Carg12398 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12398
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Copper transporter
Location	Cucurbita_argyrosperma_scaffold_074 : 751721 .. 756851 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTCTGCTCATACAAGTCGTAACGAGTGTGCGAATGGGTTTTGATTAAATCCTGAAAGAGACTGCGCTCTTATCAGTTATCTGAAACCAAGCGGACTCGTTGGTACCACACACCATTTTCAGTCACCGGAGTCGCCATGGACGCTACCGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGCCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACCAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGCTCCGGTATGTACGCCTTGGCCTTGATCTTCATTTTCGTGCTTGCTTTTGTCGTCGAGTGGCTTTCGCATAGCCGATTGATTAAGGAAGATTCTAGCTCCGTAGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGAAATCGATGTTGAAGGAATGTGGAAATCTGCAATTGAATTGTGAAATTATCTGATCTGAGTTGAACTCGTGCTGATGAATTTTTCGATTTGGCTGATTCGATTTGGAATTTTGAAAGTTCAAAACCGAAATTTGTTTTCTGGAATTCTTGCAGCTTATGTGAAGTTATAACAGAAGGGAAATTGATAATTTGGAATGCTTGGATTCAGATTCCGGGATAATCCGTTAGTAATTTTCTTCTTCTTCACAGTAATATTTCGTCGTTCTTCATTTGGATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAATTGTAAGGAAAAACTCAGAAGATATTCATCCTGTTTACTGAGATTATCGATAGAATTAGGAAAAAGAAATTTTACAATTATTATTATTATTTGAGAGTTTTATTTTCTTTTTTATATTTTTATAATTAGCCTTAAATTTTCTTGCCTTTTCAAAATTTAAAAAATTTGAATTATATTTTGAAAATATACATTTATTTATTTATTTATTTTCCTTTCCCCCCCTTTTAATTATTTTGGTTGAATTAATAAATTATCAAAGAAAATTGTGAAATTCAAATCTCTATTACATCCGTGAACATATGTTTTGTTTTCTACTGCAAATTTAGATAACGTGCAAGCTGCCGATTTTCTTTTTCTTTTTCCAATGATTAATTTATTATTTATTTAAATACTACTTTATTCTCGTATTTTAGTATTAATTTATTTTGGTGTCTCTATTTTAAAAAAAAAAACATTTTTGGTTTTCATTATTTGTAAAATTTAGCTTAAATTTTTAATTACATGGGGACCAAAATTGACAACAAAAATAATAATAAAAGCATATTGAGAAAGATTGACGTTTTATTACAAAGACTATAATGTTTAAAATTTTATTATTTTATTTTTAAATATTGATTTAGCTTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTGAACGGTTGAAATAAATTTAGAAAATTAGAATGTTGCGTCAGCATCAACAAGAGTAGCCAATTATACGGGAACACGTGGATATGGAAAGTCAAGAAAGATAGGGTTTAGAGACGGCTGCCCTTTCTTTACTGCATTAATTGAATTGAAATTAGCTTATGAATTTTGCAATACAATAAATATTTAATAATTGCATGAGTGAAATTTATACTCAAATCAACCAATTTGATTACATTTGATATGACTTTTCAAATAGCTTAGATTATTAATATCATTAAGTCAAGTTTTGAAATTTTCAAAATTAATTATATAATTTTATTTTTAAAACTTAGTTTGAAATTTAATGGTTACCGAATGATGTATTAATATCAATAATTGTGTTATAATTTCCTCTCATCATAATTTCCTCTCATCATTTTAAAATTCTTTAATATCGAGTAAAATTTGACGCTTTTCAACTAATAAATTCTATTAAAATATTTTTAATGTAGGGTTTTATTCATGTTACTCATTTAACATTTTGGATTATGATAATTTAATGGTAACCCAAATTTAAGATTTTATTATTACTCTAATTAAAGTGTTATATTCCTTCTATTAGCCACCGAAGTCATTTCTTTCAATGTTCCTGCTTTAGACATAATCCTAAAATGTATAGATACGATAAACTTACCTTTCTCTTTTTGCTATAATGGTGACGATCGAGCATGATATCCAATAGAGACATGTTATTCGATCAACCAATGTCCATTATTTAAAGCTATTCTTCAATATATAGTTGTAAATAAGTATTCACACAAAGAAAATTGGACCTCACACTCACTTTCTCACATCTTTCACTCGAAGGATATAATGTCACTCGAGTTTACGCTCATAGATGTAAGACTTGCTTTTCAAACATGTCTACCTGTTACCTCACAATCACTTGTGGTAATAGGTAGCCAAATAAAAGTCTGTGACATCAACTATTTTAAAAAGTGAGTTCTTAAACATAAAATGTTTCTAAAAGCTTAAGTACTCGAAATAGAAAAATCACACTTTTATTTCTCAAAAACTAGAAACAAGAAACAATTGATAAAAGACAATAACTCGATCACACAAGCTATTAGTGTATTAATGTGATTATTAGAGTTTAATCTTAAAATTTTCACCTTCTTGAAGATAGGTGGATTAAATTAATGGTTTAAGGTTTGTTTTTGTTGGCTTTAAAATGAAGCCTTTATTGGTCTGACCATTCATGCATAAACAAGCCCAATAAAGAAATCGCTCGGTAACACTGCTGAACTCCCAAGGAGTAGAATGAGAGATCTCACATTGATGGTAGAGAGGAATGAATCAATTCTTATAAGGGTGCATAAATCTCTTCCTAAAAAATCCATTTTAAAAACGAAACATTTCTCACAAGGGATTGAGGCTAATATTTATATGTAACGGGCTAAAACTAATTTCTTTGGATTCGCTGCTCCGTTAAATGATATCTAAACTAAACCAAACTTATTTTGTTTTCATTATTTATTTTAATTTATTCAAATGATAAAGAAATTGGAAATAAGAAATAAGACCAATAATAATATAATGTAAAATTAAATAAAATAAAGAATAATTAATTAAACTAATCCTTTTACTTATACTAAAAATCTATGATTATTATGACTTTAATTTAATCTCTCAATTAATTATTTTTTTATTGCTGAAATAATGTTATAAAATATAGAAAAAGTCTTACAAATAATAATAATAATAATAATAATATTAAAAGGCATGAAACATGCTATTTCATCTCTACCTTATCATGGTCAACCATCTTTGTGTCGAACCTTTAGTTCTGCTGACTTACAAGATATAACCTTCGCCACGACATTAATGACTTAACTCTTCACGTTTTTTTCCGAAAACTTAATTAGAAAAATTAAATAATAATATATTTAAAATTAGAGTTTTATTTGTTCAAATTTTAATTTTGCGTGTTTTAATTATTGTTTAGACACTCAAAAGAAAATAACTCATTTTTACCGTTTTTATCTTTAGTTCATGATGTTAAGTCTTGCATAAGCGTGTATGGTGTCTAGATCGACCTTACCAACTTTTGTGGTTAAATCACGATTTGTTACCTTCGGTTCATGATGTTAAGTCTTTCGTGACTAGTGTCATGGTTATGTTTGTCCAAGGCGTGTTGTCCATGGCCGCATGTCCATGCCACACTGAACCCTTTATTTTATTTCATGTTGTATTGAGTTACTATTGTATTTTCTGTTTGTTTGATCGTTCGGCAAAATCATGTTTAGGTCTAATAGACCTGAATCGCCCCAAAATGTATTATAGGGGATGCGAATAGTTATCAGATTCTCCCTACCCATAAAAGTTATATGCTAATTACTTCGATGTGTTACCTTGCTTGTATGTCGTATAACATTGCTTTCAATCTCTCTCCATCTTATTTTCAAACTCTCTTTGCCCTCGTTTTCTAAAATCTTCTCCTCAAATCGGGGCCAAAAGCTTGAGTATATATTGTTCGGCCAGACAACACAAATTCAAATTGACTTGACTCACTTGCTGTTGATAAGTGAGTATCACACGATCGCAAAATCTATTGTCAAGAAAAGTGTGATTGTAATAACTAGCACCGATAGGCCTACATGGTGTCCAAATGGATGTTACTAATTTTTGTAGCGGGCGCTAGAGAGGTTATTAAGCCGCAACATAAAAATAAAAATAAAAATGAAATCTATTTTTAGAAATTTATTAAATTTCATTGACCATAAATTTTAAAAACTAATTATATATATATATAAATTTGTACTACATATAAAATATAGTACAACTACCATTAGTACAGTCATATATAAATAAAAATTAAAAAAATTTAGCTATAAAATTGAGTGAAGATTATCATTTTTCTCAAAGTCAACAAACAAACAGATTGGCAAAATGAAGAACACAACAAAAATCTTAATTCTCTGTCTTGTAATTTCTCTGTCTTTCTCTTCCAAAGCCAAAGCCCACGATGTTTTTCCCAACCACGACGGTATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACAATGATGCACATGACGTTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAAACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTCGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCACGAAGAACACGAATTCAAAGCCGTACGATCAGAGTACAGCTGATCTTCCATCTGGGGTTTGCTGA

