Carg06317 (gene) Silver-seed gourd

Overview
NameCarg06317
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRING-H2 finger protein ATL52
LocationCucurbita_argyrosperma_scaffold_016 : 940974 .. 942089 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAAGTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCAATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAACGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAATAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGGTTGA

mRNA sequence

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAAGTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCAATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAACGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAATAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGGTTGA

Coding sequence (CDS)

ATGGGTTCTGTGGGAAACTCAAATCAATGGCAGCCATATGCATACAGGGACTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAGTGGTGTTACATCATCTTCCCACCACCTCCACCTTTTGGCTATGGAGCCAATAGCGATTCTGGCACTGATTTCTCCCCTCTTATCATAGCCATCATTGGAATCTTGGCCAGCGCCTTCATTTTGGTAAGCTACTACACCATCATCTCCAAGTATTGCAGGAACAGAGCTACCACCTCCAACTCCAACATGGAAATGGATGATGAAGAAAATCTTTCTCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCCTCCTCCGGCAGGCCTGGATGAGGCTCTCATCAAGTCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACAGATTGCTCAGTTTGTTTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGGCTTCTGCCAAAGTGCAGCCATGCCTTTCATCTTCCTTGTATTGACACATGGCTCAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAACATCTCACCAATCAATCTTTTCCCACCCCCAACTCAGGAAATTCAAAGAACAGAACATTTAAATTCATATAATTTTCAGTATCAGCACAGAAGCAATGACACAGTAGTTGTTGTGGTGGTTCAAGATTTGCCGGATTTAACAGTCAGCAGCCAAGAAACTGCTGTTTTGGGGCTTGAAAACGATGGTGTTTCTTCCAAGAATCAAAGGCAAAGTTTTGTATCAGATAATCAAGATTCAGAGCCGAGAGACATCATGATTCATCAAATAAGACAAGATGATGCTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATACTGAGAGCCAGTCAAGATAGCGAGGAAGAGGTAGAAGAAGATGAATTACAAATGGGGATTGGATCTTCAAAAGCATTTGTTCAAGAGGATTGCCATTCCAGAGTTTCCAACTTGGAAATGCATAGATCTATCTCAACTGGGAAGCTGGGTTTTACAAATTATGGGAATTGGAAAGGGAAGAGTTGCATCATTCCCGGTTGA

Protein sequence

MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYGNWKGKSCIIPG
Homology
[Close]
BLAST of Carg06317 vs. NCBI nr
Match: XP_023540121.1 (RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 751.9 bits (1940), Expect = 1.0e-213
Identity = 369/370 (99.73%), Postives = 369/370 (99.73%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYG NSDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300
           AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG
Sbjct: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360

Query: 361 NWKGKSCIIP 371
           NWKGKSCIIP
Sbjct: 361 NWKGKSCIIP 370

[Close]
BLAST of Carg06317 vs. NCBI nr
Match: XP_022946171.1 (RING-H2 finger protein ATL51-like [Cucurbita moschata])

HSP 1 Score: 749.6 bits (1934), Expect = 5.1e-213
Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALI SITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALINSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300
           AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQ RQDDAVQPFRRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQTRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG
Sbjct: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360

Query: 361 NWKGKSCIIP 371
           NWKGKSCIIP
Sbjct: 361 NWKGKSCIIP 370

[Close]
BLAST of Carg06317 vs. NCBI nr
Match: XP_022974726.1 (RING-H2 finger protein ATL51-like [Cucurbita maxima])

HSP 1 Score: 743.4 bits (1918), Expect = 3.7e-211
Identity = 365/371 (98.38%), Postives = 367/371 (98.92%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYG NSDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRA TSNSNMEMDDEENLSQIRHENQLQAP PPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATSNSNMEMDDEENLSQIRHENQLQAPLPPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDL VSSQET
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLPVSSQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300
           AVLGLENDGVSSKNQRQSFVSDNQDSEPR+IMIHQ+RQDDAVQPFRRSVSLNSLSWQGQV
Sbjct: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRNIMIHQVRQDDAVQPFRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG
Sbjct: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360

Query: 361 NWKGKSCIIPG 372
           NWKGKSCIIPG
Sbjct: 361 NWKGKSCIIPG 371

[Close]
BLAST of Carg06317 vs. NCBI nr
Match: XP_022147036.1 (RING-H2 finger protein ATL52-like [Momordica charantia])

