CsaV3_7G029650 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G029650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionprotein DEHYDRATION-INDUCED 19 homolog 4-like
Locationchr7 : 18752441 .. 18755866 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGTAAGACTGAAATATACCTCTAGATGTCTAGGCATATTAATATATGATGCTTTTTATCTGACTCAAAATTAAGCACTTTCTGCATGCATCCGTTTCACCACAATTATAGTTTTTGCTGGTTCCTAGGCATGCATTCTGGTTTAGGTTTGTTATTAAATTTATTTCTCGCAGACATATCATTTGCTTCTTCCTATGAGTTTCGATAGCCTTGAGTTACTGTTGTGACTTGTGAGCGTCACAATATGTTCACAGTTCATTGGTGGTACATAGCTCATATCTTTTTCACAATGGGGAAAAATTGACGAGGCCTTGAAATTAGCACTTGCATCACTAGAATATAGTATAACCAAAATGCATTTAAAATGTAGGAGTTGAAGTCCATCAAAATTCCTTCTAATCAAAACGTGCTTTTGGACAATTATAATGATAATACCCAGAATTATATATGGTTGAGCTACAATAGAATGTAGAAGTTTGATATTTGTAATATAATAATATCAAGGCCTCGATGTTTTTGGACTAAAATGTATGGGCTTATTCTGGGAGGTGAATGTTAGATGGGATTAAATAACAATTGCATAAAGTAGTGAACATTTAGTTCTATTCCCTATCTAAATGCATGTTAGGTGATACTGTGCGGTCTTTCAGTTTTCATTTCCCTCAAGTGTTACAGTGGTCGTTGCGATTTTGGAATTATACTGTCATATGAGCTGTAAATGAACCTGTATCAATTTCATACCTTTGCATTTGGATCCATTTAACTAATGGCATTAAATTGCTATTCATTTCTCATGTTGATCGAGTTATATTTGCTCTTCCCCACTGTCTTAGCAATCGCAGCAAGTCTATAACTTCTGTGATGGAGATAACTCATATCCTATAATCGGCATCTCCAACCTAATGATATTTTATTTGCACATATGCAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATGTTAGGCAATGATTTATAATAGAGAGCACAGAGGCAGAAGAGGAAAGTTATATCAAAATTTTAGGAAATGCTATTATTTTTAGTGTTTTTATTTCAATGTTTATATTACTCTTGTGAGAACATGTAGGAATTGAAGTGTATCAACGTGGGTTAGTAAATATTAGCTAGAAGGTGTAAGCATTATCCAAGTTATTTTCCTGGTTATGGAAATGCAGTTGGTGTTCTTCAATCAAAGATTAGTATTAGTAAATTGGTAGTCAAGATGAATGAGCTTGTAAATTTGGTTTAAGAAGTTAACCTTACTATGACTCGAGACTATTATCAAGTTTCAACCTAACAAGGACCTAATGTTTTTTTAATTAAAATTAAGTACTAGAATCTTACAGTTGAATTAGCAGTTTAGTCTCTATAGCCCAGATTTTGTTCCATATGGTACTGATGTTTTTGAATTTTTATTCGATTTTTGTGGTTTGATCAAATTTGACCGACGGTGTCTTTTGATAGTGTTATCAATGTTATGTTTTCACTCATTTTTCATAAATTATCTATCAAAATACAAAGAAATTTTTGGTTTTCAAATTGATCTCTAAAATATTTTAGAAAAGTGTAGAAACCAAAATGAGTTTGATAGCGTTGCATAAGTCCATTACAAAGAAACATTAACCAAAGGAGGATGAATTTGTCTTTTGTTCCTATCACGATTTAAGTGTAGCATGACATACCTAATTTGAAAGTTTGTCCAGGATGGTATGAATCAAGTGTTGGGTTATGTGAGTTTGAAAAATAATGTGAATTTTATCGCTTGCTCAAGTCTTAGATCAATGTTGTTAAATCTACGATACCTTCTTGATAAACTAAATCCTAAACACAAAATGTTGTCTAATCCCAACTTAAGCATAATATTATAACTGATAACAATTTTTTCTTTTAGAAAAATAAAAGTTACGTTCCAACCACCAATAAAAAAATATGCATGTGAGTATAATTTAACTTTCATATTATGTATCATCAATTTCAAAGTTAGATGTTCAAATTTCTTTCCTTCGTGCTGAACTCAATGAAAATAAATAAATAATACATAAGACTTATAGCTATATAAACACGATTGATGAGTAGAGTATTCTAATAATTAGACCTGAGGTTGGTTAGGTGTTTTGGGTTATAAATAAGAGGGAGAGCAAGGTTAGAGGGGTGGGAGAGTTTGGTGGGTGTTCGGCTCTTGAGACAGAATGCTCAACCCTTTATAATGTGCTTTGGAATTTTTGGTTAGGCTTGTAATGGTTTCCTATGGTGGACATTGTTGCTTATAATACAATTGTGTTTTTGTGGAAGAAAACCCCTAACACAATAAAGAAAGATCAAGTGTGCATATCTAGAACAATGCACTCTTGACCTTTTACAACCTAATTTGATTTATTGGTCAACATATTTTTAAGTTAAAAGATGCTAATTATATATAACTACTCTTGAACTCTCTTTAGTTTCAAAAGTTTTTATGTACTTTTAATACTTCAATGTTATCCTAAAGTTTTAGAATCTTTTATTTTGAATTTTGGACAAAAACAAAAAATCAAAACTTTGGGCAATAAATGAATTCAAGTTTTTGTTTGAGGTCATCTATCACATTTGTTTTTTTGTTTGAAATGCTAAAAAAGATTCTATCATGTACAGACCATTTTTTTAAATGGAAAAAGTTCACAAATCCACAATGTAAAATACCAAAATTATCCTAGTCACACACGCGATAAATTAGTTGTACACGCGATACTCAATCGTGTAGGTTTTAATACACGATATCGGGCATACCAGACATCGAGATGAAATTTTATTGCCTTTAATTCATTCAATATCTGTCATATAATGCATCAAGATGAAAGACAAAAGTGTAAATCTACACAATCATGTACTTTGTTTTAAACTATTGACTTTCATATTTAAATGATCGTGTAGATCATGAGATACGATCTTTAGTTGCTCCAAGATGCTTCGAGATAAAAGAATTCTAACTTTAATATATTCCATCGTGAGTTTATAATGTCCCAAAATGTCCTTAATGAAAGAATTATTCCGTTTGTTATTAGATCTCGGACTTTAGTGACATTGAGATGATTCAATCTTTATTTTATTCGATTTTAGACATACGCTGCCTTTAGATGACCTAAGATTAATAAATGGTGAGAGCATATATGAGCTTTTCTTATTTTGGGTTTTGTTAGAATGATGTAAATTGCTCCATAAAGTTGTATTGTTTATAATAATGTAGTGGGGATGATAAGTGA

