Carg15054 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15054
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	exonuclease mut-7 homolog
Location	Cucurbita_argyrosperma_scaffold_078 : 296359 .. 298856 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATCCCGCGTATTAATCGAATTTCACGTTTTATACGTCTTCTTATGGATCCCCCGAACGGCCGGCCTTCCTTCGAAATCCACATTGTCTCTTCCGTCGACTCTCCTGACTTCGGTCAGCTAACCCGCACGCTGACTCGCTCTAAGCTCATTGCGCTCGACGCCGAGTGGAAGCCCCTTCGATCTCCTAATCATTCTTCATTTCCCAGAGTATCGCTTCTCCAGATCGCTTGCCAATTCCACTTGGACCAGCCGAACGATTCCGTGGTTTTTCTGCTCGACCTGCTGTCGCTTCCTTTATCCTCAGTTGGGGATTTGTTAAGGGATGTGTTTGTTTCACCCCATGTTTTGAAATTGGGTTTTCGATTTAAGCAAGATTTAGTTAACTTGTCGACTACTTTCTGCTCCTATGGCGGCGTCTCTGGGCTTGATCGTGTAAGTGTTTGCTTCTTTTGTTTCGTTTCGTAGCTCGTATTTGAGTTCCGGTGTTTCCAGGTCAGTATTTTAAGTTTCTCCTTATATGTATTTTTTTCTAGATTGAACCCTTTATGGATATTACGAGCATATACAATCATCTTCACCATAAGCAATATGGAAGAAAGATGCATAAACAAGCGAAGAGTCTTGCCGCTATCTGCAGTGAAGTTCTGGAATTTTCTCTTTCGAAGGTTTGCCCATTTCACTTCCACATGTTTCTAGTTTCACGTTCTATAACAGTACTTCAAATTACCTTTTTGTTTGCATCTAACCAATATTAGCTGTTATATATTTTTTCAATTCAGTGATGTTTGATAACCAAATTATTCAGTTGTAGCTGTCCTAGTAGGCTGCTTTGGTGGTCTTTTAGAGCTTTCTCTTGAATCTTCCCGATGAGCTGAGGCTCTTCCTCAAGTCCATATGATGAAGTACTTTTGTACTAATTGTTAACCTTGATTTGTATCTTCTTTAGGAACTTCAATGTAGTGATTGGTCCTATCGTCCCCTCACAGAAGAGCAGATAGCATACGCAGCCATGGATGCCCACTGCCTGCTCGAAATCTTTAATATCTTCTACTCCAAGGTTCTAAAAGAAGGTCTGTCGTGTCTGAACCTTGGGATTTCTAGATCCAAGATTTCTGTTGATCCATAATACTTCTGTCTATAAGAAAGCCTGAAGGAAAATGATTTCTTGAGTTTCCATGTTAAAATTACCCAATGAGCTCAGAGGACATTTAACTCCGTAAGGAAGTAACATAGGAAGAATATAATGTCTGTGCCCTTCATGTCTATGGGATTCTAGTTAGCAGTGTTATTCTCTTTTTTCATTTTTTTTTTAAAAAAAAAGAGAGAAAAGAGTCTTTTCCTCCACTCCAAATTATATTAACAGTTTTATCAGTTCTCTAGAACATTTTCTTGTGCTTGGGAACTCCACAACTAATGGTGGCTATTTATTCTATTTTTTTCAAACTCTGAATTCATTTCCATTGAAGTCTGCTAATTCGATTGCCAAAGCTTTTGATTCACCCTTGCATGTTCTCAAGCCAATAGCTGATTTACATCACATATAAGGAGTCAGATGGATGTTTCACATTATTTAGCATATTAAACAAGTCACTTTAGGTAGAAACCTCTGTAGTTGTTACAATATTGATGTGGTCAACTGTTGTTCTGAAAGTTTATGATTACCTCATGCATATCGAAGCCTATATTCACGATGCTATTATAGATTGATGGGAAAGAGCAATATTGGAAGTTACAACTCAGTATGCACCATTTGAAGTCAAACCAGTTTGGTTCCCTTCAACTTCCCTCTTAGAGCAACTGCCTTTCTCTAAGTATATGAGAATTGGTTAGAATTTCTACTATTTATTTTGCTGCTTCCTAGATTTTGCAGATTTTTACTCCCCACCCCCTTCCAAGTATAAATGATAGCAAAGTGATTAACTGTCCCTGTGTGTTGGATTTTCAACTATCCTATAGATTATGAAATTTGTGATTATTAATTCTAATGTCCAGGAGATGTTTTAAGGAACGTTTCTGCAGTTCCTTCCATTGAAGTGAATATTGGGTTGAAAGTGATTCTGGAAAATCAAGATACGAATGAGAAGATATTAAGGACCAAGATTTCTGAAGCCTCATACATTATCAGAGCTACTGCATCTGATTTTCCACAGAGTACGGCTACTGTAAGGGCACATTGTTCTGCATCATCGAGTATAAATTGTATGCCTATGGATGAAGATCTTCTGAAAATTGTCAAGAGATATGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAATGCCCAGGACCTCCAAAAGAAAAGGCAAGAGATCATCGACTATGAAAGTGGTTTGCAGTGAAAAGAAAATACTGGGTGTTGAAGATTGGCAGGGCCAACCACCGTGGGATTTGTCCTTAGGGGGTGATGGATGCCCTAAATTTCTATGTGACGTTATGGTAAATATTTATTTTTCCCCCTTTCTCCTTGAGGCTTGTAGGCTTTATTTTCTTAAATAA

