Carg12087 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12087
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein DEHYDRATION-INDUCED 19 homolog 4-like
Location	Cucurbita_argyrosperma_scaffold_037 : 1112061 .. 1114522 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGTGAAGCTTATAGCTATGGATTCTCTGATTCTGCTGTTGCTGATGCTTTGAGGAACTCTCAGTTAAAATCCCAGTCGCGTTAGTCTTTTCTCGATCTTAATTTACTCATTTTCTGTGGTTTAGGTTTTGTTTTTGGGGGTTTTTGGTTTGAATGAATTCTGTTTGGTTTTGTAGATTTTTATTTTGATTACGAGGAAGTGGATGGGGATGATGATTTGAATTCGGAATATCCTTGCCCGTTTTGTCCTGAGGAATTTGATTTGGTTGAGTTATGCTGCCATATTGATGACGAACATCCCGTAGAAGCCAAGTTTGGAGTAAGAAAATCTCTTAACTTCTTCTATTTTTTAGTAAGAGATTAGAAATATTTCCCTTGATATGTGGTATCAACCAAAAACTTGCTTGCATTTTCTGACCCTCGAGATTTGGGTCAGTTCATAGTTCTTACAGAGTTCTTATTTTGATTGTCTTCTTTGAGTGAGTTTGAACTTCAAGTTCAAGGCATTGTCCTGTTGTTTGTTAACGTTTAGTGCTTTTGATCTTATTGTGCAAGTTTTTCATTTCAAGTTTTTGTTGGAACTTGTTTCATGACTATAAGAAGCCCCTTTCTGATCTATCCTCTTACTCGTTGTTATAGACTTTATCATCATTAACCCACCTACTAATATCAGATGTTGGTACTGCTCTGTTGCTTAATGTATTGTTCTATTGGACTTGACCTGGAAAATTAGATTGCTATGGTTGTCTGTAGCTCGGATAACGTGGTAACGTGGTGGTATTTTCCTTTAGATTTTATTTTTCCTCCCATGGATGTTATACTTGTCTGCTCGTCTTGCCTCCGCTCAAGAATGTTTGTGTATGATTATTATGTCGGTGTCAGCGTTTTAAAGATCTTTTTGGGGAGTAAATTTTTTATTAGGATCGCACAACAACGTACACACTCGATCTAGATGAACACGAAAAACAGGAAAGAAAAAAAGTAAGGAGGAATATTGGCTAAAGGATTTGTATTGATGACTTTAGGCATGTACTTGAAGTCATCAATCTAAACCTTTAGCCAATATTCCTCCTTGCATTTTCTCTCTCTCCTGTTCTTTGTGCTCATCTAGATCGAGTGTGAGCATTGTTGTGCGATCCTAACATTTTCTGCATGCTTTTATGATCTTTCTATACCATCTTTTGAAATTTGTTCGTCTTTTTTGTGGTTTTTTATGCATTTGGTTTCATGCATTTTCAGATATGTCCTATTTGTTCTACAAGCGTGGGAGAGAATATGGTTGGACATATAACGATGCAACATGGAGATATATTTAATATATCCTTTTCTTCATTGTTTCGATATAGTTAAGTTTCCCCAATTTTGTAAAGCTCTCAGATGTTTTTCCTTTGTATGTTGTTCGGGTTCTTGTTTATATCCGAATCCATACGTTCTTTTCCTTAACTTGAGATTACAGTCAACAAAGATTGAAATTTGATAAAGACGATTTCCCTCAAAGTCTTTCTTTCGAGAGGAAAGAGTTACTAGATGATCATGTAAGAACTCTTTCTGGGTTTTCTTCTCTGCATTCCACCTCCAAGATGGCACCTGATCCATTGCTGTCATTTTTATGCAATGCACCTGTCATCAATGAGTCTGAAACTGTTCGGCCCGGGCCTTCAGGTGTAGAAAAAATGGAGGAAAAAGATTTAGACGATACACTGTCGGAAAGGTAAGCACAGAAATATGCTTCTCGATGCCTCTTATATTAAAAGATGATGTGTTTGATCTGATTTGAAACTTACACACTTTGTACCTGCATCTGTTCATCATAATTATGATTTTTTCTGCTTCTTAGGCATGCATTTTGGTTTGTTATTTAAAATGTTTTTTTGTATAAGCTCGGAGATGTCCTGCTTCTCCTACGAGCTTAAATAACCCTGAGTTACTGTTGCGAGTGTCACAATATGTTTAAGGATATTATAAACTTACGCACTTCGTCGATCGTGCAGCTAATGACGAATAGTTCAAAGATATGTCAGGAGTTAGAGGCTTAAATATTTAGTTCCACTCGCTTTCTAAACTCATGGTTCGAGCTACGTTCCAGTTTTATTTTGGTTTCTATTTTCCTTTTAGGGTCATACAGGGTCATTGTAGCTTTGGAGTTATACTGTCATTGAACTGTAAAATGATCCTGTTTCAGTTTCATGCCTTTATATTCGAATCGAGTTGTTTGTGTTGGTCGAGTTATTTTTGCTCTCCTTACTGTCATTTCATTCGTAGCAACTCTTGTAACTTCTGTGATGGAGATGCCTCATATCCTAAAACTCATCCTCTCCAACCTAATGACGTTAAATATGCATATGTAGGGATGTCGGGTTACCTTCTCTACCAGACACGAACCAAGAAGAGAAGACTCGGAGATCGGACTTCGTACGGGGGCTAGTTTTCTCCGTCATCTTAGGCGACAATTTATAA