HSP 1 Score: 625.5 bits (1612), Expect = 1.1e-175
Identity = 322/378 (85.19%), Postives = 340/378 (89.95%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG N DSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGNNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFILVSYYTIISKYCRNRA T+++ MEMDDEENL+QIRHENQLQA  PPAGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATTSAAMEMDDEENLAQIRHENQLQA--PPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKY RGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYIRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISP NLFPPPTQEIQRTEH+N+   QYQHRSNDTVVVVVVQDL DLTV SQ+T
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQRTEHINAAALQYQHRSNDTVVVVVVQDLQDLTV-SQQT 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQD----DAVQPFRRSVSLNSLSW 300
           AVLG+ENDG SSKNQRQSF S +QDSEPRD MI Q+R+D    D VQPFRRSVSL+S SW
Sbjct: 241 AVLGIENDGASSKNQRQSFASVSQDSEPRDRMI-QVREDDVVGDVVQPFRRSVSLDSFSW 300

Query: 301 QGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSR----VSNLEMHRSISTG 360
           QGQVSVADILR SQDSEEEVEEDE+QMGIGSSK FVQE   S     VSNL M+RS+STG
Sbjct: 301 QGQVSVADILRESQDSEEEVEEDEMQMGIGSSKVFVQEHFQSNHKNGVSNLGMNRSVSTG 360

Query: 361 KLGFTNYGNWKGKSCIIP 371
           +LGFTNY   KGKSCIIP
Sbjct: 361 RLGFTNYE--KGKSCIIP 372

[Close]
BLAST of Carg06317 vs. NCBI nr
Match: XP_022980342.1 (RING-H2 finger protein ATL52-like [Cucurbita maxima])

HSP 1 Score: 609.0 bits (1569), Expect = 1.1e-170
Identity = 312/370 (84.32%), Postives = 327/370 (88.38%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYNDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120
           IGILASAFI+VSYYTIISKYCRNRA T+N+ MEMDDEENL+ IRHENQLQA PPPAGLD 
Sbjct: 61  IGILASAFIMVSYYTIISKYCRNRAATTNAAMEMDDEENLTHIRHENQLQA-PPPAGLDH 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGD LVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDDLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQET 240
           CPLCRSNISP N+ PPPTQEI RTEHLN+   QYQHR+NDTVVVVVVQDL DLTV  QET
Sbjct: 181 CPLCRSNISPTNVSPPPTQEILRTEHLNASALQYQHRTNDTVVVVVVQDLQDLTV-RQET 240

Query: 241 AVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQV 300
           AV GLEND  SSKN+RQSF SD QDSEPRD M       + VQP+RRSVSLNSLSWQGQV
Sbjct: 241 AVSGLENDDASSKNRRQSFASDCQDSEPRDRM-------NQVQPYRRSVSLNSLSWQGQV 300

Query: 301 SVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSISTGKLGFTNYG 360
           SVADILRASQDSE+EVEEDELQMGIGSSK F QE CH    +L M+RSISTGK GFTNYG
Sbjct: 301 SVADILRASQDSEDEVEEDELQMGIGSSKLFTQEHCH----DLGMNRSISTGKQGFTNYG 355

Query: 361 NWKGKSCIIP 371
             KGKSCIIP
Sbjct: 361 --KGKSCIIP 355

[Close]
BLAST of Carg06317 vs. TAIR10
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-49
Identity = 139/393 (35.37%), Postives = 191/393 (48.60%), Query Frame = 0 

Query: 6   NSNQWQPY-AYRDCSLEICSIYCPQWCYII--FPPPPPFGYGANSDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+I                              
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 66  ILASAFILVSYYTIISKYCRNRATTSNS---NMEMDDEENLSQIRHENQLQAPPPPAGLD 125
                    SYYT+ISKYC     TS+S   N+  + E   S  +     +      GL+
Sbjct: 64  XXXXXXXXXSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQ-----RISTNGDGLN 123

Query: 126 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 185
           E++IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS
Sbjct: 124 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 183