mRNA sequence

ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA

Coding sequence (CDS)

ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA

Protein sequence

MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRCDFVRDLVFSVIGDDK
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_004136009.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32
Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDFVRDLVFSV +G+D
Sbjct: 200 RRCDFVRDLVFSVMLGND 217

BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_008451522.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 2.1e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPS+KEK+EEKVVDDTLSERDVQLSSIPD NQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKVVDDTLSERDVQLSSIPDTNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDF+RDLVFSV +GDD
Sbjct: 200 RRCDFIRDLVFSVMLGDD 217

BLAST of CsaV3_7G029650 vs. NCBI nr
Match: KGN44982.1 (hypothetical protein Csa_7G405880 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
          MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60

Query: 61 RRCDF 66
          RRCDF
Sbjct: 61 RRCDF 65

BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_022143934.1 (protein DEHYDRATION-INDUCED 19-like [Momordica charantia])

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAP+INESKT QP PS+KE LEEK +DDT SERDVQLSSIPD  +EEKT
Sbjct: 145 MAPDPLLSFLCNAPIINESKTAQPMPSSKENLEEKELDDTFSERDVQLSSIPDTKREEKT 204

Query: 61  RRCDFVRDLVFS-VIGD 77
           RRCDFVR LVFS ++GD
Sbjct: 205 RRCDFVRGLVFSAILGD 221

BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_022991238.1 (protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucurbita maxima])

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-25
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPV+NESKTVQP PS+KEKL+E  VDDTLSERD+ LSS+PD  QEEKT
Sbjct: 142 MAPDPLLSFLCNAPVVNESKTVQPVPSSKEKLKESDVDDTLSERDIHLSSLPDTKQEEKT 201

Query: 61  RRCDFVRDLVFSVI-GDD 78
           RRCDFV+ LV SVI G+D
Sbjct: 202 RRCDFVQGLVLSVIVGED 219

BLAST of CsaV3_7G029650 vs. TAIR10
Match: AT1G02750.1 (Drought-responsive family protein)