mRNA sequence

ATGGAAAGTGAAGCTTATAGCTATGGATTCTCTGATTCTGCTGTTGCTGATGCTTTGAGGAACTCTCAGTTAAAATCCCAGTCGCATTTTTATTTTGATTACGAGGAAGTGGATGGGGATGATGATTTGAATTCGGAATATCCTTGCCCGTTTTGTCCTGAGGAATTTGATTTGGTTGAGTTATGCTGCCATATTGATGACGAACATCCCGTAGAAGCCAATCAACAAAGATTGAAATTTGATAAAGACGATTTCCCTCAAAGTCTTTCTTTCGAGAGGAAAGAGTTACTAGATGATCATGTAAGAACTCTTTCTGGGTTTTCTTCTCTGCATTCCACCTCCAAGATGGCACCTGATCCATTGCTGTCATTTTTATGCAATGCACCTGTCATCAATGAGTCTGAAACTGTTCGGCCCGGGCCTTCAGGTGTAGAAAAAATGGAGGAAAAAGATTTAGACGATACACTGTCGGAAAGGGATGTCGGGTTACCTTCTCTACCAGACACGAACCAAGAAGAGAAGACTCGGAGATCGGACTTCGTACGGGGGCTAGTTTTCTCCGTCATCTTAGGCGACAATTTATAA

Coding sequence (CDS)

ATGGAAAGTGAAGCTTATAGCTATGGATTCTCTGATTCTGCTGTTGCTGATGCTTTGAGGAACTCTCAGTTAAAATCCCAGTCGCATTTTTATTTTGATTACGAGGAAGTGGATGGGGATGATGATTTGAATTCGGAATATCCTTGCCCGTTTTGTCCTGAGGAATTTGATTTGGTTGAGTTATGCTGCCATATTGATGACGAACATCCCGTAGAAGCCAATCAACAAAGATTGAAATTTGATAAAGACGATTTCCCTCAAAGTCTTTCTTTCGAGAGGAAAGAGTTACTAGATGATCATGTAAGAACTCTTTCTGGGTTTTCTTCTCTGCATTCCACCTCCAAGATGGCACCTGATCCATTGCTGTCATTTTTATGCAATGCACCTGTCATCAATGAGTCTGAAACTGTTCGGCCCGGGCCTTCAGGTGTAGAAAAAATGGAGGAAAAAGATTTAGACGATACACTGTCGGAAAGGGATGTCGGGTTACCTTCTCTACCAGACACGAACCAAGAAGAGAAGACTCGGAGATCGGACTTCGTACGGGGGCTAGTTTTCTCCGTCATCTTAGGCGACAATTTATAA

Protein sequence

MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVEANQQRLKFDKDDFPQSLSFERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKDLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL

Homology

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BLAST of Carg12087 vs. NCBI nr
Match: XP_023513520.1 (protein DEHYDRATION-INDUCED 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.4 bits (960), Expect = 2.3e-100
Identity = 190/223 (85.20%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE
Sbjct: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60

Query: 61  LCCHIDDEHPVEA-----------------------------NQQRLKFDKDDFPQSLSF 120
           LCCHIDDEHPVEA                             +QQRLKFDKDDFPQSLSF
Sbjct: 61  LCCHIDDEHPVEAKFGICPICSTSVGENMVGHITMQHGDIFNSQQRLKFDKDDFPQSLSF 120

Query: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180
           ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPS +EKMEEKD
Sbjct: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSSIEKMEEKD 180

Query: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFS+ILGDNL
Sbjct: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSIILGDNL 223

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BLAST of Carg12087 vs. NCBI nr
Match: XP_022959753.1 (protein DEHYDRATION-INDUCED 19-like [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 3.1e-100
Identity = 192/223 (86.10%), Postives = 193/223 (86.55%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE
Sbjct: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60

Query: 61  LCCHIDDEHPVEA-----------------------------NQQRLKFDKDDFPQSLSF 120
           LCCHIDDEHPVEA                             +QQRLKFDKDDFPQSLSF
Sbjct: 61  LCCHIDDEHPVEAKFGICPICSTSVGENMVGHITMQHGDIFNSQQRLKFDKDDFPQSLSF 120

Query: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180
           ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD
Sbjct: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180

