Carg13185 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13185
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NAC domain containing protein
Location	Cucurbita_argyrosperma_scaffold_101 : 831936 .. 834154 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGCAGCGTCCACCGGAGCTCGAACAAAGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTGGACTCCCATTTCTCATCACCCGCCATAGGCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGGTCAGCTATTTTATTCTCTTTCTAGGTTTTTCTTCCTAAATTTTCAATGATAGACAAGTTATTTTTCGATTATTTATATTTTAACATGATATCAGAGTGTCAAATCTTATAATGAGTATGATGTTACTGAACTGGTTAATTATGAAATATAATAAAATAAATTTAAGGATGTGATCGTAAAATTTTAAAATTTAAAGGGTTAATTGTAGATAAAATAAAAGGTTCAAGGACGAGATTGCAATAAATTTTGGATGGTTTGTGCAAATTTTTTGAGAAAATATTTAAATTTTAAAAATAAAAATAAATTTTTAAAAATCATAGTTTCATTTTGTAGTCTATTTAATTTTTTTTCTTACTTTTTTTTTTATCATGATTTTTATCTAATTAATCAAATTTATTTAAAAAAAAACTACTTTATTTTAGCTGCAATTTTAAAAATATTCGTAAAAATGAATAAATAAAAGTAATTATATATATATATTTTTTAATATAGTAATTAAAAAAAGAAAGTCTTACTAAGAGAGAGGAATTACAGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCGTCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGTTCCTCTCTTTTCCTCTCTCTCTCTCTCTCTCCTTTGTTTTTGGTTGAACACGACGGCGGCCACCAGTCGCCGTCGACGTTGATCCTTAAATTAATTATTTTAATATATATATTAATAAATAATGTTATAGTAGGTGAAATAATTAAAGATTTATTATATATGTTATAAATATTTCAGTACATTTATTATAATTTATACACATTATTTCGATGGAGGACCAATTTCAATGGAGAGGTTTTAATATTTTGGGAATAATAATAATTTCATAAATGAAATTTATGTTTATGTCCCTTCCCATTTATTTTTGGTATCGGTTCTGGAACAAGGTGGGAAATCTCCATTTAAATGGAGAGCGAGGGAGTGAAGAGAAATTTTTTTTCTTTAGCTAAATGGGAATGGGGATGAGGATTATTTCTTATCCCCATCCTTGATCCCGATCCCAATTCCCGCCTCAATAGCCATTTATTAGTGGTTTTTTCATTTTTTTTAATAGATAATTTTGTGAAAATGAAGAATGAAATAGGAGGCAAAGATGAAATTAGGTGTTTATATTATAAAGTTTGACATCACATTTATTAACGTAAACTTTACTAAATAGTAATGCTCGTGGAAAATATCATTCATGATTTTCGAACCTTATATTAAATACTATATGGTTGCCTTAGAATTAATGTTGTAACTATATATATATATATAATAAATATGAAACGCAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCCGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTATGCTGCTGCTGATACAAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCCGCAAGCTTCCCGGCTGGTGGCGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCACCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

mRNA sequence

ATGGACGGCAGCGTCCACCGGAGCTCGAACAAAGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTGGACTCCCATTTCTCATCACCCGCCATAGGCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCGTCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCCGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTATGCTGCTGCTGATACAAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCCGCAAGCTTCCCGGCTGGTGGCGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCACCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

Coding sequence (CDS)

ATGGACGGCAGCGTCCACCGGAGCTCGAACAAAGGGTACCTAGCGCCAGGGTTCCGGTTCCACCCGACCGACGAAGAGTTGATTGCTCATTACCTTTTGAAGAAGGTGTTGGACTCCCATTTCTCATCACCCGCCATAGGCTATGTCGACCTCAACAAGTCCGAGCCTTGGGACCTCCCTGAGAAAGCAGTAATGGGAGAGAAAGAGTGGTATTTCTTCAGCCTACGAGACCGGAAGTACCCAACCGGCCTGAGAACGAACCGGGCGACGGAGGCCGGCTACTGGAAGGCCACCGGAAAAGACAGAGAAATAACCAGCTCTAAAACAAACTCCGTCGTCGGGATGAAGAAGACCCTCGTCTTTTACACCGGCAGAGCTCCTAAAGGCCAAAAAACCCACTGGGTTATGCATGAGTTTCGTCTCGCCGGAAAATTCGCCTACCATTTTCTCTCCGCCGCCTCTTCCAAGGATGAATGGGTGATATCCAGAGTTTTCAAGAAAACCAGCGCCGCCATGCACGGCGGCGTGATGAAGAAAACTCGCCGTGATCCCGAACCCACTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGATTCATCTCCCTACCTCTATGCTGCTGCTGATACAAGTATCAGCACCTCCGCCTTCGCCAACCGCGACGGCAGCTCTCTCGACGACCAAAGGGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAACAACCTGAGCTACCCCGCCGCAAGCTTCCCGGCTGGTGGCGGTCATAATCTCTCCGTCTCGGCCTTCCCGAACCTTCGGAGCATCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCTGTGAGTCCGCCGCTGGTTCACCTCCTCTCCGGTGCCGCTGACGTGGATGGGTGCGGTGGTGCTCCGTCGCCGGAGGATTCGAGGACTATGGGTTCCGCCGATTTGGGTGCGTATATGTGGACCTTCTGA

