Carg05907 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05907
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase RING1-like
Location	Cucurbita_argyrosperma_scaffold_026 : 198036 .. 199331 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTTCTCTATTCCTAAACTTCATCTTCAACCTAACATGCCTCTTCCTGATCAACCCCGCTCCGATTCTCCTTCTCCGGTGCCGTCGATCACATCCTTCCGCCGCGACGAAGTCCCCAACCCCATGGATTTCAACCCTTTTGCCACCGTCCCCTCCATCGTCGCTCCTCCCGACGATTCCCTCCGTTTTGAGACCGATTGGTTCTCCGACACGGATTCCGACTCCGAACGCCATGTCAGTTGCTTGGTGACTGATCTTTTTGAGAATCATCGCTTCACCGATCATTTACTCGCTCTCAGCAATCACGATCATGATCTGGATTCTGGGCCGGACCCATTTACGCATTCTGCAAACGACTTGGGCATTTCGGGGTTTGAAGATAGCGGTGACATTGAATCTAACTATACTGAGGAGCTGTGGTCGACGTTTGCTGTGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCAAGTTGCGGATTCGATTAACAGTGACCTTCGGGTTGTTGATGTAGATTCGGACTCGGATTATGATAATGGAATTATCGGTGCTCTGCAATTTGTGACAGGGGATGATGGCGAAAATGATGTTAATTGGGTTGAAAGTCCGAATCCTCTCTCAGATAACTTCAGCTTTTGTTTTCAGCAGAGGAATTCGTACGAGGATTTTGAATGGGAGGAGGTTGAGGAACGGGTGGACGAAAGGGAAATTTCGAGCGTAGTGGTGGAGGGAGCCGAGGAATTGACCATTGCATCTGGTTTTTCCAATGATGAAGAATCAGGAGAAGAGGCGGGCCGATGGGAAATTTTATTGGTAATGGACGACATTGGGAGCAATACGAATTGGGAACGGGATAATGATGCTGAGGCGTACGTAGCCGACCAGGATGATTACATGTATGCAGCAGAATATGATACCCTTTTTGGACAATTCGTTGAAAATGAGAACGCTTTGAAGGGTTGTCCTCCAGCAGCTAAGAGTGCTATGGAGAATCTTCCTCTGGTTGAGTTAAAAACAGAGAATATACTGACAGAGGAAGTGGTTATTTGTGCTGTTTGTAAGGATAAATTTTCAATGGAGGAGAAGGTGAGGAAGCTTCCTTGCTGCCACTATTACCATGATGATTGCATTCTGCCATGGCTGAATATCCGAAACACATGTCCTGTTTGTCGGTATGAGTTGCCCACCGACGATCCAGATTATGAGCGTAGGAAGAGTCAGAGGGCCAGTGGTGGCCAGCAAACGGATTTGCAGGTCAGGTACAATTTTGAACTAATAGCTTAA

mRNA sequence

ATGGCTTTTTTCTCTATTCCTAAACTTCATCTTCAACCTAACATGCCTCTTCCTGATCAACCCCGCTCCGATTCTCCTTCTCCGGTGCCGTCGATCACATCCTTCCGCCGCGACGAAGTCCCCAACCCCATGGATTTCAACCCTTTTGCCACCGTCCCCTCCATCGTCGCTCCTCCCGACGATTCCCTCCGTTTTGAGACCGATTGGTTCTCCGACACGGATTCCGACTCCGAACGCCATGTCAGTTGCTTGGTGACTGATCTTTTTGAGAATCATCGCTTCACCGATCATTTACTCGCTCTCAGCAATCACGATCATGATCTGGATTCTGGGCCGGACCCATTTACGCATTCTGCAAACGACTTGGGCATTTCGGGGTTTGAAGATAGCGGTGACATTGAATCTAACTATACTGAGGAGCTGTGGTCGACGTTTGCTGTGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCAAGTTGCGGATTCGATTAACAGTGACCTTCGGGTTGTTGATGTAGATTCGGACTCGGATTATGATAATGGAATTATCGGTGCTCTGCAATTTGTGACAGGGGATGATGGCGAAAATGATGTTAATTGGGTTGAAAGTCCGAATCCTCTCTCAGATAACTTCAGCTTTTGTTTTCAGCAGAGGAATTCGTACGAGGATTTTGAATGGGAGGAGGTTGAGGAACGGGTGGACGAAAGGGAAATTTCGAGCGTAGTGGTGGAGGGAGCCGAGGAATTGACCATTGCATCTGGTTTTTCCAATGATGAAGAATCAGGAGAAGAGGCGGGCCGATGGGAAATTTTATTGGTAATGGACGACATTGGGAGCAATACGAATTGGGAACGGGATAATGATGCTGAGGCGTACGTAGCCGACCAGGATGATTACATGTATGCAGCAGAATATGATACCCTTTTTGGACAATTCGTTGAAAATGAGAACGCTTTGAAGGGTTGTCCTCCAGCAGCTAAGAGTGCTATGGAGAATCTTCCTCTGGTTGAGTTAAAAACAGAGAATATACTGACAGAGGAAGTGGTTATTTGTGCTGTTTGTAAGGATAAATTTTCAATGGAGGAGAAGGTGAGGAAGCTTCCTTGCTGCCACTATTACCATGATGATTGCATTCTGCCATGGCTGAATATCCGAAACACATGTCCTGTTTGTCGGTATGAGTTGCCCACCGACGATCCAGATTATGAGCGTAGGAAGAGTCAGAGGGCCAGTGGTGGCCAGCAAACGGATTTGCAGGTCAGGTACAATTTTGAACTAATAGCTTAA

Coding sequence (CDS)

