Carg11337 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11337
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NAC domain containing protein
Location	Cucurbita_argyrosperma_scaffold_025 : 349152 .. 352490 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCACGGCGGCAGCGGCGGCGGACACCAGAGCTCCGACGGGTTCCTCCCACCGGGTTTCCGCTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAAAAGGTGCTGGACTCCCATTTCTCCTCGCCCGCCATCGCCCATGTCGACCTCAACAAGTCCGAGCCCTGGGACCTCCCTGGTCAGCTCTCTTTCTATATATATATATTGTTAGACGAACACGATTCTCTATAATGATATCATATTATCATCTTTGAACTCCCCTTCAAGACTTTAAAACGTGTCTGATACGTCGAGGTTTCCATCCCCTTATAAGGGGTGGTTTGTTCTTCTCCCCAACCAATGTGGGACATCACAATCCACCCCCTTCAAGACCCAGCGTCCTTGCTGACACTCAATCCTTCTTTGATGTGGGACCACCCTCAATTCCATTCCCCTTTGGGGCCTAGCGTCCTTACTAACACACCACCTTGTGTCTACCTCCCTCCGAGGAACAGCGAGAAAAGTGACACATCGTCCGAAGTCTAACTCTGATACCATTTGTAACGACCTAGGCCCACTGCTAGCAGATATTGTCCTCTCTTGGCTTTCCCTCTCGATTACCGTCAAAGCTTTAAAAGTCAACTGATAGGAAAAAGTTTCTACACAATTATAAGTGGTGGTTTGTTCTCCTCTATAACCAATGTGGATATTACTCCTATTGTCCAGCATAAGCTCTTGTGACTTTGTTTTTTATTTCTTCATCGCCCACTGTACCTCAGATAGTTCCATTATTGGGAATTCATGATTGGTCCTAAGCTGAGTGACGTTCTAATATATATATATTATGTATATATATATATATCTATATTTTTATCCGATATTATAAATATAATAACTAAGGTAACATGACTTTAAACACGCTGATCTGAATACGTCGAGTATTTCTTCAGCTTATAAGACCGGTTTGTTCTACTCGACCGGGTTAACCAACCGGCGACATCACGGATACTGGAAGGCGACCTCTCTCGGAAGGACCCAAAATAATTGGCTGACAACCAACTCATTCTTTTGATGTGGAAGACGCTCAATTCTACAGAGGTGGGAGCCTCGTCCTTACTAACACACCAACTGGTGTATACATGTAATCCGTCTCGCGCGGGAAAAGTGACTTACCATCCGACTCGTCGATTCTGATAGCCTCTTCTCTAACGAACCTAGGCCTCTCTCTGCGGTTAAGAAGATATTGTTGATTCTCTTAGTGTATCTCTCTCTCGCGTCTTTCTATAAATTTCATGTTAAAACACTCCTGTACCCAAGAAAAACAGTAGAGTAGTATTCATGTTATTATTGAAATTCTTATGATCATTCTCTATCGTGAGATGACGTTGACAATTGTTTGACTTTACGTATACGTATGTTATATCCAATATATCGTTATCCTCTAGTTTATATTTAGGGTTTTATACCCTGGTATATATATATATATTTGTTTTTTTTTGTTGTTCCCTCAGATTTTATTTGAGCACACTTTTTCGTAGTATTTTATGCTAAACTCCTACATAAGTCTATACTTGCGGTTTAAATTATATTTTTCACAAGAGAAAATCGTCCTATAGTGCTAAATCTAGTGGCGCGAGGAACAAAGAGACGCTTCGAAAAACGAGTGGTATTCTTCAGGCTTCGGCGAGACCGGGAAATACTCCGACATGTGGACTCCTCGGAACTGGTTTTGTTAGGAAGCGTACAGCCGGGCGACGAGGCCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCTCCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGTCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGTTCTCTCTCTCTCCCTCTCTCTCCCCCTCTCTCTCTCGGTTGAAGAAGTCGCCGTCGACGTTGATAGTTTAATTAATTCATTTTCTTTTAAATAAATTAACTCATATCAACGTCAACAGCCTTTCCGATATCCTCTGTTAAAGCTACCACTATTCACCATTTTAATCAGTATACGCACTCAGGTTTCTCTTAGATAAAATTTTTAATTAATTAAATTCATATAAGGTAGTATACACCTATAATCATTCTCCAATGCCGTGCAATTAATTAAAGGAATCTCAATTCTTCTTATATTTAATAAATTAAAGAAAAATACACATGTATCTATTGTAAAGTGCTGTACCTTACTGTGTCTGATATTTTGCTATTTAGCAAAAAAAAAAAAAAAACATTTATTTTTGTGAAAATTCACAGGAATTTTTTTTTAAGATTAATTTTAATATGATATCTATTAAAAAATAAAAAAAAATCATAATAAATTCAATAATATTTCATAAACTAAATATATAATATATTTTTAGTGTAATTTGTTTAATATATATATATATATTATTTTTAATTAAAGCCACGTGTTATCTTTATTTAAATATGGTCAATCTTGAAGTAAAATAATAAAATTTACAATATAGTTAAAATAATTGATGATATATATAGGCAGACAAAGACCCTTCGGTTGAATTTAAAAAAATGGGCAGTAAATAATTTTGTAGCATTTATTTTTGGTACAAATAATATTCTATAGTAGGTAAAGCAATAATAAAATATTTATTCTAAAAATGAATGTCTAAATATTTTATAATATATAGTACACATTATTTGGATGGAGGGCCAATTTCAATGAAGAGGTTTTAATGTTTGGGAATAATAATTATGATGTCATAAATTAAATTTATTTTTCATGTCCCTTTCTATTTATTTTCCTCATATTTATTTATTTATTTATTTATTTCTTTATTTATTACGTGCATGTAACAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAGGAAGACTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGACTCCTCCGCCGACCCGAGTGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAATAACGTTAACTACCCTGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAGCCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGCGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGA

mRNA sequence

ATGGATCACGGCGGCAGCGGCGGCGGACACCAGAGCTCCGACGGGTTCCTCCCACCGGGTTTCCGCTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAAAAGGAAGCGTACAGCCGGGCGACGAGGCCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCTCCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGTCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAGGAAGACTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGACTCCTCCGCCGACCCGAGTGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAATAACGTTAACTACCCTGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAGCCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGCGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGA

Coding sequence (CDS)

ATGGATCACGGCGGCAGCGGCGGCGGACACCAGAGCTCCGACGGGTTCCTCCCACCGGGTTTCCGCTTCCACCCGACCGACGAAGAGCTGATCGCCCATTACCTTCTGAAAAAGGAAGCGTACAGCCGGGCGACGAGGCCCGGGTACTGGAAGGCGACCGGAAAGGACCGGGAAATAATGAGCTCGAAAACCAACTCATTAATTGGGATGAAGAAGACGCTTGTTTTCTACAGAGGCAGAGCTCCAAAAGGCCAAAAGACCAACTGGGTTATGCATGAATTTCGTCTCGCCGGAAAATTTGCTTACCATTTTCTCTCCGCCGATTCTTCCAAGGATGAATGGGTGATATCCAAAGTTTTCAAGAAAACCGGCGCCGCCATGCACGGCGGCTCATCGACGAGGAAGACTCGCCTGGATCCCGAACCGAGTTCCCCTTCCTCGGTGTCTCTGCCTCCTCTTCTCGACTCCTCCGCCGACCCGAGTGAGCACGAGCTGCACGTGACCTGTTTCTCCACCAATAACGTTAACTACCCTGCCGGCGGAGGCTCTGATCTCTCCCCCTCGGTCTTCCCGAGCCTTCTGAGCTTCCAGGAGAATCTGCAGGCGCCGTTCTTCTCCCCCGTGGGTCCGCCGCTGGTTCATCTACTCACCGACGCTGCTGAGTTGGTTGGGTGCGGCGATGGTCCGGCACCGGAGGATTCGAGGCTTGTCGGCTCCGCTGACATGGCTGCTTATATGTGGACCTTCTGA

Protein sequence

MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLKKEAYSRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPSLLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF

Homology

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BLAST of Carg11337 vs. NCBI nr
Match: XP_022922686.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 472.6 bits (1215), Expect = 8.1e-130
Identity = 242/297 (81.48%), Postives = 244/297 (82.15%), Query Frame = 0


Query: 1   MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK----------------------- 60
           MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK                       
Sbjct: 1   MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPW 60

Query: 61  ----------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKK 120
                     KE Y               +RAT  GYWKATGKDREIMSSKTNSLIGMKK
Sbjct: 61  DLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKK 120

Query: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180
           TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS
Sbjct: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180

Query: 181 TRKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPS 240
           TRKTRLDPEPSSPS VSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFP+
Sbjct: 181 TRKTRLDPEPSSPSLVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPN 240

Query: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 250
           LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMA YMWTF
Sbjct: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMATYMWTF 297

[Close]

BLAST of Carg11337 vs. NCBI nr
Match: XP_023552861.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129
Identity = 242/297 (81.48%), Postives = 245/297 (82.49%), Query Frame = 0


Query: 1   MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK----------------------- 60
           MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK                       
Sbjct: 1   MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAITHVDLNKSEPW 60

Query: 61  ----------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKK 120
                     KE Y               +RAT  GYWKATGKDREIMSSKTNSLIGMKK
Sbjct: 61  DLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKK 120

Query: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180
           TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS
Sbjct: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180