Query: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVIL DNL
Sbjct: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILVDNL 223

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BLAST of Carg12087 vs. NCBI nr
Match: XP_023004648.1 (protein DEHYDRATION-INDUCED 19-like [Cucurbita maxima])

HSP 1 Score: 363.6 bits (932), Expect = 4.1e-97
Identity = 187/223 (83.86%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           MESEAYSYGFSDS+VADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE
Sbjct: 1   MESEAYSYGFSDSSVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60

Query: 61  LCCHIDDEHPVEA-----------------------------NQQRLKFDKDDFPQSLSF 120
           LCCHIDDEHPVEA                             +QQRLKFDKDDFPQSLSF
Sbjct: 61  LCCHIDDEHPVEAKFGICPICSTSVGENMVEHITMQHGDIFNSQQRLKFDKDDFPQSLSF 120

Query: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180
           ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVIN+SETVRP PS VEKMEEKD
Sbjct: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINDSETVRPRPSSVEKMEEKD 180

Query: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           LDDTLSERDV LPSLPDTNQEEKT RSDFVRGLVFSVILGDNL
Sbjct: 181 LDDTLSERDVRLPSLPDTNQEEKTWRSDFVRGLVFSVILGDNL 223

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BLAST of Carg12087 vs. NCBI nr
Match: XP_008451522.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo])

HSP 1 Score: 312.8 bits (800), Expect = 8.4e-82
Identity = 165/223 (73.99%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           M+SEAY+YG SD+A A   R+S  KSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE
Sbjct: 1   MDSEAYTYGLSDAAAA---RSS--KSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60

Query: 61  LCCHIDDEHPVEAN-----------------------------QQRLKFDKDDFPQSLSF 120
           LCCHIDDEHPVEAN                             QQRLKF KDDFPQSLSF
Sbjct: 61  LCCHIDDEHPVEANFGICPICSTSVGENMVGHITMQHGDVFNSQQRLKFHKDDFPQSLSF 120

Query: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180
           ERKEL DDHVR LSGFSSLHSTSKMAPDPLLSFLCNAPVINES+TV+P PS  EKMEEK 
Sbjct: 121 ERKELQDDHVRILSGFSSLHSTSKMAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKV 180

Query: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           +DDTLSERDV L S+PDTNQEEKTRR DF+R LVFSV+LGD+L
Sbjct: 181 VDDTLSERDVQLSSIPDTNQEEKTRRCDFIRDLVFSVMLGDDL 218

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BLAST of Carg12087 vs. NCBI nr
Match: XP_022143934.1 (protein DEHYDRATION-INDUCED 19-like [Momordica charantia])

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 155/224 (69.20%), Postives = 172/224 (76.79%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           MESEAYSYG SD+ VA A R+SQL+S SHFYFDYEEVDGDD LN+EYPCPFCP+EFDLVE
Sbjct: 1   MESEAYSYGLSDATVA-ASRSSQLRSHSHFYFDYEEVDGDDVLNAEYPCPFCPDEFDLVE 60

Query: 61  LCCHIDDEHPVEA-----------------------------NQQRLKFDKDDFPQSLSF 120
           LC HID+EHPVEA                             +QQRLKF KDDFPQSLSF
Sbjct: 61  LCYHIDEEHPVEAKYGICPICSLSAGASMVGHLTMHHGDIFNSQQRLKFHKDDFPQSLSF 120

Query: 121 ERKELLDDHVRT-LSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEK 180
           ERKEL D HV + LSGFSSL+STSKMAPDPLLSFLCNAP+INES+T +P PS  E +EEK
Sbjct: 121 ERKELHDYHVTSILSGFSSLNSTSKMAPDPLLSFLCNAPIINESKTAQPMPSSKENLEEK 180

Query: 181 DLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           +LDDT SERDV L S+PDT +EEKTRR DFVRGLVFS ILGD+L
Sbjct: 181 ELDDTFSERDVQLSSIPDTKREEKTRRCDFVRGLVFSAILGDSL 223

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BLAST of Carg12087 vs. TAIR10
Match: AT3G06760.2 (Drought-responsive family protein)

HSP 1 Score: 95.9 bits (237), Expect = 2.9e-20
Identity = 67/222 (30.18%), Postives = 108/222 (48.65%), Query Frame = 0


Query: 13  SAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVE 72
           S+ + + R  Q +S  +    YE+++G+DDL +E+ CPFC E+FD+V LCCHID+EHPVE
Sbjct: 13  SSSSSSSRRCQSRSDLYLGGGYEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVE 72

Query: 73  ANQ---------------------------------------QRLKFDKDDFPQSLSFER 132
           A                                         +  +  +  +  +    +
Sbjct: 73  AKNGVDQFFALVVIQCCNFWFIPCESNLGIFRLFGRSVLYALRGRRLRRGGYSSTYLALK 132

