Cp4.1LG17g02110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g02110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMyb family transcription factor family protein
LocationCp4.1LG17 : 1419485 .. 1421381 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGGACGTCTCAAGTGAATCCGAGAAGATAATAGCATATAAAAACGACATACTATCAAAAAGTAGCTCGAAATTGAGGCATGTGGGACGGGTATAGGCTATATCAGAGTACTAAGTTGATAGAAGCTTAGCTGATTGATGAATCATGGCTAAAAGAAAGATCTTAATCATGTGACAAATTATTCTCAAGCTTGGTTGATGTGAAACTATGATAATCTGCACTGAACCATTTCAAATCTGGAAAAATCCTACTGGAGAGAATCTAAATATGATCTATTTACAAGGCAAAAGAACACTATGATAGTTAAAAATATGGAGAGAATCTATGTATAATCTAGATGACTCCAAGCTCATCACTTTATAATATTTTTCCTAAAAGAATGATGGAAATCTAGTTAAAATAATCAAATGGGTCATCTTTCATAGAAGAAGAATAAGATTAGACAGTCCCAAAAAGAAGATGAAGTTTTAAAAAAAGGGAAAAGAGCAATACACAATAAAATATTGATGAGGACATATATGCCATTATATAATATTGTTTCGAAAATGATGATGATCACTATAACTTGAACAGTAGACATGATCAGAAAAACTATGAAACCATGAGTGAGTATATAAATATGCAGCAGATATTAACTAAATATGCCATAGAAATCTGGAAGAGAGACAGAGAGAGACAGAGAGAGGAAAAGTAAGGCTTTGGAAGATGATGATGATGATGAGTGAGCATTTTGGTTGGGGCAAAGTGGAGGAAGAAGGATGGAGGAAAGGGCCTTGGACTGCTGAAGAAGACAGGTTGCTGATTGAGTATGTGAGAGTTCATGGTGAAGGAAGGTGGAACTCTGTGGCTCAACTTGCAGGTATGAACACATAAGCAAACAGCTCTCCTGAGTTTCGGGTCGGTTCGGTTCGAGTTTTGGAGTGTTCTATTAGTCACTTTAAATTGAGCATTTGTTTCCCCTCATCACTTCTCCTAAATTCAGTATTCGATCCCCTGTTCTTCCATCGCTTTTCTTCTTTGGTTTGAGTCATCATTTGTCTTTTTCTTTCTTCCAACTTCTTAAACTTTCAAAGCCAAACTTTTCCCTTTTTCTAATTCGTTTCTTCTTTTGGTGCATTCAGGATTGAAAAGGAATGGGAAGAGTTGTAGGTTGAGATGGGTAAACTACCTGAGGCCAGACCTAAAGAGAGGGCAGATAACTCCACATGAAGAAAGCATAATTCTAGAGCTTCATGCTAGATGGGGGAACAGGTAATCCTCTCTTCTTTTTTGCCATGTTAAGGGGCCCAAGTTTAACAAGAATTTTCGGGTTCGGTATCATACTTGAAAATATGAAGTGTCCAAAATTATGAATAGCTAAAAAGAAATAACCCTTGTAAATCCTGTAGGTGGTCTACCATTGCTAGAAGCTTGCCGGGAAGAACTGATAATGAAATAAAGAACTATTGGAGGACCCATTTCAAGAAAAAGGTAAAGGTAACTTCTATCTGCAATGAAAGGCCCAACCCTCGATTTTTAAGAAAGCATCAGTATCAACAGCAGCAGCAACAACAACAATATTGGGAGATCCTACGACGACAACAACAACATCGAGAACTCCTAAGACAGCAACAACTGAACCAACAACCTAATATGAAAACTGAACTAAGCAGCTCTAAGCCTCAAATAAGCCAGGAAACTTGTACTCCCATGATCAGTAACTACAATACCCAAATAACTGATCATCATGATCACCCAGGAAGCCTCTTGCTGTCAGTGCCTGAGGCAATTTCCATAGAGGACCAACAATTATGGGACGGATTCCTGTGGAATTTTGAGGATTTTCAAGGCAATCTCACACCAAATTCTGCATTTGGAAAAGCAAATATGCACGATCTAGTAACACCCTTTTGTTGA

