Carg12632 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12632
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase ring1
Location	Cucurbita_argyrosperma_scaffold_021 : 240452 .. 244947 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCGATCAAAGCATGAACACCCAGATACAGAATTCAATCCATCACTATCCGAATTTTGTTTAGCCTTTTTCTTTGAGAACAATGTTGATGGGTCAATTACGCCGCTCGCTTTTAAGCGCGTTTTGATTCGTTGAATGTTCTTCGTTTTCCATCCAACAATGGCGGCCGCTCCCGCAAATCGTTTTCTCTAAGAACCCCATTGGCCTCCTCCGCCTGATAATCACGTTGGTTTTCGTTTTTTCTCGCCGATTTCTGTTCATCTTAGTATCATAACGTTTTCACGATTCAAAATGAATGTTTCTGAACAGCGATATTCAATTATTTGTTTCTCAATCGTTTAGCCCTTTTCGTTGATTGTATTATGTTCTTCGTCTTACACAAGTTTTCAGATCGTTGTCTTCGATTGGATGAGTTGGAGCCGAATGTTGGAGGTTTGAATCACTGGAAGCGAACTTTGATCTTCGTCTGTTTCGTTTTATTATGCAGTTTTTCGTTTTCCCTAATTGTATGTAATGTCATTTTTGTGCTCTCTGTGCTAATCATTGGGTGATTGATCTGTTTTCTTCTGTTGCGATTGCGTTGAAATTGAAAACCCTTAGTTTGGACGAAATTATTTCCCTTTTTGTCTTGTTTGCTGATTGAACTTCTGGAACCACTCTTGAACCCTTCAAATACATGTTAGTGGGATGGAGTTTGTGTTGTTGGAGGGTTTTAGCATCAAAATTGGGGATGGATGTGTGAGATCCCGCATCGGTTGGGGAGGAGAACAAAACATTCTTCATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACTTTGAGGGGGGAAGCCTAGAAGGGGAAGCCTAGAAGGGAAAGCCTAAAGAGGACAATATGTGCTAGTGGTGTGCTTGGCTGCTACAGGACCTTGACGCGTTTGAGAATATTGTTCCCTCGGTTCTACTTTTGAAGTTCTAGGAGTTTGAACTCCTGGTGGGGCGATGGAGGGAGGTTGGAAAGGGCAGTTCATTTGGATTGAGATAAGAAAATGGTTTAGTTTGAAACAAAGAAGTGAAGTGAGGTTAGGAATGAAGTGGTAAAGGAGATATCTAATTCTGCTTATGTGATGTTCTTCTCTCTTTTAAATCTCCTCTCAACTAGGGGTTGTGAAGGGTTACGAGTAGTTGTTAATGTACAAGAGGAAACACGGACGAGGAGTGGCTCGTGACAGGTTTCATGGTGAATGAAGCGGTATCAATTGAGAATGAGAGTAAGTTTGAGATAGTACAAATATAAAACAACTTAGTTAAGAGCTTGAATACATGGCTACAAGGCTAGAAAACTATGACAATTCAGTGTGGTCGGTCTCTCAAGTCGTTTGATCATCTCTGTATAACTGGCATTGTTTTTCATATTTGATTGTGTTGAGGATTGTTCGGAGGGAGTCCCACATTGAATAATTTAGAGGATGATCATGGGTTTATAAGTAAAGAATAAATCTCCATTTGTATGAGGCCTTTTGGGGACACCCAAAGAAAAACCGTGAGAGCTTATGCTCAAAGTGGATAATATCATACCATTGTGGAGGTCCGGAGGTCCGTGATTCCTAACAGACTGAACTTCAACTTAGTTAAATATGATTCTTATTTCACTACTTGTTGAACTTCATGTTGGTTTTCCACTGTTTGTGATTTTTGCTTGCTGGTCTCGTCTCAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGAATTGTCTAGCAATAGCGTATGGTACAAGAAATCAAATTAACACGAGCTTTCTTTTACTTCAATGATAATGCTTATATGAAGTTCATACACAATTGTTTATATCAAAATGTTCTTCACATGAATGGGCATTTAGGTATCCAAATGTTTATCTCCACATGAATATTCTGCAGCGTTCGAGTATCCTTGGAGCGGCGAACGAAGGTGGTTTTCTTCAGCATTTAGTCTATTGTTTTCGGCCAATATCCGATGGAGAAGGTAAAATCAAATTTCCAAACCTTGAAGTTTATACGAGTTTATTTCCGAAGTTCAATATATTCGAGGATATTATGATTTTAGTCATGTACTGTCCTGTTCTTTTGTCTGTTTCGACGTTGGTTTGTTTTGTTTATGAGAGTTGGTTTTCCATTTTTACATTTATGTTCTGTTCCATGATGTTTGAAGTCCCTAAGACTACTCTGTTTTGGTTTATTCTAAGAAGCTTGTTAACTTTGTCGTGATTTAGATTTAGACCAATACTAAGGTTAGCATGTTGTCTGCTCAACAATTCTCAACGTAACTCAACGTAAGCACAAGGTTTAGTTTGGACGAGAACTTCGATTGATGTATCGATTGTGATAAGTTTAGTTGAAATTTCAAATGCATCGATTGATGTAAATGAGCAAGGGCTTGGAGGCATGTATTGTGTCGTATTGTTCGGATGCGACCGATAAATTGCTATGAAGTATCATAACAAATTTCTCTCTTTATATTGCACACATCATTTGTTGTATTTGCTACCATGCTTTATGTTTTTGGGCAAGACAATACAGAGCTGTCCTTAGCTGCGACAAAGTAATTGTATCCATCCCTTGTTTTAGTTCCAATTTTTATGTAAGTTGCTTTGAATAACCTTTTTAGACTTATCAAGATTTGTTAGTTAGTCGCTTGTTTGATGGCAGGAATCATCGATTACATAATTGGGATTTGGCGTTCTACTTTGGTTGGAAAATCCGAAAAGCTCAATTTTTTTGTCAAGTTATTTCTTGTAGTCAAGTAGTCTAGTCAAGTCAATATAAGTATCGATTGAACTATTTTGTATGAGTTTTGATCATTCAATAACTATGAATTTTGATTGTGTTTGATAAATTTTGAATATAAATATCTTGCTAGATATCAGATA

