Carg14898 (gene) Silver-seed gourd

Overview
NameCarg14898
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRING-H2 finger protein ATL52
LocationCucurbita_argyrosperma_scaffold_079 : 565129 .. 566070 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCTTACAAGGACTGTTCTTTAGAGATTTGCAGCATATACTGTCCTCAGTGGTGCTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGCGATTCCGCCACTGATTTCTCTCCTCTCATCATCGCCATCATTGGAATCTTGGCTAGCGCCTTCATTATGGTAAGCTACTACACCATCATCTCCAAATATTGCAGGAACAGAGCTGCTACCACCAACGCTGTCATGGAAATGGATGATGAAGAAAATCTTACCCAAATCCGCCATGAAAACCAGCTGCAAGCTCCTCCTCCTCCTACAGGCCTGGATCATGCTCTCATCGAGTCCATCACAGTCTGCAAGTATAAAAGAGGAGATGACTTAGTTGAAGGTACTGATTGCTCAGTTTGCCTGAGTGAGTTTCAAGAAAATGAGAGCTTAAGGTTGCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATTTCACCAACCAATCTTTCCCCACCCCCAACACAAGAAATTCTAAGAACAGAACACCTAAATGCATCTGCTCTTCAGTATCAACACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGTGAGGCAAGAAACTGCTGTTTCTGGGCTTGAGAATGATGATGCTTCTTCCAAGAATCGAAGGCAAAGTTTTGCATCAGATAGTCAAGACTCAGAGCCAAGAGACAGAATGAATCAAGTTCAGCCGTATAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGATGAGGTAGAGGAAGATGAATTATAA

mRNA sequence

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCTTACAAGGACTGTTCTTTAGAGATTTGCAGCATATACTGTCCTCAGTGGTGCTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGCGATTCCGCCACTGATTTCTCTCCTCTCATCATCGCCATCATTGGAATCTTGGCTAGCGCCTTCATTATGGTAAGCTACTACACCATCATCTCCAAATATTGCAGGAACAGAGCTGCTACCACCAACGCTGTCATGGAAATGGATGATGAAGAAAATCTTACCCAAATCCGCCATGAAAACCAGCTGCAAGCTCCTCCTCCTCCTACAGGCCTGGATCATGCTCTCATCGAGTCCATCACAGTCTGCAAGTATAAAAGAGGAGATGACTTAGTTGAAGGTACTGATTGCTCAGTTTGCCTGAGTGAGTTTCAAGAAAATGAGAGCTTAAGGTTGCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATTTCACCAACCAATCTTTCCCCACCCCCAACACAAGAAATTCTAAGAACAGAACACCTAAATGCATCTGCTCTTCAGTATCAACACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGTGAGGCAAGAAACTGCTGTTTCTGGGCTTGAGAATGATGATGCTTCTTCCAAGAATCGAAGGCAAAGTTTTGCATCAGATAGTCAAGACTCAGAGCCAAGAGACAGAATGAATCAAGTTCAGCCGTATAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGATGAGGTAGAGGAAGATGAATTATAA

Coding sequence (CDS)

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCTTACAAGGACTGTTCTTTAGAGATTTGCAGCATATACTGTCCTCAGTGGTGCTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGCGATTCCGCCACTGATTTCTCTCCTCTCATCATCGCCATCATTGGAATCTTGGCTAGCGCCTTCATTATGGTAAGCTACTACACCATCATCTCCAAATATTGCAGGAACAGAGCTGCTACCACCAACGCTGTCATGGAAATGGATGATGAAGAAAATCTTACCCAAATCCGCCATGAAAACCAGCTGCAAGCTCCTCCTCCTCCTACAGGCCTGGATCATGCTCTCATCGAGTCCATCACAGTCTGCAAGTATAAAAGAGGAGATGACTTAGTTGAAGGTACTGATTGCTCAGTTTGCCTGAGTGAGTTTCAAGAAAATGAGAGCTTAAGGTTGCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATTTCACCAACCAATCTTTCCCCACCCCCAACACAAGAAATTCTAAGAACAGAACACCTAAATGCATCTGCTCTTCAGTATCAACACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGTGAGGCAAGAAACTGCTGTTTCTGGGCTTGAGAATGATGATGCTTCTTCCAAGAATCGAAGGCAAAGTTTTGCATCAGATAGTCAAGACTCAGAGCCAAGAGACAGAATGAATCAAGTTCAGCCGTATAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGATGAGGTAGAGGAAGATGAATTATAA