mRNA sequence

AATGGACGTCTCAAGTGAATCCGAGAAGATAATAGCATATAAAAACGACATACTATCAAAAAGTAGCTCGAAATTGAGGCATGTGGGACGGGTATAGGCTATATCAGAGTACTAAGTTGATAGAAGCTTAGCTGATTGATGAATCATGGCTAAAAGAAAGATCTTAATCATGTGACAAATTATTCTCAAGCTTGGTTGATGTGAAACTATGATAATCTGCACTGAACCATTTCAAATCTGGAAAAATCCTACTGGAGAGAATCTAAATATGATCTATTTACAAGGCAAAAGAACACTATGATAGTTAAAAATATGGAGAGAATCTATGTATAATCTAGATGACTCCAAGCTCATCACTTTATAATATTTTTCCTAAAAGAATGATGGAAATCTAGTTAAAATAATCAAATGGGTCATCTTTCATAGAAGAAGAATAAGATTAGACAGTCCCAAAAAGAAGATGAAGTTTTAAAAAAAGGGAAAAGAGCAATACACAATAAAATATTGATGAGGACATATATGCCATTATATAATATTGTTTCGAAAATGATGATGATCACTATAACTTGAACAGTAGACATGATCAGAAAAACTATGAAACCATGAGTGAGTATATAAATATGCAGCAGATATTAACTAAATATGCCATAGAAATCTGGAAGAGAGACAGAGAGAGACAGAGAGAGGAAAAGTAAGGCTTTGGAAGATGATGATGATGATGAGTGAGCATTTTGGTTGGGGCAAAGTGGAGGAAGAAGGATGGAGGAAAGGGCCTTGGACTGCTGAAGAAGACAGGTTGCTGATTGAGTATGTGAGAGTTCATGGTGAAGGAAGGTGGAACTCTGTGGCTCAACTTGCAGGATTGAAAAGGAATGGGAAGAGTTGTAGGTTGAGATGGGTAAACTACCTGAGGCCAGACCTAAAGAGAGGGCAGATAACTCCACATGAAGAAAGCATAATTCTAGAGCTTCATGCTAGATGGGGGAACAGTAACTACAATACCCAAATAACTGATCATCATGATCACCCAGGAAGCCTCTTGCTGTCAGTGCCTGAGGCAATTTCCATAGAGGACCAACAATTATGGGACGGATTCCTGTGGAATTTTGAGGATTTTCAAGGCAATCTCACACCAAATTCTGCATTTGGAAAAGCAAATATGCACGATCTAGTAACACCCTTTTGTTGA

Coding sequence (CDS)

ATGATGATGATGATGAGTGAGCATTTTGGTTGGGGCAAAGTGGAGGAAGAAGGATGGAGGAAAGGGCCTTGGACTGCTGAAGAAGACAGGTTGCTGATTGAGTATGTGAGAGTTCATGGTGAAGGAAGGTGGAACTCTGTGGCTCAACTTGCAGGATTGAAAAGGAATGGGAAGAGTTGTAGGTTGAGATGGGTAAACTACCTGAGGCCAGACCTAAAGAGAGGGCAGATAACTCCACATGAAGAAAGCATAATTCTAGAGCTTCATGCTAGATGGGGGAACAGTAACTACAATACCCAAATAACTGATCATCATGATCACCCAGGAAGCCTCTTGCTGTCAGTGCCTGAGGCAATTTCCATAGAGGACCAACAATTATGGGACGGATTCCTGTGGAATTTTGAGGATTTTCAAGGCAATCTCACACCAAATTCTGCATTTGGAAAAGCAAATATGCACGATCTAGTAACACCCTTTTGTTGA

Protein sequence

MMMMMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITPHEESIILELHARWGNSNYNTQITDHHDHPGSLLLSVPEAISIEDQQLWDGFLWNFEDFQGNLTPNSAFGKANMHDLVTPFC
Homology
[Close]
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.8e-29
Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 1 