Protein sequence

MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDSRTMGSADLGAYMWTF

Homology

[Close]

BLAST of Carg13185 vs. NCBI nr
Match: XP_023543274.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.0 bits (1665), Expect = 6.9e-182
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60
           MDGSVHRSSN GYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAI YVDLNKSEPWDLP
Sbjct: 1   MDGSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240
           RRDPEPTSPSSVSLPPLLDSSPYL AAADTSISTSAFANR+GSSLDDQREHELHVTCFST
Sbjct: 181 RRDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANREGSSLDDQREHELHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGG NLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGPNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRT+GSADLGAYMWTF
Sbjct: 301 APSPEDSRTIGSADLGAYMWTF 322

[Close]

BLAST of Carg13185 vs. NCBI nr
Match: XP_022942010.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 644.8 bits (1662), Expect = 1.5e-181
Identity = 315/322 (97.83%), Postives = 316/322 (98.14%), Query Frame = 0


Query: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60
           MD SVHRSSN GYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAI YVDLNKSEPWDLP
Sbjct: 1   MDSSVHRSSNNGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAYVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV
Sbjct: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FYTGRAPKGQKTHWVMHEF LAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT
Sbjct: 121 FYTGRAPKGQKTHWVMHEFHLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180

Query: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240
           R DPEPTSPSSVSLPPLLDSSPYL AAADTSISTSAFANRDGSSLDDQREH+LHVTCFST
Sbjct: 181 RGDPEPTSPSSVSLPPLLDSSPYLSAAADTSISTSAFANRDGSSLDDQREHQLHVTCFST 240

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300
           NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG
Sbjct: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGG 300

Query: 301 APSPEDSRTMGSADLGAYMWTF 323
           APSPEDSRTMGSADLGAYMWTF
Sbjct: 301 APSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of Carg13185 vs. NCBI nr
Match: XP_022922686.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 6.6e-132
Identity = 242/321 (75.39%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 3   GSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEK 62
           G  H+SS+ G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAI +VDLNKSEPWDLPEK
Sbjct: 7   GGGHQSSD-GFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66

Query: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122
           A+MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY
Sbjct: 67  ALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 126

Query: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTR 182
            GRAPKGQKT+WVMHEFRLAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   +KTR
Sbjct: 127 RGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTR 186

Query: 183 RDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTN 242
            DPEP+SPS VSLPPLLDSS                         D  EHELHVTCFSTN
Sbjct: 187 LDPEPSSPSLVSLPPLLDSSA------------------------DPSEHELHVTCFSTN 246

Query: 243 NLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGA 302
           N++Y     PAGGG +LS S FPNL S QENLQAPFFSPV PPLVHLL+ AA++ GCG  
Sbjct: 247 NVNY-----PAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDG 297

Query: 303 PSPEDSRTMGSADLGAYMWTF 323
           P+PEDSR +GSAD+  YMWTF
Sbjct: 307 PAPEDSRLVGSADMATYMWTF 297

[Close]

BLAST of Carg13185 vs. NCBI nr
Match: XP_023552861.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-131
Identity = 242/321 (75.39%), Postives = 263/321 (81.93%), Query Frame = 0


Query: 3   GSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEK 62
           G  H+SS+ G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAI +VDLNKSEPWDLPEK
Sbjct: 7   GGGHQSSD-GFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAITHVDLNKSEPWDLPEK 66

Query: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122
           A+MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY
Sbjct: 67  ALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 126

Query: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTR 182
            GRAPKGQKT+WVMHEFRLAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   +K+R
Sbjct: 127 RGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKSR 186

Query: 183 RDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTN 242
            DPEP+S SSVSLPPLLDSS                         D  EHELHVTCFSTN
Sbjct: 187 LDPEPSSSSSVSLPPLLDSSA------------------------DPSEHELHVTCFSTN 246