mRNA sequence

GCAATCCCGCGTATTAATCGAATTTCACGTTTTATACGTCTTCTTATGGATCCCCCGAACGGCCGGCCTTCCTTCGAAATCCACATTGTCTCTTCCGTCGACTCTCCTGACTTCGGTCAGCTAACCCGCACGCTGACTCGCTCTAAGCTCATTGCGCTCGACGCCGAGTGGAAGCCCCTTCGATCTCCTAATCATTCTTCATTTCCCAGAGTATCGCTTCTCCAGATCGCTTGCCAATTCCACTTGGACCAGCCGAACGATTCCGTGGTTTTTCTGCTCGACCTGCTGTCGCTTCCTTTATCCTCAGTTGGGGATTTGTTAAGGGATGTGTTTGTTTCACCCCATGTTTTGAAATTGGGTTTTCGATTTAAGCAAGATTTAGTTAACTTGTCGACTACTTTCTGCTCCTATGGCGGCGTCTCTGGGCTTGATCGTATTGAACCCTTTATGGATATTACGAGCATATACAATCATCTTCACCATAAGCAATATGGAAGAAAGATGCATAAACAAGCGAAGAGTCTTGCCGCTATCTGCAGTGAAGTTCTGGAATTTTCTCTTTCGAAGGAACTTCAATGTAGTGATTGGTCCTATCGTCCCCTCACAGAAGAGCAGATAGCATACGCAGCCATGGATGCCCACTGCCTGCTCGAAATCTTTAATATCTTCTACTCCAAGGTTCTAAAAGAAGGAGATGTTTTAAGGAACGTTTCTGCAGTTCCTTCCATTGAAGTGAATATTGGGTTGAAAGTGATTCTGGAAAATCAAGATACGAATGAGAAGATATTAAGGACCAAGATTTCTGAAGCCTCATACATTATCAGAGCTACTGCATCTGATTTTCCACAGAGTACGGCTACTGTAAGGGCACATTGTTCTGCATCATCGAGTATAAATTGTATGCCTATGGATGAAGATCTTCTGAAAATTGTCAAGAGATATGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAATGCCCAGGACCTCCAAAAGAAAAGGCAAGAGATCATCGACTATGAAAGTGGTTTGCAGTGAAAAGAAAATACTGGGTGTTGAAGATTGGCAGGGCCAACCACCGTGGGATTTGTCCTTAGGGGGTGATGGATGCCCTAAATTTCTATGTGACGTTATGGTAAATATTTATTTTTCCCCCTTTCTCCTTGAGGCTTGTAGGCTTTATTTTCTTAAATAA

Coding sequence (CDS)

ATGGATCCCCCGAACGGCCGGCCTTCCTTCGAAATCCACATTGTCTCTTCCGTCGACTCTCCTGACTTCGGTCAGCTAACCCGCACGCTGACTCGCTCTAAGCTCATTGCGCTCGACGCCGAGTGGAAGCCCCTTCGATCTCCTAATCATTCTTCATTTCCCAGAGTATCGCTTCTCCAGATCGCTTGCCAATTCCACTTGGACCAGCCGAACGATTCCGTGGTTTTTCTGCTCGACCTGCTGTCGCTTCCTTTATCCTCAGTTGGGGATTTGTTAAGGGATGTGTTTGTTTCACCCCATGTTTTGAAATTGGGTTTTCGATTTAAGCAAGATTTAGTTAACTTGTCGACTACTTTCTGCTCCTATGGCGGCGTCTCTGGGCTTGATCGTATTGAACCCTTTATGGATATTACGAGCATATACAATCATCTTCACCATAAGCAATATGGAAGAAAGATGCATAAACAAGCGAAGAGTCTTGCCGCTATCTGCAGTGAAGTTCTGGAATTTTCTCTTTCGAAGGAACTTCAATGTAGTGATTGGTCCTATCGTCCCCTCACAGAAGAGCAGATAGCATACGCAGCCATGGATGCCCACTGCCTGCTCGAAATCTTTAATATCTTCTACTCCAAGGTTCTAAAAGAAGGAGATGTTTTAAGGAACGTTTCTGCAGTTCCTTCCATTGAAGTGAATATTGGGTTGAAAGTGATTCTGGAAAATCAAGATACGAATGAGAAGATATTAAGGACCAAGATTTCTGAAGCCTCATACATTATCAGAGCTACTGCATCTGATTTTCCACAGAGTACGGCTACTGTAAGGGCACATTGTTCTGCATCATCGAGTATAAATTGTATGCCTATGGATGAAGATCTTCTGAAAATTGTCAAGAGATATGGTGAAAAAATTATTTTGAAAGAGTCAGACAAAATGCCCAGGACCTCCAAAAGAAAAGGCAAGAGATCATCGACTATGAAAGTGGTTTGCAGTGAAAAGAAAATACTGGGTGTTGAAGATTGGCAGGGCCAACCACCGTGGGATTTGTCCTTAGGGGGTGATGGATGCCCTAAATTTCTATGTGACGTTATGGTAAATATTTATTTTTCCCCCTTTCTCCTTGAGGCTTGTAGGCTTTATTTTCTTAAATAA

Protein sequence

MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLCDVMVNIYFSPFLLEACRLYFLK

Homology

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BLAST of Carg15054 vs. NCBI nr
Match: XP_022923062.1 (exonuclease mut-7 homolog [Cucurbita moschata])

HSP 1 Score: 724.9 bits (1870), Expect = 1.4e-205
Identity = 361/364 (99.18%), Postives = 362/364 (99.45%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MDPPNGRPSFEIHIVSSV SPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ
Sbjct: 5   MDPPNGRPSFEIHIVSSVHSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 64

Query: 61  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 120
           IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC
Sbjct: 65  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 124

Query: 121 SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 180
           SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD
Sbjct: 125 SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 184

Query: 181 WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILEN 240
           WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILE 
Sbjct: 185 WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILEK 244

Query: 241 QDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYG 300
           QDT+EKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYG
Sbjct: 245 QDTHEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYG 304

Query: 301 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 360
           EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC
Sbjct: 305 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 364

Query: 361 DVMV 365
           DVMV
Sbjct: 365 DVMV 368

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BLAST of Carg15054 vs. NCBI nr
Match: XP_023553430.1 (exonuclease mut-7 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 714.1 bits (1842), Expect = 2.5e-202
Identity = 356/364 (97.80%), Postives = 359/364 (98.63%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MDPPN RPSFEIHIVSSVDSPD+ QLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ
Sbjct: 1   MDPPNARPSFEIHIVSSVDSPDYTQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60

Query: 61  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 120
           IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC
Sbjct: 61  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 120

Query: 121 SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 180
           SYGGVSGLDRIEPFMDITSIYNHL HKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD
Sbjct: 121 SYGGVSGLDRIEPFMDITSIYNHLQHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 180

Query: 181 WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILEN 240
           WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILE 
Sbjct: 181 WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILEK 240

Query: 241 QDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYG 300
           QDT+EKILRTKISEASYIIRATASDFPQST TVRAHCSASSSI+CMPMDEDLLKIVKRYG
Sbjct: 241 QDTHEKILRTKISEASYIIRATASDFPQSTPTVRAHCSASSSIDCMPMDEDLLKIVKRYG 300

