Carg16528 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16528
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MYB transcription factor
Location	Cucurbita_argyrosperma_scaffold_089 : 163761 .. 164670 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGTAACTTTTTGTTCGTTCTTGAAAACGTCATTCTGGGTCTTGATACCCAAAACTGATCTTTTTATGGCGTTTTTACTTAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGGTACCTTCTGAGTTCAATCTCTCGTGTCAGTAAAGATGTTCGTTTGTGTTCCTTTGAACCAATTCGACTTACTAACTATGAAACGTTTGGCTCAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

mRNA sequence

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

Coding sequence (CDS)

ATGTTTAACTTGAGAGCAATGGTAGGCCATTGGAGTTGGGGTTTGGTGGAAGATGAAGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAAGACAGGTTGCTTATGGAATATGTCAGGATATATGGTGAAGGAAGATGGAATTCCGTGGCTCGGCTTACAGGATTGAAGAGAAATGGAAAGAGTTGCAGACTGAGATGGGTGAACTATCTAAGGCCGGACTTGAAGAGAGGACAAATAACCCCACATGAAGAGAGCGTAATTCTCGAGCTTCATGCTAGATGGGGCAACAGATGGTCAATGATTGCTCGGAGCTTACCAGGACGAACGGATAACGAAATAAAGAATTACTGGAGGACCCATTTCAAGAAAAAGGAAAAGGACAGTTCTGATGCGAATGGGAAAGCAAAAGCTCGCCTTCTCAGAAGGCAGCAATTTCATCAGCAACAACTGCAGCAGCAGCAGCAGCAGCAATACAACCCAATGGACATGAACAAAATCATGGCTCTACTAGAAGAAGAACACGACAAAAACAACATATCAGAAGCTTTGTCTTCCTCTGCTTCAGAGACAGAGAAGAGACAAAACATCACAAATTTCCACTCACAAACAGCTAACAATGAACAGAGTCTACTCTCTGAGCTCAATACCAATGGCTTTGTTCTACCTGAGATATTGAATGAAGGGCTCGAAGTGGGATGGGCTATGGAGCTTGGTGGGTGTCCATGGCAATGGTAG

Protein sequence

MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSDANGKAKARLLRRQQFHQQQLQQQQQQQYNPMDMNKIMALLEEEHDKNNISEALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGCPWQW

Homology

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BLAST of Carg16528 vs. NCBI nr
Match: XP_022980389.1 (transcription factor WER [Cucurbita maxima])

HSP 1 Score: 436.8 bits (1122), Expect = 4.8e-119
Identity = 240/244 (98.36%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSD   XXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS
Sbjct: 121 FKKKEKDSSD-ANXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 243

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BLAST of Carg16528 vs. NCBI nr
Match: XP_023528479.1 (transcription factor WER [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425.2 bits (1092), Expect = 1.5e-115
Identity = 235/244 (96.31%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSD    XXXXXXXXXXXXXXXXXXXXXXXX PMDMNKIMALL EEHDKNNIS
Sbjct: 121 FKKKEKDSSD-ANGXXXXXXXXXXXXXXXXXXXXXXXXNPMDMNKIMALL-EEHDKNNIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPE+LNEGLEVGWAMELGG 
Sbjct: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEMLNEGLEVGWAMELGGY 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 242

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BLAST of Carg16528 vs. NCBI nr
Match: XP_022924745.1 (transcription factor WER [Cucurbita moschata])

HSP 1 Score: 397.5 bits (1020), Expect = 3.2e-107
Identity = 222/244 (90.98%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK
Sbjct: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS 180
           FKKKEKDSSD   XXXXXXXXXXXXXXXXXXXXXXXXXX     KIMALL        IS
Sbjct: 121 FKKKEKDSSDANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIMALLXXXXXXXXIS 180

Query: 181 EALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240
           EALS    ETEKRQN TNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC
Sbjct: 181 EALSXXXXETEKRQNTTNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAMELGGC 240

Query: 241 PWQW 245
           PWQW
Sbjct: 241 PWQW 244

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BLAST of Carg16528 vs. NCBI nr
Match: XP_008438441.1 (PREDICTED: transcription factor MYB24-like [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 6.6e-84
Identity = 187/249 (75.10%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 2   FNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKS 61
           FNLR MVGHWSWGL+EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARL GLKRNGKS
Sbjct: 46  FNLRTMVGHWSWGLMEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLAGLKRNGKS 105