Query: 181 TRKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPS 240
           TRK+RLDPEPSS SSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFP+
Sbjct: 181 TRKSRLDPEPSSSSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPN 240

Query: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 250
           LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF
Sbjct: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 297

[Close]

BLAST of Carg11337 vs. NCBI nr
Match: XP_022984419.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 1.3e-127
Identity = 238/297 (80.13%), Postives = 244/297 (82.15%), Query Frame = 0


Query: 1   MDHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK----------------------- 60
           M+HGGSGGGHQ+SDGFLPPGFRFHPTDEELIAHYLLK                       
Sbjct: 1   MEHGGSGGGHQNSDGFLPPGFRFHPTDEELIAHYLLKKVLDSHFSSPAIAHVDLNKSEPW 60

Query: 61  ----------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKK 120
                     KE Y               +RAT  GYWKATGKDREIMSSKTNSLIGMKK
Sbjct: 61  DLPEKALMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKK 120

Query: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180
           TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS
Sbjct: 121 TLVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS 180

Query: 181 TRKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPS 240
           T+K RLDPEPSSPSSVSLPP LDSSADPSE+ELHVTCFSTNNVNYPAGGGSDLSPSVFP+
Sbjct: 181 TKKIRLDPEPSSPSSVSLPPRLDSSADPSENELHVTCFSTNNVNYPAGGGSDLSPSVFPN 240

Query: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 250
           LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF
Sbjct: 241 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 297

[Close]

BLAST of Carg11337 vs. NCBI nr
Match: XP_023543274.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 4.7e-85
Identity = 166/237 (70.04%), Postives = 183/237 (77.22%), Query Frame = 0


Query: 42  SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTNWVMHEFRLAGKFA 101
           +RAT  GYWKATGKDREI SSKTNS++GMKKTLVFY GRAPKGQKT+WVMHEFRLAGKFA
Sbjct: 87  NRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFRLAGKFA 146

Query: 102 YHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPSSPSSVSLPPLLDSSA--- 161
           YHFLSA SSKDEWVIS+VFKKT AAMHGG   +KTR DPEP+SPSSVSLPPLLDSS    
Sbjct: 147 YHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTRRDPEPTSPSSVSLPPLLDSSPYLS 206

Query: 162 ---------------------DPSEHELHVTCFSTNNVNY-----PAGGGSDLSPSVFPS 221
                                D  EHELHVTCFSTNN++Y     PAGGG +LS S FP+
Sbjct: 207 AAADTSISTSAFANREGSSLDDQREHELHVTCFSTNNLSYPAASFPAGGGPNLSVSAFPN 266

Query: 222 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 250
           L S QENLQAPFFSPV PPLVHLL+ AA++ GCG  P+PEDSR +GSAD+ AYMWTF
Sbjct: 267 LRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDSRTIGSADLGAYMWTF 322

[Close]

BLAST of Carg11337 vs. NCBI nr
Match: XP_022942010.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 164/237 (69.20%), Postives = 182/237 (76.79%), Query Frame = 0


Query: 42  SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTNWVMHEFRLAGKFA 101
           +RAT  GYWKATGKDREI SSKTNS++GMKKTLVFY GRAPKGQKT+WVMHEF LAGKFA
Sbjct: 87  NRATEAGYWKATGKDREITSSKTNSVVGMKKTLVFYTGRAPKGQKTHWVMHEFHLAGKFA 146

Query: 102 YHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPSSPSSVSLPPLLDSSA--- 161
           YHFLSA SSKDEWVIS+VFKKT AAMHGG   +KTR DPEP+SPSSVSLPPLLDSS    
Sbjct: 147 YHFLSAASSKDEWVISRVFKKTSAAMHGG-VMKKTRGDPEPTSPSSVSLPPLLDSSPYLS 206

Query: 162 ---------------------DPSEHELHVTCFSTNNVNY-----PAGGGSDLSPSVFPS 221
                                D  EH+LHVTCFSTNN++Y     PAGGG +LS S FP+
Sbjct: 207 AAADTSISTSAFANRDGSSLDDQREHQLHVTCFSTNNLSYPAASFPAGGGHNLSVSAFPN 266

Query: 222 LLSFQENLQAPFFSPVGPPLVHLLTDAAELVGCGDGPAPEDSRLVGSADMAAYMWTF 250
           L S QENLQAPFFSPV PPLVHLL+ AA++ GCG  P+PEDSR +GSAD+ AYMWTF
Sbjct: 267 LRSIQENLQAPFFSPVSPPLVHLLSGAADVDGCGGAPSPEDSRTMGSADLGAYMWTF 322

[Close]

BLAST of Carg11337 vs. TAIR10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-44
Identity = 122/289 (42.21%), Postives = 139/289 (48.10%), Query Frame = 0