Query: 186 TCPLCRSNISPIN------------LFPPPTQEIQRTEHLNSYNFQ---YQHRSNDTVVV 245
            CPLCR+ ++ +N            +    +    +T  ++  N     Y+ ++ D   V
Sbjct: 184 NCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQP 305
           VV++DL            +G  N    S+ Q      + ++++  D +           P
Sbjct: 244 VVIEDLE-----------IGSRNSDARSELQ---LPEERRETKDEDSL-----------P 303

Query: 306 FRRSVSLNSLSWQGQVSVADILRASQDSEEE-----VEEDELQMGIGSSKAFVQEDCHSR 365
            RRSVSLNS      VS+AD+LR  +D E E       +   +   G  K     + + R
Sbjct: 304 IRRSVSLNS---GVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQR 361

Query: 366 VSNLE--MHRSISTGKLGFTNYGNWKGKSCIIP 371
              +     RS+STG+  F+ Y   +G++  +P
Sbjct: 364 SGGVSGFFVRSLSTGRFIFSRYD--RGRNYRLP 361

[Close]
BLAST of Carg06317 vs. TAIR10
Match: AT4G17905.1 (RING/U-box superfamily protein)

HSP 1 Score: 172.6 bits (436), Expect = 4.7e-43
Identity = 92/201 (45.77%), Postives = 118/201 (58.71%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAY-RDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGT----DFSP 60
           M S  N + W  Y   RDC+  +CS +CPQWC  I   PPP  Y    + G     + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPP- 120
           L+IAI GI A+AF+L +YYT++SKYC N  TT+ +  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PAGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                 AGLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]
BLAST of Carg06317 vs. TAIR10
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37
Identity = 125/348 (35.92%), Postives = 156/348 (44.83%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY--AYRDCSLEICSIYCPQWCYII--------------FPPPPPFGYG 60
           MGS GN N W     +YRDCS  +CS+YCPQWCY+I                        
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ANSDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIR 120
                                                                       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 HENQLQAPPPPAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
                       GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 XXXXXXXXXXXXGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S + +     Q+I  TE+ NS +      + D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TEN-NSIS------TGDD 240

Query: 241 VVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDA 300
            VVVV  DL + + S  ET      N+G + K      + D++D E              
Sbjct: 241 SVVVVNLDLEN-SRSRNETV-----NEGSTPKPPE---MQDSRDGEE------------- 300

Query: 301 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSK 330
               RRS SLN  S  G VS+ADILR       E+E+DE   G+G+S+
Sbjct: 301 ----RRSASLN--SGGGVVSIADILR-------EIEDDEESAGVGTSR 305

[Close]
BLAST of Carg06317 vs. TAIR10
Match: AT1G72220.1 (RING/U-box superfamily protein)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-34
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 0 

Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGANSDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSXXXXXXXXXXXXAVYLPSQDSSSSLD 81

Query: 77  PLII-----AIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQL 136
            + I     A++ IL + F LV+ +   S    N+ T  + N   +D + + +   +++ 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDN---EDNDTVMEEEFQDRE 141

Query: 137 QAPPP-----PAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 196
           Q   P       GL +++I SIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+H
Sbjct: 142 QVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

[Close]
BLAST of Carg06317 vs. TAIR10
Match: AT5G10380.1 (RING/U-box superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 114 PPAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDT 173
           P  GL  + I SITV  +K+G+G+++GT+CSVCL+EFEE+ESLRLLPKCSHAFHL CIDT
Sbjct: 106 PTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDT 165

Query: 174 WLKSHSTCPLCRSNISPINLFPPPTQEIQRTEH 207
           WL SH  CPLCR   +P+ L   P  +   T H
Sbjct: 166 WLLSHKNCPLCR---APVLLITEPPHQETETNH 195

[Close]
BLAST of Carg06317 vs. Swiss-Prot
Match: sp|Q7XLY8|ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 6.4e-58
Identity = 149/353 (42.21%), Postives = 187/353 (52.97%), Query Frame = 0 

Query: 10  WQPY-AYRDCSLEICSIYCPQWCYIIFPPPPPF---GYGANSDSGTDFSPLIIAIIGILA 69
           W PY   RDCS  +CS+YCPQWCY IFPPPPPF   G  A+  SG  FSPL+IAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 70  SAFILVSYYTIISKYC------RNRATTSNSN--------MEMDDEENLSQIRHENQLQA 129
           SAF+LVSYYT ISKYC      R R   S+S                      HE+   +
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAXXXXXXXXXXXXXXXXXXXHESWNVS 127