ATGGCTTTTTTCTCTATTCCTAAACTTCATCTTCAACCTAACATGCCTCTTCCTGATCAACCCCGCTCCGATTCTCCTTCTCCGGTGCCGTCGATCACATCCTTCCGCCGCGACGAAGTCCCCAACCCCATGGATTTCAACCCTTTTGCCACCGTCCCCTCCATCGTCGCTCCTCCCGACGATTCCCTCCGTTTTGAGACCGATTGGTTCTCCGACACGGATTCCGACTCCGAACGCCATGTCAGTTGCTTGGTGACTGATCTTTTTGAGAATCATCGCTTCACCGATCATTTACTCGCTCTCAGCAATCACGATCATGATCTGGATTCTGGGCCGGACCCATTTACGCATTCTGCAAACGACTTGGGCATTTCGGGGTTTGAAGATAGCGGTGACATTGAATCTAACTATACTGAGGAGCTGTGGTCGACGTTTGCTGTGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCAAGTTGCGGATTCGATTAACAGTGACCTTCGGGTTGTTGATGTAGATTCGGACTCGGATTATGATAATGGAATTATCGGTGCTCTGCAATTTGTGACAGGGGATGATGGCGAAAATGATGTTAATTGGGTTGAAAGTCCGAATCCTCTCTCAGATAACTTCAGCTTTTGTTTTCAGCAGAGGAATTCGTACGAGGATTTTGAATGGGAGGAGGTTGAGGAACGGGTGGACGAAAGGGAAATTTCGAGCGTAGTGGTGGAGGGAGCCGAGGAATTGACCATTGCATCTGGTTTTTCCAATGATGAAGAATCAGGAGAAGAGGCGGGCCGATGGGAAATTTTATTGGTAATGGACGACATTGGGAGCAATACGAATTGGGAACGGGATAATGATGCTGAGGCGTACGTAGCCGACCAGGATGATTACATGTATGCAGCAGAATATGATACCCTTTTTGGACAATTCGTTGAAAATGAGAACGCTTTGAAGGGTTGTCCTCCAGCAGCTAAGAGTGCTATGGAGAATCTTCCTCTGGTTGAGTTAAAAACAGAGAATATACTGACAGAGGAAGTGGTTATTTGTGCTGTTTGTAAGGATAAATTTTCAATGGAGGAGAAGGTGAGGAAGCTTCCTTGCTGCCACTATTACCATGATGATTGCATTCTGCCATGGCTGAATATCCGAAACACATGTCCTGTTTGTCGGTATGAGTTGCCCACCGACGATCCAGATTATGAGCGTAGGAAGAGTCAGAGGGCCAGTGGTGGCCAGCAAACGGATTTGCAGGTCAGGTACAATTTTGAACTAATAGCTTAA

Protein sequence

MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPDDSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSANDLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDVDSDSDYDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDEREISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQDDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTDLQVRYNFELIA

Homology

[Close]

BLAST of Carg05907 vs. NCBI nr
Match: XP_022989863.1 (uncharacterized protein LOC111486927 [Cucurbita maxima])

HSP 1 Score: 850.5 bits (2196), Expect = 2.5e-243
Identity = 419/431 (97.22%), Postives = 421/431 (97.68%), Query Frame = 0


Query: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 60
           MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDE PNPMDFNPFATVPSIV PPD
Sbjct: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEFPNPMDFNPFATVPSIVTPPD 60

Query: 61  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120
           DSLRFETDWFSDTDSDSER VSCLVTDLFENHRFTDHLL LSNHDHDLDSGPDPFTHSAN
Sbjct: 61  DSLRFETDWFSDTDSDSERDVSCLVTDLFENHRFTDHLLTLSNHDHDLDSGPDPFTHSAN 120

Query: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 180
           DLGISGFEDSGDIESNYTEELWSTFAVES SRVSEVDVSMQVADSINSDLRVVD  SD+D
Sbjct: 121 DLGISGFEDSGDIESNYTEELWSTFAVESGSRVSEVDVSMQVADSINSDLRVVDVDSDTD 180

Query: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240
           YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE
Sbjct: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240

Query: 241 ISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD 300
           ISSVVVEGAEELT+AS FSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD
Sbjct: 241 ISSVVVEGAEELTLASDFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD 300

Query: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360
           DYMYAAEYD LFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK
Sbjct: 301 DYMYAAEYDALFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360

Query: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD 420
           FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQR SGGQQTD
Sbjct: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRTSGGQQTD 420

Query: 421 LQVRYNFELIA 432
           LQVRYNFELIA
Sbjct: 421 LQVRYNFELIA 431

[Close]

BLAST of Carg05907 vs. NCBI nr
Match: XP_023526783.1 (uncharacterized protein LOC111790174 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 848.2 bits (2190), Expect = 1.2e-242
Identity = 421/431 (97.68%), Postives = 423/431 (98.14%), Query Frame = 0


Query: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 60
           MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDE PNPMDFNPFATVPSIVAPPD
Sbjct: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEFPNPMDFNPFATVPSIVAPPD 60

Query: 61  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120
           DSLRFETDWFSDTDSDSER VSCLVTDLFENHRFTDHLLALSNHD DLDSGPDPFTHSAN
Sbjct: 61  DSLRFETDWFSDTDSDSERDVSCLVTDLFENHRFTDHLLALSNHDRDLDSGPDPFTHSAN 120

Query: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 180
           DLGISGFEDSGDIESNYTEELWSTFAVESDSR SEVDVSMQVADSINSDLRVVD  SDSD
Sbjct: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRDSEVDVSMQVADSINSDLRVVDVDSDSD 180

Query: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240
           YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE
Sbjct: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240