Query: 133 KELLDDHVRT-LSGFSSLHSTSKMAPDPLL-SFLCNAPVINESETVRPGPSGVEKMEEKD 192
           KEL + ++++ L G SS  S++ +  DPLL SF+ N+P +N+S      P  V     K 
Sbjct: 133 KELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKV 192

Query: 193 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDN 194
                 +RD+    L   +Q EK ++S+FVRGL+ S +L D+
Sbjct: 193 SIKESLKRDIQEAPLSGEDQ-EKAKKSEFVRGLLLSTMLEDD 233

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BLAST of Carg12087 vs. TAIR10
Match: AT1G56280.1 (drought-induced 19)

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-20
Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 0


Query: 24  LKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVEANQ-------- 83
           L+S+S     +EE+DGDDD   E+ CPFC E +D++ LCCHIDDEH +E+          
Sbjct: 12  LRSRSEMLMGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSL 71

Query: 84  ---------------QRLKFDKDDFPQSLSFERKELLDDHVRTLSGFSSLHST--SKMAP 143
                          ++ K  K     +LS  RKEL +  ++ L GF+S + +  S + P
Sbjct: 72  KVGVDIVAHKRFTMGRKRKSRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSVASSVTP 131

Query: 144 DPLLSFLCNAPVINESETVRPGPSGVEKM-EEKDLDDTLSERDVGLPSLPDTNQEEKTRR 193
           DPLLS    +P  ++S    P P   + + E+K ++    +R V +  +   ++EE+  +
Sbjct: 132 DPLLSSFI-SPTRSQSS---PAPRQTKNVSEDKQIE---RKRQVFISPVSLKDREERRHK 191

[Close]

BLAST of Carg12087 vs. TAIR10
Match: AT4G02200.3 (Drought-responsive family protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-19
Identity = 67/190 (35.26%), Postives = 92/190 (48.42%), Query Frame = 0


Query: 36  EVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVEANQQRL------KFDKDDFPQSL 95
           E + DD++  +YPCPFC +++DLVELC HID+EH ++AN   L      KF         
Sbjct: 32  EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGFLHEAVSCKFRLFIICPVC 91

Query: 96  SFERKELLDDHVRT--------------LSGFS---------------SLHSTSKMAPDP 155
           S   K  + DH+ T               S FS               S + TSK   DP
Sbjct: 92  SRRVKMHMVDHITTQHRDVFKRLYKDESYSAFSPGTRKYLQSLIDEPLSTNHTSKSVLDP 151

Query: 156 LLSFLCNAPVINESETVRPGPSGVEKMEEKDLDDTLSERDVGLPS-LPDTNQEEKTRRSD 190
           LLSF+ N P   +S+ V+P  S    ME+  L    +E+D   PS L DT   EK ++ +
Sbjct: 152 LLSFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKRE 211

[Close]

BLAST of Carg12087 vs. TAIR10
Match: AT5G26990.1 (Drought-responsive family protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-19
Identity = 67/228 (29.39%), Postives = 112/228 (49.12%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLK--SQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDL 60
           M+S+++S       +A A R  QL   S+S  +  +EE++G+DD   EY CPFC + FD+
Sbjct: 1   MDSDSWS-----DRLASASRRYQLDFLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDI 60

Query: 61  VELCCHIDDEHPVEANQ-----------------------------QRLKFDKDDFPQSL 120
           V LCCHID++HP++A                               ++ K  +      L
Sbjct: 61  VSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSML 120

Query: 121 SFERKELLDDHVRTLSGFSS---LHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEK 180
           S  ++E  D + ++L   +S     S++ +A DPLLS    +P+ ++             
Sbjct: 121 SILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFI-SPMADDFFISESSLCADTS 180

Query: 181 MEEKDLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
             +K L+ +L ER+V   SL   +  EK ++S+FV+G++ S+IL D L
Sbjct: 181 SAKKTLNQSLPERNVEKQSLSAEDHREKLKQSEFVQGILSSMILEDGL 222

[Close]

BLAST of Carg12087 vs. TAIR10
Match: AT3G05700.1 (Drought-responsive family protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17
Identity = 68/229 (29.69%), Postives = 108/229 (47.16%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQL--KSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDL 60
           M+S+++S       +A A R  QL   S+S  +  +EE+DG+++   E+ CPFC + FD+
Sbjct: 1   MDSDSWS-----DRLASATRRYQLAFPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDI 60

Query: 61  VELCCHIDDEHPVEAN-----------------------------QQRLKFDKDDFPQSL 120
           V LCCHID++HP+EA                               ++ K  +     +L
Sbjct: 61  VSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTL 120

Query: 121 SFERKELLDDHVRTLSGFSS----LHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVE 180
           S  R+E  D + ++L G SS          +A DPLLS    +P+ +   T     S   
Sbjct: 121 SILRREFPDGNFQSLFGGSSXXXXXXXXXXVAADPLLSSFI-SPIADGFFTTESCISAET 180