Query: 301 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 360
           EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC
Sbjct: 301 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 360

Query: 361 DVMV 365
           DVMV
Sbjct: 361 DVMV 364

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BLAST of Carg15054 vs. NCBI nr
Match: XP_022984501.1 (exonuclease mut-7 homolog [Cucurbita maxima])

HSP 1 Score: 708.0 bits (1826), Expect = 1.8e-200
Identity = 354/364 (97.25%), Postives = 359/364 (98.63%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MDPPNGRPSFEIHIVSSVDSPDF QLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ
Sbjct: 1   MDPPNGRPSFEIHIVSSVDSPDFSQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60

Query: 61  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 120
           IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC
Sbjct: 61  IACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFC 120

Query: 121 SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 180
           SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD
Sbjct: 121 SYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSD 180

Query: 181 WSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILEN 240
           WSYRPLTEEQIAYAAMDAHCLLEIFNIF SKVL+EGDVLRNVS VPSIE+N+GLKVILE 
Sbjct: 181 WSYRPLTEEQIAYAAMDAHCLLEIFNIFNSKVLQEGDVLRNVS-VPSIEMNLGLKVILEK 240

Query: 241 QDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYG 300
           QD++EKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDE LLKIVKRYG
Sbjct: 241 QDSHEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEGLLKIVKRYG 300

Query: 301 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 360
           EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC
Sbjct: 301 EKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLC 360

Query: 361 DVMV 365
           DVMV
Sbjct: 361 DVMV 363

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BLAST of Carg15054 vs. NCBI nr
Match: XP_004146233.1 (PREDICTED: exonuclease mut-7 homolog [Cucumis sativus] >KGN57650.1 hypothetical protein Csa_3G238160 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 298/367 (81.20%), Postives = 321/367 (87.47%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPN-HSSFPRVSLL 60
           MD    RP+FEIH+VSS+DSP+F  LT TLTRS LIALDAEWKPL++P+ HSSFPRVSLL
Sbjct: 1   MDSHIARPAFEIHLVSSIDSPEFTLLTHTLTRSHLIALDAEWKPLQTPDQHSSFPRVSLL 60

Query: 61  QIACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTF 120
           QIACQFH D  NDSV FLLDLLS+PLSS+  LLRDVFVSP+VLKLGFRFKQDLV LSTTF
Sbjct: 61  QIACQFHSDHRNDSVAFLLDLLSVPLSSIWHLLRDVFVSPYVLKLGFRFKQDLVYLSTTF 120

Query: 121 CSY--GGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQ 180
            SY  GGVSGLDRIEPFMDI SIY HL HKQ GRK+HKQ+KSL AICSEVL FSLSKELQ
Sbjct: 121 SSYGGGGVSGLDRIEPFMDIASIYYHLQHKQKGRKLHKQSKSLTAICSEVLGFSLSKELQ 180

Query: 181 CSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVI 240
           CSDWS RPLTEEQIAYAAMDAHCLLEIFN+FYSKVLKEGDVLRNVSAVPS E+N GL+VI
Sbjct: 181 CSDWSVRPLTEEQIAYAAMDAHCLLEIFNVFYSKVLKEGDVLRNVSAVPSTEMNTGLRVI 240

Query: 241 LENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVK 300
           LE QD +EKILRTK+SEAS IIRATAS FPQS A +R  CSASSSINCMPMDEDL K+VK
Sbjct: 241 LEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMDEDLQKVVK 300

Query: 301 RYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPK 360
            YGE+IILKESDK P+TSKRK KRSSTMKV C EK+I+  EDW G PPWDLSLGGDGCPK
Sbjct: 301 SYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLSLGGDGCPK 360

Query: 361 FLCDVMV 365
           FLCDVMV
Sbjct: 361 FLCDVMV 367

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BLAST of Carg15054 vs. NCBI nr
Match: XP_022141215.1 (Werner syndrome ATP-dependent helicase homolog [Momordica charantia])

HSP 1 Score: 585.5 bits (1508), Expect = 1.3e-163
Identity = 300/365 (82.19%), Postives = 326/365 (89.32%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNH-SSFPRVSLL 60
           MDP NGR + +IHIVSS+DSP+FGQLT+ LT SKLI LDAEWKPLR+PN  S FPRVSLL
Sbjct: 1   MDPQNGR-ALKIHIVSSIDSPEFGQLTQALTCSKLIGLDAEWKPLRTPNQPSPFPRVSLL 60

Query: 61  QIACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTF 120
           QIACQF  D+ NDS+VFLLDLLS+PLSSV DLLRDVFVSP VLKLGFRFKQDLV LSTTF
Sbjct: 61  QIACQFDSDEGNDSLVFLLDLLSIPLSSVWDLLRDVFVSPDVLKLGFRFKQDLVYLSTTF 120

Query: 121 CSYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCS 180
           CSYGGVSG DRIEPF+DITSIY HL HKQ GRKMHKQ KSLAAICSEVL FSLSKELQCS
Sbjct: 121 CSYGGVSGFDRIEPFIDITSIYTHLQHKQNGRKMHKQTKSLAAICSEVLGFSLSKELQCS 180

Query: 181 DWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILE 240
           DWS RPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGD+L+NVSAVPS E+N GLK+ILE
Sbjct: 181 DWSCRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDLLKNVSAVPSSEMNTGLKMILE 240

Query: 241 NQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRY 300
           NQD +EKILR KISEAS I+RATASDFPQS AT+R +CS SSSIN  PMDEDLLKIV++Y
Sbjct: 241 NQDMHEKILRIKISEASNIVRATASDFPQSIATLRENCSTSSSINFRPMDEDLLKIVRKY 300

Query: 301 GEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFL 360
           GEKIILK+SDK PRTSKRKGKRSST+KVVC+EK+++ VE   G PPWDLS GGDGCPKFL
Sbjct: 301 GEKIILKDSDKKPRTSKRKGKRSSTLKVVCNEKQLVYVE---GLPPWDLSFGGDGCPKFL 360

Query: 361 CDVMV 365
           CDVMV
Sbjct: 361 CDVMV 361

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BLAST of Carg15054 vs. TAIR10
Match: AT5G24340.1 (3'-5' exonuclease domain-containing protein)