Query: 243 NLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGA 302
           N++Y     PAGGG +LS S FPNL S QENLQAPFFSPV PPLVHLL+ AA++ GCG  
Sbjct: 247 NVNY-----PAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDG 297

Query: 303 PSPEDSRTMGSADLGAYMWTF 323
           P+PEDSR +GSAD+ AYMWTF
Sbjct: 307 PAPEDSRLVGSADMAAYMWTF 297

[Close]

BLAST of Carg13185 vs. NCBI nr
Match: XP_022984419.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima])

HSP 1 Score: 476.5 bits (1225), Expect = 7.3e-131
Identity = 241/321 (75.08%), Postives = 262/321 (81.62%), Query Frame = 0


Query: 3   GSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEK 62
           G  H++S+ G+L PGFRFHPTDEELIAHYLLKKVLDSHFSSPAI +VDLNKSEPWDLPEK
Sbjct: 7   GGGHQNSD-GFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPWDLPEK 66

Query: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122
           A+MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY
Sbjct: 67  ALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 126

Query: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTR 182
            GRAPKGQKT+WVMHEFRLAGKFAYHFLSA SSKDEWVIS+VFKKT AAMHGG   KK R
Sbjct: 127 RGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTKKIR 186

Query: 183 RDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTN 242
            DPEP+SPSSVSLPP LDSS                         D  E+ELHVTCFSTN
Sbjct: 187 LDPEPSSPSSVSLPPRLDSSA------------------------DPSENELHVTCFSTN 246

Query: 243 NLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGA 302
           N++Y     PAGGG +LS S FPNL S QENLQAPFFSPV PPLVHLL+ AA++ GCG  
Sbjct: 247 NVNY-----PAGGGSDLSPSVFPNLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDG 297

Query: 303 PSPEDSRTMGSADLGAYMWTF 323
           P+PEDSR +GSAD+ AYMWTF
Sbjct: 307 PAPEDSRLVGSADMAAYMWTF 297

[Close]

BLAST of Carg13185 vs. TAIR10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-78
Identity = 175/335 (52.24%), Postives = 203/335 (60.60%), Query Frame = 0


Query: 13  YLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYF 72
           YL PGFRFHPTDEELI HYLL+KVLD  FSS AI  VDLNK EPW LP +A MGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 73  FSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKT 132
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT ++VGMKKTLVFY GRAPKG+K+
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 133 HWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMK-------------- 192
           +WVMHE+RL GKF+YHF+S  SSKDEWVISRVF+KT+ A  G V +              
Sbjct: 136 NWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEXXXXXXXXXXXXXX 195

Query: 193 -----KTR--------RDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSL 252
                KT+           +P+SPSSVSLPPLLD +  L    D+S S   + +R  ++ 
Sbjct: 196 XXXXXKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTL-GYTDSSCS---YDSRSTNTT 255

Query: 253 DDQREHELHVTCFST-------------------NNLSYPAASFPAGGGHNLSVSAFPNL 301
                   HV+CFST                     L +    FP     N+S  +  N 
Sbjct: 256 VTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNVSTQS--NF 315

[Close]

BLAST of Carg13185 vs. TAIR10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-71
Identity = 141/244 (57.79%), Postives = 172/244 (70.49%), Query Frame = 0


Query: 7   RSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMG 66
           R  ++  + PGFRFHPTDEELI +YLLKKVLDS+FS  AI  VDLNKSEPW+LPEKA MG
Sbjct: 13  RFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMG 72

Query: 67  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRA 126
           EKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S++GMKKTLVFY GRA
Sbjct: 73  EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRA 132

Query: 127 PKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEP 186
           PKG+K+ WVMHE+RL GKF+YH++S +S+KDEWV+ +V  K+     G V ++T      
Sbjct: 133 PKGEKSCWVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS-----GVVSRETN----- 192

Query: 187 TSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYP 246
                     L+ SS       + S + SA A    +   +      HV+CFS N+ ++ 
Sbjct: 193 ----------LISSSSSSAVTGEFSSAGSAIAPIINTFATE------HVSCFSNNSAAHT 229

Query: 247 AASF 251
            ASF
Sbjct: 253 DASF 229

[Close]

BLAST of Carg13185 vs. TAIR10
Match: AT5G61430.1 (NAC domain containing protein 100)

HSP 1 Score: 253.1 bits (645), Expect = 2.4e-67
Identity = 144/263 (54.75%), Postives = 174/263 (66.16%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD+ FS+ AIG VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 134 WVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEPTSPSSVS 193
           WVMHE+RL GKF+ H L   ++K+EWVI RVF+K++      +    R     T  +   
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSL 195

