Carg02198 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02198
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase RING1-like
Location	Cucurbita_argyrosperma_scaffold_007 : 584710 .. 586077 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAAGGGGTATAAAACCGTGACTTGGTCAAAATCCGCGAACGTCATTTCCCCCAAAATTTCTATGGATTTTCTCTCCATTCCTAAACTTAATCTTCAACCTAACGTGGCTCTTCCTGATCAAACCCACTCCGATTCTCCTTCTCCGGTACTGTCTGTCCCATCCCTCCGCCACGACGATCTCCCCAACACCATGGATTTCAATCCCTTTGCCACCATCTCCTCCATCGTCACATCTGCTGACGATTCCTTCCCTTTCGACACCGATTGGTTTTCCGACGCGGATTCCGAGTCCGAGCGTGATGTTAGTTGCTTCGTGACTGATCTTTTTGAGAATCGTCGCTTCACCGATCATTTGCACGCTTTCAGCGATTACGATCGAGGTCTGGATTCTGGGCCAGACCCATTTACGCATTCTGCTAACGACTTGGGCATTTCGGGATTTGAAGATACCGGTGAGATTGAATCTCACTATATTGAGGAGCTGTGGTCGGCTTTCGCGATGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCCAGTTGCGGATTCGACTACTAGTGGCCTTCGGATTGTTGATGTGGATTCGGACTCGGAGTCTGATAACGGGATGATTGGTGCTTTGCAACTCGTGACAGGGGATGATGGCGAGAATGATGCTAATTGGGTTGAAAATCCGAATCCTCTCTCGGATAGCTTCAGCTTTTGTTTTCAGGGCCAGAGGATTCCGTACGAGGATTTTGAATGGGAGGAGGTCGAGGAACGGGTGGACGAAAGGGATAATTTGAGCGCAGTGGTAGATGGAGCTGAGGAATTGTCTCTTGCATCGGGTTTTTCCAACGAAGAAGAATCGGGTGAAGAAGCGGGTCGATGGGAAATCCTATTGGTAATGAACGATATCGTAAGGAATACGAACTGGGAACGGGATAACGATGCTGAGGCGTACATAGCGGACCAGGATGATTACATGTATGCAGGAGAATACGATACCCTTTTTGGACAATTCGTTGAAAATGAGAATGCTTTGAAGGGTAGTCCTCCAGCAGCTAAGAGTTCTGTGGAGAACCTTCCTCTGGTTGAGTTAAAAACAGAGAATCTGCTGGCAGAGGAACTCGTTGCCTGTGCCGTTTGTAAGGATAAATTTTCAATGGAGGAAAAGGTGAGGAAGCTCCCCTGTGCTCACTATTACCATGATGATTGCATTCTGCCGTGGCTGAATATTCGAAACACATGTCCTGTTTGTCGATATGAGCTGCCAACCGATGATCCAGATTATGAGCGCAGGAAGAGTCGGAGGGCGGGTGGTGGCCTGCAAACGGATTTGCGGGTCAGGTACAATTTTGAACTGATAGCTTAA

mRNA sequence

ATGGAGAAGAAGGGGTATAAAACCGTGACTTGGTCAAAATCCGCGAACGTCATTTCCCCCAAAATTTCTATGGATTTTCTCTCCATTCCTAAACTTAATCTTCAACCTAACGTGGCTCTTCCTGATCAAACCCACTCCGATTCTCCTTCTCCGGTACTGTCTGTCCCATCCCTCCGCCACGACGATCTCCCCAACACCATGGATTTCAATCCCTTTGCCACCATCTCCTCCATCGTCACATCTGCTGACGATTCCTTCCCTTTCGACACCGATTGGTTTTCCGACGCGGATTCCGAGTCCGAGCGTGATGTTAGTTGCTTCGTGACTGATCTTTTTGAGAATCGTCGCTTCACCGATCATTTGCACGCTTTCAGCGATTACGATCGAGGTCTGGATTCTGGGCCAGACCCATTTACGCATTCTGCTAACGACTTGGGCATTTCGGGATTTGAAGATACCGGTGAGATTGAATCTCACTATATTGAGGAGCTGTGGTCGGCTTTCGCGATGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCCAGTTGCGGATTCGACTACTAGTGGCCTTCGGATTGTTGATGTGGATTCGGACTCGGAGTCTGATAACGGGATGATTGGTGCTTTGCAACTCGTGACAGGGGATGATGGCGAGAATGATGCTAATTGGGTTGAAAATCCGAATCCTCTCTCGGATAGCTTCAGCTTTTGTTTTCAGGGCCAGAGGATTCCGTACGAGGATTTTGAATGGGAGGAGGTCGAGGAACGGGTGGACGAAAGGGATAATTTGAGCGCAGTGGTAGATGGAGCTGAGGAATTGTCTCTTGCATCGGGTTTTTCCAACGAAGAAGAATCGGGTGAAGAAGCGGGTCGATGGGAAATCCTATTGGTAATGAACGATATCGTAAGGAATACGAACTGGGAACGGGATAACGATGCTGAGGCGTACATAGCGGACCAGGATGATTACATGTATGCAGGAGAATACGATACCCTTTTTGGACAATTCGTTGAAAATGAGAATGCTTTGAAGGGTAGTCCTCCAGCAGCTAAGAGTTCTGTGGAGAACCTTCCTCTGGTTGAGTTAAAAACAGAGAATCTGCTGGCAGAGGAACTCGTTGCCTGTGCCGTTTGTAAGGATAAATTTTCAATGGAGGAAAAGGTGAGGAAGCTCCCCTGTGCTCACTATTACCATGATGATTGCATTCTGCCGTGGCTGAATATTCGAAACACATGTCCTGTTTGTCGATATGAGCTGCCAACCGATGATCCAGATTATGAGCGCAGGAAGAGTCGGAGGGCGGGTGGTGGCCTGCAAACGGATTTGCGGGTCAGGTACAATTTTGAACTGATAGCTTAA