Query: 62  CRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHF 121
           CRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHF
Sbjct: 106 CRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHF 165

Query: 122 KKKEKDSSD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHD 181
           KKK KDSSD         XXXXXXXXXXXXXXXXXXXXXXXXXX                
Sbjct: 166 KKKVKDSSDANGKAKARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 225

Query: 182 KNNISEALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAM 241
                                 NF++QT +NEQSL+SELN NGFVLPE+LNEGL+VGWAM
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXNFYTQTTDNEQSLISELNNNGFVLPEMLNEGLDVGWAM 285

Query: 242 ELGGCPWQW 245
           ELGG PWQW
Sbjct: 286 ELGGYPWQW 294

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BLAST of Carg16528 vs. NCBI nr
Match: XP_022157976.1 (transcription factor MYB57-like isoform X1 [Momordica charantia])

HSP 1 Score: 293.9 bits (751), Expect = 5.1e-76
Identity = 166/240 (69.17%), Postives = 191/240 (79.58%), Query Frame = 0


Query: 1   MFNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGK 60
           MFNL  MVGHW WG++EDEVWRKGPWTAEED+LL EYVRIYGEGRWNSVARL GLKRNGK
Sbjct: 1   MFNLGTMVGHWGWGVMEDEVWRKGPWTAEEDKLLTEYVRIYGEGRWNSVARLAGLKRNGK 60

Query: 61  SCRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTH 120
           SCRLRWVNYLRPDLKRGQITPHEE++IL+LHARWGNRWS IARSLPGRTDNEIKNYWRTH
Sbjct: 61  SCRLRWVNYLRPDLKRGQITPHEETIILQLHARWGNRWSTIARSLPGRTDNEIKNYWRTH 120

Query: 121 FKKKEKDSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDKNNIS 180
           FKKK KD  D             XXXXXXXXXXXXXXX  ++ +K  A+L EEHD NN  
Sbjct: 121 FKKKAKDPCD--VNGKAKSRLLRXXXXXXXXXXXXXXXNALETSKFKAVL-EEHD-NNKE 180

Query: 181 EALSSSASETE-KRQNITNFHSQTANN-EQSLLSELNTNGFVLPEILNEGL--EVGWAME 237
                SASE E  +  +TNFHSQ ++  E+SL+SELN++GF+LPE+L++G   +  W++E
Sbjct: 181 AXXXXSASEAEIMKPELTNFHSQASDQYEESLVSELNSHGFLLPEVLSDGFLWDGLWSLE 236

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BLAST of Carg16528 vs. TAIR10
Match: AT3G24310.1 (myb domain protein 305)

HSP 1 Score: 224.6 bits (571), Expect = 6.8e-59
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 13  WGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRP 72
           WG+VE E WRKGPWTAEEDRLL++YV+++GEGRWNSVARL GLKRNGKSCRLRWVNYLRP
Sbjct: 11  WGMVE-EGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRP 70

Query: 73  DLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSD 131
           DLKRGQITPHEE++ILELHA+WGNRWS IARSLPGRTDNEIKNYWRTHFKKK K  ++
Sbjct: 71  DLKRGQITPHEETIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPTN 127

[Close]

BLAST of Carg16528 vs. TAIR10
Match: AT4G13480.1 (myb domain protein 79)

HSP 1 Score: 224.6 bits (571), Expect = 6.8e-59
Identity = 98/113 (86.73%), Postives = 109/113 (96.46%), Query Frame = 0


Query: 18  DEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRG 77
           +EVWRKGPWTAEEDRLL+EYVR++GEGRWNSV++L GLKRNGKSCRLRWVNYLRPDLKRG
Sbjct: 3   EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 78  QITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSSD 131
           QITPHEES+ILELHA+WGNRWS IARSLPGRTDNEIKNYWRTHFKKK K +++
Sbjct: 63  QITPHEESIILELHAKWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKPTTN 115

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BLAST of Carg16528 vs. TAIR10
Match: AT3G30210.1 (myb domain protein 121)

HSP 1 Score: 187.6 bits (475), Expect = 9.3e-48
Identity = 82/108 (75.93%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 22  RKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITP 81
           RKGPWT EED+LL EYV  +GEGRW++VA+  GL R+GKSCRLRWVNYLRP LKRGQITP
Sbjct: 28  RKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKRGQITP 87