Query: 194 LPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYPAASFPAG 253
           LP L DSSPY        +    F+N+      DQ +    + CFS+  L+    S  A 
Sbjct: 196 LPSLTDSSPYNDKTKTEPVYVPCFSNQ-----TDQNQGTT-LNCFSSPVLN----SIQAD 255

Query: 254 GGHNLSVSAFPNLRSIQENLQAP 277
             H + +    +L+ +  NLQ+P
Sbjct: 256 IFHRIPLYQTQSLQ-VSMNLQSP 264

[Close]

BLAST of Carg13185 vs. TAIR10
Match: AT5G07680.1 (NAC domain containing protein 80)

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-66
Identity = 145/268 (54.10%), Postives = 168/268 (62.69%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD  FS+ AIG VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 134 WVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEPTSPSSVS 193
           WVMHE+RL GK + H L   ++K+EWVI RVF KT+      +    R     T     S
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS---S 196

Query: 194 LPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYPAASF--- 253
           LPPL DSSPY        +    F+N+              + CFS  +LS     F   
Sbjct: 197 LPPLTDSSPYNDKTKTEPVYVPCFSNQ-------AETRGTILNCFSNPSLSSIQPDFLQM 256

Query: 254 ---PAGGGHNLSVSAFPNLRSIQENLQA 276
                    N+S S+ P L   Q  LQA
Sbjct: 257 IPLYQPQSLNISESSNPVLTQEQSVLQA 271

[Close]

BLAST of Carg13185 vs. TAIR10
Match: AT3G29035.1 (NAC domain containing protein 3)

HSP 1 Score: 243.8 bits (621), Expect = 1.4e-64
Identity = 145/269 (53.90%), Postives = 175/269 (65.06%), Query Frame = 0


Query: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60
           ++G V   S K  L PGFRFHPTDEELI HYL  KV++S FS+ AIG VDLNK EPWDLP
Sbjct: 12  VEGEV-EDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLP 71

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
            KA +GEKEWYFF +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLV
Sbjct: 72  WKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGK--SLVGMKKTLV 131

Query: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FY GRAPKG KT+WVMHE+RL GKFA   LS  ++K+E VISRVF              T
Sbjct: 132 FYKGRAPKGVKTNWVMHEYRLEGKFAIDNLS-KTAKNECVISRVF-------------HT 191

Query: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240
           R D       SV LPPL+DSSPYL +    S++        G++L     H  + +  +T
Sbjct: 192 RTD-GTKEHMSVGLPPLMDSSPYLKSRGQDSLA--------GTTLGGLLSHVTYFSDQTT 251

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSI 270
           ++ S   A F      + S +  PN+ S+
Sbjct: 252 DDKSL-VADFKTTMFGSGSTNFLPNIGSL 253

[Close]

BLAST of Carg13185 vs. Swiss-Prot
Match: sp|O04017|NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-77
Identity = 175/335 (52.24%), Postives = 203/335 (60.60%), Query Frame = 0


Query: 13  YLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYF 72
           YL PGFRFHPTDEELI HYLL+KVLD  FSS AI  VDLNK EPW LP +A MGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 73  FSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKT 132
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT ++VGMKKTLVFY GRAPKG+K+
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 133 HWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMK-------------- 192
           +WVMHE+RL GKF+YHF+S  SSKDEWVISRVF+KT+ A  G V +              
Sbjct: 136 NWVMHEYRLEGKFSYHFIS-RSSKDEWVISRVFQKTTLASTGAVSEXXXXXXXXXXXXXX 195

Query: 193 -----KTR--------RDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSL 252
                KT+           +P+SPSSVSLPPLLD +  L    D+S S   + +R  ++ 
Sbjct: 196 XXXXXKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTL-GYTDSSCS---YDSRSTNTT 255

Query: 253 DDQREHELHVTCFST-------------------NNLSYPAASFPAGGGHNLSVSAFPNL 301
                   HV+CFST                     L +    FP     N+S  +  N 
Sbjct: 256 VTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNVSTQS--NF 315

[Close]

BLAST of Carg13185 vs. Swiss-Prot
Match: sp|Q9FRV4|NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.9e-70
Identity = 141/244 (57.79%), Postives = 172/244 (70.49%), Query Frame = 0


Query: 7   RSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMG 66
           R  ++  + PGFRFHPTDEELI +YLLKKVLDS+FS  AI  VDLNKSEPW+LPEKA MG
Sbjct: 13  RFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMG 72

Query: 67  EKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRA 126
           EKEWYFF+LRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S++GMKKTLVFY GRA
Sbjct: 73  EKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRA 132

