
Sbjct: 241 EVFGDASK 247

The following BLAST results are available for this feature:
BLAST of Carg17978 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927874.11.6e-146100.00E3 ubiquitin ligase BIG BROTHER-like [Cucurbita moschata] >XP_022927882.1 E3 ubi... [more]
XP_023531796.14.7e-14699.60E3 ubiquitin ligase BIG BROTHER-like [Cucurbita pepo subsp. pepo][more]
XP_022968110.15.7e-14498.38E3 ubiquitin ligase BIG BROTHER-like [Cucurbita maxima][more]
XP_011660125.14.1e-13493.12PREDICTED: E3 ubiquitin ligase BIG BROTHER [Cucumis sativus] >XP_011660126.1 PRE... [more]
XP_008450441.17.0e-13492.71PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Cucumis melo] >XP_008450442.1 P... [more]
BLAST of Carg17978 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63530.11.0e-5443.03RING/U-box superfamily protein[more]
AT3G19910.19.1e-2749.56RING/U-box superfamily protein[more]
AT5G52140.12.1e-2347.90RING/U-box superfamily protein[more]
AT3G47180.11.8e-1944.90RING/U-box superfamily protein[more]
AT4G34040.12.5e-1643.75RING/U-box superfamily protein[more]
BLAST of Carg17978 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8L649|BB_ARATH1.9e-5343.03E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE... [more]
sp|Q9LT17|BBR_ARATH1.6e-2549.56E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P... [more]
sp|Q9ZQF9|MBR1_ARATH2.0e-1545.00E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV... [more]
sp|O49500|MBR2_ARATH4.5e-1543.75E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV... [more]
sp|Q7XTV7|HIP1_ORYSJ1.0e-1445.74Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399... [more]
BLAST of Carg17978 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LX98|A0A0A0LX98_CUCSA2.7e-13493.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613470 PE=4 SV=1[more]
tr|A0A1S3BQ88|A0A1S3BQ88_CUCME4.6e-13492.71E3 ubiquitin ligase BIG BROTHER-like OS=Cucumis melo OX=3656 GN=LOC103492041 PE=... [more]
tr|A0A2P4H9H8|A0A2P4H9H8_QUESU5.4e-9872.31E3 ubiquitin ligase big brother OS=Quercus suber OX=58331 GN=CFP56_51550 PE=4 SV... [more]
tr|A0A1R3K9H5|A0A1R3K9H5_COCAP1.6e-9770.83Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_02277 PE=4 S... [more]
tr|A0A061GTY3|A0A061GTY3_THECC6.6e-9669.35RING/U-box superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_04062... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17978-RACarg17978-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 196..236
e-value: 2.8E-5
score: 33.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 195..236
e-value: 1.4E-11
score: 44.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 196..236
score: 10.852
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 168..244
e-value: 2.8E-17
score: 63.7
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..245
NoneNo IPR availablePANTHERPTHR14155:SF170SUBFAMILY NOT NAMEDcoord: 1..245
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 195..241

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17978Csa1G613470Cucumber (Chinese Long) v2carcuB0192
Carg17978ClCG03G013370Watermelon (Charleston Gray)carwcgB0165
Carg17978CSPI01G30250Wild cucumber (PI 183967)carcpiB0199
Carg17978Cucsa.143280Cucumber (Gy14) v1carcgyB0212
Carg17978CmaCh11G008380Cucurbita maxima (Rimu)carcmaB0231
Carg17978CmaCh20G000770Cucurbita maxima (Rimu)carcmaB0232
Carg17978CmaCh10G009400Cucurbita maxima (Rimu)carcmaB0230
Carg17978CmoCh02G012810Cucurbita moschata (Rifu)carcmoB0242
Carg17978CmoCh10G009850Cucurbita moschata (Rifu)carcmoB0240
Carg17978CmoCh11G008490Cucurbita moschata (Rifu)carcmoB0241
Carg17978Lsi06G005150Bottle gourd (USVL1VR-Ls)carlsiB155
Carg17978Cp4.1LG05g05080Cucurbita pepo (Zucchini)carcpeB0249
Carg17978Cp4.1LG04g11960Cucurbita pepo (Zucchini)carcpeB0248
Carg17978Cp4.1LG18g01600Cucurbita pepo (Zucchini)carcpeB0247
Carg17978CsGy1G029600Cucumber (Gy14) v2carcgybB0186
Carg17978MELO3C029471.2Melon (DHL92) v3.6.1carmedB0182
Carg17978CsaV3_1G042670Cucumber (Chinese Long) v3carcucB0199
Carg17978Cla97C03G063580Watermelon (97103) v2carwmbB0178
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg17978Carg16949Silver-seed gourdcarcarB208
Carg17978Carg02717Silver-seed gourdcarcarB210
The following block(s) are covering this gene:
GeneOrganismBlock
Carg17978Silver-seed gourdcarcarB207
Carg17978Silver-seed gourdcarcarB209
Carg17978Cucurbita maxima (Rimu)carcmaB0233
Carg17978Cucurbita pepo (Zucchini)carcpeB0246
Carg17978Melon (DHL92) v3.5.1carmeB0178
Carg17978Watermelon (97103) v1carwmB0163
Carg17978Wax gourdcarwgoB0221
Carg17978Wax gourdcarwgoB0223