Protein sequence

MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLNSLSWQGQVSVADILRASQDSEDEVEEDEL
Homology
[Close]
BLAST of Carg14898 vs. NCBI nr
Match: XP_022980342.1 (RING-H2 finger protein ATL52-like [Cucurbita maxima])

HSP 1 Score: 610.9 bits (1574), Expect = 2.4e-171
Identity = 305/313 (97.44%), Postives = 307/313 (98.08%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAY DCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYNDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDH 120
           IGILASAFIMVSYYTIISKYCRNRAATTNA MEMDDEENLT IRHENQLQA PPP GLDH
Sbjct: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAAMEMDDEENLTHIRHENQLQA-PPPAGLDH 120

Query: 121 ALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI+SITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240
           CPLCRSNISPTN+SPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA
Sbjct: 181 CPLCRSNISPTNVSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240

Query: 241 VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLNSLSWQGQVSVADILRA 300
           VSGLENDDASSKNRRQSFASD QDSEPRDRMNQVQPYRRSVSLNSLSWQGQVSVADILRA
Sbjct: 241 VSGLENDDASSKNRRQSFASDCQDSEPRDRMNQVQPYRRSVSLNSLSWQGQVSVADILRA 300

Query: 301 SQDSEDEVEEDEL 314
           SQDSEDEVEEDEL
Sbjct: 301 SQDSEDEVEEDEL 312

[Close]
BLAST of Carg14898 vs. NCBI nr
Match: XP_022924254.1 (RING-H2 finger protein ATL51-like [Cucurbita moschata])

HSP 1 Score: 560.5 bits (1443), Expect = 3.7e-156
Identity = 274/283 (96.82%), Postives = 279/283 (98.59%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGS+GDSATDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSHGDSATDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDH 120
           IGILASAFI+VSYYTIISKYCRNRAATTNAVMEMDDEENLTQI HENQLQAPPPP GLDH
Sbjct: 61  IGILASAFIVVSYYTIISKYCRNRAATTNAVMEMDDEENLTQILHENQLQAPPPPAGLDH 120

Query: 121 ALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI+SITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240
           CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA
Sbjct: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240

Query: 241 VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSL 284
           VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQV+PYRR V +
Sbjct: 241 VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVKPYRRVVRI 283

[Close]
BLAST of Carg14898 vs. NCBI nr
Match: XP_023527831.1 (RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.1 bits (1442), Expect = 4.9e-156
Identity = 274/283 (96.82%), Postives = 276/283 (97.53%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDH 120
           IGILASAFIMVSYYTIISKYCRNRAATTNA MEMDDEENLTQIRHENQLQAPPPP GLDH
Sbjct: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAAMEMDDEENLTQIRHENQLQAPPPPAGLDH 120

Query: 121 ALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI+SITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240
           CPLCRSNISPTNLSPPP QEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA
Sbjct: 181 CPLCRSNISPTNLSPPPAQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240

Query: 241 VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSL 284
           VSGLEN DASSKNRRQSFASD QDSEPRDRMNQVQPYRR V +
Sbjct: 241 VSGLENGDASSKNRRQSFASDCQDSEPRDRMNQVQPYRRVVRI 283

[Close]
BLAST of Carg14898 vs. NCBI nr
Match: XP_022147036.1 (RING-H2 finger protein ATL52-like [Momordica charantia])

HSP 1 Score: 555.1 bits (1429), Expect = 1.6e-154
Identity = 281/323 (87.00%), Postives = 295/323 (91.33%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYG+NGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGNNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDH 120
           IGILASAFI+VSYYTIISKYCRNRAATT+A MEMDDEENL QIRHENQLQA  PP GLD 
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATTSAAMEMDDEENLAQIRHENQLQA--PPAGLDE 120