Query: 127 PKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEP 186
           PKG+K+ WVMHE+RL GKF+YH++S +S+KDEWV+ +V  K+     G V ++T      
Sbjct: 133 PKGEKSCWVMHEYRLDGKFSYHYIS-SSAKDEWVLCKVCLKS-----GVVSRETN----- 192

Query: 187 TSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYP 246
                     L+ SS       + S + SA A    +   +      HV+CFS N+ ++ 
Sbjct: 193 ----------LISSSSSSAVTGEFSSAGSAIAPIINTFATE------HVSCFSNNSAAHT 229

Query: 247 AASF 251
            ASF
Sbjct: 253 DASF 229

[Close]

BLAST of Carg13185 vs. Swiss-Prot
Match: sp|Q9FLJ2|NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.3e-66
Identity = 144/263 (54.75%), Postives = 174/263 (66.16%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD+ FS+ AIG VDLNKSEPW+LP  A MGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 134 WVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEPTSPSSVS 193
           WVMHE+RL GKF+ H L   ++K+EWVI RVF+K++      +    R     T  +   
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSL 195

Query: 194 LPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYPAASFPAG 253
           LP L DSSPY        +    F+N+      DQ +    + CFS+  L+    S  A 
Sbjct: 196 LPSLTDSSPYNDKTKTEPVYVPCFSNQ-----TDQNQGTT-LNCFSSPVLN----SIQAD 255

Query: 254 GGHNLSVSAFPNLRSIQENLQAP 277
             H + +    +L+ +  NLQ+P
Sbjct: 256 IFHRIPLYQTQSLQ-VSMNLQSP 264

[Close]

BLAST of Carg13185 vs. Swiss-Prot
Match: sp|Q9FLR3|NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 6.2e-65
Identity = 145/268 (54.10%), Postives = 168/268 (62.69%), Query Frame = 0


Query: 14  LAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYFF 73
           L PGFRFHPTDEELI HYL KKVLD  FS+ AIG VDLNK+EPW+LP KA +GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 74  SLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTH 133
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLVFY GRAPKGQKT+
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 134 WVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKTRRDPEPTSPSSVS 193
           WVMHE+RL GK + H L   ++K+EWVI RVF KT+      +    R     T     S
Sbjct: 137 WVMHEYRLDGKLSAHNL-PKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGS---S 196

Query: 194 LPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNNLSYPAASF--- 253
           LPPL DSSPY        +    F+N+              + CFS  +LS     F   
Sbjct: 197 LPPLTDSSPYNDKTKTEPVYVPCFSNQ-------AETRGTILNCFSNPSLSSIQPDFLQM 256

Query: 254 ---PAGGGHNLSVSAFPNLRSIQENLQA 276
                    N+S S+ P L   Q  LQA
Sbjct: 257 IPLYQPQSLNISESSNPVLTQEQSVLQA 271

[Close]

BLAST of Carg13185 vs. Swiss-Prot
Match: sp|Q9LJW3|NAC59_ARATH (NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.6e-63
Identity = 145/269 (53.90%), Postives = 175/269 (65.06%), Query Frame = 0


Query: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60
           ++G V   S K  L PGFRFHPTDEELI HYL  KV++S FS+ AIG VDLNK EPWDLP
Sbjct: 12  VEGEV-EDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLP 71

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
            KA +GEKEWYFF +RDRKYPTGLRTNRAT+AGYWKATGKD+EI   K  S+VGMKKTLV
Sbjct: 72  WKAKLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGK--SLVGMKKTLV 131

Query: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVMKKT 180
           FY GRAPKG KT+WVMHE+RL GKFA   LS  ++K+E VISRVF              T
Sbjct: 132 FYKGRAPKGVKTNWVMHEYRLEGKFAIDNLS-KTAKNECVISRVF-------------HT 191

Query: 181 RRDPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFST 240
           R D       SV LPPL+DSSPYL +    S++        G++L     H  + +  +T
Sbjct: 192 RTD-GTKEHMSVGLPPLMDSSPYLKSRGQDSLA--------GTTLGGLLSHVTYFSDQTT 251

Query: 241 NNLSYPAASFPAGGGHNLSVSAFPNLRSI 270
           ++ S   A F      + S +  PN+ S+
Sbjct: 252 DDKSL-VADFKTTMFGSGSTNFLPNIGSL 253

[Close]

BLAST of Carg13185 vs. TrEMBL
Match: tr|A0A1S3C1U0|A0A1S3C1U0_CUCME (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 3.2e-127
Identity = 243/328 (74.09%), Postives = 270/328 (82.32%), Query Frame = 0