Query: 241 ISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD 300
           ISSVVVEGAEELT+ASGFSNDEESGEEAGRWEILLVMDDIGSNTN ERDNDAEAYVADQD
Sbjct: 241 ISSVVVEGAEELTLASGFSNDEESGEEAGRWEILLVMDDIGSNTNRERDNDAEAYVADQD 300

Query: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360
           DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK
Sbjct: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360

Query: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD 420
           FSMEEKVRKLPCCHYYHDDCI+ WLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD
Sbjct: 361 FSMEEKVRKLPCCHYYHDDCIVQWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD 420

Query: 421 LQVRYNFELIA 432
           LQVRYNFELIA
Sbjct: 421 LQVRYNFELIA 431

[Close]

BLAST of Carg05907 vs. NCBI nr
Match: XP_022921923.1 (uncharacterized protein LOC111430034 [Cucurbita moschata])

HSP 1 Score: 842.8 bits (2176), Expect = 5.2e-241
Identity = 419/431 (97.22%), Postives = 420/431 (97.45%), Query Frame = 0


Query: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 60
           MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDE PNPMDFNPFATVPSIVAPPD
Sbjct: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEFPNPMDFNPFATVPSIVAPPD 60

Query: 61  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120
           DSLRFETDWFSDTDSDSER VSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN
Sbjct: 61  DSLRFETDWFSDTDSDSERDVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120

Query: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 180
           DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINS      XX   D
Sbjct: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSXXXXXXXXXXXD 180

Query: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240
           Y+NGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE
Sbjct: 181 YENGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDERE 240

Query: 241 ISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD 300
           ISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD
Sbjct: 241 ISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQD 300

Query: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360
           DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK
Sbjct: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360

Query: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD 420
           FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD
Sbjct: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTD 420

Query: 421 LQVRYNFELIA 432
           LQVRYNFELIA
Sbjct: 421 LQVRYNFELIA 431

[Close]

BLAST of Carg05907 vs. NCBI nr
Match: XP_022992755.1 (uncharacterized protein LOC111488995 isoform X4 [Cucurbita maxima])

HSP 1 Score: 713.8 bits (1841), Expect = 3.6e-202
Identity = 353/432 (81.71%), Postives = 385/432 (89.12%), Query Frame = 0


Query: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 60
           M F SIPKL+LQPN+ LPDQ  SDSPSPVPS+ S RRD++PN MDFNPFAT+ SIV   D
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 61  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120
           DS  F+TDWFSD DS+SER VSC VTDLFEN RFTDHL A S++D  LDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 180
           DLGISGFED+G+IES+Y EELWS FA+ESDSRVSEVDVSM VADS  S LR+VD  SDS+
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEEVEERVDER 240
            DNG+IGALQ VTGDDGEND NWVE+PNPLSD+FSFCFQ QR  YEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 241 EISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQ 300
           +  S VV+GAEEL++ASGFSN+EESGEEAGRWEILLVM++I  NTNWERDNDAEAY+ADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNNIVRNTNWERDNDAEAYIADQ 300

Query: 301 DDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKD 360
           DDYMYA EYDTLFGQFVENENALKG PPAAKS++ENLPLVELKTEN+LTEE+V CAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 361 KFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQT 420
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRA GG QT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRAGGGLQT 420

Query: 421 DLQVRYNFELIA 432
           DL+VRYNFELIA
Sbjct: 421 DLRVRYNFELIA 432

[Close]

BLAST of Carg05907 vs. NCBI nr
Match: XP_022938801.1 (uncharacterized protein LOC111444905 isoform X3 [Cucurbita moschata])

HSP 1 Score: 713.0 bits (1839), Expect = 6.2e-202
Identity = 352/432 (81.48%), Postives = 385/432 (89.12%), Query Frame = 0


Query: 1   MAFFSIPKLHLQPNMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 60
           M F SIPKL+LQPN+ LPDQ  SDSPSPVPS+ S RRD++PN MDFNPFAT+ SIV   D
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 61  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 120
           DS  F+TDWFSD DS+SER VSC VTDLFEN RFTDHL A S++D  LDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 121 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 180
           DLGISGFED+G+IES+Y EELWS FA+ESDSRVSEVDVSM VADS  S LR+VD  SDS+
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 181 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEEVEERVDER 240
            DNG+IGALQ VTGDDGEND NWVE+PNPLSD+FSFCFQ QR  YEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 241 EISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQ 300
           +  S VV+GAEEL++ASGFSN+EE+GEEAGRWEILLVM+DI  NTNWERDNDAEAY+ADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEEAGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 300

Query: 301 DDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKD 360
           DDYMYA EYDTLFGQFVENENALKG PPAAKS++ENLPLVELKTEN+LTEE+V CAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 361 KFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQT 420
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKS+RA GG QT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 420

Query: 421 DLQVRYNFELIA 432
           DL+VRYNFELIA
Sbjct: 421 DLRVRYNFELIA 432

[Close]

BLAST of Carg05907 vs. TAIR10
Match: AT3G02340.1 (RING/U-box superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-38
Identity = 110/328 (33.54%), Postives = 166/328 (50.61%), Query Frame = 0


Query: 109 DSGPDP-------FTHSANDLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDV--- 168
           DS PDP       F   ++D+ ++ + +SG + +     +W  +  + D    E+ +   
Sbjct: 69  DSEPDPNSCPIDFFDRDSSDVDVAEYLESGGLTAG-DYNIWGFYDPKEDEEEEEIVLGTS 128

Query: 169 --SMQVADSINSDLRVVDXXSDSDYDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSF 228
              +Q  DS    LRV    SDSD ++G+   +   +  +  ND   VE    L   +  
Sbjct: 129 GSDLQPGDSGEQGLRVTGIDSDSDCEDGVFDFISEDSSGNRGNDSGRVEVGTGLPPVWDH 188