Query: 82  HEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKDSS 130
            EE +ILELH+ WGN+WS IAR LPGRTDNEIKNYWRTH+KK +K SS
Sbjct: 88  QEEGIILELHSLWGNKWSTIARYLPGRTDNEIKNYWRTHYKKNQKSSS 135

[Close]

BLAST of Carg16528 vs. TAIR10
Match: AT3G46130.1 (myb domain protein 48)

HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43
Identity = 72/113 (63.72%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           ++++E  RKGPWT +ED LL+ +V ++G+ RW+ +A+++GL R GKSCRLRWVNYL P L
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113

[Close]

BLAST of Carg16528 vs. TAIR10
Match: AT5G59780.3 (myb domain protein 59)

HSP 1 Score: 171.0 bits (432), Expect = 9.0e-43
Identity = 73/108 (67.59%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           LV++E +RKGPWT +ED LL+ +V ++G+ RW+ VA+++GL R GKSCRLRWVNYL P L
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFK 123
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMR 109

[Close]

BLAST of Carg16528 vs. Swiss-Prot
Match: sp|Q10MB4|MYB2_ORYSJ (Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.0e-43
Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 22  RKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITP 81
           R+GPWT EED LL+ Y+  +GEGRWNS+AR  GLKR GKSCRLRW+NYLRPDL+RG ITP
Sbjct: 21  RRGPWTVEEDLLLVNYIAAHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDLRRGNITP 80

Query: 82  HEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK 127
            E+ +ILELH+RWGNRWS IA+ LPGRTDNEIKNYWRT  +K  K
Sbjct: 81  QEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAK 125

[Close]

BLAST of Carg16528 vs. Swiss-Prot
Match: sp|Q9LX82|MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-42
Identity = 72/113 (63.72%), Postives = 95/113 (84.07%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           ++++E  RKGPWT +ED LL+ +V ++G+ RW+ +A+++GL R GKSCRLRWVNYL P L
Sbjct: 1   MMQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGL 60

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 61  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113

[Close]

BLAST of Carg16528 vs. Swiss-Prot
Match: sp|Q4JL76|MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-42
Identity = 76/112 (67.86%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 16  VEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLK 75
           V +E+ RKGPWT +ED  L+  VR++GE RW+ +A+++GL R GKSCRLRWVNYL P LK
Sbjct: 4   VREEI-RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 63

Query: 76  RGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEKD 128
           RG+++PHEE +ILELHARWGNRWS IAR LPGRTDNEIKNYWRTH +KK ++
Sbjct: 64  RGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQE 114

[Close]

BLAST of Carg16528 vs. Swiss-Prot
Match: sp|P81391|MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-41
Identity = 73/107 (68.22%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 17  EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKR 76
           +D   RKGPWT EED +L+ Y+  +GEG WNS+AR  GLKR GKSCRLRW+NYLRPD++R
Sbjct: 9   QDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRR 68

Query: 77  GQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKK 124
           G ITP E+ +I+ELHA+WGNRWS IA++LPGRTDNEIKNYWRT  +K
Sbjct: 69  GNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQK 115

[Close]

BLAST of Carg16528 vs. Swiss-Prot
Match: sp|Q4JL84|MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 73/108 (67.59%), Postives = 92/108 (85.19%), Query Frame = 0


Query: 15  LVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDL 74
           LV++E +RKGPWT +ED LL+ +V ++G+ RW+ VA+++GL R GKSCRLRWVNYL P L
Sbjct: 3   LVQEE-YRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGL 62

Query: 75  KRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFK 123
           KRG++TP EE ++LELHA+WGNRWS IAR LPGRTDNEIKNYWRTH +
Sbjct: 63  KRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMR 109

[Close]

BLAST of Carg16528 vs. TrEMBL
Match: tr|A0A1S3AW20|A0A1S3AW20_CUCME (transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103483536 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.4e-84
Identity = 187/249 (75.10%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 2   FNLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKS 61
           FNLR MVGHWSWGL+EDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARL GLKRNGKS
Sbjct: 46  FNLRTMVGHWSWGLMEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLAGLKRNGKS 105

Query: 62  CRLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHF 121
           CRLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHF
Sbjct: 106 CRLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHF 165

Query: 122 KKKEKDSSD------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHD 181
           KKK KDSSD         XXXXXXXXXXXXXXXXXXXXXXXXXX                
Sbjct: 166 KKKVKDSSDANGKAKARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 225