Query: 3   GSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEK 62
           G   + S+ GYL PGFRFHPTDEELI HYLLKKVL+SHFSSPAI +VDLNKSEPWDLPEK
Sbjct: 4   GGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEK 63

Query: 63  AVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFY 122
           A+MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLVFY
Sbjct: 64  ALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFY 123

Query: 123 TGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKT----SAAMHGGVMK 182
            GRAPKGQK++WVMHEFRLAGKF+YHFLSAA+SKDEWVISRVFKKT     AAMHGG MK
Sbjct: 124 RGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAMK 183

Query: 183 KTRR-DPEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTC 242
           KT R +PEP+SPSSVSLPPLLDSSPY  AAAD ++S++A+A  DG   DD REHELHVTC
Sbjct: 184 KTARPNPEPSSPSSVSLPPLLDSSPYTSAAADATVSSAAYA--DG---DDTREHELHVTC 243

Query: 243 FSTNNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPF-FSPVSPPLVHLLSGAADVD 302
           FSTNNL+Y +           S SAFP   S QENLQAPF  SPV P LVHL++GAA++D
Sbjct: 244 FSTNNLNYCS-----------SASAFP---SFQENLQAPFLISPVGPSLVHLVAGAANLD 303

Query: 303 GCGGAPSPEDSRTMGSADLGA--YMWTF 323
           GCGG P+PE     GSAD+ A  YMW F
Sbjct: 304 GCGGGPTPE-----GSADVNASGYMWRF 307

[Close]

BLAST of Carg13185 vs. TrEMBL
Match: tr|A0A0A0L787|A0A0A0L787_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.8e-123
Identity = 239/331 (72.21%), Postives = 266/331 (80.36%), Query Frame = 0


Query: 1   MDGSVHRSSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLP 60
           M+G   + S+ GYL PGFRFHPTDEELI HYLLKKVL+SHFSSPAI +VDLNKSEPWDLP
Sbjct: 1   MEGGGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLP 60

Query: 61  EKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLV 120
           EKA+MGEKEWYFFS+RDRKYPTGLRTNRATEAGYWKATGKDREI SSKTNS++GMKKTLV
Sbjct: 61  EKALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLV 120

Query: 121 FYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKT----SAAMHGGV 180
           FY GRAPKGQK++WVMHEFRLAGKF+YHFLSAA+SKDEWVISRVFKKT     A MHGG 
Sbjct: 121 FYRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGGA 180

Query: 181 MKKTRRDPEPTSPSSVSLPPLLDSSPYLYA--AADTSISTSAFANRDGSSLDDQREHELH 240
           MKKT  +PEP+SPSSVSLPPLLDSSPY  A  AAD ++S++A+A  DG   DD REHELH
Sbjct: 181 MKKTCPNPEPSSPSSVSLPPLLDSSPYPSAAVAADATVSSAAYA--DG---DDTREHELH 240

Query: 241 VTCFSTNNLSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPF-FSPVSPPLVHLLSGAA 300
           VTCFSTNNL+Y             S SAFP   S QENLQAPF  SPV P LVHL+  AA
Sbjct: 241 VTCFSTNNLNY------------CSASAFP---SFQENLQAPFLISPVGPSLVHLVGEAA 300

Query: 301 DVDGCGGAPSPEDSRTMGSADL--GAYMWTF 323
           ++DG GG P+PE     GSAD+   AY+W F
Sbjct: 301 NLDGYGGGPTPE-----GSADVNASAYVWRF 306

[Close]

BLAST of Carg13185 vs. TrEMBL
Match: tr|A0A2R6PTJ8|A0A2R6PTJ8_ACTCH (Protein CUP-SHAPED COTYLEDON 2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26425 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.0e-93
Identity = 193/323 (59.75%), Postives = 227/323 (70.28%), Query Frame = 0


Query: 12  GYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWY 71
           G L PGFRFHPTDEELI +YLLKKVLD +FS  AI  VDLNK EPW+LPEKA MGEKEWY
Sbjct: 13  GNLPPGFRFHPTDEELITYYLLKKVLDGNFSCRAIAEVDLNKCEPWELPEKAKMGEKEWY 72

Query: 72  FFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQK 131
           FFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT S+VGMKKTLVFY GRAPKG+K
Sbjct: 73  FFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEK 132

Query: 132 THWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGV-MKKTRRDP------ 191
           T+WVMHE+RL GKF+YH+LS A+SKDEWVISR+F+K+ +A+  GV +KKTR +P      
Sbjct: 133 TNWVMHEYRLDGKFSYHYLS-ATSKDEWVISRLFQKSGSAVTVGVSVKKTRLNPGGINLY 192