HSP 1 Score: 350.9 bits (899), Expect = 9.9e-97
Identity = 187/357 (52.38%), Postives = 250/357 (70.03%), Query Frame = 0


Query: 9   SFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQF-HL 68
           + +I++VSS DS +F  L  + TRS +IALDAEWKP  S N SSFP V+LLQ+AC+  H 
Sbjct: 4   NLKIYLVSSTDSSEFTHLKWSFTRSTIIALDAEWKPQHS-NTSSFPTVTLLQVACRLSHA 63

Query: 69  DQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSG 128
              +D  VFL+DL S+ L SV +LL D+FVSP VLKLGFRFKQDLV LS+TF  +G   G
Sbjct: 64  TDVSD--VFLIDLSSIHLPSVWELLNDMFVSPDVLKLGFRFKQDLVYLSSTFTQHGCEGG 123

Query: 129 LDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLT 188
              ++ ++DITSIYN+L HK++GRK  K  KSLAAIC E+L+ SLSKELQCSDWSYRPLT
Sbjct: 124 FQEVKQYLDITSIYNYLQHKRFGRKAPKDIKSLAAICKEMLDISLSKELQCSDWSYRPLT 183

Query: 189 EEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVILENQDTNEKI 248
           EEQ  YAA DAHCLL+IF++F      E  ++  ++      +N+GL+ IL   D + KI
Sbjct: 184 EEQKLYAATDAHCLLQIFDVF------EAHLVEGITVQDLRVINVGLQEILTESDYSSKI 243

Query: 249 LRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKRYGEKIILKE 308
           +  K+ +A+ +IR + S+  Q+ A         +++N MPMDE+LLKIV+++GE+I+LKE
Sbjct: 244 VTVKLCKATDVIR-SMSENGQNIA--NGVVPRKTTLNTMPMDENLLKIVRKFGERILLKE 303

Query: 309 SDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKFLCDVMV 365
           SD +P+  K+K +R      + + K+++   DWQG PPWD SLGGDGCPKFL DVMV
Sbjct: 304 SDLLPKKLKKKTRRRVASSTMNTNKQLVCSADWQGPPPWDSSLGGDGCPKFLLDVMV 348

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BLAST of Carg15054 vs. TAIR10
Match: AT1G56310.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-17
Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 27  TRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQFHLDQPNDSVVFLLDLLSL--- 86
           T  L   +++ +D EWKP      S   +VS++QI         +D+ +F+LDL+ L   
Sbjct: 372 TSFLEGCRVVGIDCEWKP-NYIKGSKQNKVSIMQIG--------SDTKIFILDLIKLYND 431

Query: 87  PLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFMDITSIYNH 146
               + + L  +  S   LKLG+ F+ D+  L+    SYG +   +R +  +DI +++N 
Sbjct: 432 ASEILDNCLSHILQSKSTLKLGYNFQCDIKQLA---LSYGDLKCFERYDMLLDIQNVFN- 491

Query: 147 LHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAAMDAHCLLE 206
              + +G         LA +  ++L  SL+K  + SDW  RPL++ Q+ YAA+DA  L+ 
Sbjct: 492 ---EPFG--------GLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAAVLIH 529

[Close]

BLAST of Carg15054 vs. TAIR10
Match: AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 56.6 bits (135), Expect = 3.9e-08
Identity = 51/180 (28.33%), Postives = 78/180 (43.33%), Query Frame = 0


Query: 25  QLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQFHLDQPNDSVVFLLDLLSLP 84
           +L   L + ++ A+D E   LR    S     +L+QI+   H +       FL+D  ++ 
Sbjct: 130 ELAEILAKEQVFAVDTEQHSLR----SFLGFTALIQIST--HEED------FLVD--TIA 189

Query: 85  LSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFMDITSIYNHL 144
           L  V  +LR VF  P++ K+      D++ L   F  Y                 + N  
Sbjct: 190 LHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIY-----------------VVNMF 249

Query: 145 HHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAAMDAHCLLEI 204
              +    + K  +SLA +   V   + +K LQ  DW  RPL+EE + YA  DAH LL I
Sbjct: 250 DTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYI 278

[Close]

BLAST of Carg15054 vs. TAIR10
Match: AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 47.0 bits (110), Expect = 3.1e-05
Identity = 34/132 (25.76%), Postives = 56/132 (42.42%), Query Frame = 0


Query: 76  FLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFM 135
           +++D   L +  +G  LR++F  P   K+     +D++ L   F  Y             
Sbjct: 310 YIVDTFKLRI-HIGPYLREIFKDPKKKKVMHGADRDIIWLQRDFGIY------------- 369

Query: 136 DITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAA 195
               + N     Q  R ++ +  SL  +       + +KE Q +DW  RPL EE   YA 
Sbjct: 370 ----VCNLFDTGQASRVLNLERNSLEFLLQHFCGVTANKEYQNADWRIRPLPEEMTRYAR 423

Query: 196 MDAHCLLEIFNI 208
            D H LL I+++
Sbjct: 430 EDTHYLLYIYDL 423

[Close]

BLAST of Carg15054 vs. Swiss-Prot
Match: sp|Q179T2|MUT7_AEDAE (Exonuclease mut-7 homolog OS=Aedes aegypti OX=7159 GN=AAEL005527 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-14
Identity = 62/215 (28.84%), Postives = 101/215 (46.98%), Query Frame = 0


Query: 2   DPPNGRPSFEIHI----VSSVDSPD-FGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRV 61
           D P+  P+  + +    V  VDS D F  +   L R  +IA D+EWK    P       V
Sbjct: 420 DAPDSEPAHTLRLDESHVHLVDSKDKFYAMLSDLCRQSMIAFDSEWK----PTFGGANEV 479

Query: 62  SLLQIACQFHLDQPNDSVVFLLDLLSLPLSSV--GDLLRDVFVSPHVLKLGFRFKQDLVN 121
           SL+Q+A            V+++D++   L  +    L ++VF    VLKL F    D+  
Sbjct: 480 SLIQLATW--------DDVYMIDVMVSQLEPLDWAALAKNVFNRDDVLKLSFAPSTDISM 539

Query: 122 LSTTFCSYGGVSGLDRIEPFMDITSIYNHLHH-KQYGRKMHKQA--KSLAAICSEVLEFS 181
                 S+  +         +D+  ++ H+     +    H+++  ++LA +    L   
Sbjct: 540 FQKALPSFNVMYSSQSTSAILDLQLLWRHVERFDSFRFPYHEESVNQNLANLVRLCLGKK 599