Query: 130 PPPPAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCI 189
             PP+GLDE LI  ITVCKY+RGDG V  TDCSVCL EF + ESLRLLP+CSHAFH  CI
Sbjct: 128 --PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCI 187

Query: 190 DTWLKSHSTCPLCRSNIS--PINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQD 249
           DTWLKSHS CPLCR+NI+   + L  P  +     E             N   VVVV+  
Sbjct: 188 DTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGE---------TGGDNTHEVVVVMDG 247

Query: 250 LPDLTVSSQE-TAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRS 309
           L +L    QE  +     +D   +K+  +     N  +E        IR++ +  P +R 
Sbjct: 248 LENLCEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAE--------IREEGS--PPKRG 307

Query: 310 VSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVS 342
            S   L    ++ +AD+L+ S + E     +    G+ +  A     CH   S
Sbjct: 308 ASSFDLHRDNRMCIADVLQESMEDELTAARES---GLLAGGAGTSRRCHGENS 336

[Close]
BLAST of Carg06317 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.9e-48
Identity = 139/393 (35.37%), Postives = 191/393 (48.60%), Query Frame = 0 

Query: 6   NSNQWQPY-AYRDCSLEICSIYCPQWCYII--FPPPPPFGYGANSDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+I                              
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63

Query: 66  ILASAFILVSYYTIISKYCRNRATTSNS---NMEMDDEENLSQIRHENQLQAPPPPAGLD 125
                    SYYT+ISKYC     TS+S   N+  + E   S  +     +      GL+
Sbjct: 64  XXXXXXXXXSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQ-----RISTNGDGLN 123

Query: 126 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 185
           E++IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS
Sbjct: 124 ESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHS 183

Query: 186 TCPLCRSNISPIN------------LFPPPTQEIQRTEHLNSYNFQ---YQHRSNDTVVV 245
            CPLCR+ ++ +N            +    +    +T  ++  N     Y+ ++ D   V
Sbjct: 184 NCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQP 305
           VV++DL            +G  N    S+ Q      + ++++  D +           P
Sbjct: 244 VVIEDLE-----------IGSRNSDARSELQ---LPEERRETKDEDSL-----------P 303

Query: 306 FRRSVSLNSLSWQGQVSVADILRASQDSEEE-----VEEDELQMGIGSSKAFVQEDCHSR 365
            RRSVSLNS      VS+AD+LR  +D E E       +   +   G  K     + + R
Sbjct: 304 IRRSVSLNS---GVVVSIADVLREIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQR 361

Query: 366 VSNLE--MHRSISTGKLGFTNYGNWKGKSCIIP 371
              +     RS+STG+  F+ Y   +G++  +P
Sbjct: 364 SGGVSGFFVRSLSTGRFIFSRYD--RGRNYRLP 361

[Close]
BLAST of Carg06317 vs. Swiss-Prot
Match: sp|P0C041|ATL53_ARATH (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 8.4e-42
Identity = 92/201 (45.77%), Postives = 118/201 (58.71%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAY-RDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGT----DFSP 60
           M S  N + W  Y   RDC+  +CS +CPQWC  I   PPP  Y    + G     + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPP- 120
           L+IAI GI A+AF+L +YYT++SKYC N  TT+ +  E    + +  +    +     P 
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 -----PAGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                 AGLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]
BLAST of Carg06317 vs. Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-36
Identity = 125/348 (35.92%), Postives = 156/348 (44.83%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY--AYRDCSLEICSIYCPQWCYII--------------FPPPPPFGYG 60
           MGS GN N W     +YRDCS  +CS+YCPQWCY+I                        
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  ANSDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIR 120
                                                                       
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 HENQLQAPPPPAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
                       GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 XXXXXXXXXXXXGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDT 240
           AFH+PCIDTWLKSHS CPLCR+ I   S + +     Q+I  TE+ NS +      + D 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIV-TEN-NSIS------TGDD 240

Query: 241 VVVVVVQDLPDLTVSSQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDA 300
            VVVV  DL + + S  ET      N+G + K      + D++D E              
Sbjct: 241 SVVVVNLDLEN-SRSRNETV-----NEGSTPKPPE---MQDSRDGEE------------- 300