HSP 1 Score: 42.4 bits (98), Expect = 1.6e-04
Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 0

Query: 4   DPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRC 63
           D  LSF+ N+ + N++K V P+ S ++K    + D + ++       + D ++ EK ++C
Sbjct: 144 DQFLSFINNSALPNQTKLVLPDSSVEDK--NPIKDSSAAKEGTSSCPLSDSDKLEKAKKC 203

Query: 64  DFVRDLVFSVIGDDK 79
           +FV+ L+ S + DD+
Sbjct: 204 EFVQGLLSSAMFDDE 216

BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A1S3BR26|A0A1S3BR26_CUCME (protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103492783 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           MAPDPLLSFLCNAPVINESKTVQPEPS+KEK+EEKVVDDTLSERDVQLSSIPD NQEEKT
Sbjct: 140 MAPDPLLSFLCNAPVINESKTVQPEPSSKEKMEEKVVDDTLSERDVQLSSIPDTNQEEKT 199

Query: 61  RRCDFVRDLVFSV-IGDD 78
           RRCDF+RDLVFSV +GDD
Sbjct: 200 RRCDFIRDLVFSVMLGDD 217

BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A0A0K9D8|A0A0A0K9D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405880 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
          MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT
Sbjct: 1  MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60

Query: 61 RRCDF 66
          RRCDF
Sbjct: 61 RRCDF 65

BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|B9GSE3|B9GSE3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           +APDPLLSFLCN P   ++++ QP  S+K  +EEK  D  L ER+  LS + D    EK 
Sbjct: 140 LAPDPLLSFLCNVPPAEKNESAQPSLSSKVTVEEKNSDVKLLERNDHLSPLSDEEHMEKA 199

Query: 61  RRCDFVRDLVFSVIGDD 78
           RR +FV+ L+ S I DD
Sbjct: 200 RRSEFVQGLLLSTIFDD 216

BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A2K2BLP8|A0A2K2BLP8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 1   MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKT 60
           +APDPLLSFLCN P   ++++ QP  S+K  +EEK  D  L ER+  LS + D    EK 
Sbjct: 147 LAPDPLLSFLCNVPPAEKNESAQPSLSSKVTVEEKNSDVKLLERNDHLSPLSDEEHMEKA 206

Query: 61  RRCDFVRDLVFSVIGDD 78
           RR +FV+ L+ S I DD
Sbjct: 207 RRSEFVQGLLLSTIFDD 223

BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|F6H6U3|F6H6U3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01500 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-08
Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 3   PDPLL-SFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTR 62
           PDPLL SF+ NAPV+ E   VQP+ S +  + ++  D+  SER++Q   + D+ QEEK R
Sbjct: 174 PDPLLSSFMYNAPVVVEPVVVQPDSSAEASVVKESSDEGFSERNIQKPQLSDKEQEEKAR 233

Query: 63  RCDFVRDLVFSVIGDD 78
           RC+FV+ L+ S I +D
Sbjct: 234 RCEFVQGLLLSTILED 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004136009.11.9e-3296.15PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4 [Cucumis sativus][more]
XP_008451522.12.1e-3192.31PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo][more]
KGN44982.11.8e-27100.00hypothetical protein Csa_7G405880 [Cucumis sativus][more]
XP_022143934.11.3e-2580.52protein DEHYDRATION-INDUCED 19-like [Momordica charantia][more]
XP_022991238.13.8e-2579.49protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G02750.11.6e-0429.33Drought-responsive family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BR26|A0A1S3BR26_CUCME1.4e-3192.31protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0A0K9D8|A0A0A0K9D8_CUCSA1.2e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405880 PE=4 SV=1[more]
tr|B9GSE3|B9GSE3_POPTR2.5e-0948.05Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=... [more]
tr|A0A2K2BLP8|A0A2K2BLP8_POPTR2.5e-0948.05Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=... [more]
tr|F6H6U3|F6H6U3_VITVI1.6e-0846.05Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01500 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR033347DI19
IPR027935Di19_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G029650.1CsaV3_7G029650.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027935Protein dehydration-induced 19, C-terminalPFAMPF14571Di19_Ccoord: 1..74
e-value: 6.8E-19
score: 68.2
NoneNo IPR availablePANTHERPTHR31875:SF6PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4-RELATEDcoord: 2..78
IPR033347Protein DEHYDRATION-INDUCED 19PANTHERPTHR31875FAMILY NOT NAMEDcoord: 2..78

The following gene(s) are paralogous to this gene:

None