Query: 182 LSKELQCSDWSYRPLTEEQIAYAAMDAHCLLEIFN 207
           L K  Q S+W+ RPL +EQ+ YAA+DA CLLEI++
Sbjct: 600 LDKSNQFSNWAQRPLRKEQLRYAALDAFCLLEIYD 622

[Close]

BLAST of Carg15054 vs. Swiss-Prot
Match: sp|Q8N9H8|MUT7_HUMAN (Exonuclease mut-7 homolog OS=Homo sapiens OX=9606 GN=EXD3 PE=1 SV=3)

HSP 1 Score: 80.1 bits (196), Expect = 5.9e-14
Identity = 63/211 (29.86%), Postives = 99/211 (46.92%), Query Frame = 0


Query: 8   PSFEIHIVSSVDSPDFGQLTR----TLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIAC 67
           P   +H+++S     +  LTR     L   +++ +D EW P+        PR SLLQ+A 
Sbjct: 369 PRENVHLLAS-----WEDLTRHEGALLQCHQVVGVDVEWTPVFVA--GGRPRPSLLQVAV 428

Query: 68  QFHLDQPNDSVVFLLDLLSLPLSSVGD-------LLRDVFVSPHVLKLGFRFKQDLVNLS 127
           + H        VFLLD+L+L     G        L+  +   P + KLG+    DL  L 
Sbjct: 429 EGH--------VFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGYGMVGDLQKLG 488

Query: 128 TTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQY---GRKMHKQAKSLAAICSEVLEFSLS 187
           T+  +   V    +I   MD+  ++  +             ++ + L+ +  +VL  +L 
Sbjct: 489 TSCPALAHVE--KQILGGMDLLLVHRQMRVASVPAPAVDRARELRGLSLLVQQVLGTALD 548

Query: 188 KELQCSDWSYRPLTEEQIAYAAMDAHCLLEI 205
           K  Q S+W  RPL EEQ+ YAA DA+CLLE+
Sbjct: 549 KTQQLSNWDRRPLCEEQVIYAAADAYCLLEV 562

[Close]

BLAST of Carg15054 vs. Swiss-Prot
Match: sp|Q9VIF1|MUT7_DROME (Exonuclease mut-7 homolog OS=Drosophila melanogaster OX=7227 GN=Nbr PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.6e-09
Identity = 57/207 (27.54%), Postives = 100/207 (48.31%), Query Frame = 0


Query: 14  IVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQFHLDQPNDS 73
           IV+  D  +F ++   L +  +I LD+EW      ++    ++ +LQIA   +       
Sbjct: 412 IVNKAD--EFDRMLYHLQQECVIYLDSEWMQSVCGDN----QLCVLQIATGHN------- 471

Query: 74  VVFLLDLL---SLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDR 133
            V+L+D L   SL       L  ++F + ++ K+GF    DL  L     S      L  
Sbjct: 472 -VYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQR---SLPLQLRLQM 531

Query: 134 IEPFMDITSIYNHLHHKQYGRKM-----HKQAKSLAAICSEVLEFSLSKELQCSDWSYRP 193
              ++D+ +++  L  +++G ++     ++   +L  +    L   L+K  QCS+W+ RP
Sbjct: 532 PHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRP 591

Query: 194 LTEEQIAYAAMDAHCLLEIFNIFYSKV 213
           L  EQI YAA+DA CL+ I+N    +V
Sbjct: 592 LRREQILYAAIDARCLMLIYNTLIERV 601

[Close]

BLAST of Carg15054 vs. Swiss-Prot
Match: sp|A9LLI8|RP6L3_ARATH (Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.0e-07
Identity = 51/180 (28.33%), Postives = 78/180 (43.33%), Query Frame = 0


Query: 25  QLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQIACQFHLDQPNDSVVFLLDLLSLP 84
           +L   L + ++ A+D E   LR    S     +L+QI+   H +       FL+D  ++ 
Sbjct: 130 ELAEILAKEQVFAVDTEQHSLR----SFLGFTALIQIST--HEED------FLVD--TIA 189

Query: 85  LSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFMDITSIYNHL 144
           L  V  +LR VF  P++ K+      D++ L   F  Y                 + N  
Sbjct: 190 LHDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIY-----------------VVNMF 249

Query: 145 HHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAAMDAHCLLEI 204
              +    + K  +SLA +   V   + +K LQ  DW  RPL+EE + YA  DAH LL I
Sbjct: 250 DTAKACEVLSKPQRSLAYLLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYI 278

[Close]

BLAST of Carg15054 vs. Swiss-Prot
Match: sp|P34607|MUT7_CAEEL (Exonuclease mut-7 OS=Caenorhabditis elegans OX=6239 GN=mut-7 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 48/193 (24.87%), Postives = 85/193 (44.04%), Query Frame = 0


Query: 36  IALDAEWKPLR-SPNHSSFPRVSLLQIACQFHLDQPNDSVVFLLDLLSLPLSSVGD---- 95
           +  D+EWKP   +  H S  +++++Q+  +        + V+L+D + L  +++ D    
Sbjct: 432 VGFDSEWKPSNLTAVHDS--KIAIIQLFFK--------NCVWLVDCVELEKANMADDWWQ 491

Query: 96  -LLRDVFVSPHVLKLGFRFKQDLVNLSTTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQY 155
                +F    V  +GF  + DL  ++T          +  ++  M I    N    K+ 
Sbjct: 492 KFASRLFGDSPVKVVGFDMRNDLDAMAT----------IPALKSSMKIEDTKNAFDLKRL 551

Query: 156 GR----------KMHKQAKSLAAICSEVLEFSLSKELQCSDWSYRPLTEEQIAYAAMDAH 213
                       ++ K+   LA +   +L   L K  QCS+W  RPL ++QI YAA+DA 
Sbjct: 552 AENVCDIDMEILELPKKTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAV 604

[Close]

BLAST of Carg15054 vs. TrEMBL
Match: tr|A0A0A0L6Q0|A0A0A0L6Q0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238160 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 8.7e-164
Identity = 298/367 (81.20%), Postives = 321/367 (87.47%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPN-HSSFPRVSLL 60
           MD    RP+FEIH+VSS+DSP+F  LT TLTRS LIALDAEWKPL++P+ HSSFPRVSLL
Sbjct: 1   MDSHIARPAFEIHLVSSIDSPEFTLLTHTLTRSHLIALDAEWKPLQTPDQHSSFPRVSLL 60