Coding sequence (CDS)

ATGGAGAAGAAGGGGTATAAAACCGTGACTTGGTCAAAATCCGCGAACGTCATTTCCCCCAAAATTTCTATGGATTTTCTCTCCATTCCTAAACTTAATCTTCAACCTAACGTGGCTCTTCCTGATCAAACCCACTCCGATTCTCCTTCTCCGGTACTGTCTGTCCCATCCCTCCGCCACGACGATCTCCCCAACACCATGGATTTCAATCCCTTTGCCACCATCTCCTCCATCGTCACATCTGCTGACGATTCCTTCCCTTTCGACACCGATTGGTTTTCCGACGCGGATTCCGAGTCCGAGCGTGATGTTAGTTGCTTCGTGACTGATCTTTTTGAGAATCGTCGCTTCACCGATCATTTGCACGCTTTCAGCGATTACGATCGAGGTCTGGATTCTGGGCCAGACCCATTTACGCATTCTGCTAACGACTTGGGCATTTCGGGATTTGAAGATACCGGTGAGATTGAATCTCACTATATTGAGGAGCTGTGGTCGGCTTTCGCGATGGAATCTGATAGCCGGGTTTCGGAGGTGGATGTGAGCATGCCAGTTGCGGATTCGACTACTAGTGGCCTTCGGATTGTTGATGTGGATTCGGACTCGGAGTCTGATAACGGGATGATTGGTGCTTTGCAACTCGTGACAGGGGATGATGGCGAGAATGATGCTAATTGGGTTGAAAATCCGAATCCTCTCTCGGATAGCTTCAGCTTTTGTTTTCAGGGCCAGAGGATTCCGTACGAGGATTTTGAATGGGAGGAGGTCGAGGAACGGGTGGACGAAAGGGATAATTTGAGCGCAGTGGTAGATGGAGCTGAGGAATTGTCTCTTGCATCGGGTTTTTCCAACGAAGAAGAATCGGGTGAAGAAGCGGGTCGATGGGAAATCCTATTGGTAATGAACGATATCGTAAGGAATACGAACTGGGAACGGGATAACGATGCTGAGGCGTACATAGCGGACCAGGATGATTACATGTATGCAGGAGAATACGATACCCTTTTTGGACAATTCGTTGAAAATGAGAATGCTTTGAAGGGTAGTCCTCCAGCAGCTAAGAGTTCTGTGGAGAACCTTCCTCTGGTTGAGTTAAAAACAGAGAATCTGCTGGCAGAGGAACTCGTTGCCTGTGCCGTTTGTAAGGATAAATTTTCAATGGAGGAAAAGGTGAGGAAGCTCCCCTGTGCTCACTATTACCATGATGATTGCATTCTGCCGTGGCTGAATATTCGAAACACATGTCCTGTTTGTCGATATGAGCTGCCAACCGATGATCCAGATTATGAGCGCAGGAAGAGTCGGAGGGCGGGTGGTGGCCTGCAAACGGATTTGCGGGTCAGGTACAATTTTGAACTGATAGCTTAA

Protein sequence

MEKKGYKTVTWSKSANVISPKISMDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSADDSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSANDLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSESDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDERDNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQDDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQTDLRVRYNFELIA

Homology

[Close]

BLAST of Carg02198 vs. NCBI nr
Match: XP_022938801.1 (uncharacterized protein LOC111444905 isoform X3 [Cucurbita moschata])

HSP 1 Score: 865.1 bits (2234), Expect = 1.0e-247
Identity = 428/432 (99.07%), Postives = 429/432 (99.31%), Query Frame = 0


Query: 24  MDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 83
           MDFLSIPKLNLQPNVALPDQTHSDSPSPV SVPSLR DDLPNTMDFNPFATISSIVTSAD
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 84  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 143
           DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 144 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 203
           DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 204 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 263
           SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 264 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 323
           DNLSAVVDGAEELSLASGFSNEEE+GEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEEAGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 300

Query: 324 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 383
           DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLL EELVACAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 384 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 443
           KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 420

Query: 444 DLRVRYNFELIA 456
           DLRVRYNFELIA
Sbjct: 421 DLRVRYNFELIA 432

[Close]

BLAST of Carg02198 vs. NCBI nr
Match: XP_022992755.1 (uncharacterized protein LOC111488995 isoform X4 [Cucurbita maxima])

HSP 1 Score: 862.8 bits (2228), Expect = 5.1e-247
Identity = 427/432 (98.84%), Postives = 429/432 (99.31%), Query Frame = 0