mRNA sequence

GGCTTCTGCTCATACAAGTCGTAACGAGTGTGCGAATGGGTTTTGATTAAATCCTGAAAGAGACTGCGCTCTTATCAGTTATCTGAAACCAAGCGGACTCGTTGGTACCACACACCATTTTCAGTCACCGGAGTCGCCATGGACGCTACCGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGCCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACCAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGCTCCGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTACCAAAGCCCACGATGTTTTTCCCAACCACGACGGTATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACAATGATGCACATGACGTTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAAACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTCGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCACGAAGAACACGAATTCAAAGCCGTACGATCAGAGTACAGCTGATCTTCCATCTGGGGTTTGCTGA

Coding sequence (CDS)

ATGGACGCTACCGACGAGACTCACCACCACCATATGCAAGGTATGGCGCCGCCGCCGGCCTCTTCCGCCGCGTCGCCGGGGATGACGATGCATCACCGGATGATGCACATGACCTTCTTTTGGGGAACCAACGCTGAGATTCTGTTCCGTAACTGGCCTGGAGACCGCTCCGCGGCTGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTGGCGTATTTAGTGATGCTTGCGGTTATGTCGTTCAATGTTGGAGTGTTTTTGGTAGCAATCGGTGGTCATTGCCTCGGATTCTTCTTCTTTGGGAGTAGATTTTTCAAGAATTCAGGCGCGGCTTCTGGTAAATCCTCTGATCTTCCTCCTCTTACCAAAGCCCACGATGTTTTTCCCAACCACGACGGTATGCACTCCGACCCTCCGCCGCCGCCGATGGGTCCGATGAGCGGCGGCTCCGACGACGACATGCACTCTCACGGGATGCCGTCGTCATCGGGCATGACAATGATGCACATGACGTTCTTCTGGGGAAAAAACACCCAAGTTTTATTCTCCGGCTGGCCGGGCAACCAGTCCGGCATGTATGCGCTGGCGTTGATATTGGTGTTTTTGCTGGCGGTGTCTGTAGAGTGGCTGTCTCGTTGGCGGCTGATGACCGAGATGGGGCCGAGAAATTTCGCCGCTGGGATCGTGCAAACGGCGGTGCATGGGGTTAGAATTGGAATTGCGTACATGGTTATGCTCGCTTTGATGTCGTTCAACGGCGGCGTTTTTATCGCTGCCATCGCCGGTCATTCATTTGGGTTTCTGATTTTTGGGAGCAGAGTCACGAAGAACACGAATTCAAAGCCGTACGATCAGAGTACAGCTGATCTTCCATCTGGGGTTTGCTGA

Protein sequence

MDATDETHHHHMQGMAPPPASSAASPGMTMHHRMMHMTFFWGTNAEILFRNWPGDRSAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLPPLTKAHDVFPNHDGMHSDPPPPPMGPMSGGSDDDMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC

Homology

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BLAST of Carg12398 vs. NCBI nr
Match: XP_022998908.1 (copper transporter 6-like [Cucurbita maxima])

HSP 1 Score: 307.4 bits (786), Expect = 5.4e-80
Identity = 168/172 (97.67%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 127 AHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS 186
           AHDVFPNHDGMHSD XXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS
Sbjct: 24  AHDVFPNHDGMHSDPXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS 83

Query: 187 GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM 246
           GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM
Sbjct: 84  GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM 143

Query: 247 VMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           VMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNT SKPYD  TADLPSGVC
Sbjct: 144 VMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTKSKPYDPGTADLPSGVC 195

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BLAST of Carg12398 vs. NCBI nr
Match: XP_023525857.1 (copper transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 2.1e-79
Identity = 168/172 (97.67%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 127 AHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS 186
           AHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS
Sbjct: 24  AHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFS 83

Query: 187 GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM 246
           GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM
Sbjct: 84  GWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYM 143

Query: 247 VMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           VMLALMSFNGGVFIAAIAGHSFGFLIFGSRV  NT SKPYDQ TADLPSGVC
Sbjct: 144 VMLALMSFNGGVFIAAIAGHSFGFLIFGSRVLNNTKSKPYDQGTADLPSGVC 195

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BLAST of Carg12398 vs. NCBI nr
Match: XP_022948632.1 (copper transporter 6-like [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 6.0e-79
Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 126 KAHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLF 185
           KAHDVFPNHDGMHSD XXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLF
Sbjct: 23  KAHDVFPNHDGMHSDPXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLF 82

Query: 186 SGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY 245
           SGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY
Sbjct: 83  SGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAY 142

Query: 246 MVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           +VMLALMSFNGGVFIAAIAGHSFGFLIFGSRV  NT SKPY Q TADLPSGVC
Sbjct: 143 LVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVMNNTKSKPYQQGTADLPSGVC 195