Query: 61  QIACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTF 120
           QIACQFH D  NDSV FLLDLLS+PLSS+  LLRDVFVSP+VLKLGFRFKQDLV LSTTF
Sbjct: 61  QIACQFHSDHRNDSVAFLLDLLSVPLSSIWHLLRDVFVSPYVLKLGFRFKQDLVYLSTTF 120

Query: 121 CSY--GGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQ 180
            SY  GGVSGLDRIEPFMDI SIY HL HKQ GRK+HKQ+KSL AICSEVL FSLSKELQ
Sbjct: 121 SSYGGGGVSGLDRIEPFMDIASIYYHLQHKQKGRKLHKQSKSLTAICSEVLGFSLSKELQ 180

Query: 181 CSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVI 240
           CSDWS RPLTEEQIAYAAMDAHCLLEIFN+FYSKVLKEGDVLRNVSAVPS E+N GL+VI
Sbjct: 181 CSDWSVRPLTEEQIAYAAMDAHCLLEIFNVFYSKVLKEGDVLRNVSAVPSTEMNTGLRVI 240

Query: 241 LENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVK 300
           LE QD +EKILRTK+SEAS IIRATAS FPQS A +R  CSASSSINCMPMDEDL K+VK
Sbjct: 241 LEKQDMHEKILRTKVSEASNIIRATASGFPQSMANIRGICSASSSINCMPMDEDLQKVVK 300

Query: 301 RYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPK 360
            YGE+IILKESDK P+TSKRK KRSSTMKV C EK+I+  EDW G PPWDLSLGGDGCPK
Sbjct: 301 SYGERIILKESDKKPKTSKRKSKRSSTMKVGCIEKQIVSDEDWHGPPPWDLSLGGDGCPK 360

Query: 361 FLCDVMV 365
           FLCDVMV
Sbjct: 361 FLCDVMV 367

[Close]

BLAST of Carg15054 vs. TrEMBL
Match: tr|A0A1S3C2A3|A0A1S3C2A3_CUCME (exonuclease mut-7 homolog OS=Cucumis melo OX=3656 GN=LOC103496054 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 4.3e-163
Identity = 295/366 (80.60%), Postives = 321/366 (87.70%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPN-HSSFPRVSLL 60
           MD  N  P+FEIH+VSS+DSP+F  LT TLT S LIALDAEWKPL++P+  SSFPRVSLL
Sbjct: 1   MDSHNAGPAFEIHVVSSIDSPEFTLLTHTLTHSHLIALDAEWKPLQTPDQRSSFPRVSLL 60

Query: 61  QIACQFHLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVNLSTTF 120
           QIACQFH D  NDSV FLLDLLS+PLSS+  LLRDVFVSP+VLKLGFRFKQDLV LSTTF
Sbjct: 61  QIACQFHSDHRNDSVAFLLDLLSVPLSSIWHLLRDVFVSPYVLKLGFRFKQDLVYLSTTF 120

Query: 121 CSY-GGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSKELQC 180
            SY GGVSGLDRIEPFMDI SIY HL HKQ GRK+HKQ+KSLAAICSEVL FSLSKELQC
Sbjct: 121 SSYGGGVSGLDRIEPFMDIASIYYHLQHKQKGRKLHKQSKSLAAICSEVLGFSLSKELQC 180

Query: 181 SDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGLKVIL 240
           SDWS RPLTEEQIAYAAMDAHCLLEIFN+FYSKVLKEGD+LRNVSAVPS E+N GLKVIL
Sbjct: 181 SDWSVRPLTEEQIAYAAMDAHCLLEIFNVFYSKVLKEGDLLRNVSAVPSTEMNTGLKVIL 240

Query: 241 ENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLKIVKR 300
           E QD ++KILRTK+SEAS IIRATAS FPQS A +R +CS SSSINCMPMDEDL K+VK 
Sbjct: 241 EKQDMHKKILRTKVSEASNIIRATASGFPQSMANIRGNCSVSSSINCMPMDEDLQKVVKS 300

Query: 301 YGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDGCPKF 360
           YGE+I+LKESDK P+ SKRKGKRSSTMKV CSEK+I+  EDW G PPWDLSLGGDGCPKF
Sbjct: 301 YGERIVLKESDKKPKISKRKGKRSSTMKVGCSEKQIVSDEDWLGPPPWDLSLGGDGCPKF 360

Query: 361 LCDVMV 365
           LCDVMV
Sbjct: 361 LCDVMV 366

[Close]

BLAST of Carg15054 vs. TrEMBL
Match: tr|A0A2P4HGD8|A0A2P4HGD8_QUESU (Exonuclease mut-7 like OS=Quercus suber OX=58331 GN=CFP56_57229 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 4.8e-122
Identity = 233/373 (62.47%), Postives = 277/373 (74.26%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MDP N  P  +IHIVSS DSP+F  LT++LTRS ++ALDAEWKP+ +P  SSFP V+LLQ
Sbjct: 1   MDPQNPNP-LKIHIVSSTDSPEFTHLTQSLTRSSIVALDAEWKPISTP-QSSFPTVALLQ 60

Query: 61  IACQF---------HLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQD 120
           +ACQ             +  DSV FLLDLLS+PL S+ ++LR+VFVSP +LKLGFRFKQD
Sbjct: 61  LACQLGPQLTPDSDESTESLDSVTFLLDLLSIPLPSIWEILREVFVSPDILKLGFRFKQD 120

Query: 121 LVNLSTTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFS 180
           LV LS+TFC+ G   G DR+EPF+DITS YNHL HKQ+G+K+ KQ KSLA IC EVL FS
Sbjct: 121 LVYLSSTFCAQGCDPGFDRVEPFLDITSAYNHLQHKQHGKKIPKQTKSLANICEEVLGFS 180

Query: 181 LSKELQCSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVN 240
           LSKELQCSDWS RPLTEEQ  YAAMDAHCLLEIFNIF +KV+KEG+   N++     +VN
Sbjct: 181 LSKELQCSDWSRRPLTEEQKTYAAMDAHCLLEIFNIFQAKVVKEGNYFHNINKPAPPDVN 240