Query: 24  MDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 83
           MDFLSIPKLNLQPNVALPDQTHSDSPSPV SVPSLR DDLPNTMDFNPFATISSIVTSAD
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 84  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 143
           DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 144 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 203
           DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 204 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 263
           SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 264 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 323
           DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMN+IVRNTNWERDNDAEAYIADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNNIVRNTNWERDNDAEAYIADQ 300

Query: 324 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 383
           DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLL EELVACAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 384 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 443
           KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKS+RAGGGLQT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSQRAGGGLQT 420

Query: 444 DLRVRYNFELIA 456
           DLRVRYNFELIA
Sbjct: 421 DLRVRYNFELIA 432

[Close]

BLAST of Carg02198 vs. NCBI nr
Match: XP_023549550.1 (E3 ubiquitin ligase BIG BROTHER-related-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 862.1 bits (2226), Expect = 8.7e-247
Identity = 427/432 (98.84%), Postives = 428/432 (99.07%), Query Frame = 0


Query: 24  MDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 83
           MDFLSIPKLNLQPNVALPDQTHSDSPSPV SVPSLR DDLPNTMDFNPFA ISSIVTSAD
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFAAISSIVTSAD 60

Query: 84  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 143
           DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 144 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 203
           DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDV+MPVADSTTSGLRIVDVDSDSE
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVNMPVADSTTSGLRIVDVDSDSE 180

Query: 204 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 263
           SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 264 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 323
           DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 300

Query: 324 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 383
           DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 360

Query: 384 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 443
           KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 420

Query: 444 DLRVRYNFELIA 456
           DLRVRYNFE IA
Sbjct: 421 DLRVRYNFEPIA 432

[Close]

BLAST of Carg02198 vs. NCBI nr
Match: XP_022938800.1 (uncharacterized protein LOC111444905 isoform X2 [Cucurbita moschata])

HSP 1 Score: 853.6 bits (2204), Expect = 3.1e-244
Identity = 422/428 (98.60%), Postives = 424/428 (99.07%), Query Frame = 0


Query: 24  MDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 83
           MDFLSIPKLNLQPNVALPDQTHSDSPSPV SVPSLR DDLPNTMDFNPFATISSIVTSAD
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 84  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 143
           DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 144 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 203
           DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 204 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 263
           SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 264 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 323
           DNLSAVVDGAEELSLASGFSNEEE+GEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEEAGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 300

Query: 324 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 383
           DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLL EELVACAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 384 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 443
           KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 420

Query: 444 DLRVRYNF 452
           DLRVR+ F
Sbjct: 421 DLRVRFPF 428

[Close]

BLAST of Carg02198 vs. NCBI nr
Match: XP_022938803.1 (uncharacterized protein LOC111444905 isoform X5 [Cucurbita moschata])

HSP 1 Score: 853.2 bits (2203), Expect = 4.0e-244
Identity = 422/430 (98.14%), Postives = 424/430 (98.60%), Query Frame = 0


Query: 24  MDFLSIPKLNLQPNVALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 83
           MDFLSIPKLNLQPNVALPDQTHSDSPSPV SVPSLR DDLPNTMDFNPFATISSIVTSAD
Sbjct: 1   MDFLSIPKLNLQPNVALPDQTHSDSPSPVPSVPSLRRDDLPNTMDFNPFATISSIVTSAD 60

Query: 84  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 143
           DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN
Sbjct: 61  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 120

Query: 144 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 203
           DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE
Sbjct: 121 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 180

Query: 204 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 263
           SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER
Sbjct: 181 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 240

Query: 264 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 323
           DNLSAVVDGAEELSLASGFSNEEE+GEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ
Sbjct: 241 DNLSAVVDGAEELSLASGFSNEEEAGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 300

Query: 324 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 383
           DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLL EELVACAVCKD
Sbjct: 301 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLTEELVACAVCKD 360

Query: 384 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 443
           KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT
Sbjct: 361 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 420

Query: 444 DLRVRYNFEL 454
           DLRVR  + L
Sbjct: 421 DLRVRMRYRL 430

[Close]

BLAST of Carg02198 vs. TAIR10
Match: AT3G02340.1 (RING/U-box superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 2.2e-42
Identity = 116/359 (32.31%), Postives = 182/359 (50.70%), Query Frame = 0


Query: 101 ERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGP-DPFTHSANDLGISGFEDTGEIESH 160
           +RD+ C     F          ++SD +   +S P D F   ++D+ ++ + ++G + + 
Sbjct: 44  DRDIDCNPYFPFTGPISDSGSGSYSDSEPDPNSCPIDFFDRDSSDVDVAEYLESGGLTAG 103

Query: 161 YIEELWSAFAMESDSRVSEVDV-----SMPVADSTTSGLRIVDVDSDSESDNGMIGALQL 220
               +W  +  + D    E+ +      +   DS   GLR+  +DSDS+ ++G+   +  
Sbjct: 104 DY-NIWGFYDPKEDEEEEEIVLGTSGSDLQPGDSGEQGLRVTGIDSDSDCEDGVFDFISE 163

Query: 221 VTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDERDNLSAVVDGAE 280
            +  +  ND+  VE    L   +   F G+     D EWEEV+  +    N +A     +
Sbjct: 164 DSSGNRGNDSGRVEVGTGLPPVWDHLF-GEGTVLADEEWEEVQNAI----NWTAFSGPED 223