Query: 2   DHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK------------------------ 61
           DHGG          +LPPGFRFHPTDEELI HYLL+                        
Sbjct: 9   DHGG-------DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQ 68

Query: 62  ---------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKT 121
                    KE Y               +RAT  GYWKATGKDREI SSKT +L+GMKKT
Sbjct: 69  LPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKT 128

Query: 122 LVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG--- 181
           LVFY+GRAPKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVIS+VF+KT  A  G    
Sbjct: 129 LVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISR-SSKDEWVISRVFQKTTLASTGAVSE 188

Query: 182 -----------------------SSTRKTRLDPEPSSPSSVSLPPLLD------------ 197
                                   ST       +PSSPSSVSLPPLLD            
Sbjct: 189 XXXXXXXXXXXXXXXXXXXKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSC 248

[Close]

BLAST of Carg11337 vs. TAIR10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-38
Identity = 101/240 (42.08%), Postives = 130/240 (54.17%), Query Frame = 0


Query: 5   GSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK--------------------------- 64
           G G      +  +PPGFRFHPTDEELI +YLLK                           
Sbjct: 8   GWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPE 67

Query: 65  ------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
                 KE Y               +RAT  GYWKATGKDREI SSKT SL+GMKKTLVF
Sbjct: 68  KAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVF 127

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG---SST 184
           Y+GRAPKG+K+ WVMHE+RL GKF+YH++S+ S+KDEWV+ KV  K+G         SS+
Sbjct: 128 YKGRAPKGEKSCWVMHEYRLDGKFSYHYISS-SAKDEWVLCKVCLKSGVVSRETNLISSS 187

Query: 185 RKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPSL 194
             + +  E SS  S ++ P++++ A       HV+CFS N+  +         P+  PSL
Sbjct: 188 SSSAVTGEFSSAGS-AIAPIINTFATE-----HVSCFSNNSAAHTDASFHTFLPAPPPSL 240

[Close]

BLAST of Carg11337 vs. TAIR10
Match: AT5G39610.1 (NAC domain containing protein 6)

HSP 1 Score: 141.4 bits (355), Expect = 7.8e-34
Identity = 90/205 (43.90%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 17  LPPGFRFHPTDEELIAHYLL---------------------------------KKEAY-- 76
           LPPGFRFHPTDEELI HYL                                  +KE Y  
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYFF 79

Query: 77  -------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
                        +RAT  GYWKATGKD+EI   K  SL+GMKKTLVFY+GRAPKG KTN
Sbjct: 80  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 139

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPSSPSSV 172
           WVMHE+RL GK+    L   ++K+EWVI +VF+K       G+    + LDP  +     
Sbjct: 140 WVMHEYRLEGKYCIENL-PQTAKNEWVICRVFQKRA----DGTKVPMSMLDPHINRMEPA 199

[Close]

BLAST of Carg11337 vs. TAIR10
Match: AT5G61430.1 (NAC domain containing protein 100)

HSP 1 Score: 137.9 bits (346), Expect = 8.6e-33
Identity = 100/238 (42.02%), Postives = 123/238 (51.68%), Query Frame = 0


Query: 17  LPPGFRFHPTDEELIAHYLLK---------------------------------KEAY-- 76
           LPPGFRFHPTDEELI HYL K                                 KE Y  
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 77  -------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
                        +RAT  GYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS---TRKTRLDPEPSSP 196
           WVMHE+RL GKF+ H L   ++K+EWVI +VF+K+     GG     +   R+    +  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSA----GGKKIPISSLIRIGSLGTDF 195

Query: 197 SSVSLPPLLDSSA--DPSEHE-LHVTCFSTNNVNYPAGGGSDLSPSVFPSLLSFQENL 201
           +   LP L DSS   D ++ E ++V CFS          G+ L+    P L S Q ++
Sbjct: 196 NPSLLPSLTDSSPYNDKTKTEPVYVPCFSNQT---DQNQGTTLNCFSSPVLNSIQADI 243

[Close]

BLAST of Carg11337 vs. TAIR10
Match: AT2G24430.1 (NAC domain containing protein 38)

HSP 1 Score: 134.8 bits (338), Expect = 7.3e-32
Identity = 73/164 (44.51%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 10  HQSSDGFLPPGFRFHPTDEELIAHYLLKKEA----------------------------- 69
           H+  +  LPPGFRFHPTDEELI++YL+ K A                             
Sbjct: 9   HKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMG 68

Query: 70  -------------------YSRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRA 126
                               +RAT  GYWK TGKD+EI +S T+ L+GMKKTLVFYRGRA
Sbjct: 69  GKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRA 128

[Close]

BLAST of Carg11337 vs. Swiss-Prot
Match: sp|O04017|NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.1e-43
Identity = 122/289 (42.21%), Postives = 139/289 (48.10%), Query Frame = 0