mRNA sequence

AATTCGATCAAAGCATGAACACCCAGATACAGAATTCAATCCATCACTATCCGAATTTTGTTTAGCCTTTTTCTTTGAGAACAATGTTGATGGGTCAATTACGCCGCTCGCTTTTAAGCGCGTTTTGATTCGTTGAATGTTCTTCGTTTTCCATCCAACAATGGCGGCCGCTCCCGCAAATCGTTTTCTCTAAGAACCCCATTGGCCTCCTCCGCCTGATAATCACGTTGGTTTTCGTTTTTTCTCGCCGATTTCTGTTCATCTTAGTATCATAACGTTTTCACGATTCAAAATGAATGTTTCTGAACAGCGATATTCAATTATTTGTTTCTCAATCGTTTAGCCCTTTTCGTTGATTGTATTATGTTCTTCGTCTTACACAAGTTTTCAGATCGTTGTCTTCGATTGGATGAGTTGGAGCCGAATGTTGGAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGAATTGTCTAGCAATAGCGTATGCGTTCGAGTATCCTTGGAGCGGCGAACGAAGGTGGTTTTCTTCAGCATTTAGTCTATTGTTTTCGGCCAATATCCGATGGAGAAGGAATCATCGATTACATAATTGGGATTTGGCGTTCTACTTTGGTTGGAAAATCCGAAAAGCTCAATTTTTTTGTCAAGTTATTTCTTGTAGTCAAGTAGTCTAGTCAAGTCAATATAAGTATCGATTGAACTATTTTGTATGAGTTTTGATCATTCAATAACTATGAATTTTGATTGTGTTTGATAAATTTTGAATATAAATATCTTGCTAGATATCAGATA

Coding sequence (CDS)

ATGAGTTGGAGCCGAATGTTGGAGATGGACATCGACTTACAAAGAATCTTGGAGGAGTTTCTTCAATCCACTGCTCATGTGATGGACAATAATGAACTGGTTGATGAACATGGTCTAAATCAATCGCCAACTTGTGCATGTTGCGAACGATTCCTAGTACTTGATAACGATGTCAGTGGTGAACCTGAAGCCATTGGTATATGTGGCGATTGTAAGTTTTTGTTACTTGAAGATATGGAATTCCGTGAACAGGATTCTTATAATAGGGCGCTGCCAAGAGGAAGAAGAACAAGGCATGGTAGTTCAGAGTCTCCTGAAAGTCGTTTTTCGCAGGAATTCTCCCATATGATTAACTTGGTGAGGCAAAGTCAGTCGAGTATCTCTAGCTACGGGGATCGGTATGCAGATGGTTCTAATGCTACTTATGCTACGCAGGACTCGAGTTTGCTTATGAGCCCCAATCAATCTAGAAGATGGCGTCGAGCAAACTCTGATTCTGAAAATGATGGTTTAGATAGTATTGACTCTATGTTTCGAGAGAGTGGATCAAATTTCAGTTTTGGGTCTTACAGACATTCTTATGGTGATATTGATTTTGTTTCGTACGGTACTTATGGGGGTGACTCGGACGCTTCCATGGATGGACGAAGTTCCTTGGACACAGATGTTTTCGTTTTTCCTGGTGATGGATTCAATGATACCGATATAGACATTGATCCTATGCGTGCTGGTGTCGGCGATTGGGACTCGAGTGATGAGGAGGAGGATCTTGGTGAATTAACAGAAGCTGACACAGAGCAAGATGCACTCGAAGTAGAATCTTCTCAATCTAGGCCTCCACTTCAAGATTTTCAAGTTTCTAGTTCTTCTGGGAGAGTTAACTCTGGTAATTGGAATGAACAACTTTCTTCACCAGAATACGAACTCGGGCGAATCAGGAGGAATGGGCGATTTTATTCGAACATGAACTATTCACAGTCGGAATTACTATCTTTCGTTGAGAATTTTGGTGAATATCTTGACCAACAAGGCTTTGAACAACTTCTTGAGCAAATTGCCATGACGACCAGCTCAAGACGCGGAGCACCTCCTGCAGCTGTCTCTTCAGTGAAAAATCTCCCACTTTTGGTGATTTCTAAAGAACATTTGAAACATGACAATATATCCTGTGCAATTTGTAAGGATTTCTTACTCGTGGGCGTCGAAGTGAATCAACTACCTTGCCTTCATCTCTACCACCCTTCCTGCATCATGCCGTGGTTGCGTACACGGAATTCGTGCCCCCTTTGTCGATATGAACTTCCAACCGACGATCGAGATTACGAAGAGGGAAAGCGAAGTAGCATCATTACAGCAGAGGTCCAAGGAGTTGGAGCAAATCTAGAGTTTAGAACCAGCCAAGGAGAGGAGCTGAACAACATAGACTCTGCAGTTAATAACAGTAACAATTCAGGCAGACACGACGGTATAAGAAGTTGGGTGTTCGTGGCTGCTCCGATCGTTGGTCTTGCAGGTATAGCCCTGATGTTATGGTTTGGTAGCCCTCGGTGTGATCAAAGAGTACCCGTAGGCCAAGTTGCAGACAGAAGGCAACTTGATGCTCACATTGCTGATGCATTGAACCAAAGAGAGAACAGAAGCAGGAGATGGTGGTGA

Protein sequence

MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSRRWW

Homology

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924889.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 541/551 (98.19%), Postives = 544/551 (98.73%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNE
Sbjct: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           LRTRNSCPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924884.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924886.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924887.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022924888.1 E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1062.8 bits (2747), Expect = 4.1e-307
Identity = 533/545 (97.80%), Postives = 537/545 (98.53%), Query Frame = 0


Query: 7   LEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 66
           + MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG
Sbjct: 8   MRMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 67

Query: 67  ICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 126
           ICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS
Sbjct: 68  ICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 127

Query: 127 ISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 186
           ISSYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS
Sbjct: 128 ISSYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 187

Query: 187 FGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 246
           FGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG
Sbjct: 188 FGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 247

Query: 247 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 306
           DWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPE
Sbjct: 248 DWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPE 307

Query: 307 YELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 366
           YEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA
Sbjct: 308 YELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 367

Query: 367 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNS 426
           VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNS
Sbjct: 368 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNS 427

Query: 427 CPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 486
           CPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR
Sbjct: 428 CPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 487

Query: 487 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 546
           HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR
Sbjct: 488 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 547

Query: 547 SRRWW 552
           SRRWW
Sbjct: 548 SRRWW 552

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924890.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 1062.4 bits (2746), Expect = 5.3e-307
Identity = 533/543 (98.16%), Postives = 536/543 (98.71%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 68
           MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC
Sbjct: 1   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 60