Query: 181 KMEEKDLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
              +K     L E++    SL   + ++K +RS+FVR L+ S IL D+L
Sbjct: 181 GPVKKTTIQCLPEQNAKKTSLSAEDHKQKLKRSEFVRELLSSTILDDSL 223

[Close]

BLAST of Carg12087 vs. Swiss-Prot
Match: sp|Q8VXU6|DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 69/212 (32.55%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 13  SAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVE 72
           S+ + + R  Q +S  +    YE+++G+DDL +E+ CPFC E+FD+V LCCHID+EHPVE
Sbjct: 13  SSSSSSSRRCQSRSDLYLGGGYEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVE 72

Query: 73  AN-----------------------------QQRLKFDKDDFPQSLSFERKELLDDHVRT 132
           A                              Q+R +  +  +  +    +KEL + ++++
Sbjct: 73  AKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRRRLRRGGYSSTYLALKKELREANLQS 132

Query: 133 -LSGFSSLHSTSKMAPDPLL-SFLCNAPVINESETVRPGPSGVEKMEEKDLDDTLSERDV 192
            L G SS  S++ +  DPLL SF+ N+P +N+S      P  V     K       +RD+
Sbjct: 133 LLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDI 192

Query: 193 GLPSLPDTNQEEKTRRSDFVRGLVFSVILGDN 194
               L   +Q EK ++S+FVRGL+ S +L D+
Sbjct: 193 QEAPLSGEDQ-EKAKKSEFVRGLLLSTMLEDD 223

[Close]

BLAST of Carg12087 vs. Swiss-Prot
Match: sp|Q39083|DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana OX=3702 GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-18
Identity = 63/201 (31.34%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 24  LKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVEAN--------- 83
           L+S+S     +EE+DGDDD   E+ CPFC E +D++ LCCHIDDEH +E+          
Sbjct: 12  LRSRSEMLMGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSL 71

Query: 84  --------------------QQRLKFDKDDFPQSLSFERKELLDDHVRTLSGFSSLHST- 143
                               Q++ K  K     +LS  RKEL +  ++ L GF+S + + 
Sbjct: 72  KVGVDIVAHITLHHGSLFKLQRKRKSRKSGTNSTLSLLRKELREGDLQRLLGFTSRNGSV 131

Query: 144 -SKMAPDPLLSFLCNAPVINESETVRPGPSGVEKM-EEKDLDDTLSERDVGLPSLPDTNQ 193
            S + PDPLLS    +P  ++S    P P   + + E+K ++    +R V +  +   ++
Sbjct: 132 ASSVTPDPLLSSFI-SPTRSQSS---PAPRQTKNVSEDKQIE---RKRQVFISPVSLKDR 191

[Close]

BLAST of Carg12087 vs. Swiss-Prot
Match: sp|O04259|DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=DI19-5 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-18
Identity = 65/178 (36.52%), Postives = 93/178 (52.25%), Query Frame = 0


Query: 36  EVDGDDDLNSEYPCPFCPEEFDLVELCCHIDDEHPVEAN-------QQRLKFDKDDFPQS 95
           E + DD++  +YPCPFC +++DLVELC HID+EH ++AN        +R+K    D   +
Sbjct: 32  EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91

Query: 96  LSFE-RKELLDDHVRTLSGFS---------------SLHSTSKMAPDPLLSFLCNAPVIN 155
              +  K L  D   + S FS               S + TSK   DPLLSF+ N P   
Sbjct: 92  QHRDVFKRLYKD--ESYSAFSPGTRKYLQSLIDEPLSTNHTSKSVLDPLLSFIYNPPSPK 151

Query: 156 ESETVRPGPSGVEKMEEKDLDDTLSERDVGLPS-LPDTNQEEKTRRSDFVRGLVFSVI 190
           +S+ V+P  S    ME+  L    +E+D   PS L DT   EK ++ +FV+GL+ S I
Sbjct: 152 KSKLVQPDSSSEASMEDNSLIRDSTEKDWESPSPLSDTELLEKAKKREFVQGLISSAI 207

[Close]

BLAST of Carg12087 vs. Swiss-Prot
Match: sp|Q6NM26|DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.6e-18
Identity = 67/228 (29.39%), Postives = 112/228 (49.12%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLK--SQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDL 60
           M+S+++S       +A A R  QL   S+S  +  +EE++G+DD   EY CPFC + FD+
Sbjct: 1   MDSDSWS-----DRLASASRRYQLDFLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDI 60

Query: 61  VELCCHIDDEHPVEANQ-----------------------------QRLKFDKDDFPQSL 120
           V LCCHID++HP++A                               ++ K  +      L
Sbjct: 61  VSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSML 120

Query: 121 SFERKELLDDHVRTLSGFSS---LHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEK 180
           S  ++E  D + ++L   +S     S++ +A DPLLS    +P+ ++             
Sbjct: 121 SILKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFI-SPMADDFFISESSLCADTS 180