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BLAST of Carg12398 vs. NCBI nr
Match: XP_021278651.1 (copper transporter 1-like [Herrania umbratica])

HSP 1 Score: 242.3 bits (617), Expect = 2.1e-60
Identity = 140/298 (46.98%), Postives = 174/298 (58.39%), Query Frame = 0


Query: 35  MHMTFFWGTNAEILFRNWPGDRS---------------------------------AAGL 94
           MHMTFFWG NAEILF  WPG R+                                  AG+
Sbjct: 29  MHMTFFWGKNAEILFSGWPGTRTGMYVLALIVVFVLGFMVEWISHSQLIKPGSTHVGAGV 88

Query: 95  IRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGA-ASGKSSD 154
           ++TL+H +RVGLAYLVMLAVMSFN GV L A+ GH LGF  FGSR FK S A A GK+SD
Sbjct: 89  VQTLLHALRVGLAYLVMLAVMSFNGGVLLAAVAGHTLGFLLFGSRVFKKSSAPAPGKTSD 148

Query: 155 LPPLTKAHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKN 214
           LPP +    V  NHD  HS                   + G            TFFWGKN
Sbjct: 149 LPPTS---CVEMNHD--HS------MGGMAPASQSTNGTSGXXXXXXXXXXXXTFFWGKN 208

Query: 215 TQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVR 274
            ++LFSGWPG ++GMY LALIL+F+LA  VEWLS    + + G  N +AG++QT +H +R
Sbjct: 209 AEILFSGWPGTRAGMYGLALILIFVLAFLVEWLSHSNHLIKRGSSNVSAGLLQTFLHAIR 268

Query: 275 IGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           + +AY+VMLA+MSFNGGVF+ A+AGH+ GFL+FGSR+ K        + T+DLP   C
Sbjct: 269 VALAYLVMLAVMSFNGGVFLMAVAGHTLGFLLFGSRMFKKKTEMLSYEKTSDLPPMSC 315

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BLAST of Carg12398 vs. NCBI nr
Match: KGN65762.1 (hypothetical protein Csa_1G526820 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 3.8e-57
Identity = 114/169 (67.46%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 130 VFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWP 189
           + P HDGMH D                MH+H M SS+    MHMTFFWGKNTQVLFSGWP
Sbjct: 29  LLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSA----MHMTFFWGKNTQVLFSGWP 88

Query: 190 GNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVML 249
           G++SGMYA+AL+ VFLLAV+VEWLS WR+MTE+GPRN AAGIVQTAVHG+R+GIAY+VML
Sbjct: 89  GDRSGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPRNVAAGIVQTAVHGIRMGIAYLVML 148

Query: 250 ALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           ALMSFNGGVFI A+AGH  GFL+FGSRV K   S  YDQ T DLPS VC
Sbjct: 149 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTVDLPSRVC 193

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BLAST of Carg12398 vs. TAIR10
Match: AT2G26975.1 (Ctr copper transporter family)

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 164 SSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMG 223
           ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+VFLLAV VEWL+   ++   G
Sbjct: 18  TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRG 77

Query: 224 PRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKN--T 283
             + A G+VQTAV+ ++ G+AY+VMLA+MSFNGGVFI AIAG + GF++FGS   KN   
Sbjct: 78  STSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSD 137

Query: 284 NSKPYDQ 289
           + KP++Q
Sbjct: 138 DEKPFEQ 144

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BLAST of Carg12398 vs. TAIR10
Match: AT3G46900.1 (copper transporter 2)

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-35
Identity = 75/129 (58.14%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 172 HMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGI 231
           HMTFFWGKNT+VLFSGWPG  SGMYAL LI++FLLAV  EWL+   ++   G  N AAG+
Sbjct: 31  HMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGL 90

Query: 232 VQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTA 291
            QTAV+ ++ G++Y+VMLA+MSFN GVFI AIAG+  GF +FGS   K  +    DQ TA
Sbjct: 91  AQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTA 150

Query: 292 DL--PSGVC 299
           +L  PS  C
Sbjct: 151 ELLPPSSGC 156

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BLAST of Carg12398 vs. TAIR10
Match: AT5G59030.1 (copper transporter 1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-32
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 176 FWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQ 235
           FWGKNT+VLFSGWPG  SGMYAL LI VF LAV  EWL+   L+  +     N AAG++Q
Sbjct: 47  FWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQ 106

Query: 236 TAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADL 295
           TAV+ +RIG+AY+VMLA+MSFN GVF+ A+AGH+ GF++FGS+  +NT+    D+ T  +
Sbjct: 107 TAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSD---DRKTNYV 166