Query: 192 -EPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTNN- 251
            E +SPS  SLPPLLDSSP+  A  + S  +SA A               HV CFST N 
Sbjct: 193 QEASSPSCSSLPPLLDSSPFATATDNNSYDSSAAAKE-------------HVPCFSTTNF 252

Query: 252 -----------LSYPAASFPAGGGHNLSVSAFPNLRSIQENLQAPFFSPVSPPLVHLLSG 311
                      +  P++ FP   G +  +  FPNL+S+QENLQ PFFS V+PPL+H    
Sbjct: 253 YPLAPFDPIAAMVDPSSRFPGNTGGS-GLQGFPNLKSLQENLQIPFFSAVAPPLIH---D 312

[Close]

BLAST of Carg13185 vs. TrEMBL
Match: tr|M5X664|M5X664_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G175800 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.8e-92
Identity = 205/349 (58.74%), Postives = 238/349 (68.19%), Query Frame = 0


Query: 13  YLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDLPEKAVMGEKEWYF 72
           +L PGFRFHPTDEELI +YLLKKVLDS F+  AI  VDLNK EPW+LP+KA MGEKEWYF
Sbjct: 17  HLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIAEVDLNKCEPWELPDKAKMGEKEWYF 76

Query: 73  FSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKT 132
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT ++VGMKKTLVFY GRAPKG+K+
Sbjct: 77  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFYRGRAPKGEKS 136

Query: 133 HWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTS-AAMHGGVMKKTRRD-------- 192
           +WVMHE+RL GKFAYH+LS  SSKDEWVISRVF+K+S +  +G   KKTR          
Sbjct: 137 NWVMHEYRLEGKFAYHYLS-RSSKDEWVISRVFQKSSGSTTNGPGSKKTRMSNGSTSSIS 196

Query: 193 --PEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLDDQREHELHVTCFSTN 252
             PEP+SPSSVSLPPLLDSSPY       +++T+   +RD  S D     E HV+CFSTN
Sbjct: 197 LYPEPSSPSSVSLPPLLDSSPY------QNMNTAGLTDRDSCSYDSPIPKE-HVSCFSTN 256

Query: 253 -----NLSYPAASF--------PAGGGHNLSVSAFPNLRSIQENLQAP-FFSPVS-PPLV 312
                NLS              P+ GG    VSAFP+LRS+QENLQ P FFSP+S    V
Sbjct: 257 PNSGFNLSSSCFDLAHAQPPPQPSFGG----VSAFPSLRSLQENLQLPFFFSPMSGHQPV 316

Query: 313 HLLS------GAADVDGCGGA-------PSPEDSRTMGSADLGAYMWTF 323
           H+ S         D+ G   A       P  E+ RT+G  +L   MWT+
Sbjct: 317 HVGSSGXXXXSTIDLGGLSSAGSWPTPPPHQEEPRTVGPTELDC-MWTY 352

[Close]

BLAST of Carg13185 vs. TrEMBL
Match: tr|V7BY28|V7BY28_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G074500g PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.8e-92
Identity = 201/350 (57.43%), Postives = 236/350 (67.43%), Query Frame = 0


Query: 1   MDGSVHR-SSNKGYLAPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIGYVDLNKSEPWDL 60
           MD S H     + +L PGFRFHPTDEELI +YLLKKVLDS F+  AI  VDLNKSEPW+L
Sbjct: 1   MDSSYHHLDHTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEPWEL 60

Query: 61  PEKAVMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREITSSKTNSVVGMKKTL 120
           PEKA MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREI SSKT+S+VGMKKTL
Sbjct: 61  PEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTSSLVGMKKTL 120

Query: 121 VFYTGRAPKGQKTHWVMHEFRLAGKFAYHFLSAASSKDEWVISRVFKKTSAAMHGGVM-- 180
           VFY GRAPKG+K++WVMHE+RL GKFAYH+LS  +SKDEWVISRVF+K++ +  G  M  
Sbjct: 121 VFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLS-RNSKDEWVISRVFQKSNTSNGGSAMSA 180

Query: 181 ----KKTRRD-------PEPTSPSSVSLPPLLDSSPYLYAAADTSISTSAFANRDGSSLD 240
               KKTR +       PEP+SPSSV LPPLLDSSPY    A+T+ + + F  R+  S D
Sbjct: 181 SSGSKKTRMNTTNSSLCPEPSSPSSVYLPPLLDSSPY----ANTTTAVN-FTGRNNCSYD 240