Query: 181 MEEKDLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
             +K L+ +L ER+V   SL   +  EK ++S+FV+G++ S+IL D L
Sbjct: 181 SAKKTLNQSLPERNVEKQSLSAEDHREKLKQSEFVQGILSSMILEDGL 222

[Close]

BLAST of Carg12087 vs. Swiss-Prot
Match: sp|Q5W794|DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 65/210 (30.95%), Postives = 99/210 (47.14%), Query Frame = 0


Query: 24  LKSQSHFYFDYEEVD--GDDDLNSE-----YPCPFCPEEFDLVELCCHIDDEHPVEA--- 83
           L+++   Y  +++ D  G +++ +      Y CPFC E+FD V  CCH+DDEH VEA   
Sbjct: 24  LQARYDLYMGFDDADAAGVEEVEARGGGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSG 83

Query: 84  ----------------------------NQQRLKFDKDDFPQSLSFERKELLDDHVRT-L 143
                                        ++R++         LS  RK+L D  +++ L
Sbjct: 84  VCPICATRVGVDLIGHLTMQHGSYFKMQRRRRVRKISSGSHSLLSLLRKDLRDGSLQSFL 143

Query: 144 SGFSSLHSTSKMAPDPLL-SFLCNAPVINESETVRPGPSGVEKMEEKDLDDTLSERDVGL 194
            G S + +    APDP L S +C+ PV   S+ +    S    +  K  DD  +ER    
Sbjct: 144 GGSSYVSNPPAAAPDPFLSSLICSLPVAEPSKDLHSDSSDNNFLLNKFPDDKTAER--AE 203

[Close]

BLAST of Carg12087 vs. TrEMBL
Match: tr|A0A1S3BR26|A0A1S3BR26_CUCME (protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103492783 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.5e-82
Identity = 165/223 (73.99%), Postives = 176/223 (78.92%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           M+SEAY+YG SD+A A   R+S  KSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE
Sbjct: 1   MDSEAYTYGLSDAAAA---RSS--KSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60

Query: 61  LCCHIDDEHPVEAN-----------------------------QQRLKFDKDDFPQSLSF 120
           LCCHIDDEHPVEAN                             QQRLKF KDDFPQSLSF
Sbjct: 61  LCCHIDDEHPVEANFGICPICSTSVGENMVGHITMQHGDVFNSQQRLKFHKDDFPQSLSF 120

Query: 121 ERKELLDDHVRTLSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKD 180
           ERKEL DDHVR LSGFSSLHSTSKMAPDPLLSFLCNAPVINES+TV+P PS  EKMEEK 
Sbjct: 121 ERKELQDDHVRILSGFSSLHSTSKMAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKV 180

Query: 181 LDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           +DDTLSERDV L S+PDTNQEEKTRR DF+R LVFSV+LGD+L
Sbjct: 181 VDDTLSERDVQLSSIPDTNQEEKTRRCDFIRDLVFSVMLGDDL 218

[Close]

BLAST of Carg12087 vs. TrEMBL
Match: tr|A0A2I4EZH7|A0A2I4EZH7_9ROSI (protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108994150 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35
Identity = 95/224 (42.41%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           ME +A+S+GFS S+ A        +S +    D+EEV+ DDDL +EYPCPFCPE+FDLV 
Sbjct: 1   MEDDAWSFGFSTSSRA-------YRSTTDLCIDWEEVEADDDLKAEYPCPFCPEDFDLVG 60

Query: 61  LCCHIDDEHPVEANQ-----------------------------QRLKFDKDDFPQSLSF 120
           LCCHID+EHP+EAN                               +LK  K +   + S 
Sbjct: 61  LCCHIDEEHPIEANYGVCPVCATKVGMNMVGHITTQHGNFFKNWHKLKLCKGESYSTFSS 120

Query: 121 ERKELLDDHVRT-LSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEK 180
            RKE  + H ++ L+G S + STSKMAPD LLSFL N P   +SE+V+P  S    ME++
Sbjct: 121 SRKEFQNGHFQSLLAGSSPVVSTSKMAPDSLLSFLYNGPAAVKSESVQPDSSTEVSMEDE 180

Query: 181 DLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           + D++   R+  +P L D  +EEK+RR +FVRGL  S I  D+L
Sbjct: 181 NSDESRLVRNFQVP-LSDKEKEEKSRRCEFVRGLFLSTIFDDSL 216

[Close]

BLAST of Carg12087 vs. TrEMBL
Match: tr|A0A2I4EZH1|A0A2I4EZH1_9ROSI (protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108994150 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 8.7e-35
Identity = 94/224 (41.96%), Postives = 128/224 (57.14%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           ME +A+S+GFS S        S+    ++   D+EEV+ DDDL +EYPCPFCPE+FDLV 
Sbjct: 1   MEDDAWSFGFSTS--------SRAYRSTNLCIDWEEVEADDDLKAEYPCPFCPEDFDLVG 60