Query: 69  GDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 128
           GDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS
Sbjct: 61  GDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 120

Query: 129 SYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 188
           SYGDRYADGSNATYA QDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG
Sbjct: 121 SYGDRYADGSNATYAMQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 180

Query: 189 SYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 248
           SYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW
Sbjct: 181 SYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGDW 240

Query: 249 DSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYE 308
           DSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPEYE
Sbjct: 241 DSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPEYE 300

Query: 309 LGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 368
           L RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS
Sbjct: 301 LERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVS 360

Query: 369 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCP 428
           SVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNSCP
Sbjct: 361 SVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNSCP 420

Query: 429 LCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 488
           LCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD
Sbjct: 421 LCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGRHD 480

Query: 489 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 548
           GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR
Sbjct: 481 GIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENRSR 540

Query: 549 RWW 552
           RWW
Sbjct: 541 RWW 543

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_022924891.1 (uncharacterized protein LOC111432303 isoform X4 [Cucurbita moschata])

HSP 1 Score: 1003.0 bits (2592), Expect = 3.8e-289
Identity = 508/545 (93.21%), Postives = 512/545 (93.94%), Query Frame = 0


Query: 7   LEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 66
           + MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG
Sbjct: 8   MRMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIG 67

Query: 67  ICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSS 126
           ICGDCKFLLLEDMEF EQDSYNRA+PRGRRTRHGSSESPESRFSQEFSHMINL       
Sbjct: 68  ICGDCKFLLLEDMEFPEQDSYNRAMPRGRRTRHGSSESPESRFSQEFSHMINL------- 127

Query: 127 ISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 186
                              DSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS
Sbjct: 128 -------------------DSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFS 187

Query: 187 FGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 246
           FGSYRHS G IDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG
Sbjct: 188 FGSYRHSSGGIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 247

Query: 247 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 306
           DWDSSDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNEQLSSPE
Sbjct: 248 DWDSSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNEQLSSPE 307

Query: 307 YELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 366
           YEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA
Sbjct: 308 YELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAA 367

Query: 367 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNS 426
           VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGV VNQLPCLHLYHPSCIMPWLRTRNS
Sbjct: 368 VSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVAVNQLPCLHLYHPSCIMPWLRTRNS 427

Query: 427 CPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 486
           CPLCRYELPTDDRDYEEGKRSSI TAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR
Sbjct: 428 CPLCRYELPTDDRDYEEGKRSSINTAEVQGVGANLEFRTSQGEELNNIDSAVNNSNNSGR 487

Query: 487 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 546
           HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR
Sbjct: 488 HDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADALNQRENR 526

Query: 547 SRRWW 552
           SRRWW
Sbjct: 548 SRRWW 526

[Close]

BLAST of Carg12632 vs. NCBI nr
Match: XP_023517907.1 (E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 999.2 bits (2582), Expect = 5.5e-288
Identity = 512/551 (92.92%), Postives = 514/551 (93.28%), Query Frame = 0


Query: 1   MSWSRMLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSG 60
           MS SRMLEMDIDLQ ILEEFLQSTAHVMDNNELVDE GLNQSPTCACCERFLVLDNDVSG
Sbjct: 1   MSSSRMLEMDIDLQGILEEFLQSTAHVMDNNELVDERGLNQSPTCACCERFLVLDNDVSG 60

Query: 61  EPEAIGICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLV 120
           EPEAIGIC DCKFLLLEDMEF EQDSYNRALPRGRRTRHGSSES ESRFSQEFSHMINLV
Sbjct: 61  EPEAIGICSDCKFLLLEDMEFPEQDSYNRALPRGRRTRHGSSESLESRFSQEFSHMINLV 120

Query: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRE 180
           RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRW RANSDSENDGLDSIDSMFRE
Sbjct: 121 RQSQSSISSYGDRYADGSNATYATQDSSLLMSPNQSRRWHRANSDSENDGLDSIDSMFRE 180

Query: 181 SGSNFSFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240
           SGSNFSFGS                     ASMDGRSSLDTDVFVFPGDGFNDTDIDIDP
Sbjct: 181 SGSNFSFGSXXXXXXXXXXXXXXXXXXXXXASMDGRSSLDTDVFVFPGDGFNDTDIDIDP 240

Query: 241 MRAGVGDWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNE 300
           MRAGVGDWD SDEEEDLGELTEADTEQDALEVESSQ+RPPLQDFQVSS+SGRVNSGNWNE
Sbjct: 241 MRAGVGDWDLSDEEEDLGELTEADTEQDALEVESSQARPPLQDFQVSSASGRVNSGNWNE 300

Query: 301 QLSSPEYELGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360
           QLSSPEYEL RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR
Sbjct: 301 QLSSPEYELERIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRR 360

Query: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 420
           GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFL V VEVNQLPCLHLYHPSCIMPW
Sbjct: 361 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLHVSVEVNQLPCLHLYHPSCIMPW 420

Query: 421 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 480
           L TRNSCPLCRYELPTDDRDYEEGKRSSI TAEVQ VGANLEFRTSQGEELNNIDSAVNN
Sbjct: 421 LSTRNSCPLCRYELPTDDRDYEEGKRSSINTAEVQVVGANLEFRTSQGEELNNIDSAVNN 480

Query: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADAL 540
           SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVP GQ ADRRQLDAHIADAL
Sbjct: 481 SNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPGGQAADRRQLDAHIADAL 540

Query: 541 NQRENRSRRWW 552
           NQRENRSRRWW
Sbjct: 541 NQRENRSRRWW 551

[Close]

BLAST of Carg12632 vs. TAIR10
Match: AT5G01980.1 (RING/U-box superfamily protein)

HSP 1 Score: 258.5 bits (659), Expect = 9.6e-69
Identity = 203/551 (36.84%), Postives = 275/551 (49.91%), Query Frame = 0


Query: 23  STAHVMDNNELVDEHGLNQSPTCAC--CERFLVLDNDVSGEPEAIGICGDCKFLLLEDM- 82
           S  H MD +        N  P+ AC  C R +      S + E   +C DCKFLLLED  
Sbjct: 7   SNGHPMDISS-------NSIPSSACNLCGRVV---QSASDDLEIFSLCVDCKFLLLEDFG 66

Query: 83  --------EFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSISSYG 142
                                         S       SQ+F+H+I++ RQS S++ +  
Sbjct: 67  TPAPPLXXXXXXXXXXXXXXXXXXXXXXXESVGVGDLSSQQFTHLISIARQSLSTVQASE 126