Query: 121 ALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI+SITVCKY RGD LVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYIRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTVRQETA 240
           CPLCRSNISPTNL PPPTQEI RTEH+NA+ALQYQHR+NDTVVVVVVQDLQDLTV Q+TA
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQRTEHINAAALQYQHRSNDTVVVVVVQDLQDLTVSQQTA 240

Query: 241 VSGLENDDASSKNRRQSFASDSQDSEPRDRMNQ----------VQPYRRSVSLNSLSWQG 300
           V G+END ASSKN+RQSFAS SQDSEPRDRM Q          VQP+RRSVSL+S SWQG
Sbjct: 241 VLGIENDGASSKNQRQSFASVSQDSEPRDRMIQVREDDVVGDVVQPFRRSVSLDSFSWQG 300

Query: 301 QVSVADILRASQDSEDEVEEDEL 314
           QVSVADILR SQDSE+EVEEDE+
Sbjct: 301 QVSVADILRESQDSEEEVEEDEM 321

[Close]
BLAST of Carg14898 vs. NCBI nr
Match: XP_023540121.1 (RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550.4 bits (1417), Expect = 3.8e-153
Identity = 277/321 (86.29%), Postives = 292/321 (90.97%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDH 120
           IGILASAFI+VSYYTIISKYCRNRA T+N+ MEMDDEENL+QIRHENQLQAPPPP GLD 
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120

Query: 121 ALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI+SITVCKYKRGD LVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTV-RQET 240
           CPLCRSNISP NL PPPTQEI RTEHLN+   QYQHR+NDTVVVVVVQDL DLTV  QET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240

Query: 241 AVSGLENDDASSKNRRQSFASDSQDSEPRDRM-------NQVQPYRRSVSLNSLSWQGQV 300
           AV GLEND  SSKN+RQSF SD+QDSEPRD M       + VQP+RRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEDEVEEDEL 314
           SVADILRASQDSE+EVEEDEL
Sbjct: 301 SVADILRASQDSEEEVEEDEL 321

[Close]
BLAST of Carg14898 vs. TAIR10
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 2.5e-45
Identity = 122/323 (37.77%), Postives = 163/323 (50.46%), Query Frame = 0 

Query: 6   NSNQWQPY-AYKDCSLEICSIYCPQWCYII--FPPPPPFGYGSNGDSATDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+I                              
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 66  ILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDHAL 125
                    SYYT+ISKYC     T+++  E  +  +  +    +  +      GL+ ++
Sbjct: 64  XXXXXXXXXSYYTLISKYCHRHHQTSSS--ETLNLNHNGEGFFSSTQRISTNGDGLNESM 123

Query: 126 IESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCP 185
           I+SITV KYK GD  V+G+DCSVCLSEF+ENESLRLLPKC+HAFHLPCIDTWLKSHS CP
Sbjct: 124 IKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCP 183

Query: 186 LCRSNISPTNLSPPPTQEILR------------------TEHLNASALQYQHRTNDTVVV 245
           LCR+ ++  N    PT  + +                     +N +   Y+ +T D   V
Sbjct: 184 LCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLQDLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLN 305
           VV++DL+           G  N DA S+ +      +++D +         P RRSVSLN
Sbjct: 244 VVIEDLE----------IGSRNSDARSELQLPEERRETKDEDS-------LPIRRSVSLN 301

Query: 306 SLSWQGQVSVADILRASQDSEDE 308
           S      VS+AD+LR  +D E E
Sbjct: 304 S---GVVVSIADVLREIEDEEGE 301

[Close]
BLAST of Carg14898 vs. TAIR10
Match: AT4G17905.1 (RING/U-box superfamily protein)