Query: 281 ELSLASGFSNEEESGEEAGR--WEILLVMNDIVRNTNWER-------DNDAEAYI----A 340
           E                     W++LL +N++V              D D + Y+     
Sbjct: 224 EXXXXXXXXXXXXXXXXXHELDWQVLLTVNNVVNYIEQAEGIMLNPDDIDPDYYLYLSGL 283

Query: 341 DQDDYMYAGEY--DTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACA 400
           D+ D  ++G Y  D + GQ  ++E  ++G+PPAAKS +++LP+VEL  E L     V CA
Sbjct: 284 DEFDENHSGHYDADAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDKGNNV-CA 343

Query: 401 VCKDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAG 439
           VCKD+  +EEKVR+LPC+H+YH +CI+PWL IRNTCPVCRYELPTDD +YER KS   G
Sbjct: 344 VCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDLEYERHKSSERG 395

[Close]

BLAST of Carg02198 vs. TAIR10
Match: AT5G08139.1 (RING/U-box superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 3.4e-35
Identity = 102/295 (34.58%), Postives = 154/295 (52.20%), Query Frame = 0


Query: 171 ESDSRVSEVDVSMPVADSTTSG--LRIVDVDSDSESDNGMIGALQLVTGDDGENDA---- 230
           + D  V   D  +   D  +SG  +R++ V+S S+ D+G+    +L   D  E D     
Sbjct: 82  DDDFFVGRTDFGLEFRDIASSGNDIRLITVESGSDDDDGVENERELWGIDLNEEDVYVND 141

Query: 231 NWVENPNPLSDSFSFCF-----QGQRIPYEDFEWEEVE-----------------ERVDE 290
                   +S +   C+     + + +  ++F+WEEV                   ++D 
Sbjct: 142 XXXXXXXDVSVTIPLCWDSLQLEDREVTADEFDWEEVXXXXXXXXXXXREIRSGFAQIDM 201

Query: 291 RDNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYI-A 350
            D   +++  +  +SL    + E   G     WE+LL   +     N++ DN  E YI  
Sbjct: 202 ND--ESLISASPIISLEGLVTRERAEGSGNLGWEVLL---NHTLEINFDVDN-RELYIGG 261

Query: 351 DQDDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVC 410
           D DDY+   +YD LF QF + E ++ G PP +KS + NLP+V L+ EN     LV CAVC
Sbjct: 262 DHDDYVQ--DYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLV-CAVC 321

Query: 411 KDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRR 437
           KD+ ++  K  +LPC H YH +CI+PWL +RNTCPVCRYELPTDD +YE+RK++R
Sbjct: 322 KDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRKTQR 367

[Close]

BLAST of Carg02198 vs. TAIR10
Match: AT5G15820.1 (RING/U-box superfamily protein)

HSP 1 Score: 146.0 bits (367), Expect = 5.8e-35
Identity = 70/139 (50.36%), Postives = 94/139 (67.63%), Query Frame = 0


Query: 295 WEILLVMNDIVRNTNWERDNDAEAYIADQDDYMYAGEYDTLFGQFVENENALKGSPPAAK 354
           WEILL  N      +   D D E ++   D Y    +Y+ + GQ  +NE  +KG+PPA+K
Sbjct: 213 WEILLYDN---MTNSAPMDLDVEVWLDSVDGYA-PMDYNAIIGQMFDNETGIKGTPPASK 272

Query: 355 SSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNT 414
           S V+ LP VEL  E L +  +V CA+CKD+   +EKV++LPC HYYH +CI+PWL IRNT
Sbjct: 273 SVVDGLPDVELTIEELSSVSIV-CAICKDEVVFKEKVKRLPCKHYYHGECIIPWLGIRNT 332

Query: 415 CPVCRYELPTDDPDYERRK 434
           CPVCR+ELPTDD +YER++
Sbjct: 333 CPVCRHELPTDDLEYERKR 346

[Close]

BLAST of Carg02198 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-29
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 325 DYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDK 384
           DY +    + L  Q  EN+    G+PPA+KS+++ LP V++ T+++L  E+  CAVC D+
Sbjct: 164 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKV-TKDMLKSEMNQCAVCMDE 223

Query: 385 FSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGG 441
           F     V+++PC H +H DC+LPWL + N+CPVCR+ELPTDDPDYE R     G G
Sbjct: 224 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSG 278

[Close]

BLAST of Carg02198 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28
Identity = 75/195 (38.46%), Postives = 114/195 (58.46%), Query Frame = 0


Query: 249 EDFEWEEVEERVDERDNLSAVVDGAE----ELSLASGFSNE-----EESGEEAGRWEILL 308
           ED EWEEV+   DER+ LS + +  +     +S+A+  S E     E  G     WE+LL
Sbjct: 230 EDCEWEEVDSD-DEREVLSVLAEADDNNSVSVSVAATISLEDLAISERRGSSNLGWEVLL 289