Query: 301 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSK 330
               RRS SLN  S  G VS+ADILR       E+E+DE   G+G+S+
Sbjct: 301 ----RRSASLN--SGGGVVSIADILR-------EIEDDEESAGVGTSR 305

[Close]
BLAST of Carg06317 vs. Swiss-Prot
Match: sp|Q8LFY8|ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.9e-33
Identity = 83/212 (39.15%), Postives = 116/212 (54.72%), Query Frame = 0 

Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGANSDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSXXXXXXXXXXXXAVYLPSQDSSSSLD 81

Query: 77  PLII-----AIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQL 136
            + I     A++ IL + F LV+ +   S    N+ T  + N   +D + + +   +++ 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDN---EDNDTVMEEEFQDRE 141

Query: 137 QAPPP-----PAGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 196
           Q   P       GL +++I SIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+H
Sbjct: 142 QVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNH 201

[Close]
BLAST of Carg06317 vs. TrEMBL
Match: tr|A0A1S3AW58|A0A1S3AW58_CUCME (RING-H2 finger protein ATL52 OS=Cucumis melo OX=3656 GN=LOC103483448 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 8.2e-167
Identity = 312/383 (81.46%), Postives = 333/383 (86.95%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPP-PPAGLD 120
           IGILASAFILVSYYTIISKYCRNRA+TSN  MEM+DEENLSQIRHENQLQAPP PP GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPINLFPPPTQEIQRTEHL--NSYNFQYQHRSNDTVVVVVVQDLPDLTVSS 240
           TCPLCRSNISP NLF   TQEIQ T+H   +++ +Q+QHR+NDTV+VVVVQDL DLTV  
Sbjct: 181 TCPLCRSNISPTNLFSTATQEIQ-TQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQ-----DDAVQPFRRSVSLN 300
           QET V  LEND  SSKNQR+ + S++Q+S  R+ M +Q+RQ     D  VQPFRRSVSLN
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERM-NQVRQEYDVVDGVVQPFRRSVSLN 300

Query: 301 SLSWQGQVSVADILRASQDSEEEVEEDEL-QMGIGSSKAFVQEDCHSR----VSNLEMHR 360
           SLSWQG VSVADILR SQDSEEEVEEDEL QMGIGSSK FVQE  HS     VSNL M+R
Sbjct: 301 SLSWQGPVSVADILRVSQDSEEEVEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNR 360

Query: 361 SISTGKLGFTNYGNWKGKSCIIP 371
           SISTGKLGFTNYG  KGKSCIIP
Sbjct: 361 SISTGKLGFTNYG--KGKSCIIP 379

[Close]
BLAST of Carg06317 vs. TrEMBL
Match: tr|A0A0A0L405|A0A0A0L405_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 8.7e-161
Identity = 304/383 (79.37%), Postives = 321/383 (83.81%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPP-PPAGLD 120
           IGILASAFILVSYYTIISKYCRNRA+TSN  MEM+DEEN+SQIRHENQLQAPP PP GLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQ--HRSNDTVVVVVVQDLPDLTVSS 240
           TCPLCRSNISP NLF  PTQEIQ T+H  S  FQYQ      DT+   VVQDL DLTV  
Sbjct: 181 TCPLCRSNISPTNLFSTPTQEIQTTQHFVSSAFQYQXXXXXXDTIXXXVVQDLDDLTVVR 240

Query: 241 QETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQ------DDAVQPFRRSVSL 300
           QET    LEND  SSKNQR+   +++Q S  R+ M +Q+RQ      D  V+PFRRSVSL
Sbjct: 241 QETVDSRLENDDASSKNQREGCAAESQISGARERM-NQVRQEYDVVVDGVVEPFRRSVSL 300

Query: 301 NSLSWQGQVSVADILRASQDSEEEVEEDEL-QMGIGSSKAFVQEDCHSR----VSNLEMH 360
           NSLSWQGQVSVADILR SQDSEEE EEDEL QMGIGSSK FVQE  HS     VSNL M+
Sbjct: 301 NSLSWQGQVSVADILRVSQDSEEEAEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMN 360