Query: 229 CFQQRNSYEDFEWEEVEERVDEREISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLV 288
            F +     D EWEEV+  ++    S    E                  E    W++LL 
Sbjct: 189 LFGEGTVLADEEWEEVQNAINWTAFSGPEDEXXXXXXXXXXXXXXXXXHEL--DWQVLLT 248

Query: 289 MDDI--------GSNTNWERDNDAEAYV----ADQDDYMYAAEY--DTLFGQFVENENAL 348
           ++++        G   N + D D + Y+     D+ D  ++  Y  D + GQ  ++E  +
Sbjct: 249 VNNVVNYIEQAEGIMLNPD-DIDPDYYLYLSGLDEFDENHSGHYDADAILGQMFDDETGI 308

Query: 349 KGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCIL 408
           +G PPAAKS +++LP+VEL  E  L +   +CAVCKD+  +EEKVR+LPC H+YH +CI+
Sbjct: 309 RGNPPAAKSVIQDLPVVELAVEE-LDKGNNVCAVCKDEMLVEEKVRRLPCSHFYHGECII 368

Query: 409 PWLNIRNTCPVCRYELPTDDPDYERRKS 411
           PWL IRNTCPVCRYELPTDD +YER KS
Sbjct: 369 PWLGIRNTCPVCRYELPTDDLEYERHKS 391

[Close]

BLAST of Carg05907 vs. TAIR10
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-34
Identity = 125/389 (32.13%), Postives = 184/389 (47.30%), Query Frame = 0


Query: 54  SIVAPPDDSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPD 113
           S V PP D      D F +  +D  R  +C V             +   N D  ++ G +
Sbjct: 12  SQVTPPHDDSNIHGD-FDNEATDESRSETCSV-------------VIEGNCDMVIELGLE 71

Query: 114 PFTHSANDLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVAD--SINSDLR 173
             +    +LG S  + S D +             + D  V   D  ++  D  S  +D+R
Sbjct: 72  SGSVIVENLGDSDIDVSNDFDE----------PDDDDFFVGRTDFGLEFRDIASSGNDIR 131

Query: 174 VVDXXSDSDYDNGIIGALQFVTGDDGENDV----NWVESPNPLSDNFSFCF------QQR 233
           ++   S SD D+G+    +    D  E DV            +S     C+       + 
Sbjct: 132 LITVESGSDDDDGVENERELWGIDLNEEDVYVNDXXXXXXXDVSVTIPLCWDSLQLEDRE 191

Query: 234 NSYEDFEWEEV-----EERVDEREISSVVVE---GAEELTIASGFSNDE-----ESGEEA 293
            + ++F+WEEV           REI S   +     E L  AS   + E     E  E +
Sbjct: 192 VTADEFDWEEVXXXXXXXXXXXREIRSGFAQIDMNDESLISASPIISLEGLVTRERAEGS 251

Query: 294 GR--WEILLVMDDIGSNTNWERDNDAEAYV-ADQDDYMYAAEYDTLFGQFVENENALKGC 353
           G   WE+LL   +     N++ DN  E Y+  D DDY+   +YD LF QF + E ++ G 
Sbjct: 252 GNLGWEVLL---NHTLEINFDVDN-RELYIGGDHDDYV--QDYDMLFEQFADAEVSVIGL 311

Query: 354 PPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWL 413
           PP +KS + NLP+V L+ EN   +  ++CAVCKD+ ++  K  +LPC H YH +CI+PWL
Sbjct: 312 PPTSKSFLNNLPVVLLEGEND-DDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWL 369

Query: 414 NIRNTCPVCRYELPTDDPDYERRKSQRAS 415
            +RNTCPVCRYELPTDD +YE+RK+QR +
Sbjct: 372 KVRNTCPVCRYELPTDDAEYEQRKTQRTT 369

[Close]

BLAST of Carg05907 vs. TAIR10
Match: AT5G15820.1 (RING/U-box superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 7.9e-34
Identity = 68/139 (48.92%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 271 WEILLVMDDIGSNTNWERDNDAEAYVADQDDYMYAAEYDTLFGQFVENENALKGCPPAAK 330
           WEILL  D++ ++     D D E ++   D Y    +Y+ + GQ  +NE  +KG PPA+K
Sbjct: 213 WEILL-YDNMTNSA--PMDLDVEVWLDSVDGYA-PMDYNAIIGQMFDNETGIKGTPPASK 272

Query: 331 SAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWLNIRNT 390
           S ++ LP VEL  E  L+   ++CA+CKD+   +EKV++LPC HYYH +CI+PWL IRNT
Sbjct: 273 SVVDGLPDVELTIEE-LSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNT 332

Query: 391 CPVCRYELPTDDPDYERRK 410
           CPVCR+ELPTDD +YER++
Sbjct: 333 CPVCRHELPTDDLEYERKR 346

[Close]

BLAST of Carg05907 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 2.9e-28
Identity = 74/195 (37.95%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 225 EDFEWEEVEERVDEREISSVVVEGAE----ELTIASGFSND-----EESGEEAGRWEILL 284
           ED EWEEV+   DERE+ SV+ E  +     +++A+  S +     E  G     WE+LL
Sbjct: 230 EDCEWEEVDSD-DEREVLSVLAEADDNNSVSVSVAATISLEDLAISERRGSSNLGWEVLL 289

Query: 285 VMDDIGSNTNWERDNDAEAYVADQD-------DYMYAAEYDTLFGQFVENENALKGCPPA 344
               +  N + + +++ E Y+ D D       DY++  EY+ LF   + +     G PPA
Sbjct: 290 NSRSLEFNLD-DAESNLELYIGDIDHEEEDYEDYLHTTEYEMLFEAEISSG---IGKPPA 349