Query: 61  LCCHIDDEHPVEANQ-----------------------------QRLKFDKDDFPQSLSF 120
           LCCHID+EHP+EAN                               +LK  K +   + S 
Sbjct: 61  LCCHIDEEHPIEANYGVCPVCATKVGMNMVGHITTQHGNFFKNWHKLKLCKGESYSTFSS 120

Query: 121 ERKELLDDHVRT-LSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEK 180
            RKE  + H ++ L+G S + STSKMAPD LLSFL N P   +SE+V+P  S    ME++
Sbjct: 121 SRKEFQNGHFQSLLAGSSPVVSTSKMAPDSLLSFLYNGPAAVKSESVQPDSSTEVSMEDE 180

Query: 181 DLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           + D++   R+  +P L D  +EEK+RR +FVRGL  S I  D+L
Sbjct: 181 NSDESRLVRNFQVP-LSDKEKEEKSRRCEFVRGLFLSTIFDDSL 215

[Close]

BLAST of Carg12087 vs. TrEMBL
Match: tr|A0A2I4EZH9|A0A2I4EZH9_9ROSI (protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X3 OS=Juglans regia OX=51240 GN=LOC108994150 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 95/224 (42.41%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 1   MESEAYSYGFSDSAVADALRNSQLKSQSHFYFDYEEVDGDDDLNSEYPCPFCPEEFDLVE 60
           ME +A+S+GFS S+ A        +S +    D+EEV+ DDDL +EYPCPFCPE+FDLV 
Sbjct: 1   MEDDAWSFGFSTSSRA-------YRSTTDLCIDWEEVEADDDLKAEYPCPFCPEDFDLVG 60

Query: 61  LCCHIDDEHPVEANQ-----------------------------QRLKFDKDDFPQSLSF 120
           LCCHID+EHP+EAN                               +LK  K +   + S 
Sbjct: 61  LCCHIDEEHPIEANYGVCPVCATKVGMNMVGHITTQHGNFFKNWHKLKLCKGESYSTFSS 120

Query: 121 ERKELLDDHVRT-LSGFSSLHSTSKMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEK 180
            RKE  + H ++ L+G S + STSKMAPD LLSFL N P   +SE+V+P  S    ME++
Sbjct: 121 SRKEFQNGHFQSLLAGSSPVVSTSKMAPDSLLSFLYNGPAAVKSESVQPDSSTEVSMEDE 180

Query: 181 DLDDTLSERDVGLPSLPDTNQEEKTRRSDFVRGLVFSVILGDNL 195
           + D++   R+  +P L D  +EEK+RR +FVRGL  S I  D+L
Sbjct: 181 NSDES---RNFQVP-LSDKEKEEKSRRCEFVRGLFLSTIFDDSL 213

[Close]

BLAST of Carg12087 vs. TrEMBL
Match: tr|W9SA28|W9SA28_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007471 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 92/200 (46.00%), Postives = 124/200 (62.00%), Query Frame = 0


Query: 1   MESEAYSY-GFSDSAVADALRNSQ--LKSQSHFYFDYEEVDGDD-DLNSEYPCPFCPEEF 60
           ME + +S+ G S +++     + Q  LKS S FY ++E+ DGDD DL  ++PCPFC E+F
Sbjct: 1   MEHDGWSFAGLSAASLRSTYHHHQSTLKSHSDFYIEFEDFDGDDEDLRLDFPCPFCSEDF 60

Query: 61  DLVELCCHIDDEHPVEANQ-QRLKFDKDDFPQSLSFERKELLDDHVRTLSGFS-SLHSTS 120
           DLV LCCH+D+EHP EA     LK  K +   +LSF RKEL D+H R++ G S S  STS
Sbjct: 61  DLVGLCCHLDEEHPSEAKSGHNLKPHKGEC-LALSFSRKELQDEHFRSIFGGSPSPVSTS 120

Query: 121 KMAPDPLLSFLCNAPVINESETVRPGPSGVEKMEEKDLDDTLSERDVGLPSLPDTNQEEK 180
           KMA DPLLSFL  AP   +S+ ++   S    +EEK  ++   E +   P L D +QEEK
Sbjct: 121 KMALDPLLSFLHKAPTSEKSDDLQSISSAEVVLEEKTSEEASLEGNSRPPPLSDKDQEEK 180

Query: 181 TRRSDFVRGLVFSVILGDNL 195
             R  FV+GL++S  L D L
Sbjct: 181 AERCKFVQGLLWSTFLDDGL 199

The following BLAST results are available for this feature:

BLAST of Carg12087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513520.1	2.3e-100	85.20	protein DEHYDRATION-INDUCED 19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959753.1	3.1e-100	86.10	protein DEHYDRATION-INDUCED 19-like [Cucurbita moschata]	[more]
XP_023004648.1	4.1e-97	83.86	protein DEHYDRATION-INDUCED 19-like [Cucurbita maxima]	[more]
XP_008451522.1	8.4e-82	73.99	PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo]	[more]
XP_022143934.1	2.0e-75	69.20	protein DEHYDRATION-INDUCED 19-like [Momordica charantia]	[more]