Query: 143 DRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFGSYR 202
           D   D   +++ T        P+ S RW R  S+SE+D  D+    F E+ SN SF  YR
Sbjct: 127 DLRDDLRTSSHTT--------PSGSTRW-RLFSESESDDFDN----FGETESNASFSLYR 186

Query: 203 HSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFN-DTDIDIDPMRAGVGDWDS 262
             + D D +S+  YGG+SDAS D  +    D+FV P D  + D D DIDPMRAG+  W+S
Sbjct: 187 FPHADNDTISFSAYGGESDASTDRHA----DIFVQPDDRSDIDFDTDIDPMRAGLNQWNS 246

Query: 263 SDE----EEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 322
            +E    EE  G    A T         S+S   +  F                   SPE
Sbjct: 247 DEEDREWEEGAGPSGVAGTRYRNYLASPSESYSSMTRF------------------DSPE 306

Query: 323 YELG---RIRRNGRFYSNMNYSQSELLSF---VENFGEYLDQQGFEQLLEQIAMTTSSRR 382
            E     RI       S   ++  E L F     N G+YLD++GF++LLEQ+A + +SRR
Sbjct: 307 LERSFRQRIIERRHSLSRNIFTGLEDLDFSPYAANVGDYLDERGFDELLEQLAESDNSRR 366

Query: 383 GAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPW 442
           GAPPA+VS V+NLP ++I++EH+    + CAICK+   +  E  QLPCLHLYH  CI+PW
Sbjct: 367 GAPPASVSCVRNLPRVIIAEEHVM-KGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPW 426

Query: 443 LRTRNSCPLCRYELPTDDRDYEEGKRSSIITAEVQGVGANLEFRTSQGEELNNIDSAVNN 502
           L  RNSCPLCRYELPTDD+DYEEGKR+ +   +V    ++ +  T  GEE   ++   + 
Sbjct: 427 LSARNSCPLCRYELPTDDKDYEEGKRNVL---DVSEDSSSSDDGTESGEE-EYVERGESE 486

Query: 503 SNNSGRHDGIRSWVFV-AAPIVGLAGIALMLWFGSPRCDQRVPVGQVADRRQLDAHIADA 551
           S  S    G   W+F+ AAP+V L G+ L +W  SP             RR     IA +
Sbjct: 487 SGVSRVSRG--RWLFLAAAPVVSLVGVVLAMWLSSPH------------RR----GIAIS 489

[Close]

BLAST of Carg12632 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-28
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           NFG+Y    G EQL++Q+A    +R G PPA+ S++  LP + ++K+ LK +   CA+C 
Sbjct: 161 NFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCM 220

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSS 449
           D    G +V Q+PC H++H  C++PWL   NSCP+CR+ELPTDD DYE   + S
Sbjct: 221 DEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGS 274

[Close]

BLAST of Carg12632 vs. TAIR10
Match: AT3G02340.1 (RING/U-box superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-25
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 327 SELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHD 386
           S L  F EN   + D    + +L Q+    +  RG PPAA S +++LP++ ++ E L   
Sbjct: 275 SGLDEFDENHSGHYDA---DAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKG 334

Query: 387 NISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKR 446
           N  CA+CKD +LV  +V +LPC H YH  CI+PWL  RN+CP+CRYELPTDD +YE  K 
Sbjct: 335 NNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYERHKS 392

Query: 447 S 448
           S
Sbjct: 395 S 392

[Close]

BLAST of Carg12632 vs. TAIR10
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-24
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 343 QGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVE 402
           Q ++ L EQ A    S  G PP + S + NLP++++  E+     + CA+CKD + +G +
Sbjct: 262 QDYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNK 321

Query: 403 VNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGK 446
             QLPC H YH  CI+PWL+ RN+CP+CRYELPTDD +YE+ K
Sbjct: 322 AVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRK 364

[Close]

BLAST of Carg12632 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-23
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 0


Query: 249 DSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEYE 308
           DS DE E L  L EAD + +++ V S  +   L+D  +S   G  N G W   L+S   E
Sbjct: 238 DSDDEREVLSVLAEAD-DNNSVSV-SVAATISLEDLAISERRGSSNLG-WEVLLNSRSLE 297

Query: 309 LGRIRRNGRFYSNMNYSQSELLSFV-------ENFGEYLDQQGFEQLLEQIAMTTSSRRG 368
                       N++ ++S L  ++       E++ +YL    +E L E      SS  G
Sbjct: 298 F-----------NLDDAESNLELYIGDIDHEEEDYEDYLHTTEYEMLFE---AEISSGIG 357

Query: 369 APPAAVSSVKNLPLLVISKEHLKH---DNISCAICKDFLLVGVEVNQLPCLHLYHPSCIM 428
            PPA+ S +KNL +  +S E +     D + CA+CK+ ++VG EV +LPC H YH  CI+
Sbjct: 358 KPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIV 417

Query: 429 PWLRTRNSCPLCRYELPTD 438
           PWL  RN+CP+CR+ELP+D
Sbjct: 418 PWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of Carg12632 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.3e-27
Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           N G+Y    G EQL++Q+A    +R G PPA+ S+++ LPL+ I+K +L  +   CA+C 
Sbjct: 169 NIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCM 228

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSS 449
           D    G E  Q+PC HLYH  C++PWL   NSCP+CR+ELPTDD DYE   R +
Sbjct: 229 DDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA 282

[Close]

BLAST of Carg12632 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 5.1e-27
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           NFG+Y    G EQL++Q+A    +R G PPA+ S++  LP + ++K+ LK +   CA+C 
Sbjct: 161 NFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCM 220

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSS 449
           D    G +V Q+PC H++H  C++PWL   NSCP+CR+ELPTDD DYE   + S
Sbjct: 221 DEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGS 274

[Close]

BLAST of Carg12632 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.0e-22
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 335 NFGEYLDQQGFEQLLEQIAMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICK 394
           N G+Y    G E+L EQ++  T +RRG PPA  S++  LP + I++ HL+  + +C +CK
Sbjct: 136 NTGDYFFGPGLEELFEQLSAGT-TRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCK 195

Query: 395 DFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPT 437
           D   +G E  Q+PC H+YH  CI+PWL   NSCP+CR ELP+
Sbjct: 196 DEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPS 236

[Close]