Query: 182 KNNISEALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGLEVGWAM 241
                                 NF++QT +NEQSL+SELN NGFVLPE+LNEGL+VGWAM
Sbjct: 226 XXXXXXXXXXXXXXXXXXXXXXNFYTQTTDNEQSLISELNNNGFVLPEMLNEGLDVGWAM 285

Query: 242 ELGGCPWQW 245
           ELGG PWQW
Sbjct: 286 ELGGYPWQW 294

[Close]

BLAST of Carg16528 vs. TrEMBL
Match: tr|A0A2I4GSD2|A0A2I4GSD2_9ROSI (transcription factor MYB24-like OS=Juglans regia OX=51240 GN=LOC109010427 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.2e-61
Identity = 153/236 (64.83%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 3   NLRAMVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSC 62
           N   M GH  WGL+ +E WRKGPWT++EDRLL+EYVR++GEGRWNSVARL GLKRNGKSC
Sbjct: 2   NFGVMAGHLGWGLIGEEGWRKGPWTSDEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSC 61

Query: 63  RLRWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFK 122
           RLRWVNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHFK
Sbjct: 62  RLRWVNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFK 121

Query: 123 KKEKDSSD---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEE 182
           KK K  SD         XXXXXXXXXXXXXXXXXXXXXXXXXX     DM +I+ALL+E 
Sbjct: 122 KKAKVPSDASEKAKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXQLNQADMKRILALLDEN 181

Query: 183 HDKNNISEALSSSASETEKRQNITNFHSQTANNEQSLLSELNTNGFVLPEILNEGL 230
             K         + S  + RQ ++  +  T   +    S LN+N  ++PE  NE +
Sbjct: 182 DHK---------ATSVPQARQEMSTMYPNTTEEQSYFYSLLNSN-VLVPEASNEDI 227

[Close]

BLAST of Carg16528 vs. TrEMBL
Match: tr|A0A0D2RRS7|A0A0D2RRS7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G073500 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 130/175 (74.29%), Postives = 142/175 (81.14%), Query Frame = 0


Query: 6   AMVG-HWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRL 65
           AM+G  + WG++E+E WRKGPWTAEEDRLL EYVR++GEGRWNSVARL GLKRNGKSCRL
Sbjct: 4   AMMGEQFGWGVIEEEAWRKGPWTAEEDRLLTEYVRLHGEGRWNSVARLAGLKRNGKSCRL 63

Query: 66  RWVNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKK 125
           RWVNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHFKKK
Sbjct: 64  RWVNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKK 123

Query: 126 EK---DSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMDMNKIMALLEEEHDK 177
            K   D+SD             XXXXXXXXXXXXX     DM ++M+LLEE   K
Sbjct: 124 AKLSPDNSDQAKARTLKRQHFQXXXXXXXXXXXXXQLNESDMKRMMSLLEETEPK 178

[Close]

BLAST of Carg16528 vs. TrEMBL
Match: tr|A0A0K0VK45|A0A0K0VK45_MORAL (Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis OX=170012 GN=MYB3 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60
Identity = 107/125 (85.60%), Postives = 117/125 (93.60%), Query Frame = 0


Query: 7   MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW 66
           M GH  WG++E+E WRKGPWTA+EDRLL+EYVR++GEGRWNSVARL GLKRNGKSCRLRW
Sbjct: 1   MAGHMGWGIIEEEGWRKGPWTADEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 67  VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKE- 126
           VNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHFKKK+ 
Sbjct: 61  VNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKQA 120

Query: 127 KDSSD 131
           K +SD
Sbjct: 121 KAASD 125

[Close]

BLAST of Carg16528 vs. TrEMBL
Match: tr|A0A2N9FEB4|A0A2N9FEB4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13222 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.4e-60
Identity = 107/124 (86.29%), Postives = 114/124 (91.94%), Query Frame = 0


Query: 7   MVGHWSWGLVEDEVWRKGPWTAEEDRLLMEYVRIYGEGRWNSVARLTGLKRNGKSCRLRW 66
           M GH  WG++E+E WRKGPWTAEEDRLL+EYVR++GEGRWNSVARL GLKRNGKSCRLRW
Sbjct: 1   MAGHLGWGIIEEEDWRKGPWTAEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 67  VNYLRPDLKRGQITPHEESVILELHARWGNRWSMIARSLPGRTDNEIKNYWRTHFKKKEK 126
           VNYLRPDLKRGQITPHEES+ILELHARWGNRWS IARSLPGRTDNEIKNYWRTHFKKK  
Sbjct: 61  VNYLRPDLKRGQITPHEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAI 120