HSP 1 Score: 166.8 bits (421), Expect = 2.2e-41
Identity = 91/209 (43.54%), Postives = 117/209 (55.98%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCYIIFPPPPPFGY----GSNGDSATDFSP 60
           M S  N + W  Y   +DC+  +CS +CPQWC  I   PPP  Y         S  + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPP- 120
           L+IAI GI A+AF++ +YYT++SKYC N   T  A  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PTGLDHALIESITVCKYKRGDD--LVEGTDCSVCLSEFQENESLRLLPKCSHAFH 180
                  GLD  LI+ I   K K+  +   + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSN-ISPTNLSP 196
           + CID WLKSHS CPLCR+  I PT   P
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKIIVPTTQQP 208

[Close]
BLAST of Carg14898 vs. TAIR10
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 117/325 (36.00%), Postives = 144/325 (44.31%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCYII--------------FPPPPPFGYG 60
           MGS GN N W     +Y+DCS  +CS+YCPQWCY+I                        
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SNGDSATDFSPLIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIR 120
                                                                       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 HENQLQAPPPPTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSH 180
                       GLD +LI+SITV KY++ D  VE +DCSVCLSEFQENESLRLLPKC+H
Sbjct: 121 XXXXXXXXXXXXGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPTNLSPPPTQEILRTEHLNASALQYQHRTNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S   +     Q+I+ TE+ + S       T D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TENNSIS-------TGDD 240

Query: 241 VVVVVVQDLQDLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSV 300
            VVVV  DL++   R ET      N+ ++ K        DS+D E           RRS 
Sbjct: 241 SVVVVNLDLENSRSRNETV-----NEGSTPKPPEM---QDSRDGEE----------RRSA 297

Query: 301 SLNSLSWQGQVSVADILRASQDSED 307
           SLN  S  G VS+ADILR  +D E+
Sbjct: 301 SLN--SGGGVVSIADILREIEDDEE 297

[Close]
BLAST of Carg14898 vs. TAIR10
Match: AT1G72220.1 (RING/U-box superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-33
Identity = 77/209 (36.84%), Postives = 111/209 (53.11%), Query Frame = 0 

Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGSNGDSATDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS++   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSXXXXXXXXXXXXAVYLPSQDSSSSLD 81

Query: 77  PLIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHE--NQLQAP 136
            + I  I     A ++  ++ +   +  +         + D+E+N T +  E  ++ Q  
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 137 PP-----PTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFH 196
            P      TGL  ++I SIT+C YKRGD L+E TDC VCL+EF+E+ESLRLLPKC+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201

[Close]
BLAST of Carg14898 vs. TAIR10
Match: AT5G10380.1 (RING/U-box superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 0 

Query: 114 PPTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDT 173
           P  GL  + I SITV  +K+G+ +++GT+CSVCL+EF+E+ESLRLLPKCSHAFHL CIDT
Sbjct: 106 PTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDT 165

Query: 174 WLKSHSTCPLCRSNISPTNLSPPPTQE 201
           WL SH  CPLCR+ +    ++ PP QE
Sbjct: 166 WLLSHKNCPLCRAPV--LLITEPPHQE 190

[Close]
BLAST of Carg14898 vs. Swiss-Prot
Match: sp|Q7XLY8|ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-56
Identity = 135/316 (42.72%), Postives = 175/316 (55.38%), Query Frame = 0 

Query: 10  WQPY-AYKDCSLEICSIYCPQWCYIIFPPPPPF---GYGSNGDSATDFSPLIIAIIGILA 69
           W PY   +DCS  +CS+YCPQWCY IFPPPPPF   G  ++  S   FSPL+IAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 70  SAFIMVSYYTIISKYCRNRAATTNAVMEMDD--------------EENLTQIRHENQLQA 129
           SAF++VSYYT ISKYC   ++    V                           HE+   +
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAXXXXXXXXXXXXXXXXXXXHESWNVS 127

Query: 130 PPPPTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCI 189
             PP+GLD  LI  ITVCKY+RGD  V  TDCSVCL EF + ESLRLLP+CSHAFH  CI
Sbjct: 128 --PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCI 187