Query: 361 RSISTGKLGFTNYGNWKGKSCII 370
           RSISTGKLGFTNYG  KGKSCII
Sbjct: 361 RSISTGKLGFTNYG--KGKSCII 380

[Close]
BLAST of Carg06317 vs. TrEMBL
Match: tr|A0A2N9IPG0|A0A2N9IPG0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53932 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-91
Identity = 207/381 (54.33%), Postives = 251/381 (65.88%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY-AYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSD-SGTDFSPLII 60
           MGS+ N N W PY  Y+DCS  ICSIYCPQWCYII PPPPPFG G ++D S   FSPLI+
Sbjct: 1   MGSMNNPNSWSPYGTYKDCSQGICSIYCPQWCYIILPPPPPFGLGDDNDPSAFQFSPLIV 60

Query: 61  AIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGL 120
           A+IGILASAFILV YYTIISKYCR R    N +  M+   N   I HE+   A    +GL
Sbjct: 61  AVIGILASAFILVCYYTIISKYCRRR---GNGDTSMELNHNRDFINHESLQGA---SSGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSH 180
           DE LIKSI VCKYK+GDG VEGTDCSVCLSEF+ENESLRLLPKC+HAFH+PCIDTWLKSH
Sbjct: 121 DETLIKSIKVCKYKKGDGSVEGTDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 180

Query: 181 STCPLCRSNISPI---NLFPP--PTQEIQRTEHLNSYN-FQYQHRSNDTVVVVVVQDLPD 240
           S+CPLCRSNI+ +   N  PP  P   IQ T    + +  QYQH +NDT++VV      D
Sbjct: 181 SSCPLCRSNINIVASTNSLPPQLPGNPIQETPPATNVSALQYQH-ANDTILVV-----QD 240

Query: 241 LTVSSQETAVLGLENDG--VSSKNQRQSFVSDNQD-SEPRDIMIHQIRQDDAVQPFRRSV 300
           L   + E AV+ L   G  V  K   Q+    ++  S+ RD MI +IRQD  +QP RRS+
Sbjct: 241 LEGDAHEEAVVTLVISGHDVIPKTSIQAHGHGHRGISQTRDNMI-EIRQDGVIQPLRRSL 300

Query: 301 SLNSLSWQGQVSVADILRASQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSNLEMHRSI 360
           S+N    QG VS+ADILR   + E+E    E+ + IG+S+   +  C +      M RSI
Sbjct: 301 SMNYSLCQGNVSIADILREDDNDEDEEYTMEI-LDIGTSRGLEEIQCKAN-DRKGMKRSI 360

Query: 361 STGKLGFTNYGNWKGKSCIIP 371
           STG+  FT YG  KG + +IP
Sbjct: 361 STGRFMFTRYG--KGSNSVIP 364

[Close]
BLAST of Carg06317 vs. TrEMBL
Match: tr|A0A2R6RAK7|A0A2R6RAK7_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09382 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.7e-84
Identity = 187/378 (49.47%), Postives = 236/378 (62.43%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY-AYRDCSLEICSIYCPQWCYIIFPPPPPFGYGANSDSGTDFSPLIIA 60
           MGS+G+ N W PY  YRDCS  ICSIYCPQWCYIIF              GT+FSPLIIA
Sbjct: 1   MGSIGSPNSWAPYDTYRDCSQGICSIYCPQWCYIIF--XXXXXXXXXXXXGTNFSPLIIA 60

Query: 61  IIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLD 120
           +IGILASAF+LV+YYTII+KYC  R   +N ++  + E N SQ+ H+   Q   PPAGLD
Sbjct: 61  VIGILASAFLLVAYYTIIAKYCGRRG--ANESLTTEFEANQSQLNHD---QWQVPPAGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           E+LIKSIT+C+Y+RGDGLVEGT+C+VCLSEF ++ESLRLLPKC+HAFHLPCIDTWLKSHS
Sbjct: 121 ESLIKSITICQYRRGDGLVEGTECAVCLSEFIDDESLRLLPKCNHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQE 240
            CPLCR+N+  IN  PPP Q  Q    LN  + + Q R ND ++VV      D      E
Sbjct: 181 NCPLCRANVVSINPLPPPPQSTQNLSTLNVSSLEIQSR-NDLILVV-----DDSQRGHTE 240

Query: 241 TAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSWQGQ 300
             V+ L++D  S KN +                       + +Q FRRS+SL S   + +
Sbjct: 241 EVVVSLDSD-CSPKNSQ-----------------------EGLQQFRRSISLGSFPSKRR 300