Query: 127 DSSD 131
             SD
Sbjct: 121 VPSD 124

The following BLAST results are available for this feature:

BLAST of Carg16528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980389.1	4.8e-119	98.36	transcription factor WER [Cucurbita maxima]	[more]
XP_023528479.1	1.5e-115	96.31	transcription factor WER [Cucurbita pepo subsp. pepo]	[more]
XP_022924745.1	3.2e-107	90.98	transcription factor WER [Cucurbita moschata]	[more]
XP_008438441.1	6.6e-84	75.10	PREDICTED: transcription factor MYB24-like [Cucumis melo]	[more]
XP_022157976.1	5.1e-76	69.17	transcription factor MYB57-like isoform X1 [Momordica charantia]	[more]

BLAST of Carg16528 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24310.1	6.8e-59	84.75	myb domain protein 305	[more]
AT4G13480.1	6.8e-59	86.73	myb domain protein 79	[more]
AT3G30210.1	9.3e-48	75.93	myb domain protein 121	[more]
AT3G46130.1	1.4e-43	63.72	myb domain protein 48	[more]
AT5G59780.3	9.0e-43	67.59	myb domain protein 59	[more]

BLAST of Carg16528 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q10MB4\|MYB2_ORYSJ	5.0e-43	72.38	Transcription factor MYB2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB2 PE=2 ...	[more]
sp\|Q9LX82\|MYB48_ARATH	2.5e-42	63.72	Transcription factor MYB48 OS=Arabidopsis thaliana OX=3702 GN=MYB48 PE=2 SV=1	[more]
sp\|Q4JL76\|MYBA2_ORYSJ	3.3e-42	67.86	Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBAS2 PE...	[more]
sp\|P81391\|MYB05_ANTMA	1.2e-41	68.22	Myb-related protein 305 OS=Antirrhinum majus OX=4151 GN=MYB305 PE=2 SV=1	[more]
sp\|Q4JL84\|MYB59_ARATH	1.6e-41	67.59	Transcription factor MYB59 OS=Arabidopsis thaliana OX=3702 GN=MYB59 PE=2 SV=2	[more]