BLAST of Carg12632 vs. Swiss-Prot
Match: sp|Q9SNB6|RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.2e-21
Identity = 68/196 (34.69%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 311 RIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSS-----RRGAPPA 370
           R RR   FY + + S S L    ++  E L   GFE+LLEQ++   +S     R G PPA
Sbjct: 133 RERRAYEFYYD-DGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPA 192

Query: 371 AVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRN 430
           + S++++LP + IS  H K +  +CA+C +    G+E  ++PC H++H  CI+PWL  RN
Sbjct: 193 SKSAIESLPRVEISDCHTKAE-ANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRN 252

Query: 431 SCPLCRYELPTD--DRDYEEGKRSSIITAEVQGVG---ANLEFRTSQGEELNNIDSAVNN 490
           SCP+CR+ELP+D   R  EE     +    + G G           +GE +  +     +
Sbjct: 253 SCPVCRFELPSDPIQRSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERILPVVLTEMD 312

Query: 491 SNNSGRHDGIR--SWV 495
               G ++G R  SWV
Sbjct: 313 GGGLGSNEGPRRISWV 326

[Close]

BLAST of Carg12632 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.2e-21
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 338 EYLDQQGFEQLLEQIAM----TTSSRRGA--PPAAVSSVKNLPLLVISKEHLKHDNIS-C 397
           E+L   GF++LL+QI+     T  + R    PPA+ S+++ LPL+ I   HL  D+ S C
Sbjct: 142 EFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHC 201

Query: 398 AICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGKRSSII 456
           A+CK+  ++     ++PC H+YHP CI+PWL  RNSCP+CR+ELP +D     G   + +
Sbjct: 202 AVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAV 261

[Close]

BLAST of Carg12632 vs. TrEMBL
Match: tr|A0A1S3CIY7|A0A1S3CIY7_CUCME (uncharacterized protein LOC103501491 OS=Cucumis melo OX=3656 GN=LOC103501491 PE=4 SV=1)

HSP 1 Score: 744.6 bits (1921), Expect = 1.6e-211
Identity = 400/563 (71.05%), Postives = 446/563 (79.22%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHV-MDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGI 68
           MDIDLQRILEEF QS  HV M++N+ VDEH   Q PTCA C+R  VLD+D + EPE I I
Sbjct: 1   MDIDLQRILEEFPQSAVHVIMNSNQRVDEHSPIQLPTCAFCQR--VLDSDATSEPEPIDI 60

Query: 69  CGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSI 128
           CGDCKFLLLED+E   +DSY+R  PRGRRT   SSESPE+ FSQEF+HMINLVRQ QSSI
Sbjct: 61  CGDCKFLLLEDIETPVRDSYHRMTPRGRRTMRSSSESPENLFSQEFTHMINLVRQRQSSI 120

Query: 129 SSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSF 188
           SS+GDRYADGSNA    Q SS   +PNQSRRWR+  SDSENDGLDS DSMF ES SNFSF
Sbjct: 121 SSHGDRYADGSNAVDFMQHSSSHTTPNQSRRWRQVYSDSENDGLDSFDSMFGESESNFSF 180

Query: 189 GSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVGD 248
           G YRHSYGD D VS  TYGGDSDAS+DG S LDTD+F+ PG+G +DT  DIDPMRAG+G+
Sbjct: 181 GPYRHSYGDSDVVSNRTYGGDSDASLDGHSFLDTDIFILPGEG-SDTXXDIDPMRAGIGN 240

Query: 249 WDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEY 308
           WDSSDEE+D GE TEA+TEQ   E+ SS++RP LQ+  VSS+S R NS NW EQLSSPEY
Sbjct: 241 WDSSDEEDDHGEFTEAETEQ---EIGSSEARPQLQNSNVSSASRRGNSSNWTEQLSSPEY 300

Query: 309 E---LGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPP 368
           E    G IRRN RFYS  NY+QSELLS+V + G+YLD+QGFE LLEQIA TTSSRRGAPP
Sbjct: 301 EGSTPGHIRRNRRFYSITNYAQSELLSYVGDSGDYLDRQGFEDLLEQIAETTSSRRGAPP 360

Query: 369 AAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTR 428
           AAVS VKNLP LVISKEHLKHD+ISCAICKDFLLVGVEVNQLPCLHLYHP+CI+PWL  R
Sbjct: 361 AAVSFVKNLPRLVISKEHLKHDSISCAICKDFLLVGVEVNQLPCLHLYHPTCILPWLSAR 420

Query: 429 NSCPLCRYELPTDDRDYEEGKRSSIITAE----------------VQGVGANLEFRTSQG 488
           NSCPLCRYELPTDDRDYEE KRSSI TA                 + GVGAN EF +SQ 
Sbjct: 421 NSCPLCRYELPTDDRDYEEVKRSSINTAATHALQPWVVGLENPSGLNGVGANSEFESSQE 480

Query: 489 EELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQVAD 548
           E+  NIDSAV +SNNSGR  G R W+FVAAPIVGL GIALMLWFG+P CDQRVP GQ+ D
Sbjct: 481 EDYRNIDSAVISSNNSGR-GGRRRWLFVAAPIVGLVGIALMLWFGNPLCDQRVPGGQLTD 540

Query: 549 RRQLDAHIADALNQRENRSRRWW 552
            RQLDA  A++ NQRENR+RRWW
Sbjct: 541 GRQLDARSAESSNQRENRTRRWW 556

[Close]

BLAST of Carg12632 vs. TrEMBL
Match: tr|A0A0A0L2Z4|A0A0A0L2Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337330 PE=4 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 6.8e-210
Identity = 402/565 (71.15%), Postives = 443/565 (78.41%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHV-MDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGI 68
           MDIDLQRILEEF QS  HV M+NN+ VDEH   Q PTCA C+R LV D+D   EPE I I
Sbjct: 1   MDIDLQRILEEFPQSNVHVIMNNNQRVDEHSPIQLPTCAFCQRVLVPDSDAPSEPEPIDI 60

Query: 69  CGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSI 128
           CGDCKFLLLED+E   +DSY+R  PRGRR    SSESPE+ FSQEF+HMIN+VRQ QSSI
Sbjct: 61  CGDCKFLLLEDIETPVRDSYHRMTPRGRRAMRSSSESPENLFSQEFTHMINMVRQRQSSI 120

Query: 129 SSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSF 188
           SS+GDRYADGSNA    Q SS   +PNQSRRWR+  SDSENDGLDS DSMF ES SNFSF
Sbjct: 121 SSHGDRYADGSNAMDFMQHSSSHTTPNQSRRWRQVYSDSENDGLDSFDSMFEESESNFSF 180