Query: 241 IGLKVILENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDED 300
           +GLK +LE  D N KILR K SEA  I+RATASDFPQ   TV        S+  MP+DE 
Sbjct: 241 LGLKEVLEKDDMNSKILRIKFSEALDIVRATASDFPQRIVTV----GGMRSMCTMPIDES 300

Query: 301 LLKIVKRYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLG 360
           LLK+VK YGEKI+LKESDK P+ SK+KGKR S  K    E ++  ++ W+G PPWDLSLG
Sbjct: 301 LLKVVKIYGEKILLKESDKKPKASKKKGKRRSPGK----ENQLENLDGWRGPPPWDLSLG 360

Query: 361 GDGCPKFLCDVMV 365
            DGCPKFLCDVMV
Sbjct: 361 SDGCPKFLCDVMV 363

[Close]

BLAST of Carg15054 vs. TrEMBL
Match: tr|A0A2I4GG00|A0A2I4GG00_9ROSI (uncharacterized protein LOC109007563 isoform X1 OS=Juglans regia OX=51240 GN=LOC109007563 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.3e-119
Identity = 218/370 (58.92%), Postives = 270/370 (72.97%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MD  N +P  +IH+V S DSP+F  LT +LTRS LIALDAEWKP+ +   S FP V+LLQ
Sbjct: 1   MDLRNQKP-LKIHLVCSTDSPEFTHLTESLTRSSLIALDAEWKPVHTGPQSYFPTVTLLQ 60

Query: 61  IACQF------HLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVN 120
           +AC+         D+  DS  FL+DL S+PLSS+ +LLRDVFVSP +LKLGFRFKQDL+ 
Sbjct: 61  LACELSPLLVSDPDELEDSATFLVDLTSIPLSSIWELLRDVFVSPDILKLGFRFKQDLIY 120

Query: 121 LSTTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSK 180
           LS+TFC  G   G DR+EPF+DITS+YNHL HK +GRK+ KQ KSLA IC E+L  SLSK
Sbjct: 121 LSSTFCEQGCDPGFDRVEPFLDITSVYNHLQHKLHGRKVSKQIKSLATICKELLGLSLSK 180

Query: 181 ELQCSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGL 240
           ELQCSDWS RPLTEEQ  YAAMDAHCLL+IFN+F++K +KEG    NV  +    V++GL
Sbjct: 181 ELQCSDWSRRPLTEEQKTYAAMDAHCLLKIFNVFHAKTIKEGSYFHNVDKMSPANVDLGL 240

Query: 241 KVILENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLK 300
           K +LE  D + K+L  K  EA  I++ATAS+FP+   TV    S SSS   MPMDE +L 
Sbjct: 241 KEVLEQHDISSKVLSIKFCEALEIVQATASNFPEQITTVHEMVSRSSSRITMPMDESILN 300

Query: 301 IVKRYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDG 360
           +VK+YGEKI+LK+SD+ P+ SK++GKR S +  +  EK+    + WQG PPWDLSLGGDG
Sbjct: 301 VVKKYGEKILLKDSDRKPKASKKRGKRQSPVDAIFKEKQSENSDAWQGPPPWDLSLGGDG 360

Query: 361 CPKFLCDVMV 365
           CPKFLCDVMV
Sbjct: 361 CPKFLCDVMV 369

[Close]

BLAST of Carg15054 vs. TrEMBL
Match: tr|A0A2I4GG06|A0A2I4GG06_9ROSI (Werner syndrome ATP-dependent helicase homolog isoform X2 OS=Juglans regia OX=51240 GN=LOC109007563 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.3e-119
Identity = 218/370 (58.92%), Postives = 270/370 (72.97%), Query Frame = 0


Query: 1   MDPPNGRPSFEIHIVSSVDSPDFGQLTRTLTRSKLIALDAEWKPLRSPNHSSFPRVSLLQ 60
           MD  N +P  +IH+V S DSP+F  LT +LTRS LIALDAEWKP+ +   S FP V+LLQ
Sbjct: 1   MDLRNQKP-LKIHLVCSTDSPEFTHLTESLTRSSLIALDAEWKPVHTGPQSYFPTVTLLQ 60

Query: 61  IACQF------HLDQPNDSVVFLLDLLSLPLSSVGDLLRDVFVSPHVLKLGFRFKQDLVN 120
           +AC+         D+  DS  FL+DL S+PLSS+ +LLRDVFVSP +LKLGFRFKQDL+ 
Sbjct: 61  LACELSPLLVSDPDELEDSATFLVDLTSIPLSSIWELLRDVFVSPDILKLGFRFKQDLIY 120

Query: 121 LSTTFCSYGGVSGLDRIEPFMDITSIYNHLHHKQYGRKMHKQAKSLAAICSEVLEFSLSK 180
           LS+TFC  G   G DR+EPF+DITS+YNHL HK +GRK+ KQ KSLA IC E+L  SLSK
Sbjct: 121 LSSTFCEQGCDPGFDRVEPFLDITSVYNHLQHKLHGRKVSKQIKSLATICKELLGLSLSK 180

Query: 181 ELQCSDWSYRPLTEEQIAYAAMDAHCLLEIFNIFYSKVLKEGDVLRNVSAVPSIEVNIGL 240
           ELQCSDWS RPLTEEQ  YAAMDAHCLL+IFN+F++K +KEG    NV  +    V++GL
Sbjct: 181 ELQCSDWSRRPLTEEQKTYAAMDAHCLLKIFNVFHAKTIKEGSYFHNVDKMSPANVDLGL 240

Query: 241 KVILENQDTNEKILRTKISEASYIIRATASDFPQSTATVRAHCSASSSINCMPMDEDLLK 300
           K +LE  D + K+L  K  EA  I++ATAS+FP+   TV    S SSS   MPMDE +L 
Sbjct: 241 KEVLEQHDISSKVLSIKFCEALEIVQATASNFPEQITTVHEMVSRSSSRITMPMDESILN 300

Query: 301 IVKRYGEKIILKESDKMPRTSKRKGKRSSTMKVVCSEKKILGVEDWQGQPPWDLSLGGDG 360
           +VK+YGEKI+LK+SD+ P+ SK++GKR S +  +  EK+    + WQG PPWDLSLGGDG
Sbjct: 301 VVKKYGEKILLKDSDRKPKASKKRGKRQSPVDAIFKEKQSENSDAWQGPPPWDLSLGGDG 360