Query: 190 DTWLKSHSTCPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQ 249
           DTWLKSHS CPLCR+NI+   +        L +      A       N   VVVV+  L+
Sbjct: 188 DTWLKSHSNCPLCRANITFVTVG-------LASPEPEGCAPGETGGDNTHEVVVVMDGLE 247

Query: 250 DLTVRQETAVS--GLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLNSLSWQ 306
           +L   Q+ AVS     +DD  +K+  +     +  +E R+   +  P +R  S   L   
Sbjct: 248 NLCEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIRE---EGSPPKRGASSFDLHRD 307

[Close]
BLAST of Carg14898 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.5e-44
Identity = 122/323 (37.77%), Postives = 163/323 (50.46%), Query Frame = 0 

Query: 6   NSNQWQPY-AYKDCSLEICSIYCPQWCYII--FPPPPPFGYGSNGDSATDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+I                              
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 66  ILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLDHAL 125
                    SYYT+ISKYC     T+++  E  +  +  +    +  +      GL+ ++
Sbjct: 64  XXXXXXXXXSYYTLISKYCHRHHQTSSS--ETLNLNHNGEGFFSSTQRISTNGDGLNESM 123

Query: 126 IESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCP 185
           I+SITV KYK GD  V+G+DCSVCLSEF+ENESLRLLPKC+HAFHLPCIDTWLKSHS CP
Sbjct: 124 IKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCP 183

Query: 186 LCRSNISPTNLSPPPTQEILR------------------TEHLNASALQYQHRTNDTVVV 245
           LCR+ ++  N    PT  + +                     +N +   Y+ +T D   V
Sbjct: 184 LCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLQDLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLN 305
           VV++DL+           G  N DA S+ +      +++D +         P RRSVSLN
Sbjct: 244 VVIEDLE----------IGSRNSDARSELQLPEERRETKDEDS-------LPIRRSVSLN 301

Query: 306 SLSWQGQVSVADILRASQDSEDE 308
           S      VS+AD+LR  +D E E
Sbjct: 304 S---GVVVSIADVLREIEDEEGE 301

[Close]
BLAST of Carg14898 vs. Swiss-Prot
Match: sp|P0C041|ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 3.9e-40
Identity = 91/209 (43.54%), Postives = 117/209 (55.98%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCYIIFPPPPPFGY----GSNGDSATDFSP 60
           M S  N + W  Y   +DC+  +CS +CPQWC  I   PPP  Y         S  + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPP- 120
           L+IAI GI A+AF++ +YYT++SKYC N   T  A  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PTGLDHALIESITVCKYKRGDD--LVEGTDCSVCLSEFQENESLRLLPKCSHAFH 180
                  GLD  LI+ I   K K+  +   + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSN-ISPTNLSP 196
           + CID WLKSHS CPLCR+  I PT   P
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKIIVPTTQQP 208

[Close]
BLAST of Carg14898 vs. Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-34
Identity = 117/325 (36.00%), Postives = 144/325 (44.31%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCYII--------------FPPPPPFGYG 60
           MGS GN N W     +Y+DCS  +CS+YCPQWCY+I                        
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SNGDSATDFSPLIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIR 120
                                                                       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 HENQLQAPPPPTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSH 180
                       GLD +LI+SITV KY++ D  VE +DCSVCLSEFQENESLRLLPKC+H
Sbjct: 121 XXXXXXXXXXXXGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPTNLSPPPTQEILRTEHLNASALQYQHRTNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S   +     Q+I+ TE+ + S       T D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TENNSIS-------TGDD 240

Query: 241 VVVVVVQDLQDLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSV 300
            VVVV  DL++   R ET      N+ ++ K        DS+D E           RRS 
Sbjct: 241 SVVVVNLDLENSRSRNETV-----NEGSTPKPPEM---QDSRDGEE----------RRSA 297

Query: 301 SLNSLSWQGQVSVADILRASQDSED 307
           SLN  S  G VS+ADILR  +D E+
Sbjct: 301 SLN--SGGGVVSIADILREIEDDEE 297

[Close]
BLAST of Carg14898 vs. Swiss-Prot
Match: sp|Q8LFY8|ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 6.7e-32
Identity = 77/209 (36.84%), Postives = 111/209 (53.11%), Query Frame = 0 

Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGSNGDSATDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS++   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSXXXXXXXXXXXXAVYLPSQDSSSSLD 81

Query: 77  PLIIAIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHE--NQLQAP 136
            + I  I     A ++  ++ +   +  +         + D+E+N T +  E  ++ Q  
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 137 PP-----PTGLDHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFH 196
            P      TGL  ++I SIT+C YKRGD L+E TDC VCL+EF+E+ESLRLLPKC+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201

[Close]
BLAST of Carg14898 vs. TrEMBL
Match: tr|A0A1S3AW58|A0A1S3AW58_CUCME (RING-H2 finger protein ATL52 OS=Cucumis melo OX=3656 GN=LOC103483448 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 3.9e-146
Identity = 273/328 (83.23%), Postives = 292/328 (89.02%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPP-PPTGLD 120
           IGILASAFI+VSYYTIISKYCRNRA+T+N  MEM+DEENL+QIRHENQLQAPP PP GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 HALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180
            ALI+SITVCKYKRGD LVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLSPPPTQEILRTEHLNASALQY--QHRTNDTVVVVVVQDLQDLT-VR 240
           TCPLCRSNISPTNL    TQEI +T+H  +SA QY  QHRTNDTV+VVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTATQEI-QTQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQ-----------VQPYRRSVSLNS 300
           QET VS LENDDASSKN+R+ +AS+SQ+S  R+RMNQ           VQP+RRSVSLNS
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERMNQVRQEYDVVDGVVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEDEVEEDEL 314
           LSWQG VSVADILR SQDSE+EVEEDEL
Sbjct: 301 LSWQGPVSVADILRVSQDSEEEVEEDEL 327

[Close]
BLAST of Carg14898 vs. TrEMBL
Match: tr|A0A0A0L405|A0A0A0L405_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 6.5e-141
Identity = 264/329 (80.24%), Postives = 282/329 (85.71%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPP-PPTGLD 120
           IGILASAFI+VSYYTIISKYCRNRA+T+N  MEM+DEEN++QIRHENQLQAPP PP GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 121 HALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180
            ALI+SITVCKYKRGD LVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLSPPPTQEILRTEHLNASALQYQ--HRTNDTVVVVVVQDLQDLT-VR 240
           TCPLCRSNISPTNL   PTQEI  T+H  +SA QYQ      DT+   VVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTPTQEIQTTQHFVSSAFQYQXXXXXXDTIXXXVVQDLDDLTVVR 240

Query: 241 QETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQ------------VQPYRRSVSLN 300
           QET  S LENDDASSKN+R+  A++SQ S  R+RMNQ            V+P+RRSVSLN
Sbjct: 241 QETVDSRLENDDASSKNQREGCAAESQISGARERMNQVRQEYDVVVDGVVEPFRRSVSLN 300

Query: 301 SLSWQGQVSVADILRASQDSEDEVEEDEL 314
           SLSWQGQVSVADILR SQDSE+E EEDEL
Sbjct: 301 SLSWQGQVSVADILRVSQDSEEEAEEDEL 329

[Close]
BLAST of Carg14898 vs. TrEMBL
Match: tr|A0A2N9IPG0|A0A2N9IPG0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53932 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.6e-81
Identity = 182/322 (56.52%), Postives = 210/322 (65.22%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY-AYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGD-SATDFSPLII 60
           MGS+ N N W PY  YKDCS  ICSIYCPQWCYII PPPPPFG G + D SA  FSPLI+
Sbjct: 1   MGSMNNPNSWSPYGTYKDCSQGICSIYCPQWCYIILPPPPPFGLGDDNDPSAFQFSPLIV 60

Query: 61  AIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGL 120
           A+IGILASAFI+V YYTIISKYCR R    N    M+   N   I HE+   A    +GL
Sbjct: 61  AVIGILASAFILVCYYTIISKYCRRRG---NGDTSMELNHNRDFINHESLQGA---SSGL 120