Query: 189 GSYRHSYGDIDFVSYGTYGGDSDASM-DGRSSLDTDVFVFPGDGFNDTDIDIDPMRAGVG 248
           G YRHSYGD D VS  TYGG+SD S+ DG S LDTDVF+ PG+G +DTD DIDPMRAGVG
Sbjct: 181 GPYRHSYGDSDVVSNRTYGGESDVSLDDGHSFLDTDVFILPGEG-SDTDTDIDPMRAGVG 240

Query: 249 DWDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPE 308
            WDSSDEE+D GE TEA+TEQ   EV SS++RP LQ+F VSS+S R NS NWNEQLSSPE
Sbjct: 241 HWDSSDEEDDHGEFTEAETEQ---EVGSSEARPQLQNFHVSSASRRGNSSNWNEQLSSPE 300

Query: 309 YE---LGRIRRNGRFYSNMNYSQSELLSFVENFGEYLDQQGFEQLLEQIA-MTTSSRRGA 368
           YE    G IRRN RFYS  NY+QSELLS+V + G+YLD+QGFE+LLEQIA  TTSSRRGA
Sbjct: 301 YEGSTPGHIRRNRRFYSITNYAQSELLSYVGDSGDYLDRQGFEELLEQIAETTTSSRRGA 360

Query: 369 PPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLR 428
           PPAAVS VKNLP LVISKEHLKHD+ISCAICKDFL +GVEVNQLPCLHLYHPSCI+PWL 
Sbjct: 361 PPAAVSFVKNLPRLVISKEHLKHDSISCAICKDFLHLGVEVNQLPCLHLYHPSCILPWLS 420

Query: 429 TRNSCPLCRYELPTDDRDYEEGKRSSIITAEV----------------QGVGANLEFRTS 488
            RNSCPLCRYELPTDDRDYEE K+SSI  A V                 GVGAN EF TS
Sbjct: 421 ARNSCPLCRYELPTDDRDYEEVKQSSINAAAVHGLQPRVVGLENPSGLNGVGANPEFETS 480

Query: 489 QGEELNNIDSAVNNSNNSGRHDGIRSWVFVAAPIVGLAGIALMLWFGSPRCDQRVPVGQV 548
           Q E+  NIDSAV +SNNSGR    R W+FVAAPIVGL GIALMLWFG+P CDQRV  GQ+
Sbjct: 481 QEEDQRNIDSAVISSNNSGR-GARRRWLFVAAPIVGLVGIALMLWFGNPLCDQRVSGGQL 540

Query: 549 ADRRQLDAHIADALNQRENRSRRWW 552
            D RQLDAH A++ NQRENRSRRWW
Sbjct: 541 TDGRQLDAHSAESSNQRENRSRRWW 560

[Close]

BLAST of Carg12632 vs. TrEMBL
Match: tr|A0A2N9FU14|A0A2N9FU14_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18331 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 9.4e-119
Identity = 257/572 (44.93%), Postives = 345/572 (60.31%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 68
           MD D  R  E+  QSTA    ++ L+ +H + Q   C+ C+R L  +N+ SG+ E +GIC
Sbjct: 1   MDADTPRTSEQLPQSTALGCMDSGLIADHSV-QPAACSLCQRILSPENEASGDLETVGIC 60

Query: 69  GDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 128
           GDCKFL  ED     QDS+    PRGRRTR+ SSES E+ FSQE SH+INL RQ+QS++S
Sbjct: 61  GDCKFLFFEDRGTPRQDSFQHRAPRGRRTRYSSSESVENLFSQELSHVINLARQNQSTVS 120

Query: 129 SYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 188
            Y D+ +DG  +    Q SS   +P+ SR WRR  SD+E+DG D +DS++ ES SN SFG
Sbjct: 121 GYEDQPSDGDTSNRLLQHSSSRSTPSGSRIWRRVLSDTESDGFDHLDSLYGESESNVSFG 180

Query: 189 SYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDG-FNDTDIDIDPMRAGVGD 248
            +R  +G+ D +S+  YGGDSDAS+DG S +D ++FV P +G   ++D DIDPM AG+  
Sbjct: 181 QFRVFHGESDAISFSAYGGDSDASVDGHSVMDPEMFVQPDEGSIFESDTDIDPMHAGLNQ 240

Query: 249 WDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEY 308
           WDS                     ++++++    Q F  S              + SPE 
Sbjct: 241 WDSXXXXXXXXXXXXXXXXXXXXXIDTAEAIAQYQTFFTSEG-----------PIWSPE- 300

Query: 309 ELGRIRRNGRFYSN---MNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPP 368
                 +  R Y +    N  + EL  +V N G+YLD +GFE+LL  +A T SSRRGAPP
Sbjct: 301 ------QGTRTYIHTIFANSEEEELPPYVRNSGDYLDARGFEELLVHLAETESSRRGAPP 360

Query: 369 AAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTR 428
           AAVS V +LP +VI++EH KH++++CAICK+ L +G EVNQLPC HLYHPSCI+PWL TR
Sbjct: 361 AAVSFVDSLPCVVINEEHEKHEDLACAICKEVLSIGTEVNQLPCFHLYHPSCILPWLSTR 420

Query: 429 NSCPLCRYELPTDDRDYEEGKRSSIITAEVQGV-----------------GANLEFRTSQ 488
           NSCPLCRYELPTDD+DYEEGK+++    E+  +                  A+ E   +Q
Sbjct: 421 NSCPLCRYELPTDDKDYEEGKQNNSGRVEIHEMQQENVSEDSSSDVFDEAEADEERELNQ 480

Query: 489 G----EELNNIDSAVNNSNNSGRHDGIRSWVFV-AAPIVGLAGIALMLWFGSPRCDQRVP 548
           G     EL ++D A   +N+SGR  G   W+F+ AAPIVGL GI L+LW G+P   +R  
Sbjct: 481 GRTEQRELLDVDPA---TNSSGREGGRGRWLFLAAAPIVGLVGIVLVLWLGNPLVQRRGN 540

Query: 549 VGQVA--DRRQLDAHI-ADALNQRENRSRRWW 552
             Q +  +R     HI A +  QRENRSRRWW
Sbjct: 541 TSQCSFVERGNHQIHISASSPTQRENRSRRWW 550

[Close]

BLAST of Carg12632 vs. TrEMBL
Match: tr|A5BWM7|A5BWM7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040928 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 264/573 (46.07%), Postives = 348/573 (60.73%), Query Frame = 0