Query: 296 PSGVC 299
           P   C
Sbjct: 167 PPSGC 168

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BLAST of Carg12398 vs. TAIR10
Match: AT5G59040.1 (copper transporter 3)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-29
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 170 MMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAA 229
           MMHMTFFWGK T+VLF GWPG    MY + L ++F+++   E LSR   M + GP +   
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFM-KSGPASLGG 88

Query: 230 GIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQ 289
           G++QTAV+ VR  ++Y+VMLA+MSFNGGVF+AA+AG   GF+IFGSR  + T+S  + +
Sbjct: 89  GLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Carg12398 vs. TAIR10
Match: AT2G37925.1 (copper transporter 4)

HSP 1 Score: 115.2 bits (287), Expect = 7.1e-26
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 169 TMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRW--RLMTEMGPRN 228
           +++H TF+WG N QVLFSGWPG+  GMYALALI VF LA   EWL+R       + G   
Sbjct: 28  SLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADK 87

Query: 229 FAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKN 281
            A    +TA++ V+ G +Y+V+LA++SFNGGVF+AAI GH+ GF +F  R  +N
Sbjct: 88  LAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGRAFRN 141

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BLAST of Carg12398 vs. Swiss-Prot
Match: sp|Q8GWP3|COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.3e-36
Identity = 75/127 (59.06%), Postives = 97/127 (76.38%), Query Frame = 0


Query: 164 SSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMG 223
           ++S M MMHMTFFWGKNT++LFSGWPG   GMY L LI+VFLLAV VEWL+   ++   G
Sbjct: 18  TNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRG 77

Query: 224 PRNFAAGIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKN--T 283
             + A G+VQTAV+ ++ G+AY+VMLA+MSFNGGVFI AIAG + GF++FGS   KN   
Sbjct: 78  STSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGSTAFKNPSD 137

Query: 284 NSKPYDQ 289
           + KP++Q
Sbjct: 138 DEKPFEQ 144

[Close]

BLAST of Carg12398 vs. Swiss-Prot
Match: sp|Q9STG2|COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.2e-34
Identity = 75/129 (58.14%), Postives = 93/129 (72.09%), Query Frame = 0


Query: 172 HMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGI 231
           HMTFFWGKNT+VLFSGWPG  SGMYAL LI++FLLAV  EWL+   ++   G  N AAG+
Sbjct: 31  HMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGL 90

Query: 232 VQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTA 291
            QTAV+ ++ G++Y+VMLA+MSFN GVFI AIAG+  GF +FGS   K  +    DQ TA
Sbjct: 91  AQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGSTTFKKPSD---DQKTA 150

Query: 292 DL--PSGVC 299
           +L  PS  C
Sbjct: 151 ELLPPSSGC 156

[Close]

BLAST of Carg12398 vs. Swiss-Prot
Match: sp|Q39065|COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 3.2e-31
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 0


Query: 176 FWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLM--TEMGPRNFAAGIVQ 235
           FWGKNT+VLFSGWPG  SGMYAL LI VF LAV  EWL+   L+  +     N AAG++Q
Sbjct: 47  FWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQ 106

Query: 236 TAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADL 295
           TAV+ +RIG+AY+VMLA+MSFN GVF+ A+AGH+ GF++FGS+  +NT+    D+ T  +
Sbjct: 107 TAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQTFRNTSD---DRKTNYV 166

Query: 296 PSGVC 299
           P   C
Sbjct: 167 PPSGC 168

[Close]

BLAST of Carg12398 vs. Swiss-Prot
Match: sp|Q9FGU8|COPT3_ARATH (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.3e-28
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 170 MMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAA 229
           MMHMTFFWGK T+VLF GWPG    MY + L ++F+++   E LSR   M + GP +   
Sbjct: 29  MMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFM-KSGPASLGG 88

Query: 230 GIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQ 289
           G++QTAV+ VR  ++Y+VMLA+MSFNGGVF+AA+AG   GF+IFGSR  + T+S  + +
Sbjct: 89  GLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTE 146

[Close]

BLAST of Carg12398 vs. Swiss-Prot
Match: sp|Q94EE4|COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.5e-28
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 161 GMPSSSGMTMMHMTFFWGKNTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWR--- 220
           GM +   M   HMTFFWGKN++VLF+ WPG + GMYALALI VF LAV VE+L   R   
Sbjct: 23  GMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADA 82

Query: 221 LMTEMGPRNFAA-GIVQTAVHGVRIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIF 274
            +  +  R  AA G+ + AVH VR+G+AY++MLALMSFNGGVF+ A+AGH+ GFL F
Sbjct: 83  CLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF 139

[Close]