Query: 309 VMNDIVRNTNWERDNDAEAYIADQD-------DYMYAGEYDTLFGQFVENENALKGSPPA 368
               +  N + + +++ E YI D D       DY++  EY+ LF   + +     G PPA
Sbjct: 290 NSRSLEFNLD-DAESNLELYIGDIDHEEEDYEDYLHTTEYEMLFEAEISSG---IGKPPA 349

Query: 369 AKSSVENLPLVELKTENLLA--EELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILPWLN 426
           +KS ++NL +  L  E+++   ++ V CAVCK++  + ++V +LPC H YH +CI+PWL 
Sbjct: 350 SKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLG 409

[Close]

BLAST of Carg02198 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-27
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0


Query: 325 DYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDK 384
           DY +    + L  Q  EN+    G+PPA+KS+++ LP V++ T+++L  E+  CAVC D+
Sbjct: 164 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKV-TKDMLKSEMNQCAVCMDE 223

Query: 385 FSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGG 441
           F     V+++PC H +H DC+LPWL + N+CPVCR+ELPTDDPDYE R     G G
Sbjct: 224 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQGSG 278

[Close]

BLAST of Carg02198 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26
Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 321 ADQDDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAV 380
           A+  DY      + L  Q  EN+    G+PPA+KS++E LPLV + T++ L  E   CAV
Sbjct: 168 ANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNI-TKSNLNSEFNQCAV 227

Query: 381 CKDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERR 433
           C D F    + +++PC H YH DC+LPWL + N+CPVCR+ELPTDDPDYERR
Sbjct: 228 CMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERR 278

[Close]

BLAST of Carg02198 vs. Swiss-Prot
Match: sp|O22283|RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.0e-22
Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 0


Query: 350 PPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILPWL 409
           PPA+KS++E LPL+E+   +LL++    CAVCK+ F ++   R++PC H YH DCILPWL
Sbjct: 173 PPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWL 232

Query: 410 NIRNTCPVCRYELPTDD 427
            IRN+CPVCR+ELP +D
Sbjct: 233 AIRNSCPVCRHELPAED 249

[Close]

BLAST of Carg02198 vs. Swiss-Prot
Match: sp|Q940T5|RDUF2_ARATH (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-19
Identity = 41/78 (52.56%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 348 GSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILP 407
           G+PPA+KS++E+LP VE+   ++ +E    CAVC + F  E + R++PC H +HDDCI+P
Sbjct: 171 GNPPASKSAIESLPRVEISDCHIGSE--ANCAVCTEIFETETEAREMPCKHLFHDDCIVP 230

Query: 408 WLNIRNTCPVCRYELPTD 426
           WL+IRN+CPVCR+ELP++
Sbjct: 231 WLSIRNSCPVCRFELPSE 246

[Close]

BLAST of Carg02198 vs. Swiss-Prot
Match: sp|Q6GPV5|RN181_XENLA (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.2e-19
Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 350 PPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDDCILPWL 409
           PPA+K  VE+LP V +  E   A+  + C VC  +F   E VR+LPC H +H  CILPWL
Sbjct: 53  PPASKKVVESLPKVTVTPEQ--ADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWL 112

Query: 410 NIRNTCPVCRYELPTDDPDYERRKSRRA 438
              N+CP+CR+ELPTD PDYE  K  +A
Sbjct: 113 GKTNSCPLCRHELPTDSPDYEEFKQEKA 138

[Close]

BLAST of Carg02198 vs. TrEMBL
Match: tr|E5GCS9|E5GCS9_CUCME (Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.2e-188
Identity = 333/416 (80.05%), Postives = 366/416 (87.98%), Query Frame = 0


Query: 40  LPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSADDSFPFDTDWFSDADSE 99
           LPDQTH++SPSPV S+PSLR +D PN MDFNPFAT+ SIVT+AD S PF+TDWFSD+DSE
Sbjct: 3   LPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAADVSLPFETDWFSDSDSE 62

Query: 100 SERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSANDLGISGFEDTGEIESH 159
           S+RDV+CFVTDLFENR FTD LH   D+DRGLDS  DPFTHS NDLG+SGFED+GEI S+
Sbjct: 63  SDRDVNCFVTDLFENRSFTDPLH---DHDRGLDSVLDPFTHSVNDLGVSGFEDSGEIVSN 122

Query: 160 YIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSESDNGMIGALQLVTGDD 219
           YIEELWS F +ESD+RVSEVDVSM +ADS T+GLR+VDV        GMIGALQLVTGDD
Sbjct: 123 YIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXXXXPGMIGALQLVTGDD 182

Query: 220 GENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDERDNLSAVVDGAEELSLA 279
            END NWVE+ NP+SD+F+FCFQGQRI YEDFEWEE+EERVDER+  S VVD AEELSLA
Sbjct: 183 VENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDEREISSVVVDRAEELSLA 242

Query: 280 SGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQDDYMYAGEYDTLFGQF 339
           SGFSNEEE GEEAGRWEILLVMNDI RN      NDAEAYIADQDDYMYA EYDTLFGQF
Sbjct: 243 SGFSNEEEPGEEAGRWEILLVMNDIGRN------NDAEAYIADQDDYMYAAEYDTLFGQF 302

Query: 340 VENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHY 399
           VEN+NALKGSPPAAKS+VENLPLVELKTEN LAEE+V CAVCKDKFSMEEKVRKLPC HY
Sbjct: 303 VENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKDKFSMEEKVRKLPCGHY 362

Query: 400 YHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQTDLRVRYNFELIA 456
           YHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+S+R  GGLQ+DL+VRYNFELIA
Sbjct: 363 YHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQSDLQVRYNFELIA 409

[Close]

BLAST of Carg02198 vs. TrEMBL
Match: tr|A0A1S4E2J2|A0A1S4E2J2_CUCME (uncharacterized protein LOC103498560 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498560 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 4.6e-188
Identity = 335/425 (78.82%), Postives = 370/425 (87.06%), Query Frame = 0


Query: 26  FLSIPKLNLQPNV--ALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 85
           F SI KL+LQPN+   LPDQTH++SPSPV S+PSLR +D PN MDFNPFAT+ SIVT+AD
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAAD 63

Query: 86  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 145
            S PF+TDWFSD+DSES+RDV+CFVTDLFENR FTD LH   D+DRGLDS  DPFTHS N
Sbjct: 64  VSLPFETDWFSDSDSESDRDVNCFVTDLFENRSFTDPLH---DHDRGLDSVLDPFTHSVN 123

Query: 146 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 205
           DLG+SGFED+GEI S+YIEELWS F +ESD+RVSEVDVSM +ADS T+GLR+VDV     
Sbjct: 124 DLGVSGFEDSGEIVSNYIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXX 183

Query: 206 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 265
              GMIGALQLVTGDD END NWVE+ NP+SD+F+FCFQGQRI YEDFEWEE+EERVDER
Sbjct: 184 XXPGMIGALQLVTGDDVENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDER 243

Query: 266 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 325
           +  S VVD AEELSLASGFSNEEE GEEAGRWEILLVMNDI RN      NDAEAYIADQ
Sbjct: 244 EISSVVVDRAEELSLASGFSNEEEPGEEAGRWEILLVMNDIGRN------NDAEAYIADQ 303

Query: 326 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 385
           DDYMYA EYDTLFGQFVEN+NALKGSPPAAKS+VENLPLVELKTEN LAEE+V CAVCKD
Sbjct: 304 DDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKD 363

Query: 386 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 445
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+S+R  GGLQ+
Sbjct: 364 KFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQS 419

Query: 446 DLRVR 449
           DL+VR
Sbjct: 424 DLQVR 419

[Close]

BLAST of Carg02198 vs. TrEMBL
Match: tr|A0A1S3CAM8|A0A1S3CAM8_CUCME (uncharacterized protein LOC103498560 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498560 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 1.3e-187
Identity = 334/424 (78.77%), Postives = 369/424 (87.03%), Query Frame = 0


Query: 26  FLSIPKLNLQPNV--ALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTSAD 85
           F SI KL+LQPN+   LPDQTH++SPSPV S+PSLR +D PN MDFNPFAT+ SIVT+AD
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHTNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTAAD 63

Query: 86  DSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRGLDSGPDPFTHSAN 145
            S PF+TDWFSD+DSES+RDV+CFVTDLFENR FTD LH   D+DRGLDS  DPFTHS N
Sbjct: 64  VSLPFETDWFSDSDSESDRDVNCFVTDLFENRSFTDPLH---DHDRGLDSVLDPFTHSVN 123

Query: 146 DLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDSDSE 205
           DLG+SGFED+GEI S+YIEELWS F +ESD+RVSEVDVSM +ADS T+GLR+VDV     
Sbjct: 124 DLGVSGFEDSGEIVSNYIEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXXXXX 183

Query: 206 SDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDER 265
              GMIGALQLVTGDD END NWVE+ NP+SD+F+FCFQGQRI YEDFEWEE+EERVDER
Sbjct: 184 XXPGMIGALQLVTGDDVENDGNWVESSNPVSDTFNFCFQGQRISYEDFEWEEIEERVDER 243

Query: 266 DNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYIADQ 325
           +  S VVD AEELSLASGFSNEEE GEEAGRWEILLVMNDI RN      NDAEAYIADQ
Sbjct: 244 EISSVVVDRAEELSLASGFSNEEEPGEEAGRWEILLVMNDIGRN------NDAEAYIADQ 303

Query: 326 DDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKD 385
           DDYMYA EYDTLFGQFVEN+NALKGSPPAAKS+VENLPLVELKTEN LAEE+V CAVCKD
Sbjct: 304 DDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAVCKD 363

Query: 386 KFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQT 445
           KFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+S+R  GGLQ+
Sbjct: 364 KFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRGSGGLQS 418

Query: 446 DLRV 448
           DL+V
Sbjct: 424 DLQV 418

[Close]

BLAST of Carg02198 vs. TrEMBL
Match: tr|A0A0A0KUI4|A0A0A0KUI4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642700 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 4.0e-184
Identity = 334/435 (76.78%), Postives = 368/435 (84.60%), Query Frame = 0


Query: 26  FLSIPKLNLQPNV--ALPDQTHSDSPSPVLSVPSLRHDDLPNTMDFNPFATISSIVTS-- 85
           F SI KL+LQPN+   LPDQTH++SPSPV S+PSLR +D PN MDFNPFAT+ SIVTS  
Sbjct: 4   FFSISKLHLQPNINMPLPDQTHNNSPSPVPSIPSLRREDSPNPMDFNPFATVPSIVTSAA 63