Query: 10 GWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLR 69
          G G   E   RKGPWT EED +LI Y+  HG+G WNS+A+ AGLKR GKSCRLRW+NYLR
Sbjct: 11 GSGSSAEAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLR 70

Query: 70 PDLKRGQITPHEESIILELHARWGN 95
          PD++RG ITP E+ II+ELHA+WGN
Sbjct: 71 PDVRRGNITPEEQLIIMELHAKWGN 95

[Close]
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 1 

Query: 20 RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITP 79
          RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP
Sbjct: 14 RKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITP 73

Query: 80 HEESIILELHARWGN 95
           E+ +I+ELHA+WGN
Sbjct: 74 EEQLLIMELHAKWGN 88

[Close]
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match: MYB24_ARATH (Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-28
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1 

Query: 20 RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITP 79
          RKGPWT EED +LI Y+  HGEG WNS+A+ AGLKR GKSCRLRW+NYLRPD++RG ITP
Sbjct: 18 RKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITP 77

Query: 80 HEESIILELHARWGN 95
           E+  I+ELHA+WGN
Sbjct: 78 EEQLTIMELHAKWGN 92

[Close]
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 1 

Query: 20 RKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRGQITP 79
          RKGPWT EED +LI ++  HGEG WN++A+ AGLKR GKSCRLRW+NYLRPD++RG ITP
Sbjct: 14 RKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITP 73

Query: 80 HEESIILELHARWGN 95
           E+ +I+ELHA+WGN
Sbjct: 74 EEQLLIMELHAKWGN 88

[Close]
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.3e-27
Identity = 50/81 (61.73%), Postives = 67/81 (82.72%), Query Frame = 1 

Query: 14 VEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLK 73
          ++EEG RKGPWT +ED LL+ +V + G+ RW+ +A+++GL R GKSCRLRWVNYL P LK
Sbjct: 2  MQEEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLK 61

Query: 74 RGQITPHEESIILELHARWGN 95
          RG++TP EE ++LELHA+WGN
Sbjct: 62 RGKMTPQEERLVLELHAKWGN 82

[Close]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match: A0A0A0LIF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169770 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-80
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 1 

Query: 1   MMMMMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSC 60
           MMMMM EHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSC
Sbjct: 2   MMMMMDEHFGWGKVAAEGWRKGPWTAEEDRLLMEYVRVHGEGRWNSVAHLAGLRRNGKSC 61

Query: 61  RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSNYNTQITDHHDHPGSLLLSVPEAIS 120
           RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSN+N QI   HD PGSLLLS+PEAIS
Sbjct: 62  RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSNFNPQI--DHDQPGSLLLSLPEAIS 121

Query: 121 IEDQQLWDGFLWNFEDFQGNLTPNSAFGKANMHDLVTPFC 161
           +ED QLWDG LWNFEDF  NLTPNSAFGKAN+H+LVTPFC
Sbjct: 122 MEDHQLWDGLLWNFEDFHTNLTPNSAFGKANVHNLVTPFC 159

[Close]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match: A0A0K0VKC6_MORAL (Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis GN=MYB3 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 5  MSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRW 64
          M+ H GWG +EEEGWRKGPWTA+EDRLLIEYVRVHGEGRWNSVA+LAGLKRNGKSCRLRW
Sbjct: 1  MAGHMGWGIIEEEGWRKGPWTADEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 65 VNYLRPDLKRGQITPHEESIILELHARWGN 95
          VNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 61 VNYLRPDLKRGQITPHEESIILELHARWGN 90

[Close]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match: A0A0K0VK45_MORAL (Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis GN=MYB3 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 5  MSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRW 64
          M+ H GWG +EEEGWRKGPWTA+EDRLLIEYVRVHGEGRWNSVA+LAGLKRNGKSCRLRW
Sbjct: 1  MAGHMGWGIIEEEGWRKGPWTADEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 65 VNYLRPDLKRGQITPHEESIILELHARWGN 95
          VNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 61 VNYLRPDLKRGQITPHEESIILELHARWGN 90