Query: 6   MLEMDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAI 65
           + EMD D + + +E  QST     N++ +  H  +    CA C++ L+ D++ +GE E I
Sbjct: 76  LFEMD-DSRSVPQELSQSTVPNSSNSDSLLNHS-DLPAACALCQKILLPDDEGTGELEPI 135

Query: 66  GICGDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQS 125
            +CGDCKFL LED+    QDS+ R  PR RRTR+ SSES E+ FSQ FSHMINLVRQ+QS
Sbjct: 136 SMCGDCKFLFLEDLRSPAQDSHWRRPPRVRRTRYSSSESIENLFSQHFSHMINLVRQNQS 195

Query: 126 SISSYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNF 185
           ++S + D+  D        Q  S   +P+ SRRWRR  SD+E+DG D++DS++ ES SN 
Sbjct: 196 TVSGHEDQLVDVDPGARLLQRPSSRTTPSGSRRWRRVPSDTESDGFDNLDSLYGESESNI 255

Query: 186 SFGSYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDGFN-DTDIDIDPMRAG 245
           S+G YR   G+ D +S+  YGGDSDAS+DG S LDT+++V P DG N ++D DIDPM A 
Sbjct: 256 SYGGYRLFNGESDAISFSAYGGDSDASVDGHSFLDTEMYVQPDDGSNLNSDTDIDPMHAR 315

Query: 246 VGDWDSSDEEEDLGELTEADTEQDALE-----VESSQSRPPLQDFQVSSSSGRVNSGNWN 305
           +  W+S D                        VES+++    ++F  SSS+G     N  
Sbjct: 316 LSQWNSDDXXXXXXXXXXXXXXXXXXXXXXXVVESAEAEVHPRNFFPSSSNGNNVLVNMR 375

Query: 306 EQLSSPEYELGRI---RRNGR--FYSNM--NYSQSELLSFVENFGEYLDQQGFEQLLEQI 365
            ++ SPE+ LG I    R GR  F SN   N  +SE+L +  N  +YLD +GFE+ LE +
Sbjct: 376 RRIHSPEF-LGAIPWRLREGRQTFISNFFSNLDESEVLPYFGNSEDYLDARGFEEFLEHL 435

Query: 366 AMTTSSRRGAPPAAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLY 425
           A T SSRRGAPPAAVS V +LP +VI++EH K D + CAICKD L VG EVNQLPC HLY
Sbjct: 436 AETDSSRRGAPPAAVSFVNSLPRVVINEEHEKRDGLVCAICKDVLSVGTEVNQLPCFHLY 495

Query: 426 HPSCIMPWLRTRNSCPLCRYELPTDDRDYEEGK-RSSIITAEVQGVGANLEFRTSQGEEL 485
           HP CI+PWL  RNSCPLCRYELPTDD+DYEEGK  +SI     Q +  +    T+ G E 
Sbjct: 496 HPYCILPWLTARNSCPLCRYELPTDDKDYEEGKLNASIHEIPQQDLSDDSSSDTTDGAEA 555

Query: 486 NN----------IDSAVNNSNNSGRHDGIRSWVFV-AAPIVGLAGIALMLWFGSPRCDQR 545
           ++          +   V   N S R  G   W F+ AAPI GL G+AL+LW   P  D+R
Sbjct: 556 DDTCEISPECRELADEVPVRNGSDREGGRGRWFFLAAAPIAGLVGMALVLWLRIPVTDRR 615

Query: 546 VPVGQ--VADRRQLDAHIADALNQRENRSRRWW 552
             +G+  +  + QL +  +   NQRENRSRRWW
Sbjct: 616 GAIGRSNIQGQTQLHSSGSSLPNQRENRSRRWW 645

[Close]

BLAST of Carg12632 vs. TrEMBL
Match: tr|A0A2P4LI60|A0A2P4LI60_QUESU (E3 ubiquitin-protein ligase ring1 OS=Quercus suber OX=58331 GN=CFP56_18420 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.5e-116
Identity = 254/569 (44.64%), Postives = 330/569 (58.00%), Query Frame = 0


Query: 9   MDIDLQRILEEFLQSTAHVMDNNELVDEHGLNQSPTCACCERFLVLDNDVSGEPEAIGIC 68
           MD D  RI E+  QS AH   N+ L+ +H + Q   C  C+R L  +N+ SG+ + IGIC
Sbjct: 1   MDADTPRIPEQLPQSNAHGRINSGLIVDHSV-QPAACGLCQRILSPENEASGDLQTIGIC 60

Query: 69  GDCKFLLLEDMEFREQDSYNRALPRGRRTRHGSSESPESRFSQEFSHMINLVRQSQSSIS 128
           GDCKFL+ ED     QDSY R   RGRRTRH SSES E  FSQE SH+IN  RQ+QSS+S
Sbjct: 61  GDCKFLIFEDHRTPRQDSYQRRASRGRRTRHSSSESVEYLFSQELSHLINQARQNQSSVS 120

Query: 129 SYGDRYADGSNATYATQDSSLLMSPNQSRRWRRANSDSENDGLDSIDSMFRESGSNFSFG 188
            Y D+ +DG  +    Q SS   +P+ SR WRR  SD+E+DG D  DS++ ES SN SFG
Sbjct: 121 GYEDQTSDGDASVRLLQHSSSRSTPSGSRIWRRVPSDTESDGFDHPDSLYGESESNVSFG 180

Query: 189 SYRHSYGDIDFVSYGTYGGDSDASMDGRSSLDTDVFVFPGDG-FNDTDIDIDPMRAGVGD 248
            YR  +G+ D +S+  YGGDSDAS+DG S LD ++ V P DG   ++D DIDPM AG+  
Sbjct: 181 QYRVFHGESDAISFSAYGGDSDASVDGHSFLDREMSVQPDDGSVFESDTDIDPMHAGLDQ 240

Query: 249 WDSSDEEEDLGELTEADTEQDALEVESSQSRPPLQDFQVSSSSGRVNSGNWNEQLSSPEY 308
           WDS                                                N+     E 
Sbjct: 241 WDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYE-----NQTFFPSEA 300

Query: 309 ELGRIRRNGRFYSN---MNYSQSELLSFVENFGEYLDQQGFEQLLEQIAMTTSSRRGAPP 368
            + R R+  + +      N  + EL  +V N G+YLD +GF++LL  +A T SSRRGAPP
Sbjct: 301 LIWRGRQGSQTFIRTIFANSEEEELPPYVRNSGDYLDARGFDELLVHLAETESSRRGAPP 360