Query: 241 DQREHELHVTCFST-----------NNLSYPAASFP----------AGGGHNLSVSAFPN 300
              + E HV+CFST           NN +  +   P          A    N+ VSAFP+
Sbjct: 241 STTKKE-HVSCFSTIAAATAAVVSPNNFTNASFDLPPSQSLGTDPFARFQRNVGVSAFPS 300

Query: 301 LRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGA--PSPEDSRTMGSA 314
           LRS+Q+NLQ PFF    PP     S    V G G    P PE+ R + +A
Sbjct: 301 LRSLQDNLQLPFF---FPPAAQPFS----VSGTGDLLWPMPEEQRLVDAA 336

The following BLAST results are available for this feature:

BLAST of Carg13185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543274.1	6.9e-182	98.14	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942010.1	1.5e-181	97.83	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
XP_022922686.1	6.6e-132	75.39	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
XP_023552861.1	1.9e-131	75.39	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984419.1	7.3e-131	75.08	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima]	[more]

BLAST of Carg13185 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53950.1	1.0e-78	52.24	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	2.7e-71	57.79	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G61430.1	2.4e-67	54.75	NAC domain containing protein 100	[more]
AT5G07680.1	3.4e-66	54.10	NAC domain containing protein 80	[more]
AT3G29035.1	1.4e-64	53.90	NAC domain containing protein 3	[more]

BLAST of Carg13185 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04017\|NAC98_ARATH	1.8e-77	52.24	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
sp\|Q9FRV4\|NAC54_ARATH	4.9e-70	57.79	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
sp\|Q9FLJ2\|NC100_ARATH	4.3e-66	54.75	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
sp\|Q9FLR3\|NAC79_ARATH	6.2e-65	54.10	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
sp\|Q9LJW3\|NAC59_ARATH	2.6e-63	53.90	NAC domain-containing protein 59 OS=Arabidopsis thaliana OX=3702 GN=NAC59 PE=1 S...	[more]

BLAST of Carg13185 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1U0\|A0A1S3C1U0_CUCME	3.2e-127	74.09	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4...	[more]
tr\|A0A0A0L787\|A0A0A0L787_CUCSA	2.8e-123	72.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1	[more]
tr\|A0A2R6PTJ8\|A0A2R6PTJ8_ACTCH	4.0e-93	59.75	Protein CUP-SHAPED COTYLEDON 2 like OS=Actinidia chinensis var. chinensis OX=159...	[more]
tr\|M5X664\|M5X664_PRUPE	9.8e-92	58.74	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G175800 PE=4 SV=1	[more]
tr\|V7BY28\|V7BY28_PHAVU	9.8e-92	57.43	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G074500g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom
IPR036093	NAC_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13185-RA	Carg13185-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 23..172 e-value: 6.9E-58 score: 196.8
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 10..167
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..141 e-value: 4.3E-36 score: 124.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..167 score: 57.892
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 9..247
None	No IPR available	PANTHER	PTHR31744:SF22	SUBFAMILY NOT NAMED	coord: 9..247

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13185	Cla004290	Watermelon (97103) v1	carwmB0048
Carg13185	Csa3G234520	Cucumber (Chinese Long) v2	carcuB0043
Carg13185	MELO3C019401	Melon (DHL92) v3.5.1	carmeB0041
Carg13185	ClCG05G009250	Watermelon (Charleston Gray)	carwcgB0045
Carg13185	CSPI03G19470	Wild cucumber (PI 183967)	carcpiB0047
Carg13185	Cucsa.032500	Cucumber (Gy14) v1	carcgyB0048
Carg13185	CmaCh04G005540	Cucurbita maxima (Rimu)	carcmaB0055
Carg13185	CmaCh16G004050	Cucurbita maxima (Rimu)	carcmaB0053
Carg13185	CmoCh16G004380	Cucurbita moschata (Rifu)	carcmoB0055
Carg13185	CmoCh04G005870	Cucurbita moschata (Rifu)	carcmoB0058
Carg13185	Lsi05G001350	Bottle gourd (USVL1VR-Ls)	carlsiB039
Carg13185	Cp4.1LG01g01680	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13185	Cp4.1LG14g03650	Cucurbita pepo (Zucchini)	carcpeB0059
Carg13185	MELO3C019401.2	Melon (DHL92) v3.6.1	carmedB0042
Carg13185	CsaV3_3G019530	Cucumber (Chinese Long) v3	carcucB0048
Carg13185	Cla97C05G091580	Watermelon (97103) v2	carwmbB0042
Carg13185	Bhi01G001153	Wax gourd	carwgoB0050

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13185	Carg11337	Silver-seed gourd	carcarB051

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13185	Cucumber (Gy14) v2	carcgybB0043