[Close]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match: W9R8W6_9ROSA (Myb-related protein 305 OS=Morus notabilis GN=L484_002769 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 5  MSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRW 64
          M+ H GWG +EEEGWRKGPWTA+EDRLLIEYVRVHGEGRWNSVA+LAGLKRNGKSCRLRW
Sbjct: 1  MAGHMGWGIIEEEGWRKGPWTADEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 65 VNYLRPDLKRGQITPHEESIILELHARWGN 95
          VNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 61 VNYLRPDLKRGQITPHEESIILELHARWGN 90

[Close]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match: A0A0D2RRS7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G073500 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 83/91 (91.21%), Postives = 86/91 (94.51%), Query Frame = 1 

Query: 4  MMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLR 63
          MM E FGWG +EEE WRKGPWTAEEDRLL EYVR+HGEGRWNSVA+LAGLKRNGKSCRLR
Sbjct: 5  MMGEQFGWGVIEEEAWRKGPWTAEEDRLLTEYVRLHGEGRWNSVARLAGLKRNGKSCRLR 64

Query: 64 WVNYLRPDLKRGQITPHEESIILELHARWGN 95
          WVNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 65 WVNYLRPDLKRGQITPHEESIILELHARWGN 95

[Close]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match: AT3G24310.1 (AT3G24310.1 myb domain protein 305)

HSP 1 Score: 172.6 bits (436), Expect = 2.0e-43
Identity = 77/85 (90.59%), Postives = 83/85 (97.65%), Query Frame = 1 

Query: 10 GWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLR 69
          GWG V EEGWRKGPWTAEEDRLLI+YV++HGEGRWNSVA+LAGLKRNGKSCRLRWVNYLR
Sbjct: 10 GWGMV-EEGWRKGPWTAEEDRLLIDYVQLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLR 69

Query: 70 PDLKRGQITPHEESIILELHARWGN 95
          PDLKRGQITPHEE+IILELHA+WGN
Sbjct: 70 PDLKRGQITPHEETIILELHAKWGN 93

[Close]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match: AT4G13480.1 (AT4G13480.1 myb domain protein 79)

HSP 1 Score: 167.9 bits (424), Expect = 5.0e-42
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 1 

Query: 16 EEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKRG 75
          EE WRKGPWTAEEDRLLIEYVRVHGEGRWNSV++LAGLKRNGKSCRLRWVNYLRPDLKRG
Sbjct: 3  EEVWRKGPWTAEEDRLLIEYVRVHGEGRWNSVSKLAGLKRNGKSCRLRWVNYLRPDLKRG 62

Query: 76 QITPHEESIILELHARWGN 95
          QITPHEESIILELHA+WGN
Sbjct: 63 QITPHEESIILELHAKWGN 81

[Close]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match: AT3G30210.1 (AT3G30210.1 myb domain protein 121)

HSP 1 Score: 137.1 bits (344), Expect = 9.4e-33
Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 1 

Query: 15  EEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPDLKR 74
           +++G RKGPWT EED+LL EYV  HGEGRW++VA+ AGL R+GKSCRLRWVNYLRP LKR
Sbjct: 23  QQQGCRKGPWTLEEDKLLAEYVTSHGEGRWSTVAKCAGLNRSGKSCRLRWVNYLRPGLKR 82

Query: 75  GQITPHEESIILELHARWGN 95
           GQITP EE IILELH+ WGN
Sbjct: 83  GQITPQEEGIILELHSLWGN 102

[Close]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match: AT5G49620.2 (AT5G49620.2 myb domain protein 78)

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-30
Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1 

Query: 13  KVEEE-GWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLRPD 72
           KVEEE   R+GPWT EED  LI Y+  HGEGRWNS+A+ A LKR GKSCRLRW+NYLRPD
Sbjct: 19  KVEEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAELKRTGKSCRLRWLNYLRPD 78