Query: 369 AAVSSVKNLPLLVISKEHLKHDNISCAICKDFLLVGVEVNQLPCLHLYHPSCIMPWLRTR 428
           AA+S V +LP +VI++EH K++ ++CAICK+ L +G EVNQLPC HLYHPSCI+PWL TR
Sbjct: 361 AAMSFVNSLPRVVINEEHQKNEGLACAICKEVLPIGTEVNQLPCFHLYHPSCILPWLSTR 420

Query: 429 NSCPLCRYELPTDDRDYEEGKRSS--------IITAEVQGVGANLEFRTSQGEELNNIDS 488
           NSCPLCRYELPTDD+DYEEGK+++        I    V   G+++ F  ++ +E   ++ 
Sbjct: 421 NSCPLCRYELPTDDKDYEEGKQNNSGGVENHEIQQENVSDDGSSVVFDEAESDEERELNQ 480

Query: 489 AVN----------NSNNSGRHDGIRSWVFV-AAPIVGLAGIALMLWFGSPRCDQRVPVGQ 548
                         SN+SGR  G   W F+ AAPIVGL GI L+LW G+P   +R P  Q
Sbjct: 481 GRTEQRELLDVDPTSNSSGREGGRGRWFFLAAAPIVGLMGIVLVLWLGNPLIQRREPASQ 540

Query: 549 VA--DRRQLDAHI-ADALNQRENRSRRWW 552
            +  D      HI A +  QRENRSRRWW
Sbjct: 541 CSFVDPGHHQIHISASSPTQRENRSRRWW 563

The following BLAST results are available for this feature:

BLAST of Carg12632 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924889.1	0.0e+00	98.19	E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita moschata]	[more]
XP_022924884.1	4.1e-307	97.80	E3 ubiquitin-protein ligase Praja-2-like isoform X1 [Cucurbita moschata] >XP_022...	[more]
XP_022924890.1	5.3e-307	98.16	E3 ubiquitin-protein ligase Praja-2-like isoform X3 [Cucurbita moschata]	[more]
XP_022924891.1	3.8e-289	93.21	uncharacterized protein LOC111432303 isoform X4 [Cucurbita moschata]	[more]
XP_023517907.1	5.5e-288	92.92	E3 ubiquitin-protein ligase Praja-2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12632 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01980.1	9.6e-69	36.84	RING/U-box superfamily protein	[more]
AT3G19950.1	2.8e-28	45.61	RING/U-box superfamily protein	[more]
AT3G02340.1	5.0e-25	46.28	RING/U-box superfamily protein	[more]
AT5G08139.1	1.1e-24	46.60	RING/U-box superfamily protein	[more]
AT5G60820.1	1.2e-23	36.68	RING/U-box superfamily protein	[more]

BLAST of Carg12632 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CH30\|RING1_GOSHI	2.3e-27	47.37	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|Q8LPN7\|RNG1L_ARATH	5.1e-27	45.61	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|O22197\|RHC1A_ARATH	5.0e-22	46.08	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q9SNB6\|RDUF1_ARATH	3.2e-21	34.69	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
sp\|O22283\|RHC2A_ARATH	4.2e-21	40.80	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Carg12632 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CIY7\|A0A1S3CIY7_CUCME	1.6e-211	71.05	uncharacterized protein LOC103501491 OS=Cucumis melo OX=3656 GN=LOC103501491 PE=...	[more]
tr\|A0A0A0L2Z4\|A0A0A0L2Z4_CUCSA	6.8e-210	71.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337330 PE=4 SV=1	[more]
tr\|A0A2N9FU14\|A0A2N9FU14_FAGSY	9.4e-119	44.93	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18331 PE=4 SV=1	[more]
tr\|A5BWM7\|A5BWM7_VITVI	3.0e-117	46.07	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040928 PE=4 SV=1	[more]
tr\|A0A2P4LI60\|A0A2P4LI60_QUESU	7.5e-116	44.64	E3 ubiquitin-protein ligase ring1 OS=Quercus suber OX=58331 GN=CFP56_18420 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12632-RA	Carg12632-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 390..430 e-value: 1.2E-5 score: 34.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 389..431 e-value: 3.2E-10 score: 40.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 390..431 score: 11.781
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 365..441 e-value: 5.0E-17 score: 62.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..300
None	No IPR available	PANTHER	PTHR44679	FAMILY NOT NAMED	coord: 332..457
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 389..431 e-value: 3.28113E-20 score: 83.5212
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 378..438

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12632	Cla012056	Watermelon (97103) v1	carwmB0273
Carg12632	Csa4G337330	Cucumber (Chinese Long) v2	carcuB0312
Carg12632	MELO3C025263	Melon (DHL92) v3.5.1	carmeB0283
Carg12632	ClCG04G006120	Watermelon (Charleston Gray)	carwcgB0274
Carg12632	CSPI04G16850	Wild cucumber (PI 183967)	carcpiB0317
Carg12632	Cucsa.130800	Cucumber (Gy14) v1	carcgyB0331
Carg12632	CmaCh07G011960	Cucurbita maxima (Rimu)	carcmaB0398
Carg12632	CmaCh03G002720	Cucurbita maxima (Rimu)	carcmaB0396
Carg12632	CmoCh07G012400	Cucurbita moschata (Rifu)	carcmoB0395
Carg12632	CmoCh03G002840	Cucurbita moschata (Rifu)	carcmoB0393
Carg12632	Lsi01G016400	Bottle gourd (USVL1VR-Ls)	carlsiB258
Carg12632	Cp4.1LG10g07330	Cucurbita pepo (Zucchini)	carcpeB0399
Carg12632	Cp4.1LG19g01650	Cucurbita pepo (Zucchini)	carcpeB0400
Carg12632	CsGy4G016170	Cucumber (Gy14) v2	carcgybB0298
Carg12632	MELO3C025263.2	Melon (DHL92) v3.6.1	carmedB0295
Carg12632	CsaV3_4G027440	Cucumber (Chinese Long) v3	carcucB0316
Carg12632	Cla97C04G072680	Watermelon (97103) v2	carwmbB0290
Carg12632	Bhi03G001794	Wax gourd	carwgoB0372

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12632	Carg05907	Silver-seed gourd	carcarB021
Carg12632	Carg19539	Silver-seed gourd	carcarB319

The following block(s) are covering this gene:

None