CsaV3_7G029650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGTAAGACTGAAATATACCTCTAGATGTCTAGGCATATTAATATATGATGCTTTTTATCTGACTCAAAATTAAGCACTTTCTGCATGCATCCGTTTCACCACAATTATAGTTTTTGCTGGTTCCTAGGCATGCATTCTGGTTTAGGTTTGTTATTAAATTTATTTCTCGCAGACATATCATTTGCTTCTTCCTATGAGTTTCGATAGCCTTGAGTTACTGTTGTGACTTGTGAGCGTCACAATATGTTCACAGTTCATTGGTGGTACATAGCTCATATCTTTTTCACAATGGGGAAAAATTGACGAGGCCTTGAAATTAGCACTTGCATCACTAGAATATAGTATAACCAAAATGCATTTAAAATGTAGGAGTTGAAGTCCATCAAAATTCCTTCTAATCAAAACGTGCTTTTGGACAATTATAATGATAATACCCAGAATTATATATGGTTGAGCTACAATAGAATGTAGAAGTTTGATATTTGTAATATAATAATATCAAGGCCTCGATGTTTTTGGACTAAAATGTATGGGCTTATTCTGGGAGGTGAATGTTAGATGGGATTAAATAACAATTGCATAAAGTAGTGAACATTTAGTTCTATTCCCTATCTAAATGCATGTTAGGTGATACTGTGCGGTCTTTCAGTTTTCATTTCCCTCAAGTGTTACAGTGGTCGTTGCGATTTTGGAATTATACTGTCATATGAGCTGTAAATGAACCTGTATCAATTTCATACCTTTGCATTTGGATCCATTTAACTAATGGCATTAAATTGCTATTCATTTCTCATGTTGATCGAGTTATATTTGCTCTTCCCCACTGTCTTAGCAATCGCAGCAAGTCTATAACTTCTGTGATGGAGATAACTCATATCCTATAATCGGCATCTCCAACCTAATGATATTTTATTTGCACATATGCAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATGTTAGGCAATGATTTATAATAGAGAGCACAGAGGCAGAAGAGGAAAGTTATATCAAAATTTTAGGAAATGCTATTATTTTTAGTGTTTTTATTTCAATGTTTATATTACTCTTGTGAGAACATGTAGGAATTGAAGTGTATCAACGTGGGTTAGTAAATATTAGCTAGAAGGTGTAAGCATTATCCAAGTTATTTTCCTGGTTATGGAAATGCAGTTGGTGTTCTTCAATCAAAGATTAGTATTAGTAAATTGGTAGTCAAGATGAATGAGCTTGTAAATTTGGTTTAAGAAGTTAACCTTACTATGACTCGAGACTATTATCAAGTTTCAACCTAACAAGGACCTAATGTTTTTTTAATTAAAATTAAGTACTAGAATCTTACAGTTGAATTAGCAGTTTAGTCTCTATAGCCCAGATTTTGTTCCATATGGTACTGATGTTTTTGAATTTTTATTCGATTTTTGTGGTTTGATCAAATTTGACCGACGGTGTCTTTTGATAGTGTTATCAATGTTATGTTTTCACTCATTTTTCATAAATTATCTATCAAAATACAAAGAAATTTTTGGTTTTCAAATTGATCTCTAAAATATTTTAGAAAAGTGTAGAAACCAAAATGAGTTTGATAGCGTTGCATAAGTCCATTACAAAGAAACATTAACCAAAGGAGGATGAATTTGTCTTTTGTTCCTATCACGATTTAAGTGTAGCATGACATACCTAATTTGAAAGTTTGTCCAGGATGGTATGAATCAAGTGTTGGGTTATGTGAGTTTGAAAAATAATGTGAATTTTATCGCTTGCTCAAGTCTTAGATCAATGTTGTTAAATCTACGATACCTTCTTGATAAACTAAATCCTAAACACAAAATGTTGTCTAATCCCAACTTAAGCATAATATTATAACTGATAACAATTTTTTCTTTTAGAAAAATAAAAGTTACGTTCCAACCACCAATAAAAAAATATGCATGTGAGTATAATTTAACTTTCATATTATGTATCATCAATTTCAAAGTTAGATGTTCAAATTTCTTTCCTTCGTGCTGAACTCAATGAAAATAAATAAATAATACATAAGACTTATAGCTATATAAACACGATTGATGAGTAGAGTATTCTAATAATTAGACCTGAGGTTGGTTAGGTGTTTTGGGTTATAAATAAGAGGGAGAGCAAGGTTAGAGGGGTGGGAGAGTTTGGTGGGTGTTCGGCTCTTGAGACAGAATGCTCAACCCTTTATAATGTGCTTTGGAATTTTTGGTTAGGCTTGTAATGGTTTCCTATGGTGGACATTGTTGCTTATAATACAATTGTGTTTTTGTGGAAGAAAACCCCTAACACAATAAAGAAAGATCAAGTGTGCATATCTAGAACAATGCACTCTTGACCTTTTACAACCTAATTTGATTTATTGGTCAACATATTTTTAAGTTAAAAGATGCTAATTATATATAACTACTCTTGAACTCTCTTTAGTTTCAAAAGTTTTTATGTACTTTTAATACTTCAATGTTATCCTAAAGTTTTAGAATCTTTTATTTTGAATTTTGGACAAAAACAAAAAATCAAAACTTTGGGCAATAAATGAATTCAAGTTTTTGTTTGAGGTCATCTATCACATTTGTTTTTTTGTTTGAAATGCTAAAAAAGATTCTATCATGTACAGACCATTTTTTTAAATGGAAAAAGTTCACAAATCCACAATGTAAAATACCAAAATTATCCTAGTCACACACGCGATAAATTAGTTGTACACGCGATACTCAATCGTGTAGGTTTTAATACACGATATCGGGCATACCAGACATCGAGATGAAATTTTATTGCCTTTAATTCATTCAATATCTGTCATATAATGCATCAAGATGAAAGACAAAAGTGTAAATCTACACAATCATGTACTTTGTTTTAAACTATTGACTTTCATATTTAAATGATCGTGTAGATCATGAGATACGATCTTTAGTTGCTCCAAGATGCTTCGAGATAAAAGAATTCTAACTTTAATATATTCCATCGTGAGTTTATAATGTCCCAAAATGTCCTTAATGAAAGAATTATTCCGTTTGTTATTAGATCTCGGACTTTAGTGACATTGAGATGATTCAATCTTTATTTTATTCGATTTTAGACATACGCTGCCTTTAGATGACCTAAGATTAATAAATGGTGAGAGCATATATGAGCTTTTCTTATTTTGGGTTTTGTTAGAATGATGTAAATTGCTCCATAAAGTTGTATTGTTTATAATAATGTAGTGGGGATGATAAGTGA ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA ATGGCACCTGATCCATTGTTGTCGTTTTTATGCAATGCACCTGTCATCAATGAGTCTAAAACTGTTCAGCCTGAGCCTTCAAATAAAGAAAAATTGGAGGAAAAAGTTGTAGATGATACATTGTCTGAAAGGGATGTCCAGTTATCTTCCATACCTGACAGGAACCAAGAAGAGAAAACTCGGAGATGTGACTTCGTACGCGATTTAGTTTTCTCTGTCATTGGGGATGATAAGTGA MAPDPLLSFLCNAPVINESKTVQPEPSNKEKLEEKVVDDTLSERDVQLSSIPDRNQEEKTRRCDFVRDLVFSVIGDDK
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_004136009.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4 [Cucumis sativus]) HSP 1 Score: 147.5 bits (371), Expect = 1.9e-32 Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_008451522.1 (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucumis melo]) HSP 1 Score: 144.1 bits (362), Expect = 2.1e-31 Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: KGN44982.1 (hypothetical protein Csa_7G405880 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_022143934.1 (protein DEHYDRATION-INDUCED 19-like [Momordica charantia]) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25 Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. NCBI nr
Match: XP_022991238.1 (protein DEHYDRATION-INDUCED 19 homolog 4-like [Cucurbita maxima]) HSP 1 Score: 123.2 bits (308), Expect = 3.8e-25 Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TAIR10
Match: AT1G02750.1 (Drought-responsive family protein) HSP 1 Score: 42.4 bits (98), Expect = 1.6e-04 Identity = 22/75 (29.33%), Postives = 44/75 (58.67%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A1S3BR26|A0A1S3BR26_CUCME (protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103492783 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.4e-31 Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A0A0K9D8|A0A0A0K9D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405880 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-27 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|B9GSE3|B9GSE3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|A0A2K2BLP8|A0A2K2BLP8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G200500v3 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-09 Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0
BLAST of CsaV3_7G029650 vs. TrEMBL
Match: tr|F6H6U3|F6H6U3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01500 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-08 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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