BLAST of Carg12398 vs. TrEMBL
Match: tr|A0A0A0LY50|A0A0A0LY50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.5e-57
Identity = 114/169 (67.46%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 130 VFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWP 189
           + P HDGMH D                MH+H M SS+    MHMTFFWGKNTQVLFSGWP
Sbjct: 29  LLPTHDGMHMDPPPPPIAPTSRGSGDDMHTHDMMSSA----MHMTFFWGKNTQVLFSGWP 88

Query: 190 GNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVML 249
           G++SGMYA+AL+ VFLLAV+VEWLS WR+MTE+GPRN AAGIVQTAVHG+R+GIAY+VML
Sbjct: 89  GDRSGMYAVALVFVFLLAVAVEWLSCWRMMTEVGPRNVAAGIVQTAVHGIRMGIAYLVML 148

Query: 250 ALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           ALMSFNGGVFI A+AGH  GFL+FGSRV K   S  YDQ T DLPS VC
Sbjct: 149 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGTVDLPSRVC 193

[Close]

BLAST of Carg12398 vs. TrEMBL
Match: tr|A0A1S3C5H1|A0A1S3C5H1_CUCME (copper transporter 2-like OS=Cucumis melo OX=3656 GN=LOC103497119 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.5e-57
Identity = 113/169 (66.86%), Postives = 129/169 (76.33%), Query Frame = 0


Query: 130 VFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNTQVLFSGWP 189
           +FP HDGMH D                +H+H M S +    MHMTFFWGKNTQVLFSGWP
Sbjct: 28  LFPTHDGMHMDSPPPPMSPTSRGSGDDLHTHDMMSPA----MHMTFFWGKNTQVLFSGWP 87

Query: 190 GNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRIGIAYMVML 249
           G++SGMYA+AL+ VFLLAV+VEWLS WR+MTE GPRN AAGIVQTAVHG+R+GIAY+VML
Sbjct: 88  GDRSGMYAVALVFVFLLAVAVEWLSCWRVMTEAGPRNVAAGIVQTAVHGIRMGIAYLVML 147

Query: 250 ALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGVC 299
           ALMSFNGGVFI A+AGH  GFL+FGSRV K   S  YDQ +ADLPS VC
Sbjct: 148 ALMSFNGGVFIVAVAGHMVGFLVFGSRVVKKEKSSAYDQGSADLPSRVC 192

[Close]

BLAST of Carg12398 vs. TrEMBL
Match: tr|A0A2H5ND54|A0A2H5ND54_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033100 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 128/287 (44.60%), Postives = 162/287 (56.45%), Query Frame = 0


Query: 35  MHMTFFWGTNAEILFRNWPGDRS---------------------------------AAGL 94
           MHMTFFWG NA +LF+ WPG  +                                 AAG+
Sbjct: 153 MHMTFFWGKNALVLFKGWPGTSTGMYALALVFVFAMGILVEWLSHSRLIKTGTGNVAAGI 212

Query: 95  IRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDL 154
           I+T MHT+RVGLA LVMLA+MSFNVGVFL A+ GH LGF  FGSR F  S A   K++DL
Sbjct: 213 IQTFMHTIRVGLANLVMLALMSFNVGVFLAAVAGHSLGFLLFGSRVFHKS-APPPKTNDL 272

Query: 155 PPLTKAHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNT 214
            P+            M+                  MH H          MHMTF+WG   
Sbjct: 273 SPM-----------NMNDSHMLDPPPTKNGTGEMMMHLH------KKMKMHMTFYWGNEA 332

Query: 215 QVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRI 274
           +VLFSGWPG ++GMYALALI VF L V  EWL+  RL+ E G  N AA I++T +H +R+
Sbjct: 333 EVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKE-GTTNVAARIIRTILHAIRV 392

Query: 275 GIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQ 289
            + Y++ML+LMSFN G+F+AA+AG + GFL+FGS V   T   PY++
Sbjct: 393 SLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTEFPPYEK 420

[Close]

BLAST of Carg12398 vs. TrEMBL
Match: tr|A0A2H5NCP7|A0A2H5NCP7_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033100 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.5e-54
Identity = 128/287 (44.60%), Postives = 162/287 (56.45%), Query Frame = 0


Query: 35  MHMTFFWGTNAEILFRNWPGDRS---------------------------------AAGL 94
           MHMTFFWG NA +LF+ WPG  +                                 AAG+
Sbjct: 269 MHMTFFWGKNALVLFKGWPGTSTGMYALALVFVFAMGILVEWLSHSRLIKTGTGNVAAGI 328

Query: 95  IRTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDL 154
           I+T MHT+RVGLA LVMLA+MSFNVGVFL A+ GH LGF  FGSR F  S A   K++DL
Sbjct: 329 IQTFMHTIRVGLANLVMLALMSFNVGVFLAAVAGHSLGFLLFGSRVFHKS-APPPKTNDL 388