Query: 73  LKRGQITPHEESIILELHARWGNSN 97
           ++RG IT  E+ +ILELH RWGNSN
Sbjct: 79  VRRGNITLEEQLLILELHTRWGNSN 103

[Close]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match: AT3G27810.1 (AT3G27810.1 myb domain protein 21)

HSP 1 Score: 128.3 bits (321), Expect = 4.4e-30
Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 1 

Query: 10 GWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRWVNYLR 69
          G G   E   RKGPWT EED +LI Y+  HG+G WNS+A+ AGLKR GKSCRLRW+NYLR
Sbjct: 11 GSGSSAEAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLR 70

Query: 70 PDLKRGQITPHEESIILELHARWGN 95
          PD++RG ITP E+ II+ELHA+WGN
Sbjct: 71 PDVRRGNITPEEQLIIMELHAKWGN 95

[Close]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match: gi|700206434|gb|KGN61553.1| (hypothetical protein Csa_2G169770 [Cucumis sativus])

HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 1 

Query: 1   MMMMMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSC 60
           MMMMM EHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSC
Sbjct: 2   MMMMMDEHFGWGKVAAEGWRKGPWTAEEDRLLMEYVRVHGEGRWNSVAHLAGLRRNGKSC 61

Query: 61  RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSNYNTQITDHHDHPGSLLLSVPEAIS 120
           RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSN+N QI   HD PGSLLLS+PEAIS
Sbjct: 62  RLRWVNYLRPDLKRGQITPHEESIILELHARWGNSNFNPQI--DHDQPGSLLLSLPEAIS 121

Query: 121 IEDQQLWDGFLWNFEDFQGNLTPNSAFGKANMHDLVTPFC 161
           +ED QLWDG LWNFEDF  NLTPNSAFGKAN+H+LVTPFC
Sbjct: 122 MEDHQLWDGLLWNFEDFHTNLTPNSAFGKANVHNLVTPFC 159

[Close]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match: gi|449458916|ref|XP_004147192.1| (PREDICTED: transcription factor MYB24-like [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 1 

Query: 1  MMMMMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSC 60
          MMMMM EHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSC
Sbjct: 2  MMMMMDEHFGWGKVAAEGWRKGPWTAEEDRLLMEYVRVHGEGRWNSVAHLAGLRRNGKSC 61

Query: 61 RLRWVNYLRPDLKRGQITPHEESIILELHARWGN 95
          RLRWVNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 62 RLRWVNYLRPDLKRGQITPHEESIILELHARWGN 95

[Close]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match: gi|659121516|ref|XP_008460699.1| (PREDICTED: myb-related protein 305-like [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 1 

Query: 1  MMMMMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSC 60
          MMMMM EHFGWGKV  EGWRKGPWTAEEDRLL+EYVRVHGEGRWNSVA LAGL+RNGKSC
Sbjct: 1  MMMMMGEHFGWGKVAAEGWRKGPWTAEEDRLLMEYVRVHGEGRWNSVAHLAGLRRNGKSC 60

Query: 61 RLRWVNYLRPDLKRGQITPHEESIILELHARWGN 95
          RLRWVNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 61 RLRWVNYLRPDLKRGQITPHEESIILELHARWGN 94

[Close]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match: gi|902640810|gb|AKS03960.1| (transcription factor GAMYB-like protein [Morus alba var. multicaulis])

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-44
Identity = 83/90 (92.22%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 5  MSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLRW 64
          M+ H GWG +EEEGWRKGPWTA+EDRLLIEYVRVHGEGRWNSVA+LAGLKRNGKSCRLRW
Sbjct: 1  MAGHMGWGIIEEEGWRKGPWTADEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRW 60

Query: 65 VNYLRPDLKRGQITPHEESIILELHARWGN 95
          VNYLRPDLKRGQITPHEESIILELHARWGN
Sbjct: 61 VNYLRPDLKRGQITPHEESIILELHARWGN 90

[Close]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match: gi|470120947|ref|XP_004296547.1| (PREDICTED: myb-related protein 305 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-44
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 1 