Query: 86  ADDSFPFDTDWFSDADSESERDVSCFVTDLFENRRFTDHLHAFSDYDRG-LDSGPDPFTH 145
           AD S PF+TDWFSD+DSES+RDVSCFVTDLF+NR FTD LH       G L S  DPFTH
Sbjct: 64  ADVSHPFETDWFSDSDSESDRDVSCFVTDLFDNRSFTDPLHDXXXXXXGALFSVLDPFTH 123

Query: 146 SANDLGISGFEDTGEIESHYIEELWSAFAMESDSRVSEVDVSMPVADSTTSGLRIVDVDS 205
           S NDLG+SGFE +GEI S+Y+EELWS F +ESD+RVSEVDVSM +ADS T+GLR+VDV  
Sbjct: 124 SVNDLGVSGFEGSGEIGSNYVEELWSTFGVESDTRVSEVDVSMQIADSITTGLRVVDVXX 183

Query: 206 DSESDNGMIGALQLVTGDDGENDANWVENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERV 265
                 G+IGALQLVTGDD END NWVE+ NP+SD+ + CFQGQRI YEDFEWEEVEERV
Sbjct: 184 XXXXXPGIIGALQLVTGDDVENDGNWVESSNPVSDTLNLCFQGQRISYEDFEWEEVEERV 243

Query: 266 DERDNLSAVVDGAEELSLASGFSNEEESGEEAGRWEILLVMNDIVRNTNWERDNDAEAYI 325
           DER+  S VVD AEELSLASGFSNEEE GEE GRWEIL VMNDI RN      NDAEAYI
Sbjct: 244 DEREISSVVVDRAEELSLASGFSNEEEPGEEVGRWEILFVMNDIGRN------NDAEAYI 303

Query: 326 ADQDDYMYAGEYDTLFGQFVENENALKGSPPAAKSSVENLPLVELKTENLLAEELVACAV 385
           ADQDDYMYA EYDTLFGQFVEN+NALKGSPPAAKS+VENLPLVELKTEN LAEE+V CAV
Sbjct: 304 ADQDDYMYAAEYDTLFGQFVENDNALKGSPPAAKSAVENLPLVELKTENTLAEEVVVCAV 363

Query: 386 CKDKFSMEEKVRKLPCAHYYHDDCILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGG 445
           CKDKFSMEEKVRKLPC HYYHDDCILPWLNIRNTCPVCR+ELPTDDPDYERR+S+RA GG
Sbjct: 364 CKDKFSMEEKVRKLPCGHYYHDDCILPWLNIRNTCPVCRHELPTDDPDYERRQSQRASGG 423

Query: 446 LQTDLRVRYNFELIA 456
           LQ+DL+VRYNFELIA
Sbjct: 424 LQSDLQVRYNFELIA 432

[Close]

BLAST of Carg02198 vs. TrEMBL
Match: tr|A0A2P5BGE8|A0A2P5BGE8_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_321970 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 7.4e-77
Identity = 183/410 (44.63%), Postives = 241/410 (58.78%), Query Frame = 0


Query: 62  DLPNTMDFNPFAT-----ISSIVTSADDSFPFD---TDWFSDADSESERDVSCFVTDLFE 121
           D  +  + NPFA+     +SS VT  D   P     +DWFS++ SES+RD+SCFVTDLF+
Sbjct: 41  DATDDHNCNPFASASTSFVSSPVTLVDAVGPGSSCASDWFSESGSESDRDISCFVTDLFD 100

Query: 122 NRRFTDHLHAFSDYDRGLDSGPDPFTHSANDLGISGFEDTGEIESHYIEELWSAFAMESD 181
            R    H  A+ D++ GL         S NDL I G            E           
Sbjct: 101 RRGSEQHDVAYGDWNSGL---------SLNDLVIGG-----------SEVXXXXXXXXXX 160

Query: 182 SRVSEVDVSMPVADSTTSGLRIVDVDSDSESDNGMIGAL---QLVTGDDGENDA---NWV 241
                             GLR+V  DS+SES++G  G L    L   D G+ ++   +W 
Sbjct: 161 XXXXXXXXXXXXXXXXXXGLRVVGFDSESESEDGNFGVLGFNSLHDNDSGDRNSRVNDWD 220

Query: 242 ENPNPLSDSFSFCFQGQRIPYEDFEWEEVEERVDERDNLSAVVDGAEELSLASGFSNEEE 301
            + NP       C + +R  +E+F+WEEVEERV+ER+NLS V+D   E   A       E
Sbjct: 221 NHDNP-------CLEDERSFFEEFDWEEVEERVNERENLSIVIDDYVEEVPAGEDEEASE 280

Query: 302 SGEEAGRWEILLVMNDIVRNTNWER--DNDAEAYIADQDDYMY--AGEYDTLFGQFVENE 361
            G  +  WEILL +N++  N++ ER  D+  ++Y+A QDDY Y    EY++LF QF+E E
Sbjct: 281 EGVRSLEWEILLAINNLAMNSSLERNVDSGTDSYLAVQDDYTYTVGVEYESLFEQFIETE 340