Query: 345 AKSAMENLPLVELKTENIL--TEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWLN 402
           +KS ++NL +  L  E+++   ++ V CAVCK++  + ++V +LPC H YH +CI+PWL 
Sbjct: 350 SKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLG 409

[Close]

BLAST of Carg05907 vs. TAIR10
Match: AT5G01980.1 (RING/U-box superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 4.9e-28
Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 0


Query: 191 FVTGDDGENDVNWVESPNPLSDNFSFCFQQRNSYEDFEWEE--VEERVDEREISSVVVEG 250
           FV  DD  +D+++    +P+    +   Q  +  ED EWEE      V      + +   
Sbjct: 192 FVQPDD-RSDIDFDTDIDPMRAGLN---QWNSDEEDREWEEGAGPSGVAGTRYRNYLASP 251

Query: 251 AEELTIASGFSNDEESGEEAGRWEILLVMDDIGSN--TNWERDNDAEAYVADQDDYMYAA 310
           +E  +  + F + E   E + R  I+     +  N  T  E D D   Y A+  DY+   
Sbjct: 252 SESYSSMTRFDSPEL--ERSFRQRIIERRHSLSRNIFTGLE-DLDFSPYAANVGDYLDER 311

Query: 311 EYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEK 370
            +D L  Q  E++N+ +G PPA+ S + NLP V +  E+++  + ++CA+CK+ FS+  +
Sbjct: 312 GFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIAEEHVM--KGLVCAICKELFSLRNE 371

Query: 371 VRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRK 410
             +LPC H YH  CI+PWL+ RN+CP+CRYELPTDD DYE  K
Sbjct: 372 TTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTDDKDYEEGK 405

[Close]

BLAST of Carg05907 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.2e-27
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 297 ADQDDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAV 356
           A+  DY      + L  Q  EN+    G PPA+KSA+E LPLV + T++ L  E   CAV
Sbjct: 168 ANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNI-TKSNLNSEFNQCAV 227

Query: 357 CKDKFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYER--RKSQRAS 416
           C D F    + +++PC H YH DC+LPWL + N+CPVCR+ELPTDDPDYER  R +Q  S
Sbjct: 228 CMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTS 287

Query: 417 GGQQTD 421
           GG   D
Sbjct: 288 GGNDGD 292

[Close]

BLAST of Carg05907 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.6e-26
Identity = 59/127 (46.46%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 301 DYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDK 360
           DY +    + L  Q  EN+    G PPA+KSA++ LP V++ T+++L  E+  CAVC D+
Sbjct: 164 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKV-TKDMLKSEMNQCAVCMDE 223

Query: 361 FSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERR-KSQRASG---- 420
           F     V+++PC H +H DC+LPWL + N+CPVCR+ELPTDDPDYE R +  + SG    
Sbjct: 224 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSGDXXX 283

[Close]

BLAST of Carg05907 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22
Identity = 49/108 (45.37%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 301 DYMYAAEYDTLFGQFVENE----NALKGC--PPAAKSAMENLPLVELKTENILTEEVVIC 360
           +++  + +D L  Q  + E      L+ C  PPA+KSA+E LPL+E+   ++L++    C
Sbjct: 142 EFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHC 201

Query: 361 AVCKDKFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDD 403
           AVCK+ F ++   R++PC H YH DCILPWL IRN+CPVCR+ELP +D
Sbjct: 202 AVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAED 249

[Close]

BLAST of Carg05907 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.1e-19
Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 324 GCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILP 383
           G PPA+KSA+E+LP VE+   +I +E    CAVC + F  E + R++PC H +HDDCI+P
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSE--ANCAVCTEIFETETEAREMPCKHLFHDDCIVP 230

Query: 384 WLNIRNTCPVCRYELPTD 402
           WL+IRN+CPVCR+ELP++
Sbjct: 231 WLSIRNSCPVCRFELPSE 246

[Close]

BLAST of Carg05907 vs. Swiss-Prot
Match: sp|Q6GPV5|RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-18
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 326 PPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWL 385
           PPA+K  +E+LP V +  E    +  + C VC  +F   E VR+LPC H +H  CILPWL
Sbjct: 53  PPASKKVVESLPKVTVTPEQ--ADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWL 112

Query: 386 NIRNTCPVCRYELPTDDPDYERRKSQRASGGQQ 419
              N+CP+CR+ELPTD PDYE  K ++A   Q+
Sbjct: 113 GKTNSCPLCRHELPTDSPDYEEFKQEKARRQQK 143

[Close]

BLAST of Carg05907 vs. TrEMBL
Match: tr|A0A1S4E2J2|A0A1S4E2J2_CUCME (uncharacterized protein LOC103498560 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498560 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 1.4e-181
Identity = 333/425 (78.35%), Postives = 364/425 (85.65%), Query Frame = 0


Query: 3   FFSIPKLHLQP--NMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 62
           FFSI KLHLQP  NMPLPDQ  ++SPSPVPSI S RR++ PNPMDFNPFATVPSIV   D
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAAD 63

Query: 63  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 122
            SL FETDWFSD+DS+S+R V+C VTDLFEN  FTD    L +HD  LDS  DPFTHS N
Sbjct: 64  VSLPFETDWFSDSDSESDRDVNCFVTDLFENRSFTD---PLHDHDRGLDSVLDPFTHSVN 123

Query: 123 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 182
           DLG+SGFEDSG+I SNY EELWSTF VESD+RVSEVDVSMQ+ADSI + LRVVD X    
Sbjct: 124 DLGVSGFEDSGEIVSNYIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXX 183

Query: 183 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEEVEERVDER 242
              G+IGALQ VTGDD END NWVES NP+SD F+FCFQ QR SYEDFEWEE+EERVDER
Sbjct: 184 XXPGMIGALQLVTGDDVENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDER 243