Query: 4  MMSEHFGWGKVEEEGWRKGPWTAEEDRLLIEYVRVHGEGRWNSVAQLAGLKRNGKSCRLR 63
          MM+ H GWG +EEEGWRKGPWT+EEDRLLIEYVR+HGEGRWNSVA+LAGLKRNGKSCRLR
Sbjct: 5  MMAAHMGWGIIEEEGWRKGPWTSEEDRLLIEYVRLHGEGRWNSVARLAGLKRNGKSCRLR 64

Query: 64 WVNYLRPDLKRGQITPHEESIILELHARWGN 95
          WVNYLRPDLKRGQITPHEESIIL+LHARWGN
Sbjct: 65 WVNYLRPDLKRGQITPHEESIILQLHARWGN 95

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g02110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB21_ARATH7.8e-2965.88Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1[more]
MYB05_ANTMA1.3e-2870.67Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1[more]
MYB24_ARATH2.9e-2870.67Transcription factor MYB24 OS=Arabidopsis thaliana GN=MYB24 PE=1 SV=1[more]
MYB40_ANTMA5.0e-2868.00Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1[more]
MYB48_ARATH4.3e-2761.73Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1[more]
BLAST of Cp4.1LG17g02110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIF8_CUCSA1.8e-8087.50Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169770 PE=4 SV=1[more]
A0A0K0VKC6_MORAL1.2e-4492.22Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis GN=MYB3 P... [more]
A0A0K0VK45_MORAL1.2e-4492.22Transcription factor GAMYB-like protein OS=Morus alba var. multicaulis GN=MYB3 P... [more]
W9R8W6_9ROSA1.2e-4492.22Myb-related protein 305 OS=Morus notabilis GN=L484_002769 PE=4 SV=1[more]
A0A0D2RRS7_GOSRA1.6e-4491.21Uncharacterized protein OS=Gossypium raimondii GN=B456_006G073500 PE=4 SV=1[more]
BLAST of Cp4.1LG17g02110 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24310.12.0e-4390.59 myb domain protein 305[more]
AT4G13480.15.0e-4294.94 myb domain protein 79[more]
AT3G30210.19.4e-3375.00 myb domain protein 121[more]
AT5G49620.23.3e-3069.41 myb domain protein 78[more]
AT3G27810.14.4e-3065.88 myb domain protein 21[more]
BLAST of Cp4.1LG17g02110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206434|gb|KGN61553.1|2.5e-8087.50hypothetical protein Csa_2G169770 [Cucumis sativus][more]
gi|449458916|ref|XP_004147192.1|2.8e-4793.62PREDICTED: transcription factor MYB24-like [Cucumis sativus][more]
gi|659121516|ref|XP_008460699.1|2.8e-4793.62PREDICTED: myb-related protein 305-like [Cucumis melo][more]
gi|902640810|gb|AKS03960.1|1.7e-4492.22transcription factor GAMYB-like protein [Morus alba var. multicaulis][more]
gi|470120947|ref|XP_004296547.1|1.7e-4490.11PREDICTED: myb-related protein 305 isoform X1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g02110.1Cp4.1LG17g02110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 21..68
score: 4.6
IPR001005SANT/Myb domainSMARTSM00717santcoord: 20..70
score: 1.9
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 13..71
score: 5.1E-24coord: 72..96
score: 1.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 22..95
score: 2.45
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 16..72
score: 24
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 14..94
score: 1.4