Query: 362 NALKGSPPAAKSSVENLPLVELKTENLLAEELVACAVCKDKFSMEEKVRKLPCAHYYHDD 421
           +ALKGSPPAAKS VENLP VEL  E L+ +++V CAVCKD+  ++EKV++LPC+H YH D
Sbjct: 341 SALKGSPPAAKSVVENLPFVELTVEELMKDDVV-CAVCKDQIVVKEKVKRLPCSHCYHGD 400

Query: 422 CILPWLNIRNTCPVCRYELPTDDPDYERRKSRRAGGGLQTDLRVRYNFEL 454
           CI+PWL IRNTCPVCRYELPTDD DYERRKS+RA  GL  D +V +NFEL
Sbjct: 401 CIVPWLGIRNTCPVCRYELPTDDLDYERRKSQRAHRGLSMDSQVIFNFEL 422

The following BLAST results are available for this feature:

BLAST of Carg02198 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938801.1	1.0e-247	99.07	uncharacterized protein LOC111444905 isoform X3 [Cucurbita moschata]	[more]
XP_022992755.1	5.1e-247	98.84	uncharacterized protein LOC111488995 isoform X4 [Cucurbita maxima]	[more]
XP_023549550.1	8.7e-247	98.84	E3 ubiquitin ligase BIG BROTHER-related-like isoform X4 [Cucurbita pepo subsp. p...	[more]
XP_022938800.1	3.1e-244	98.60	uncharacterized protein LOC111444905 isoform X2 [Cucurbita moschata]	[more]
XP_022938803.1	4.0e-244	98.14	uncharacterized protein LOC111444905 isoform X5 [Cucurbita moschata]	[more]

BLAST of Carg02198 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02340.1	2.2e-42	32.31	RING/U-box superfamily protein	[more]
AT5G08139.1	3.4e-35	34.58	RING/U-box superfamily protein	[more]
AT5G15820.1	5.8e-35	50.36	RING/U-box superfamily protein	[more]
AT3G19950.1	6.2e-29	46.55	RING/U-box superfamily protein	[more]
AT5G60820.1	1.1e-28	38.46	RING/U-box superfamily protein	[more]

BLAST of Carg02198 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LPN7\|RNG1L_ARATH	1.1e-27	46.55	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|P0CH30\|RING1_GOSHI	1.6e-26	50.00	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|O22283\|RHC2A_ARATH	7.0e-22	55.84	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q940T5\|RDUF2_ARATH	1.1e-19	52.56	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
sp\|Q6GPV5\|RN181_XENLA	4.2e-19	51.14	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1	[more]

BLAST of Carg02198 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCS9\|E5GCS9_CUCME	1.2e-188	80.05	Zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S4E2J2\|A0A1S4E2J2_CUCME	4.6e-188	78.82	uncharacterized protein LOC103498560 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3CAM8\|A0A1S3CAM8_CUCME	1.3e-187	78.77	uncharacterized protein LOC103498560 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KUI4\|A0A0A0KUI4_CUCSA	4.0e-184	76.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642700 PE=4 SV=1	[more]
tr\|A0A2P5BGE8\|A0A2P5BGE8_9ROSA	7.4e-77	44.63	43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_321970 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02198-RA	Carg02198-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 378..418 e-value: 4.8E-7 score: 39.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 378..419 e-value: 1.4E-11 score: 44.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 378..419 score: 12.357
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 337..425 e-value: 5.0E-21 score: 76.2
None	No IPR available	PANTHER	PTHR44679	FAMILY NOT NAMED	coord: 315..438
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 378..419 e-value: 1.1881E-23 score: 92.3808
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 366..425

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02198	Cla016492	Watermelon (97103) v1	carwmB0260
Carg02198	Csa5G642700	Cucumber (Chinese Long) v2	carcuB0293
Carg02198	MELO3C022061	Melon (DHL92) v3.5.1	carmeB0260
Carg02198	ClCG11G005060	Watermelon (Charleston Gray)	carwcgB0255
Carg02198	CSPI05G29680	Wild cucumber (PI 183967)	carcpiB0297
Carg02198	Cucsa.238420	Cucumber (Gy14) v1	carcgyB0316
Carg02198	CmaCh04G028260	Cucurbita maxima (Rimu)	carcmaB0374
Carg02198	CmaCh15G002110	Cucurbita maxima (Rimu)	carcmaB0362
Carg02198	CmoCh04G029550	Cucurbita moschata (Rifu)	carcmoB0370
Carg02198	CmoCh15G002230	Cucurbita moschata (Rifu)	carcmoB0362
Carg02198	Lsi03G001970	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02198	Cp4.1LG13g08070	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02198	Cp4.1LG01g22200	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02198	CsGy5G029120	Cucumber (Gy14) v2	carcgybB0280
Carg02198	MELO3C022061.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02198	CsaV3_5G038810	Cucumber (Chinese Long) v3	carcucB0296
Carg02198	Cla97C11G211880	Watermelon (97103) v2	carwmbB0269
Carg02198	Bhi06G000247	Wax gourd	carwgoB0339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02198	Carg05907	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02198	Cucurbita maxima (Rimu)	carcmaB0365
Carg02198	Watermelon (Charleston Gray)	carwcgB0254
Carg02198	Watermelon (97103) v2	carwmbB0274
Carg02198	Wax gourd	carwgoB0353