Query: 2   DHGGSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK------------------------ 61
           DHGG          +LPPGFRFHPTDEELI HYLL+                        
Sbjct: 9   DHGG-------DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQ 68

Query: 62  ---------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKT 121
                    KE Y               +RAT  GYWKATGKDREI SSKT +L+GMKKT
Sbjct: 69  LPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKT 128

Query: 122 LVFYRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG--- 181
           LVFY+GRAPKG+K+NWVMHE+RL GKF+YHF+S  SSKDEWVIS+VF+KT  A  G    
Sbjct: 129 LVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISR-SSKDEWVISRVFQKTTLASTGAVSE 188

Query: 182 -----------------------SSTRKTRLDPEPSSPSSVSLPPLLD------------ 197
                                   ST       +PSSPSSVSLPPLLD            
Sbjct: 189 XXXXXXXXXXXXXXXXXXXKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSC 248

[Close]

BLAST of Carg11337 vs. Swiss-Prot
Match: sp|Q9FRV4|NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-37
Identity = 101/240 (42.08%), Postives = 130/240 (54.17%), Query Frame = 0


Query: 5   GSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK--------------------------- 64
           G G      +  +PPGFRFHPTDEELI +YLLK                           
Sbjct: 8   GWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPE 67

Query: 65  ------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
                 KE Y               +RAT  GYWKATGKDREI SSKT SL+GMKKTLVF
Sbjct: 68  KAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVF 127

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGG---SST 184
           Y+GRAPKG+K+ WVMHE+RL GKF+YH++S+ S+KDEWV+ KV  K+G         SS+
Sbjct: 128 YKGRAPKGEKSCWVMHEYRLDGKFSYHYISS-SAKDEWVLCKVCLKSGVVSRETNLISSS 187

Query: 185 RKTRLDPEPSSPSSVSLPPLLDSSADPSEHELHVTCFSTNNVNYPAGGGSDLSPSVFPSL 194
             + +  E SS  S ++ P++++ A       HV+CFS N+  +         P+  PSL
Sbjct: 188 SSSAVTGEFSSAGS-AIAPIINTFATE-----HVSCFSNNSAAHTDASFHTFLPAPPPSL 240

[Close]

BLAST of Carg11337 vs. Swiss-Prot
Match: sp|Q9FKA0|NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 90/205 (43.90%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 17  LPPGFRFHPTDEELIAHYLL---------------------------------KKEAY-- 76
           LPPGFRFHPTDEELI HYL                                  +KE Y  
Sbjct: 20  LPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYFF 79

Query: 77  -------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
                        +RAT  GYWKATGKD+EI   K  SL+GMKKTLVFY+GRAPKG KTN
Sbjct: 80  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGK--SLVGMKKTLVFYKGRAPKGVKTN 139

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDPEPSSPSSV 172
           WVMHE+RL GK+    L   ++K+EWVI +VF+K       G+    + LDP  +     
Sbjct: 140 WVMHEYRLEGKYCIENL-PQTAKNEWVICRVFQKRA----DGTKVPMSMLDPHINRMEPA 199

[Close]

BLAST of Carg11337 vs. Swiss-Prot
Match: sp|Q9FLJ2|NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 100/238 (42.02%), Postives = 123/238 (51.68%), Query Frame = 0


Query: 17  LPPGFRFHPTDEELIAHYLLK---------------------------------KEAY-- 76
           LPPGFRFHPTDEELI HYL K                                 KE Y  
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 77  -------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQKTN 136
                        +RAT  GYWKATGKD+EI   K  SL+GMKKTLVFYRGRAPKGQKTN
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 137 WVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSS---TRKTRLDPEPSSP 196
           WVMHE+RL GKF+ H L   ++K+EWVI +VF+K+     GG     +   R+    +  
Sbjct: 136 WVMHEYRLEGKFSAHNL-PKTAKNEWVICRVFQKSA----GGKKIPISSLIRIGSLGTDF 195

Query: 197 SSVSLPPLLDSSA--DPSEHE-LHVTCFSTNNVNYPAGGGSDLSPSVFPSLLSFQENL 201
           +   LP L DSS   D ++ E ++V CFS          G+ L+    P L S Q ++
Sbjct: 196 NPSLLPSLTDSSPYNDKTKTEPVYVPCFSNQT---DQNQGTTLNCFSSPVLNSIQADI 243

[Close]

BLAST of Carg11337 vs. Swiss-Prot
Match: sp|Q9SQQ6|NAC46_ARATH (NAC domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=NAC046 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-30
Identity = 84/200 (42.00%), Postives = 108/200 (54.00%), Query Frame = 0


Query: 7   GGGHQSSDGFLPPGFRFHPTDEELIAHYLL------------------------------ 66
           GG  +  D  LPPGFRFHPTDEE+I HYL                               
Sbjct: 12  GGDQEVVD--LPPGFRFHPTDEEIITHYLKEKVFNIRFTAAAIGQADLNKNEPWDLPKIA 71