Query: 243 EISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQ 302
           EISSVVV+ AEEL++ASGFSN+EE GEEAGRWEILLVM+DIG      R+NDAEAY+ADQ
Sbjct: 244 EISSVVVDRAEELSLASGFSNEEEPGEEAGRWEILLVMNDIG------RNNDAEAYIADQ 303

Query: 303 DDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKD 362
           DDYMYAAEYDTLFGQFVEN+NALKG PPAAKSA+ENLPLVELKTEN L EEVV+CAVCKD
Sbjct: 304 DDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKD 363

Query: 363 KFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQT 422
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+SQR SGG Q+
Sbjct: 364 KFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQS 419

Query: 423 DLQVR 425
           DLQVR
Sbjct: 424 DLQVR 419

[Close]

BLAST of Carg05907 vs. TrEMBL
Match: tr|A0A1S3CAM8|A0A1S3CAM8_CUCME (uncharacterized protein LOC103498560 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498560 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 4.0e-181
Identity = 332/424 (78.30%), Postives = 363/424 (85.61%), Query Frame = 0


Query: 3   FFSIPKLHLQP--NMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPD 62
           FFSI KLHLQP  NMPLPDQ  ++SPSPVPSI S RR++ PNPMDFNPFATVPSIV   D
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAAD 63

Query: 63  DSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSAN 122
            SL FETDWFSD+DS+S+R V+C VTDLFEN  FTD    L +HD  LDS  DPFTHS N
Sbjct: 64  VSLPFETDWFSDSDSESDRDVNCFVTDLFENRSFTD---PLHDHDRGLDSVLDPFTHSVN 123

Query: 123 DLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSD 182
           DLG+SGFEDSG+I SNY EELWSTF VESD+RVSEVDVSMQ+ADSI + LRVVD X    
Sbjct: 124 DLGVSGFEDSGEIVSNYIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXX 183

Query: 183 YDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEEVEERVDER 242
              G+IGALQ VTGDD END NWVES NP+SD F+FCFQ QR SYEDFEWEE+EERVDER
Sbjct: 184 XXPGMIGALQLVTGDDVENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDER 243

Query: 243 EISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQ 302
           EISSVVV+ AEEL++ASGFSN+EE GEEAGRWEILLVM+DIG      R+NDAEAY+ADQ
Sbjct: 244 EISSVVVDRAEELSLASGFSNEEEPGEEAGRWEILLVMNDIG------RNNDAEAYIADQ 303

Query: 303 DDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKD 362
           DDYMYAAEYDTLFGQFVEN+NALKG PPAAKSA+ENLPLVELKTEN L EEVV+CAVCKD
Sbjct: 304 DDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKD 363

Query: 363 KFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQT 422
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+SQR SGG Q+
Sbjct: 364 KFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQS 418

Query: 423 DLQV 424
           DLQV
Sbjct: 424 DLQV 418

[Close]

BLAST of Carg05907 vs. TrEMBL
Match: tr|E5GCS9|E5GCS9_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 8.8e-181
Identity = 329/418 (78.71%), Postives = 360/418 (86.12%), Query Frame = 0


Query: 15  MPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIVAPPDDSLRFETDWFSDTD 74
           MPLPDQ  ++SPSPVPSI S RR++ PNPMDFNPFATVPSIV   D SL FETDWFSD+D
Sbjct: 1   MPLPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAADVSLPFETDWFSDSD 60

Query: 75  SDSERHVSCLVTDLFENHRFTDHLLALSNHDHDLDSGPDPFTHSANDLGISGFEDSGDIE 134
           S+S+R V+C VTDLFEN  FTD    L +HD  LDS  DPFTHS NDLG+SGFEDSG+I 
Sbjct: 61  SESDRDVNCFVTDLFENRSFTD---PLHDHDRGLDSVLDPFTHSVNDLGVSGFEDSGEIV 120

Query: 135 SNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRVVDXXSDSDYDNGIIGALQFVTG 194
           SNY EELWSTF VESD+RVSEVDVSMQ+ADSI + LRVVD X       G+IGALQ VTG
Sbjct: 121 SNYIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXXXXPGMIGALQLVTG 180

Query: 195 DDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEEVEERVDEREISSVVVEGAEELT 254
           DD END NWVES NP+SD F+FCFQ QR SYEDFEWEE+EERVDEREISSVVV+ AEEL+
Sbjct: 181 DDVENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDEREISSVVVDRAEELS 240

Query: 255 IASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDNDAEAYVADQDDYMYAAEYDTLFG 314
           +ASGFSN+EE GEEAGRWEILLVM+DIG      R+NDAEAY+ADQDDYMYAAEYDTLFG
Sbjct: 241 LASGFSNEEEPGEEAGRWEILLVMNDIG------RNNDAEAYIADQDDYMYAAEYDTLFG 300

Query: 315 QFVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCC 374
           QFVEN+NALKG PPAAKSA+ENLPLVELKTEN L EEVV+CAVCKDKFSMEEKVRKLPC 
Sbjct: 301 QFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKDKFSMEEKVRKLPCG 360

Query: 375 HYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTDLQVRYNFELIA 432
           HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+SQR SGG Q+DLQVRYNFELIA
Sbjct: 361 HYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQSDLQVRYNFELIA 409

[Close]

BLAST of Carg05907 vs. TrEMBL
Match: tr|A0A0A0KUI4|A0A0A0KUI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642700 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 1.8e-178
Identity = 337/440 (76.59%), Postives = 365/440 (82.95%), Query Frame = 0


Query: 3   FFSIPKLHLQP--NMPLPDQPRSDSPSPVPSITSFRRDEVPNPMDFNPFATVPSIV--AP 62
           FFSI KLHLQP  NMPLPDQ  ++SPSPVPSI S RR++ PNPMDFNPFATVPSIV  A 
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHNNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTSAA 63