Query: 155 PPLTKAHDVFPNHDGMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGKNT 214
            P+            M+                  MH H          MHMTF+WG   
Sbjct: 389 SPM-----------NMNDSHMLDPPPTKNGTGEMMMHLH------KKMKMHMTFYWGNEA 448

Query: 215 QVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGVRI 274
           +VLFSGWPG ++GMYALALI VF L V  EWL+  RL+ E G  N AA I++T +H +R+
Sbjct: 449 EVLFSGWPGKRAGMYALALIFVFTLGVIAEWLTHSRLIKE-GTTNVAARIIRTILHAIRV 508

Query: 275 GIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQ 289
            + Y++ML+LMSFN G+F+AA+AG + GFL+FGS V   T   PY++
Sbjct: 509 SLGYLLMLSLMSFNAGIFLAAVAGQALGFLLFGSMVFDKTEFPPYEK 536

[Close]

BLAST of Carg12398 vs. TrEMBL
Match: tr|A0A2H5PBQ9|A0A2H5PBQ9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_121900 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 122/298 (40.94%), Postives = 155/298 (52.01%), Query Frame = 0


Query: 36  HMTFFWGTNAEILFRNWPG---------------------------------DRSAAGLI 95
           HMTFFWG N ++LF  WPG                                  R AAGL 
Sbjct: 30  HMTFFWGHNTQVLFPGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVKPGASRVAAGLF 89

Query: 96  RTLMHTVRVGLAYLVMLAVMSFNVGVFLVAIGGHCLGFFFFGSRFFKNSGAASGKSSDLP 155
           +T +H VRVGLAY+V+LAVMSFN G+F+ A+ GH +G+  FGSR  K      GK     
Sbjct: 90  KTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSRVEK------GK----- 149

Query: 156 PLTKAHDVFPNHD---GMHSDXXXXXXXXXXXXXXXXMHSHGMPSSSGMTMMHMTFFWGK 215
                  +F +HD   GM+                  M+S  M    GM MMHMTF+WGK
Sbjct: 150 -------MFYDHDHDAGMY-------MPPGSSMPDGSMNSTSM--DMGM-MMHMTFYWGK 209

Query: 216 NTQVLFSGWPGNQSGMYALALILVFLLAVSVEWLSRWRLMTEMGPRNFAAGIVQTAVHGV 275
           +  VLFSGWP    GMY LALI VFLL  +VE LS    +  +G  + AA ++Q  V+ V
Sbjct: 210 DVLVLFSGWPERSLGMYILALIFVFLLGFAVEVLSISPRL--VGSNSMAALLIQACVYVV 269

Query: 276 RIGIAYMVMLALMSFNGGVFIAAIAGHSFGFLIFGSRVTKNTNSKPYDQSTADLPSGV 298
           R+ +AYMVML++MSFN GVFI A+AGH  GFL+  +R     N       +A + S V
Sbjct: 270 RMALAYMVMLSVMSFNLGVFIVAVAGHGAGFLLVKARALAAANRADSAVPSAGISSKV 297

The following BLAST results are available for this feature:

BLAST of Carg12398 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998908.1	5.4e-80	97.67	copper transporter 6-like [Cucurbita maxima]	[more]
XP_023525857.1	2.1e-79	97.67	copper transporter 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948632.1	6.0e-79	95.95	copper transporter 6-like [Cucurbita moschata]	[more]
XP_021278651.1	2.1e-60	46.98	copper transporter 1-like [Herrania umbratica]	[more]
KGN65762.1	3.8e-57	67.46	hypothetical protein Csa_1G526820 [Cucumis sativus]	[more]

BLAST of Carg12398 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26975.1	4.0e-37	59.06	Ctr copper transporter family	[more]
AT3G46900.1	2.9e-35	58.14	copper transporter 2	[more]
AT5G59030.1	1.8e-32	56.00	copper transporter 1	[more]
AT5G59040.1	2.4e-29	52.10	copper transporter 3	[more]
AT2G37925.1	7.1e-26	50.88	copper transporter 4	[more]

BLAST of Carg12398 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWP3\|COPT6_ARATH	7.3e-36	59.06	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
sp\|Q9STG2\|COPT2_ARATH	5.2e-34	58.14	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
sp\|Q39065\|COPT1_ARATH	3.2e-31	56.00	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
sp\|Q9FGU8\|COPT3_ARATH	4.3e-28	52.10	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]
sp\|Q94EE4\|COPT1_ORYSJ	9.5e-28	57.26	Copper transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT1 PE=2 SV=1	[more]