Query: 67  ---KKEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 126
              +KE Y               +RAT  GYWKATGKD+EI   K   L+GMKKTLVFY 
Sbjct: 72  KMGEKEFYFFCQRDRKYPTGMRTNRATVSGYWKATGKDKEIFRGK-GCLVGMKKTLVFYT 131

Query: 127 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRL 156
           GRAPKG+KTNWVMHE+RL GK++YH L   +++DEWV+ +VF K   +    ++ + +R+
Sbjct: 132 GRAPKGEKTNWVMHEYRLDGKYSYHNL-PKTARDEWVVCRVFHKNAPSTTITTTKQLSRI 191

[Close]

BLAST of Carg11337 vs. TrEMBL
Match: tr|A0A1S3C1U0|A0A1S3C1U0_CUCME (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.9e-83
Identity = 188/319 (58.93%), Postives = 202/319 (63.32%), Query Frame = 0


Query: 5   GSGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK--------------------------- 64
           G GG  +SSDG+LPPGFRFHPTDEELI HYLLK                           
Sbjct: 3   GGGGRQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPE 62

Query: 65  ------KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVF 124
                 KE Y               +RAT  GYWKATGKDREIMSSKTNSLIGMKKTLVF
Sbjct: 63  KALMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVF 122

Query: 125 YRGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGSS 184
           YRGRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SKDEWVIS+VFKKT    GAAMHGG+ 
Sbjct: 123 YRGRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGAAMHGGAM 182

Query: 185 TRKTRLDPEPSSPSSVSLPPLLDSSA-------------------DPSEHELHVTCFSTN 244
            +  R +PEPSSPSSVSLPPLLDSS                    D  EHELHVTCFSTN
Sbjct: 183 KKTARPNPEPSSPSSVSLPPLLDSSPYTSAAADATVSSAAYADGDDTREHELHVTCFSTN 242

Query: 245 NVNYPAGGGSDLSPSVFPSLLSFQENLQAPF-FSPVGPPLVHLLTDAAELVGCGDGPAPE 250
           N+NY +      S S FP   SFQENLQAPF  SPVGP LVHL+  AA L GCG GP PE
Sbjct: 243 NLNYCS------SASAFP---SFQENLQAPFLISPVGPSLVHLVAGAANLDGCGGGPTPE 302

[Close]

BLAST of Carg11337 vs. TrEMBL
Match: tr|A0A0A0L787|A0A0A0L787_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.7e-81
Identity = 187/319 (58.62%), Postives = 203/319 (63.64%), Query Frame = 0


Query: 7   GGGHQSSDGFLPPGFRFHPTDEELIAHYLLK----------------------------- 66
           GGG +SSDG+LPPGFRFHPTDEELI HYLLK                             
Sbjct: 4   GGGQRSSDGYLPPGFRFHPTDEELIGHYLLKKVLNSHFSSPAIAHVDLNKSEPWDLPEKA 63

Query: 67  ----KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 126
               KE Y               +RAT  GYWKATGKDREIMSSKTNSLIGMKKTLVFYR
Sbjct: 64  LMGEKEWYFFSVRDRKYPTGLRTNRATEAGYWKATGKDREIMSSKTNSLIGMKKTLVFYR 123

Query: 127 GRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKT----GAAMHGGSSTR 186
           GRAPKGQK+NWVMHEFRLAGKF+YHFLSA +SKDEWVIS+VFKKT    GA MHGG + +
Sbjct: 124 GRAPKGQKSNWVMHEFRLAGKFSYHFLSAATSKDEWVISRVFKKTGSGNGATMHGG-AMK 183

Query: 187 KTRLDPEPSSPSSVSLPPLLDSSADPS---------------------EHELHVTCFSTN 246
           KT  +PEPSSPSSVSLPPLLDSS  PS                     EHELHVTCFSTN
Sbjct: 184 KTCPNPEPSSPSSVSLPPLLDSSPYPSAAVAADATVSSAAYADGDDTREHELHVTCFSTN 243

Query: 247 NVNYPAGGGSDLSPSVFPSLLSFQENLQAPF-FSPVGPPLVHLLTDAAELVGCGDGPAPE 250
           N+NY        S S FP   SFQENLQAPF  SPVGP LVHL+ +AA L G G GP PE
Sbjct: 244 NLNY-------CSASAFP---SFQENLQAPFLISPVGPSLVHLVGEAANLDGYGGGPTPE 303

[Close]

BLAST of Carg11337 vs. TrEMBL
Match: tr|A0A2R6PTJ8|A0A2R6PTJ8_ACTCH (Protein CUP-SHAPED COTYLEDON 2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26425 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.2e-58
Identity = 151/313 (48.24%), Postives = 177/313 (56.55%), Query Frame = 0