Query: 63  PDDSLRFETDWFSDTDSDSERHVSCLVTDLFENHRFTDHLLALSNHDHD------LDSGP 122
            D S  FETDWFSD+DS+S+R VSC VTDLF+N  FTD L     HD        L S  
Sbjct: 64  ADVSHPFETDWFSDSDSESDRDVSCFVTDLFDNRSFTDPL-----HDXXXXXXGALFSVL 123

Query: 123 DPFTHSANDLGISGFEDSGDIESNYTEELWSTFAVESDSRVSEVDVSMQVADSINSDLRV 182
           DPFTHS NDLG+SGFE SG+I SNY EELWSTF VESD+RVSEVDVSMQ+ADSI + LRV
Sbjct: 124 DPFTHSVNDLGVSGFEGSGEIGSNYVEELWSTFGVESDTRVSEVDVSMQIADSITTGLRV 183

Query: 183 VDXXSDSDYDNGIIGALQFVTGDDGENDVNWVESPNPLSDNFSFCFQ-QRNSYEDFEWEE 242
           VD X       GIIGALQ VTGDD END NWVES NP+SD  + CFQ QR SYEDFEWEE
Sbjct: 184 VDVXXXXXXXPGIIGALQLVTGDDVENDGNWVESSNPVSDTLNLCFQGQRISYEDFEWEE 243

Query: 243 VEERVDEREISSVVVEGAEELTIASGFSNDEESGEEAGRWEILLVMDDIGSNTNWERDND 302
           VEERVDEREISSVVV+ AEEL++ASGFSN+EE GEE GRWEIL VM+DIG      R+ND
Sbjct: 244 VEERVDEREISSVVVDRAEELSLASGFSNEEEPGEEVGRWEILFVMNDIG------RNND 303

Query: 303 AEAYVADQDDYMYAAEYDTLFGQFVENENALKGCPPAAKSAMENLPLVELKTENILTEEV 362
           AEAY+ADQDDYMYAAEYDTLFGQFVEN+NALKG PPAAKSA+ENLPLVELKTEN L EEV
Sbjct: 304 AEAYIADQDDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEV 363

Query: 363 VICAVCKDKFSMEEKVRKLPCCHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQ 422
           V+CAVCKDKFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+SQ
Sbjct: 364 VVCAVCKDKFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQ 423

Query: 423 RASGGQQTDLQVRYNFELIA 432
           RASGG Q+DLQVRYNFELIA
Sbjct: 424 RASGGLQSDLQVRYNFELIA 432

[Close]

BLAST of Carg05907 vs. TrEMBL
Match: tr|A0A2P5CAF2|A0A2P5CAF2_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169710 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 8.5e-67
Identity = 174/415 (41.93%), Postives = 229/415 (55.18%), Query Frame = 0


Query: 31  SITSFRRDEVPNPMDFNPFATVPSIVAPPD---DSLRFETDWFSDTDSDSERHVSCLVTD 90
           SIT    D   NP      + VPS V   D         +DWFS++ S+S+R +SC VTD
Sbjct: 38  SITDVTDDHNCNPFASASTSFVPSPVTLVDAVGPGSSCASDWFSESGSESDRDISCFVTD 97

Query: 91  LFENHRFTDHLLALSNHDHDLDSGPDPFTHSANDLGISGFEDSGDIESNYTEELWSTFAV 150
           LF+      H +A  + +  L         S NDL I G E                   
Sbjct: 98  LFDRRGSEQHDVAYGDWNSGL---------SLNDLVIGGSEVGXXXXXXXXXXXXXXXXX 157

Query: 151 ESDSRVSEVDVSMQVADSINSDLRVVDXXSDSDYDNGIIGALQF------VTGDDGENDV 210
                   VD            LRVV   S+S+ ++G  G L F       +GD      
Sbjct: 158 XXXXXXXXVD-----------GLRVVGFDSESESEDGNFGVLGFNSLHDNDSGDRNSRVN 217

Query: 211 NWVESPNPLSDNFSFCFQQRNSYEDFEWEEVEERVDEREISSVVVEGAEELTIASGFSND 270
           +W    NP  ++      +R+ +E+F+WEEVEER +ERE  S+V++   E   A     D
Sbjct: 218 DWDNHDNPCLED------ERSFFEEFDWEEVEERANERENLSIVIDDYVEEVPA---GED 277

Query: 271 EESGEEAGR---WEILLVMDDIGSNTNWER--DNDAEAYVADQDDYMY--AAEYDTLFGQ 330
           EE+ EE  R   WEILL ++++  N++ ER  D+  ++Y+A QDDY Y    EY++LF Q
Sbjct: 278 EEAPEEGVRSLEWEILLAINNLAMNSSLERNVDSGTDSYLAVQDDYTYTVGVEYESLFEQ 337

Query: 331 FVENENALKGCPPAAKSAMENLPLVELKTENILTEEVVICAVCKDKFSMEEKVRKLPCCH 390
           F+E E+ALKG PPAAKS +ENLP VEL  E ++ ++VV CAVCKD+  ++EKV++LPC H
Sbjct: 338 FIETESALKGSPPAAKSVVENLPFVELTVEELMKDDVV-CAVCKDQIVVKEKVKRLPCSH 397

Query: 391 YYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRASGGQQTDLQVRYNFEL 430
            YH DCI+PWL IRNTCPVCRYELPTDD DYERRKSQRA  G   D QV +NFEL
Sbjct: 398 CYHGDCIVPWLGIRNTCPVCRYELPTDDLDYERRKSQRAHRGPSMDSQVIFNFEL 422

The following BLAST results are available for this feature:

BLAST of Carg05907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989863.1	2.5e-243	97.22	uncharacterized protein LOC111486927 [Cucurbita maxima]	[more]
XP_023526783.1	1.2e-242	97.68	uncharacterized protein LOC111790174 [Cucurbita pepo subsp. pepo]	[more]
XP_022921923.1	5.2e-241	97.22	uncharacterized protein LOC111430034 [Cucurbita moschata]	[more]
XP_022992755.1	3.6e-202	81.71	uncharacterized protein LOC111488995 isoform X4 [Cucurbita maxima]	[more]
XP_022938801.1	6.2e-202	81.48	uncharacterized protein LOC111444905 isoform X3 [Cucurbita moschata]	[more]

BLAST of Carg05907 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02340.1	1.4e-38	33.54	RING/U-box superfamily protein	[more]
AT5G08139.1	7.9e-34	32.13	RING/U-box superfamily protein	[more]
AT5G15820.1	7.9e-34	48.92	RING/U-box superfamily protein	[more]
AT5G60820.1	2.9e-28	37.95	RING/U-box superfamily protein	[more]
AT5G01980.1	4.9e-28	34.98	RING/U-box superfamily protein	[more]

BLAST of Carg05907 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CH30\|RING1_GOSHI	5.2e-27	49.21	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|Q8LPN7\|RNG1L_ARATH	2.6e-26	46.46	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|O22283\|RHC2A_ARATH	1.7e-22	45.37	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q940T5\|RDUF2_ARATH	3.1e-19	55.13	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
sp\|Q6GPV5\|RN181_XENLA	3.4e-18	47.31	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1	[more]

BLAST of Carg05907 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E2J2\|A0A1S4E2J2_CUCME	1.4e-181	78.35	uncharacterized protein LOC103498560 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CAM8\|A0A1S3CAM8_CUCME	4.0e-181	78.30	uncharacterized protein LOC103498560 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|E5GCS9\|E5GCS9_CUCME	8.8e-181	78.71	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0KUI4\|A0A0A0KUI4_CUCSA	1.8e-178	76.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642700 PE=4 SV=1	[more]
tr\|A0A2P5CAF2\|A0A2P5CAF2_PARAD	8.5e-67	41.93	43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_169710...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05907-RA	Carg05907-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 354..394 e-value: 2.5E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 354..395 e-value: 6.0E-11 score: 42.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 354..395 score: 12.076
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 313..401 e-value: 9.3E-20 score: 72.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..43
None	No IPR available	PANTHER	PTHR44679	FAMILY NOT NAMED	coord: 288..416
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 354..395 e-value: 2.79614E-22 score: 88.1436
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 335..401

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05907	Cla012056	Watermelon (97103) v1	carwmB0019
Carg05907	Cla016492	Watermelon (97103) v1	carwmB0025
Carg05907	Csa5G642700	Cucumber (Chinese Long) v2	carcuB0021
Carg05907	Csa4G337330	Cucumber (Chinese Long) v2	carcuB0020
Carg05907	MELO3C022061	Melon (DHL92) v3.5.1	carmeB0018
Carg05907	ClCG04G006120	Watermelon (Charleston Gray)	carwcgB0026
Carg05907	ClCG11G005060	Watermelon (Charleston Gray)	carwcgB0019
Carg05907	CSPI04G16850	Wild cucumber (PI 183967)	carcpiB0020
Carg05907	CSPI05G29680	Wild cucumber (PI 183967)	carcpiB0022
Carg05907	Cucsa.130800	Cucumber (Gy14) v1	carcgyB0018
Carg05907	Cucsa.238420	Cucumber (Gy14) v1	carcgyB0024
Carg05907	CmaCh15G002110	Cucurbita maxima (Rimu)	carcmaB0030
Carg05907	CmaCh03G002720	Cucurbita maxima (Rimu)	carcmaB0032
Carg05907	CmaCh04G028260	Cucurbita maxima (Rimu)	carcmaB0033
Carg05907	CmoCh07G012400	Cucurbita moschata (Rifu)	carcmoB0035
Carg05907	CmoCh04G029550	Cucurbita moschata (Rifu)	carcmoB0033
Carg05907	CmoCh03G002840	Cucurbita moschata (Rifu)	carcmoB0032
Carg05907	CmoCh15G002230	Cucurbita moschata (Rifu)	carcmoB0031
Carg05907	Lsi01G016400	Bottle gourd (USVL1VR-Ls)	carlsiB015
Carg05907	Lsi03G001970	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg05907	Cp4.1LG13g08070	Cucurbita pepo (Zucchini)	carcpeB0031
Carg05907	Cp4.1LG10g07330	Cucurbita pepo (Zucchini)	carcpeB0030
Carg05907	Cp4.1LG01g22200	Cucurbita pepo (Zucchini)	carcpeB0034
Carg05907	CsGy4G016170	Cucumber (Gy14) v2	carcgybB0019
Carg05907	CsGy5G029120	Cucumber (Gy14) v2	carcgybB0021
Carg05907	MELO3C022061.2	Melon (DHL92) v3.6.1	carmedB0019
Carg05907	CsaV3_5G038810	Cucumber (Chinese Long) v3	carcucB0022
Carg05907	CsaV3_4G027440	Cucumber (Chinese Long) v3	carcucB0020
Carg05907	Cla97C11G211880	Watermelon (97103) v2	carwmbB0015
Carg05907	Cla97C04G072680	Watermelon (97103) v2	carwmbB0021
Carg05907	Bhi06G000247	Wax gourd	carwgoB0020
Carg05907	Bhi03G001794	Wax gourd	carwgoB0025

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05907	Carg02198	Silver-seed gourd	carcarB020
Carg05907	Carg12632	Silver-seed gourd	carcarB021
Carg05907	Carg19539	Silver-seed gourd	carcarB024

The following block(s) are covering this gene:

None