Query: 121 DHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSH 180
           D  LI+SI VCKYK+GD  VEGTDCSVCLSEFQENESLRLLPKC+HAFH+PCIDTWLKSH
Sbjct: 121 DETLIKSIKVCKYKKGDGSVEGTDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 180

Query: 181 STCPLCRSNI---SPTNLSPP--PTQEILRT-EHLNASALQYQHRTNDTVVVVVVQDLQD 240
           S+CPLCRSNI   + TN  PP  P   I  T    N SALQYQH  NDT  ++VVQDL+ 
Sbjct: 181 SSCPLCRSNINIVASTNSLPPQLPGNPIQETPPATNVSALQYQH-ANDT--ILVVQDLEG 240

Query: 241 LTVRQETAVSGLENDDASSKNRRQSFASDSQD-SEPRDRMNQ------VQPYRRSVSLNS 300
               +      +   D   K   Q+     +  S+ RD M +      +QP RRS+S+N 
Sbjct: 241 DAHEEAVVTLVISGHDVIPKTSIQAHGHGHRGISQTRDNMIEIRQDGVIQPLRRSLSMNY 300

Query: 301 LSWQGQVSVADILRASQDSEDE 308
              QG VS+ADILR   + EDE
Sbjct: 301 SLCQGNVSIADILREDDNDEDE 313

[Close]
BLAST of Carg14898 vs. TrEMBL
Match: tr|A0A2C9VGR7|A0A2C9VGR7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G157800 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.2e-78
Identity = 176/317 (55.52%), Postives = 212/317 (66.88%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY-AYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIA 60
           MGSVGN N W PY  YKDCS +ICSIYCPQWCY++F P        + DS TDFSPLIIA
Sbjct: 1   MGSVGNQNPWTPYDTYKDCSQQICSIYCPQWCYLLFSPXXXXFTLGDDDSGTDFSPLIIA 60

Query: 61  IIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGLD 120
           +IGILASAFI+VSYYTIISKYCR  +   N+   ++  EN  QI ++    +     GLD
Sbjct: 61  VIGILASAFILVSYYTIISKYCRRGSHDDNS---LELGENPDQISNQAWQGS---AAGLD 120

Query: 121 HALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180
            ALI+SITVCK+KRGD  VEG+DCSVCLSEFQENE+LRLLPKC+HAFHLPCIDTWLKSH+
Sbjct: 121 EALIKSITVCKFKRGDGFVEGSDCSVCLSEFQENETLRLLPKCNHAFHLPCIDTWLKSHA 180

Query: 181 TCPLCRSNISPTNLSP-----PPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLT 240
           +CPLCR+NI+PTN+ P                   SAL+YQHRTND   V+V+QDLQ   
Sbjct: 181 SCPLCRANIAPTNILPSXXXXXXXXXXXTPRRTAVSALEYQHRTND--AVLVIQDLQG-G 240

Query: 241 VRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRM----NQVQPYRRSVSLNSLSWQG 300
           VR+E+ VS L  DD   K    +F   +   EP D +      + P RRSVSLNS     
Sbjct: 241 VREESVVS-LVVDDTQPK---PTFHELNVRQEPEDLIEITEEAILPIRRSVSLNSSLCHD 300

Query: 301 QVSVADILRASQDSEDE 308
           QVS+ADIL   +D + +
Sbjct: 301 QVSIADILSIIEDEDGD 304

[Close]
BLAST of Carg14898 vs. TrEMBL
Match: tr|A0A2K1Y2G9|A0A2K1Y2G9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G073500v3 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.1e-77
Identity = 179/310 (57.74%), Postives = 204/310 (65.81%), Query Frame = 0 

Query: 1   MGS-VGNSNQWQPYA-YKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLII 60
           MGS  GN N W PY+ Y+DCS  ICSIYCPQ CYIIFP    F  G + DS TD SPLII
Sbjct: 1   MGSTTGNQNPWAPYSTYRDCSQGICSIYCPQRCYIIFPXXXXFTLGDD-DSNTDLSPLII 60