Query: 14  DGFLPPGFRFHPTDEELIAHYLLK---------------------------------KEA 73
           DG LPPGFRFHPTDEELI +YLLK                                 KE 
Sbjct: 12  DGNLPPGFRFHPTDEELITYYLLKKVLDGNFSCRAIAEVDLNKCEPWELPEKAKMGEKEW 71

Query: 74  Y---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPKGQ 133
           Y               +RAT  GYWKATGKDREI SSKT SL+GMKKTLVFYRGRAPKG+
Sbjct: 72  YFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGE 131

Query: 134 KTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTRLDP----- 193
           KTNWVMHE+RL GKF+YH+LSA +SKDEWVIS++F+K+G+A+  G S +KTRL+P     
Sbjct: 132 KTNWVMHEYRLDGKFSYHYLSA-TSKDEWVISRLFQKSGSAVTVGVSVKKTRLNPGGINL 191

Query: 194 --EPSSPSSVSLPPLLDSS-----ADPSEHEL------HVTCFSTNNVNYPAG------- 239
             E SSPS  SLPPLLDSS      D + ++       HV CFST N  YP         
Sbjct: 192 YQEASSPSCSSLPPLLDSSPFATATDNNSYDSSAAAKEHVPCFSTTNF-YPLAPFDPIAA 251

[Close]

BLAST of Carg11337 vs. TrEMBL
Match: tr|M5X664|M5X664_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G175800 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.2e-54
Identity = 155/352 (44.03%), Postives = 182/352 (51.70%), Query Frame = 0


Query: 6   SGGGHQSSDGFLPPGFRFHPTDEELIAHYLLK---------------------------- 65
           +G     SD  LPPGFRFHPTDEELI +YLLK                            
Sbjct: 7   TGHFDHGSDTHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIAEVDLNKCEPWELPDK 66

Query: 66  -----KEAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFY 125
                KE Y               +RAT  GYWKATGKDREI SSKT +L+GMKKTLVFY
Sbjct: 67  AKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCALVGMKKTLVFY 126

Query: 126 RGRAPKGQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHGGSSTRKTR 185
           RGRAPKG+K+NWVMHE+RL GKFAYH+LS  SSKDEWVIS+VF+K+  +   G  ++KTR
Sbjct: 127 RGRAPKGEKSNWVMHEYRLEGKFAYHYLSR-SSKDEWVISRVFQKSSGSTTNGPGSKKTR 186

Query: 186 LD----------PEPSSPSSVSLPPLLDSSA-----------------DPSEHELHVTCF 245
           +           PEPSSPSSVSLPPLLDSS                  D    + HV+CF
Sbjct: 187 MSNGSTSSISLYPEPSSPSSVSLPPLLDSSPYQNMNTAGLTDRDSCSYDSPIPKEHVSCF 246

Query: 246 STN-----NVN-------------YPAGGGSDLSPSVFPSLLSFQENLQAP-FFSPV-GP 250
           STN     N++              P+ GG     S FPSL S QENLQ P FFSP+ G 
Sbjct: 247 STNPNSGFNLSSSCFDLAHAQPPPQPSFGG----VSAFPSLRSLQENLQLPFFFSPMSGH 306

[Close]

BLAST of Carg11337 vs. TrEMBL
Match: tr|A0A0A0L3C7|A0A0A0L3C7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629480 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.4e-53
Identity = 153/347 (44.09%), Postives = 184/347 (53.03%), Query Frame = 0


Query: 12  SSDGFLPPGFRFHPTDEELIAHYLLK---------------------------------K 71
           +S+  LPPGFRFHPTDEELI +YLLK                                 K
Sbjct: 16  NSNHHLPPGFRFHPTDEELITYYLLKKVLDTNFTGRAIAEVDLNKCEPWELPEKAKMGEK 75

Query: 72  EAY---------------SRATRPGYWKATGKDREIMSSKTNSLIGMKKTLVFYRGRAPK 131
           E Y               +RAT  GYWKATGKDREI S KT SL+GMKKTLVFYRGRAPK
Sbjct: 76  EWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPK 135

Query: 132 GQKTNWVMHEFRLAGKFAYHFLSADSSKDEWVISKVFKKTGAAMHG-----GSSTRKTR- 191
           G+K+NWVMHE+RL GKFAYH+LS  SSKDEWVIS+VF+K+G+   G     G S++K R 
Sbjct: 136 GEKSNWVMHEYRLEGKFAYHYLSG-SSKDEWVISRVFQKSGSGCGGATSSNGGSSKKARF 195

Query: 192 ------LDPEPSSPSSVSLPPLLDSSA-----------------------DPSEHELHVT 250
                 + PEPSSPSSVSLPPLLDSS                         P+  E HV+
Sbjct: 196 IPGSINVYPEPSSPSSVSLPPLLDSSLYSAPATGTAASGNITDRDSCSYNSPTARE-HVS 255