BLAST of Carg12087 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06760.2	2.9e-20	30.18	Drought-responsive family protein	[more]
AT1G56280.1	8.5e-20	31.79	drought-induced 19	[more]
AT4G02200.3	4.2e-19	35.26	Drought-responsive family protein	[more]
AT5G26990.1	4.2e-19	29.39	Drought-responsive family protein	[more]
AT3G05700.1	1.8e-17	29.69	Drought-responsive family protein	[more]

BLAST of Carg12087 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VXU6\|DI194_ARATH	1.5e-21	32.55	Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19...	[more]
sp\|Q39083\|DI191_ARATH	2.0e-18	31.34	Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana OX=3702 GN=DI19-1 PE=1 SV...	[more]
sp\|O04259\|DI195_ARATH	2.6e-18	36.52	Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=DI19...	[more]
sp\|Q6NM26\|DI196_ARATH	7.6e-18	29.39	Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=DI19...	[more]
sp\|Q5W794\|DI192_ORYSJ	1.9e-16	30.95	Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of Carg12087 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BR26\|A0A1S3BR26_CUCME	5.5e-82	73.99	protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A2I4EZH7\|A0A2I4EZH7_9ROSI	2.3e-35	42.41	protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X1 OS=Juglans regia OX=512...	[more]
tr\|A0A2I4EZH1\|A0A2I4EZH1_9ROSI	8.7e-35	41.96	protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X2 OS=Juglans regia OX=512...	[more]
tr\|A0A2I4EZH9\|A0A2I4EZH9_9ROSI	1.5e-34	42.41	protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X3 OS=Juglans regia OX=512...	[more]
tr\|W9SA28\|W9SA28_9ROSA	1.4e-32	46.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007471 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033347	DI19
IPR027935	Di19_C
IPR008598	Di19_Zn_binding_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12087-RA	Carg12087-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008598	Drought induced 19 protein type, zinc-binding domain	PFAM	PF05605	zf-Di19	coord: 46..75 e-value: 4.1E-8 score: 33.3
IPR027935	Protein dehydration-induced 19, C-terminal	PFAM	PF14571	Di19_C	coord: 89..189 e-value: 9.4E-23 score: 80.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..158
None	No IPR available	PANTHER	PTHR31875:SF0	PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 3-RELATED	coord: 79..192
None	No IPR available	PANTHER	PTHR31875:SF0	PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 3-RELATED	coord: 1..75
IPR033347	Protein DEHYDRATION-INDUCED 19	PANTHER	PTHR31875	FAMILY NOT NAMED	coord: 1..75
IPR033347	Protein DEHYDRATION-INDUCED 19	PANTHER	PTHR31875	FAMILY NOT NAMED	coord: 79..192

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12087	Csa7G405880	Cucumber (Chinese Long) v2	carcuB0594
Carg12087	MELO3C015955	Melon (DHL92) v3.5.1	carmeB0566
Carg12087	ClCG09G005430	Watermelon (Charleston Gray)	carwcgB0547
Carg12087	CSPI07G17850	Wild cucumber (PI 183967)	carcpiB0599
Carg12087	Cucsa.205280	Cucumber (Gy14) v1	carcgyB0640
Carg12087	CmaCh08G004450	Cucurbita maxima (Rimu)	carcmaB0792
Carg12087	CmaCh17G010610	Cucurbita maxima (Rimu)	carcmaB0787
Carg12087	CmoCh17G010320	Cucurbita moschata (Rifu)	carcmoB0767
Carg12087	CmoCh08G004350	Cucurbita moschata (Rifu)	carcmoB0771
Carg12087	Lsi02G024400	Bottle gourd (USVL1VR-Ls)	carlsiB511
Carg12087	Cp4.1LG17g07350	Cucurbita pepo (Zucchini)	carcpeB0803
Carg12087	Cp4.1LG12g06000	Cucurbita pepo (Zucchini)	carcpeB0801
Carg12087	CsGy7G016310	Cucumber (Gy14) v2	carcgybB0569
Carg12087	MELO3C015955.2	Melon (DHL92) v3.6.1	carmedB0573
Carg12087	CsaV3_7G029650	Cucumber (Chinese Long) v3	carcucB0601
Carg12087	Cla97C09G167890	Watermelon (97103) v2	carwmbB0590
Carg12087	Bhi09G000772	Wax gourd	carwgoB0674

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12087	Carg07149	Silver-seed gourd	carcarB130

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12087	Cucurbita maxima (Rimu)	carcmaB0786
Carg12087	Cucurbita moschata (Rifu)	carcmoB0766
Carg12087	Watermelon (97103) v1	carwmB0559