Query: 361 CPKFLCDVMV 365
           CPKFLCDVMV
Sbjct: 361 CPKFLCDVMV 369

The following BLAST results are available for this feature:

BLAST of Carg15054 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923062.1	1.4e-205	99.18	exonuclease mut-7 homolog [Cucurbita moschata]	[more]
XP_023553430.1	2.5e-202	97.80	exonuclease mut-7 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022984501.1	1.8e-200	97.25	exonuclease mut-7 homolog [Cucurbita maxima]	[more]
XP_004146233.1	1.3e-163	81.20	PREDICTED: exonuclease mut-7 homolog [Cucumis sativus] >KGN57650.1 hypothetical ...	[more]
XP_022141215.1	1.3e-163	82.19	Werner syndrome ATP-dependent helicase homolog [Momordica charantia]	[more]

BLAST of Carg15054 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24340.1	9.9e-97	52.38	3'-5' exonuclease domain-containing protein	[more]
AT1G56310.1	7.8e-17	30.77	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32415.1	3.9e-08	28.33	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT5G35910.1	3.1e-05	25.76	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]

BLAST of Carg15054 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q179T2\|MUT7_AEDAE	2.6e-14	28.84	Exonuclease mut-7 homolog OS=Aedes aegypti OX=7159 GN=AAEL005527 PE=3 SV=1	[more]
sp\|Q8N9H8\|MUT7_HUMAN	5.9e-14	29.86	Exonuclease mut-7 homolog OS=Homo sapiens OX=9606 GN=EXD3 PE=1 SV=3	[more]
sp\|Q9VIF1\|MUT7_DROME	2.6e-09	27.54	Exonuclease mut-7 homolog OS=Drosophila melanogaster OX=7227 GN=Nbr PE=1 SV=1	[more]
sp\|A9LLI8\|RP6L3_ARATH	7.0e-07	28.33	Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1	[more]
sp\|P34607\|MUT7_CAEEL	1.0e-05	24.87	Exonuclease mut-7 OS=Caenorhabditis elegans OX=6239 GN=mut-7 PE=1 SV=1	[more]

BLAST of Carg15054 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6Q0\|A0A0A0L6Q0_CUCSA	8.7e-164	81.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238160 PE=4 SV=1	[more]
tr\|A0A1S3C2A3\|A0A1S3C2A3_CUCME	4.3e-163	80.60	exonuclease mut-7 homolog OS=Cucumis melo OX=3656 GN=LOC103496054 PE=4 SV=1	[more]
tr\|A0A2P4HGD8\|A0A2P4HGD8_QUESU	4.8e-122	62.47	Exonuclease mut-7 like OS=Quercus suber OX=58331 GN=CFP56_57229 PE=4 SV=1	[more]
tr\|A0A2I4GG00\|A0A2I4GG00_9ROSI	1.3e-119	58.92	uncharacterized protein LOC109007563 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4GG06\|A0A2I4GG06_9ROSI	1.3e-119	58.92	Werner syndrome ATP-dependent helicase homolog isoform X2 OS=Juglans regia OX=51...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008408	3'-5' exonuclease activity
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR036397	RNaseH_sf
IPR002562	3'-5'_exonuclease_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15054-RA	Carg15054-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 14..213 e-value: 1.5E-10 score: 51.0
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 23..212 e-value: 7.2E-20 score: 71.3
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 7..215 e-value: 5.8E-42 score: 145.1
None	No IPR available	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 1..365
None	No IPR available	PANTHER	PTHR12124:SF38	3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN	coord: 1..365
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 7..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15054	Cla004272	Watermelon (97103) v1	carwmB0990
Carg15054	Lsi05G001170	Bottle gourd (USVL1VR-Ls)	carlsiB904
Carg15054	Cla97C05G091410	Watermelon (97103) v2	carwmbB1042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15054	Silver-seed gourd	carcarB494
Carg15054	Silver-seed gourd	carcarB503
Carg15054	Cucumber (Gy14) v1	carcgyB1107
Carg15054	Cucumber (Gy14) v2	carcgybB0978
Carg15054	Cucumber (Gy14) v2	carcgybB0974
Carg15054	Cucumber (Gy14) v1	carcgyB1104
Carg15054	Cucurbita maxima (Rimu)	carcmaB1364
Carg15054	Cucurbita maxima (Rimu)	carcmaB1365
Carg15054	Cucurbita maxima (Rimu)	carcmaB1366
Carg15054	Cucurbita maxima (Rimu)	carcmaB1368
Carg15054	Cucurbita maxima (Rimu)	carcmaB1369
Carg15054	Cucurbita moschata (Rifu)	carcmoB1325
Carg15054	Cucurbita moschata (Rifu)	carcmoB1326
Carg15054	Cucurbita moschata (Rifu)	carcmoB1328
Carg15054	Cucurbita moschata (Rifu)	carcmoB1329
Carg15054	Cucurbita pepo (Zucchini)	carcpeB1373
Carg15054	Cucurbita pepo (Zucchini)	carcpeB1375
Carg15054	Cucurbita pepo (Zucchini)	carcpeB1376
Carg15054	Cucurbita pepo (Zucchini)	carcpeB1377
Carg15054	Wild cucumber (PI 183967)	carcpiB1029
Carg15054	Wild cucumber (PI 183967)	carcpiB1024
Carg15054	Cucumber (Chinese Long) v2	carcuB1001
Carg15054	Cucumber (Chinese Long) v2	carcuB1005
Carg15054	Cucumber (Chinese Long) v3	carcucB1030
Carg15054	Cucumber (Chinese Long) v3	carcucB1035
Carg15054	Bottle gourd (USVL1VR-Ls)	carlsiB902
Carg15054	Melon (DHL92) v3.5.1	carmeB0962
Carg15054	Melon (DHL92) v3.5.1	carmeB0966
Carg15054	Melon (DHL92) v3.6.1	carmedB0970
Carg15054	Melon (DHL92) v3.6.1	carmedB0976
Carg15054	Watermelon (Charleston Gray)	carwcgB0963
Carg15054	Watermelon (Charleston Gray)	carwcgB0964
Carg15054	Watermelon (Charleston Gray)	carwcgB0965
Carg15054	Watermelon (97103) v1	carwmB0991
Carg15054	Watermelon (97103) v2	carwmbB1040
Carg15054	Wax gourd	carwgoB1157
Carg15054	Wax gourd	carwgoB1160