Query: 301 VSVADILRASQ-----DSEEEVEEDELQMGIGSSKAFVQEDCHSRVSN--LEMHRSISTG 360
           + V+DIL  S+     + E+E E  +   G+GSS+ F  E       N  LEM RS+STG
Sbjct: 301 LLVSDILHISEYDEDWEREKEREIHQSSTGVGSSRGFGGEKGFPNDGNEVLEMKRSVSTG 339

Query: 361 KLGFTNYGNWKGKSCIIP 371
           +  FT +   KGK+CIIP
Sbjct: 361 RFTFTRHD--KGKNCIIP 339

[Close]
BLAST of Carg06317 vs. TrEMBL
Match: tr|M5X0D2|M5X0D2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa007682mg PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 199/391 (50.90%), Postives = 238/391 (60.87%), Query Frame = 0 

Query: 1   MGSVGNSNQWQPY-AYRDCSLEICSIYCPQWCYIIFPPPPPFGYGA---NSDSGTDFSPL 60
           MGS GN N W PY  Y+DCS  ICSIYCPQWCYI+ PPPPPF +     + DS TDFSPL
Sbjct: 1   MGSSGNQNPWAPYDNYKDCSQGICSIYCPQWCYILGPPPPPFDFAEADDSKDSATDFSPL 60

Query: 61  IIAIIGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPA 120
           IIA+IGI ASAFILV+YYTIISKYCR R      +++M++  N +QI    Q        
Sbjct: 61  IIAVIGIFASAFILVTYYTIISKYCRRRDNDGGRDIDMEN-SNPNQISESWQ----GSTT 120

Query: 121 GLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLK 180
           GLDE+LIKSI V KYKRGD LVEGTDCSVCLSEFEENESLRLLPKCSHAFH+PCIDTW K
Sbjct: 121 GLDESLIKSIKVHKYKRGDSLVEGTDCSVCLSEFEENESLRLLPKCSHAFHVPCIDTWFK 180

Query: 181 SHSTCPLCRSNISPINLFPPPTQEIQRTEHLNSYNFQYQHRSNDTVVVVVVQDLPDLTVS 240
           SHS+CPLCRSNI+   +   P QE   T        +YQHRS+ +  V+VVQDL +    
Sbjct: 181 SHSSCPLCRSNIAAPAIALNPQQEQNVTAS------EYQHRSHAS--VLVVQDLEE---- 240

Query: 241 SQETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQDDAVQPFRRSVSLNSLSW 300
                V+ L ND V  K   Q  V +    E   +   +I Q D +Q  RRS SLN    
Sbjct: 241 -----VVSLANDHVVPKTTTQDIVRERAHLE-NTVNSCEIEQ-DGIQQLRRSASLNC--- 300

Query: 301 QGQVSVADILRA-----SQDSEEEVEEDELQMGIGSSKAFVQEDCHSRVSN--------- 360
              VS+AD+L        +D E ++E  +  MGIGSS   V E+ +S+  N         
Sbjct: 301 ---VSIADVLHLHDCEDDEDLENQMENVQFSMGIGSSNR-VAEEQNSKSDNHRSGVFSLV 358

Query: 361 ---LEMHRSISTGKLGFTNYGNWKGKSCIIP 371
              L + RS STG+  FT YG  K K+ I P
Sbjct: 361 KGPLVLKRSTSTGRFVFTRYG--KEKNSITP 358