BLAST of Carg16528 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AW20\|A0A1S3AW20_CUCME	4.4e-84	75.10	transcription factor MYB24-like OS=Cucumis melo OX=3656 GN=LOC103483536 PE=4 SV=...	[more]
tr\|A0A2I4GSD2\|A0A2I4GSD2_9ROSI	5.2e-61	64.83	transcription factor MYB24-like OS=Juglans regia OX=51240 GN=LOC109010427 PE=4 S...	[more]
tr\|A0A0D2RRS7\|A0A0D2RRS7_GOSRA	3.4e-60	74.29	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G073500 PE=4 ...	[more]
tr\|A0A0K0VK45\|A0A0K0VK45_MORAL	3.4e-60	85.60	Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis OX=170012...	[more]
tr\|A0A2N9FEB4\|A0A2N9FEB4_FAGSY	4.4e-60	86.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13222 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg16528-RA	Carg16528-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 21..76 e-value: 1.2E-19 score: 71.9
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 80..167 e-value: 1.2E-17 score: 65.7
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 13..192
None	No IPR available	PANTHER	PTHR10641:SF574	MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 13..192
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 75..123 e-value: 2.6E-13 score: 60.2 coord: 22..72 e-value: 9.2E-16 score: 68.4
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 76..120 e-value: 3.6E-12 score: 46.2 coord: 23..70 e-value: 2.6E-16 score: 59.4
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 25..70 e-value: 2.87141E-10 score: 52.963
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 80..121 e-value: 3.05303E-8 score: 47.5702
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 18..74 score: 24.911
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 75..125 score: 18.882
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 22..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg16528	Cla021474	Watermelon (97103) v1	carwmB0223
Carg16528	Cla007626	Watermelon (97103) v1	carwmB0224
Carg16528	Csa2G169770	Cucumber (Chinese Long) v2	carcuB0261
Carg16528	Csa3G134000	Cucumber (Chinese Long) v2	carcuB0262
Carg16528	MELO3C006366	Melon (DHL92) v3.5.1	carmeB0240
Carg16528	MELO3C023051	Melon (DHL92) v3.5.1	carmeB0238
Carg16528	ClCG06G007340	Watermelon (Charleston Gray)	carwcgB0227
Carg16528	ClCG05G003890	Watermelon (Charleston Gray)	carwcgB0226
Carg16528	CSPI03G11470	Wild cucumber (PI 183967)	carcpiB0266
Carg16528	CSPI02G09910	Wild cucumber (PI 183967)	carcpiB0265
Carg16528	Cucsa.383230	Cucumber (Gy14) v1	carcgyB0277
Carg16528	Cucsa.255900	Cucumber (Gy14) v1	carcgyB0276
Carg16528	CmaCh08G010530	Cucurbita maxima (Rimu)	carcmaB0330
Carg16528	CmaCh14G018520	Cucurbita maxima (Rimu)	carcmaB0325
Carg16528	CmoCh08G010240	Cucurbita moschata (Rifu)	carcmoB0333
Carg16528	CmoCh14G018970	Cucurbita moschata (Rifu)	carcmoB0328
Carg16528	Lsi05G017800	Bottle gourd (USVL1VR-Ls)	carlsiB210
Carg16528	Lsi09G011850	Bottle gourd (USVL1VR-Ls)	carlsiB209
Carg16528	Cp4.1LG03g09700	Cucurbita pepo (Zucchini)	carcpeB0334
Carg16528	Cp4.1LG17g02110	Cucurbita pepo (Zucchini)	carcpeB0333
Carg16528	CsGy3G011530	Cucumber (Gy14) v2	carcgybB0251
Carg16528	MELO3C006366.2	Melon (DHL92) v3.6.1	carmedB0248
Carg16528	MELO3C023051.2	Melon (DHL92) v3.6.1	carmedB0246
Carg16528	CsaV3_2G012330	Cucumber (Chinese Long) v3	carcucB0265
Carg16528	CsaV3_3G011570	Cucumber (Chinese Long) v3	carcucB0266
Carg16528	Cla97C05G084530	Watermelon (97103) v2	carwmbB0236
Carg16528	Bhi01G000479	Wax gourd	carwgoB0296

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg16528	Carg10994	Silver-seed gourd	carcarB275

The following block(s) are covering this gene:


Gene	Organism	Block
Carg16528	Silver-seed gourd	carcarB259
Carg16528	Silver-seed gourd	carcarB274
Carg16528	Silver-seed gourd	carcarB273
Carg16528	Cucumber (Gy14) v2	carcgybB0250
Carg16528	Cucumber (Gy14) v2	carcgybB0252
Carg16528	Cucumber (Gy14) v1	carcgyB0275
Carg16528	Cucurbita maxima (Rimu)	carcmaB0326
Carg16528	Cucurbita maxima (Rimu)	carcmaB0327
Carg16528	Cucurbita maxima (Rimu)	carcmaB0328
Carg16528	Cucurbita maxima (Rimu)	carcmaB0329
Carg16528	Cucurbita moschata (Rifu)	carcmoB0329
Carg16528	Cucurbita moschata (Rifu)	carcmoB0330
Carg16528	Cucurbita moschata (Rifu)	carcmoB0331
Carg16528	Cucurbita moschata (Rifu)	carcmoB0332
Carg16528	Cucurbita pepo (Zucchini)	carcpeB0331
Carg16528	Cucurbita pepo (Zucchini)	carcpeB0332
Carg16528	Cucurbita pepo (Zucchini)	carcpeB0335
Carg16528	Cucurbita pepo (Zucchini)	carcpeB0336
Carg16528	Wild cucumber (PI 183967)	carcpiB0267
Carg16528	Cucumber (Chinese Long) v2	carcuB0263
Carg16528	Cucumber (Chinese Long) v3	carcucB0267
Carg16528	Bottle gourd (USVL1VR-Ls)	carlsiB211
Carg16528	Watermelon (Charleston Gray)	carwcgB0228
Carg16528	Watermelon (97103) v1	carwmB0222
Carg16528	Watermelon (97103) v2	carwmbB0237
Carg16528	Watermelon (97103) v2	carwmbB0238
Carg16528	Wax gourd	carwgoB0290
Carg16528	Wax gourd	carwgoB0297