NoneNo IPR availablePANTHERPTHR10641:SF456MYB DOMAIN PROTEIN 79coord: 14..94
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g02110Cucsa.255900Cucumber (Gy14) v1cgycpeB0675
Cp4.1LG17g02110Cucsa.383230Cucumber (Gy14) v1cgycpeB1009
Cp4.1LG17g02110CmaCh14G018520Cucurbita maxima (Rimu)cmacpeB266
Cp4.1LG17g02110CmaCh08G010530Cucurbita maxima (Rimu)cmacpeB916
Cp4.1LG17g02110CmoCh14G018970Cucurbita moschata (Rifu)cmocpeB230
Cp4.1LG17g02110CmoCh08G010240Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g02110Cla021474Watermelon (97103) v1cpewmB331
Cp4.1LG17g02110Cla007626Watermelon (97103) v1cpewmB334
Cp4.1LG17g02110Csa2G169770Cucumber (Chinese Long) v2cpecuB306
Cp4.1LG17g02110Csa3G134010Cucumber (Chinese Long) v2cpecuB310
Cp4.1LG17g02110MELO3C006366Melon (DHL92) v3.5.1cpemeB316
Cp4.1LG17g02110MELO3C023051Melon (DHL92) v3.5.1cpemeB310
Cp4.1LG17g02110ClCG06G007340Watermelon (Charleston Gray)cpewcgB294
Cp4.1LG17g02110ClCG05G003890Watermelon (Charleston Gray)cpewcgB293
Cp4.1LG17g02110CSPI03G11470Wild cucumber (PI 183967)cpecpiB312
Cp4.1LG17g02110CSPI02G09910Wild cucumber (PI 183967)cpecpiB306
Cp4.1LG17g02110Lsi09G011850Bottle gourd (USVL1VR-Ls)cpelsiB254
Cp4.1LG17g02110MELO3C023051.2Melon (DHL92) v3.6.1cpemedB362
Cp4.1LG17g02110MELO3C006366.2Melon (DHL92) v3.6.1cpemedB371
Cp4.1LG17g02110CsaV3_2G012330Cucumber (Chinese Long) v3cpecucB0377
Cp4.1LG17g02110CsaV3_3G011570Cucumber (Chinese Long) v3cpecucB0385
Cp4.1LG17g02110Bhi01G000479Wax gourdcpewgoB0402
Cp4.1LG17g02110Bhi12G001346Wax gourdcpewgoB0385
Cp4.1LG17g02110Carg16528Silver-seed gourdcarcpeB0333
Cp4.1LG17g02110Carg10994Silver-seed gourdcarcpeB1503
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g02110Cp4.1LG03g09700Cucurbita pepo (Zucchini)cpecpeB333
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g02110Wax gourdcpewgoB0388
Cp4.1LG17g02110Wax gourdcpewgoB0404
Cp4.1LG17g02110Cucurbita pepo (Zucchini)cpecpeB169
Cp4.1LG17g02110Cucurbita pepo (Zucchini)cpecpeB340
Cp4.1LG17g02110Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG17g02110Cucurbita maxima (Rimu)cmacpeB388
Cp4.1LG17g02110Cucurbita maxima (Rimu)cmacpeB631
Cp4.1LG17g02110Cucurbita maxima (Rimu)cmacpeB824
Cp4.1LG17g02110Cucurbita moschata (Rifu)cmocpeB351
Cp4.1LG17g02110Cucurbita moschata (Rifu)cmocpeB580
Cp4.1LG17g02110Cucurbita moschata (Rifu)cmocpeB777
Cp4.1LG17g02110Wild cucumber (PI 183967)cpecpiB310
Cp4.1LG17g02110Bottle gourd (USVL1VR-Ls)cpelsiB267
Cp4.1LG17g02110Bottle gourd (USVL1VR-Ls)cpelsiB269
Cp4.1LG17g02110Watermelon (Charleston Gray)cpewcgB306
Cp4.1LG17g02110Watermelon (97103) v1cpewmB326
Cp4.1LG17g02110Melon (DHL92) v3.5.1cpemeB309
Cp4.1LG17g02110Cucumber (Gy14) v2cgybcpeB203
Cp4.1LG17g02110Cucumber (Gy14) v2cgybcpeB352
Cp4.1LG17g02110Cucumber (Gy14) v2cgybcpeB354
Cp4.1LG17g02110Melon (DHL92) v3.6.1cpemedB361
Cp4.1LG17g02110Silver-seed gourdcarcpeB0323
Cp4.1LG17g02110Silver-seed gourdcarcpeB1096
Cp4.1LG17g02110Silver-seed gourdcarcpeB1330
Cp4.1LG17g02110Cucumber (Chinese Long) v3cpecucB0383