BLAST of Carg12398 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LY50\|A0A0A0LY50_CUCSA	2.5e-57	67.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G526820 PE=4 SV=1	[more]
tr\|A0A1S3C5H1\|A0A1S3C5H1_CUCME	9.5e-57	66.86	copper transporter 2-like OS=Cucumis melo OX=3656 GN=LOC103497119 PE=4 SV=1	[more]
tr\|A0A2H5ND54\|A0A2H5ND54_CITUN	1.5e-54	44.60	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033100 PE=4 SV=1	[more]
tr\|A0A2H5NCP7\|A0A2H5NCP7_CITUN	1.5e-54	44.60	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_033100 PE=4 SV=1	[more]
tr\|A0A2H5PBQ9\|A0A2H5PBQ9_CITUN	1.8e-39	40.94	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_121900 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12398-RA	Carg12398-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 230..273 e-value: 3.2E-9 score: 37.4 coord: 61..103 e-value: 1.1E-9 score: 38.9 coord: 173..220 e-value: 2.4E-7 score: 31.4
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 141..298 coord: 57..124 coord: 9..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..158
None	No IPR available	PANTHER	PTHR12483:SF47	COPPER TRANSPORTER 1-RELATED	coord: 141..298
None	No IPR available	PANTHER	PTHR12483:SF47	COPPER TRANSPORTER 1-RELATED	coord: 57..124 coord: 9..57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12398	Cla017944	Watermelon (97103) v1	carwmB0438
Carg12398	Cla008202	Watermelon (97103) v1	carwmB0440
Carg12398	Csa1G526820	Cucumber (Chinese Long) v2	carcuB0471
Carg12398	Csa3G733240	Cucumber (Chinese Long) v2	carcuB0473
Carg12398	MELO3C009211	Melon (DHL92) v3.5.1	carmeB0450
Carg12398	MELO3C020592	Melon (DHL92) v3.5.1	carmeB0449
Carg12398	ClCG10G021610	Watermelon (Charleston Gray)	carwcgB0431
Carg12398	ClCG03G001130	Watermelon (Charleston Gray)	carwcgB0436
Carg12398	CSPI03G31810	Wild cucumber (PI 183967)	carcpiB0478
Carg12398	CSPI01G23460	Wild cucumber (PI 183967)	carcpiB0476
Carg12398	Cucsa.175910	Cucumber (Gy14) v1	carcgyB0510
Carg12398	Cucsa.146630	Cucumber (Gy14) v1	carcgyB0509
Carg12398	CmaCh01G006310	Cucurbita maxima (Rimu)	carcmaB0613
Carg12398	CmoCh13G000930	Cucurbita moschata (Rifu)	carcmoB0594
Carg12398	CmoCh01G006610	Cucurbita moschata (Rifu)	carcmoB0596
Carg12398	Lsi02G013230	Bottle gourd (USVL1VR-Ls)	carlsiB403
Carg12398	Cp4.1LG20g08270	Cucurbita pepo (Zucchini)	carcpeB0620
Carg12398	Cp4.1LG02g11570	Cucurbita pepo (Zucchini)	carcpeB0623
Carg12398	CsGy3G029640	Cucumber (Gy14) v2	carcgybB0450
Carg12398	CsGy1G022930	Cucumber (Gy14) v2	carcgybB0448
Carg12398	MELO3C020592.2	Melon (DHL92) v3.6.1	carmedB0451
Carg12398	MELO3C009211.2	Melon (DHL92) v3.6.1	carmedB0453
Carg12398	CsaV3_1G035760	Cucumber (Chinese Long) v3	carcucB0473
Carg12398	CsaV3_1G034650	Cucumber (Chinese Long) v3	carcucB0472
Carg12398	CsaV3_3G034410	Cucumber (Chinese Long) v3	carcucB0475
Carg12398	Cla97C10G204870	Watermelon (97103) v2	carwmbB0463
Carg12398	Cla97C03G051980	Watermelon (97103) v2	carwmbB0467
Carg12398	Bhi08G000461	Wax gourd	carwgoB0534

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12398	Carg01074	Silver-seed gourd	carcarB192
Carg12398	Carg20628	Silver-seed gourd	carcarB408

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12398	Cucurbita maxima (Rimu)	carcmaB0610
Carg12398	Cucurbita maxima (Rimu)	carcmaB0612
Carg12398	Cucurbita moschata (Rifu)	carcmoB0595
Carg12398	Cucurbita pepo (Zucchini)	carcpeB0619
Carg12398	Bottle gourd (USVL1VR-Ls)	carlsiB405
Carg12398	Watermelon (97103) v1	carwmB0441
Carg12398	Wax gourd	carwgoB0535
Carg12398	Silver-seed gourd	carcarB449
Carg12398	Cucumber (Gy14) v2	carcgybB0452