The following BLAST results are available for this feature:

BLAST of Carg11337 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922686.1	8.1e-130	81.48	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
XP_023552861.1	1.4e-129	81.48	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022984419.1	1.3e-127	80.13	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima]	[more]
XP_023543274.1	4.7e-85	70.04	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942010.1	1.1e-83	69.20	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]

BLAST of Carg11337 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53950.1	2.8e-44	42.21	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	1.8e-38	42.08	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G39610.1	7.8e-34	43.90	NAC domain containing protein 6	[more]
AT5G61430.1	8.6e-33	42.02	NAC domain containing protein 100	[more]
AT2G24430.1	7.3e-32	44.51	NAC domain containing protein 38	[more]

BLAST of Carg11337 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04017\|NAC98_ARATH	5.1e-43	42.21	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
sp\|Q9FRV4\|NAC54_ARATH	3.2e-37	42.08	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
sp\|Q9FKA0\|NAC92_ARATH	1.4e-32	43.90	NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 S...	[more]
sp\|Q9FLJ2\|NC100_ARATH	1.5e-31	42.02	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
sp\|Q9SQQ6\|NAC46_ARATH	2.2e-30	42.00	NAC domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=NAC046 PE=1 ...	[more]

BLAST of Carg11337 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1U0\|A0A1S3C1U0_CUCME	2.9e-83	58.93	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103496071 PE=4...	[more]
tr\|A0A0A0L787\|A0A0A0L787_CUCSA	2.7e-81	58.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G234520 PE=4 SV=1	[more]
tr\|A0A2R6PTJ8\|A0A2R6PTJ8_ACTCH	4.2e-58	48.24	Protein CUP-SHAPED COTYLEDON 2 like OS=Actinidia chinensis var. chinensis OX=159...	[more]
tr\|M5X664\|M5X664_PRUPE	8.2e-54	44.03	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G175800 PE=4 SV=1	[more]
tr\|A0A0A0L3C7\|A0A0A0L3C7_CUCSA	2.4e-53	44.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629480 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036093	NAC_dom_sf
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11337-RA	Carg11337-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 43..96 e-value: 6.4E-12 score: 46.4 coord: 18..38 e-value: 9.8E-7 score: 29.7
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 1..122 score: 27.771
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 38..126 e-value: 3.6E-27 score: 97.0
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 16..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..155
None	No IPR available	PANTHER	PTHR31744:SF22	SUBFAMILY NOT NAMED	coord: 42..174 coord: 12..39
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 42..174 coord: 12..39

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11337	Cla004290	Watermelon (97103) v1	carwmB0655
Carg11337	Csa3G234520	Cucumber (Chinese Long) v2	carcuB0675
Carg11337	MELO3C019402	Melon (DHL92) v3.5.1	carmeB0651
Carg11337	ClCG05G009250	Watermelon (Charleston Gray)	carwcgB0636
Carg11337	CSPI03G19470	Wild cucumber (PI 183967)	carcpiB0685
Carg11337	Cucsa.032500	Cucumber (Gy14) v1	carcgyB0730
Carg11337	CmaCh16G004050	Cucurbita maxima (Rimu)	carcmaB0924
Carg11337	CmaCh04G005540	Cucurbita maxima (Rimu)	carcmaB0925
Carg11337	CmoCh16G004380	Cucurbita moschata (Rifu)	carcmoB0898
Carg11337	CmoCh04G005870	Cucurbita moschata (Rifu)	carcmoB0899
Carg11337	Lsi05G001350	Bottle gourd (USVL1VR-Ls)	carlsiB595
Carg11337	Cp4.1LG14g03650	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11337	Cp4.1LG01g01680	Cucurbita pepo (Zucchini)	carcpeB0927
Carg11337	MELO3C019401.2	Melon (DHL92) v3.6.1	carmedB0661
Carg11337	CsaV3_3G019530	Cucumber (Chinese Long) v3	carcucB0687
Carg11337	Cla97C11G223820	Watermelon (97103) v2	carwmbB0680
Carg11337	Cla97C05G091580	Watermelon (97103) v2	carwmbB0681
Carg11337	Bhi01G001153	Wax gourd	carwgoB0771
Carg11337	Bhi09G002835	Wax gourd	carwgoB0772

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11337	Carg13185	Silver-seed gourd	carcarB051

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11337	Cucumber (Gy14) v2	carcgybB0650
Carg11337	Cucumber (Gy14) v2	carcgybB0653
Carg11337	Wild cucumber (PI 183967)	carcpiB0688
Carg11337	Cucumber (Chinese Long) v3	carcucB0690
Carg11337	Watermelon (Charleston Gray)	carwcgB0635