Query: 61  AIIGILASAFIMVSYYTIISKYCRNRAATTNAVMEMDDEENLTQIRHENQLQAPPPPTGL 120
           A+IGILASAFI+V+YYT+ISKYCR R     A    D  EN  Q+  E       P  GL
Sbjct: 61  AVIGILASAFILVTYYTLISKYCRRRGQGDGAT---DLNENHDQMASE--AWQGIPAGGL 120

Query: 121 DHALIESITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSH 180
           D AL++SITVCKYK+GD  VEGT+CSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSH
Sbjct: 121 DEALVKSITVCKYKKGDGFVEGTECSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSH 180

Query: 181 STCPLCRSNISPTNL-------SPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQ 240
           ++CPLCR+NI+P N+        P P QE L     N S LQYQH TND   V+V+QDL+
Sbjct: 181 ASCPLCRANIAPANILPSEAPAVPEPVQENL--PRTNVSTLQYQHGTND--AVLVIQDLE 240

Query: 241 DLTVRQETAVSGLENDDASSKNRRQSFASDSQDSEPRDRMNQVQPYRRSVSLNSLSWQGQ 300
             T RQE  VS +  DD       Q   S SQ        + +QP RRSVS +S S Q  
Sbjct: 241 GSTFRQEGVVSLVIGDDTPKTPVNQDLES-SQTGTELQISDPIQPLRRSVS-SSFS-QNH 297

Query: 301 VSVADILRAS 302
            S+ADILR S
Sbjct: 301 TSIADILRTS 297

The following BLAST results are available for this feature:
BLAST of Carg14898 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022980342.12.4e-17197.44RING-H2 finger protein ATL52-like [Cucurbita maxima][more]
XP_022924254.13.7e-15696.82RING-H2 finger protein ATL51-like [Cucurbita moschata][more]
XP_023527831.14.9e-15696.82RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo][more]
XP_022147036.11.6e-15487.00RING-H2 finger protein ATL52-like [Momordica charantia][more]
XP_023540121.13.8e-15386.29RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg14898 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17600.12.5e-4537.77RING/U-box superfamily protein[more]
AT4G17905.12.2e-4143.54RING/U-box superfamily protein[more]
AT3G03550.11.0e-3536.00RING/U-box superfamily protein[more]
AT1G72220.13.7e-3336.84RING/U-box superfamily protein[more]
AT5G10380.11.5e-2659.77RING/U-box superfamily protein[more]
BLAST of Carg14898 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7XLY8|ATL41_ORYSJ1.0e-5642.72E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q9LF64|ATL52_ARATH4.5e-4437.77RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
sp|P0C041|ATL53_ARATH3.9e-4043.54Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P... [more]
sp|Q9SRQ8|ATL51_ARATH1.9e-3436.00RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2[more]
sp|Q8LFY8|ATL54_ARATH6.7e-3236.84RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2[more]
BLAST of Carg14898 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AW58|A0A1S3AW58_CUCME3.9e-14683.23RING-H2 finger protein ATL52 OS=Cucumis melo OX=3656 GN=LOC103483448 PE=4 SV=1[more]
tr|A0A0A0L405|A0A0A0L405_CUCSA6.5e-14180.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE=4 SV=1[more]
tr|A0A2N9IPG0|A0A2N9IPG0_FAGSY7.6e-8156.52Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53932 PE=4 SV=1[more]
tr|A0A2C9VGR7|A0A2C9VGR7_MANES1.2e-7855.52Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G157800 PE=4 SV=... [more]
tr|A0A2K1Y2G9|A0A2K1Y2G9_POPTR5.1e-7757.74Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G073500v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14898-RACarg14898-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 143..184
e-value: 2.1E-7
score: 40.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 142..185
e-value: 9.3E-14
score: 51.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 143..185
score: 12.961
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..192
e-value: 1.2E-21
score: 77.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..273
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..245
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 1..245
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 142..185
e-value: 1.07735E-17
score: 73.8753
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 135..191

Synteny