The following BLAST results are available for this feature:
BLAST of Carg06317 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023540121.11.0e-21399.73RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo][more]
XP_022946171.15.1e-21399.46RING-H2 finger protein ATL51-like [Cucurbita moschata][more]
XP_022974726.13.7e-21198.38RING-H2 finger protein ATL51-like [Cucurbita maxima][more]
XP_022147036.11.1e-17585.19RING-H2 finger protein ATL52-like [Momordica charantia][more]
XP_022980342.11.1e-17084.32RING-H2 finger protein ATL52-like [Cucurbita maxima][more]
BLAST of Carg06317 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17600.14.4e-4935.37RING/U-box superfamily protein[more]
AT4G17905.14.7e-4345.77RING/U-box superfamily protein[more]
AT3G03550.12.9e-3735.92RING/U-box superfamily protein[more]
AT1G72220.11.0e-3439.15RING/U-box superfamily protein[more]
AT5G10380.12.5e-2859.14RING/U-box superfamily protein[more]
BLAST of Carg06317 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q7XLY8|ATL41_ORYSJ6.4e-5842.21E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994... [more]
sp|Q9LF64|ATL52_ARATH7.9e-4835.37RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1[more]
sp|P0C041|ATL53_ARATH8.4e-4245.77Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P... [more]
sp|Q9SRQ8|ATL51_ARATH5.3e-3635.92RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2[more]
sp|Q8LFY8|ATL54_ARATH1.9e-3339.15RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2[more]
BLAST of Carg06317 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AW58|A0A1S3AW58_CUCME8.2e-16781.46RING-H2 finger protein ATL52 OS=Cucumis melo OX=3656 GN=LOC103483448 PE=4 SV=1[more]
tr|A0A0A0L405|A0A0A0L405_CUCSA8.7e-16179.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE=4 SV=1[more]
tr|A0A2N9IPG0|A0A2N9IPG0_FAGSY1.1e-9154.33Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53932 PE=4 SV=1[more]
tr|A0A2R6RAK7|A0A2R6RAK7_ACTCH8.7e-8449.47RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00... [more]
tr|M5X0D2|M5X0D2_PRUPE2.1e-8250.90Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa007682mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06317-RACarg06317-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 143..184
e-value: 2.0E-7
score: 40.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 142..185
e-value: 7.2E-14
score: 51.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 143..185
score: 12.991
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 118..192
e-value: 1.1E-21
score: 77.8
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..244
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 1..244
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 142..185
e-value: 3.62965E-18
score: 76.1865
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 131..192

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06317Cla021386Watermelon (97103) v1carwmB0961
Carg06317Csa3G129520Cucumber (Chinese Long) v2carcuB0975
Carg06317MELO3C006278Melon (DHL92) v3.5.1carmeB0941
Carg06317CSPI02G08640Wild cucumber (PI 183967)carcpiB0996
Carg06317CSPI03G10430Wild cucumber (PI 183967)carcpiB0998
Carg06317Cucsa.256790Cucumber (Gy14) v1carcgyB1077
Carg06317Cucsa.265900Cucumber (Gy14) v1carcgyB1078
Carg06317CmaCh17G000710Cucurbita maxima (Rimu)carcmaB1321
Carg06317CmaCh06G011870Cucurbita maxima (Rimu)carcmaB1325
Carg06317CmaCh14G019240Cucurbita maxima (Rimu)carcmaB1320
Carg06317CmoCh17G000760Cucurbita moschata (Rifu)carcmoB1285
Carg06317CmoCh14G019780Cucurbita moschata (Rifu)carcmoB1284
Carg06317CmoCh06G012260Cucurbita moschata (Rifu)carcmoB1288
Carg06317Lsi09G011000Bottle gourd (USVL1VR-Ls)carlsiB876
Carg06317Lsi05G018790Bottle gourd (USVL1VR-Ls)carlsiB878
Carg06317Cp4.1LG03g17760Cucurbita pepo (Zucchini)carcpeB1331
Carg06317Cp4.1LG12g00520Cucurbita pepo (Zucchini)carcpeB1328
Carg06317Cp4.1LG08g02420Cucurbita pepo (Zucchini)carcpeB1333
Carg06317CsGy2G008900Cucumber (Gy14) v2carcgybB0946
Carg06317CsGy3G010540Cucumber (Gy14) v2carcgybB0948
Carg06317MELO3C006278.2Melon (DHL92) v3.6.1carmedB0947
Carg06317CsaV3_3G010590Cucumber (Chinese Long) v3carcucB1003
Carg06317Bhi01G000130Wax gourdcarwgoB1118
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg06317Carg14898Silver-seed gourdcarcarB549
The following block(s) are covering this gene:
GeneOrganismBlock
Carg06317Silver-seed gourdcarcarB266
Carg06317Silver-seed gourdcarcarB649
Carg06317Cucurbita moschata (Rifu)carcmoB1289
Carg06317Cucurbita pepo (Zucchini)carcpeB1330
Carg06317Watermelon (Charleston Gray)carwcgB0935
Carg06317Watermelon (Charleston Gray)carwcgB0936
Carg06317Watermelon (97103) v2carwmbB1008
Carg06317Watermelon (97103) v2carwmbB1009