Carg11953 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11953
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transmembrane protein 208 homolog
Location	Cucurbita_argyrosperma_scaffold_037 : 43001 .. 47063 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCGAAGCCGAAATCAGAGGCCTCATTGTTCTTTCCTCCTCTTCGGATCATTCAGATACCCTGCCATAACTGAGCAAGATTTTGCTGCAATTTCACCAAACAATTTCGGAATCGAGCCGACATAGATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTACGCATTTCTATTCGATAGTTTCTCTTCAATTTTCTTCATTCTTACACCCGTCCTTAGTGATTTAGTATTCATGTTCATCCTTGACTTTACTTGTTCGAAGATTTCTGGAGTTCTAACCTGAAGTAGTCAAAATCAATCGATTTTTCCTTTGGATCATGTGTTTTTCTTTTGGAGATCTGACTTGGAATTCCGAGATGGAACTCGTTGTAGGATGATGTGTTTTTTCGTAATGAAGCAAGACTGATTGTGTTGCAATGTTAATAATTGAATATTTTTGTTATAAAATTTTCTGGAGCTCCTCCTCGAAATAATCAAAATCGATCGATTTTTGTTTGTTCTTCGCACCTTACGTTTCGTTTTCTTAAATTGACTTGGAATTCCGAGCTGGAAATAATTGTAGGATGTGGTGCATGTTTCATAAACAAACAACAAACTGTTACGTCCTATGTCCATCTGCTGAAAGTTTTAATTTAACATGTTAATTTCTAATACTATGATTCTGTTGGAAACAAAAAATGAAGATAGTTTTTATTTGTTTATTTTTTCTCTTCGGTAACAATCCCCAAATGTATGTTCTCCAAATCAGATTATTGTAAATTAAAGTCTGGCAGGTATCAACAAATGTGCACGAGAAACTTATGAATGTAAGGTCGAGGAAGATCTTTTGTGATTTCTTCTGAGCAATATGAGATGACCAAAAGTTGAAGGATGGAGAATTAGTTTAGATTTTTTATGTTTCATGCACTAAGTTCAGAGTTTGTTTTGTATGGTAAATTCTTGTTTTGGATTACTAATTTTGATCCTAAGAGTTGTCAAAGGGATAAGCACCCTTCTGAGCATATCCCAATGCTTCATCATATCATTTATTTTCACCGTAACCATGATTCATAAAGCGTAGGAGCGCCGTGTGGCTTAGTGGAACTGGTATGACTTCAGTGTTATGCTGTTTACTGTGTGTAACTTGTTTGTGCAGGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGGTATGTCCTCTGTCTTCTTAATGTATGTCATTACATGTCAGTTTCATGCATGTTTTTGTCTTCTTGATATAGAGTATAATTGTTGAATACAGACCTGACATATTTAATTGTTCTGTAACCCAAGTTTAAATGAACCGTAGCTCTGAAACTTGCTAAGACTTGGTATGATATTGTTCACCGTGGATCAAATTTCTTGAGGAAGATGAAGCTATTTTTTTCCGGTTGTCATCCCAAAATTCAGTATTAAATGCTTGAAATGGAAGTAAATAGTGATGTGCTAATCGGATTCATTGATTCACCGAGGATAACATGAAGCTATTTTTTCTGGTTGTCATCCCAAAATTCAGTATTAAATGCTTGAAATGGAGGTGAATAGTGATGTGCTAATCGGATTCACTGATTCACAGAGGATAATATGTCACACAATCAATTGATTAAAAACACATCAGATGACTGCAATTTCAGCTCAAGTAACCCGAGGGAATTCTCATTTCTTCCCACTCTTCTTAAGCCTAGCATCTCCAAAGGTCCCCTTCTGTTGGGCCTTTGCTCTAAACTCCCTGAGCGTCTTTTCCTCTTCCTTCATCTTTTGAATTTTGGCCATATCAACCTCGTTGTAATCTTTCTTCTCAACCTTGAGTTTGCTTTCCTTCCTAGCTTGTATGACATGGCTGAGATGTTGCTAGGGATGCTCATGCGCGGCAATTGATGGCTTGATTCACTGATATACAACTGCGGGATATTATTCTATTTCAGTTCACTCTCTGGATATAATTTCCTTTCCTCCTGGATTTTATGACTTAAATTGACTTTCATTTATAGCATTGTAAATTGATATGTAGTATACCTGTCATTTGGCTTAATAATTCTGGATAAGGGTGATGCACATAAATATCACGGTTGTTTGGTCTATCGCTTTACTGGGTTACTTTAAATTTTCTTCCTTGAGAAAACTCCAAATTAGATATAAACATCTAAGCAAGCTTGAAACTTAACATGGTATTGGGTTAAATTTTTTTTGGAAATGGCCCTGCTCCACTGATTACTTTTGATCAATTGATGTGTTACTTGCATCCTCAAAGTGACAATAAAATCAATTGCTAACCTTTTTTACCGTACATAATATTAAGAGATTCTGTAGAAGGTTTTTTCCGTCCGGTCATAAAGGTGGTGGAGGTTGGTGGGACTTGGGATACTATAGAGATTGAGTTAAAATTATTTTAATCAGGCGGTTCTAGTTTTTAAGCTGACAAATAGTCAGTGTTGTAAACATGGCAAAGTTTAACTTTATCTCTGAATTGAAAATGTGTTACATTTTCAAGTAGCACTGCCTTTTCCTCTGAAAGAAGGGCAGGAAGTTCAATGACTGAAATACAATGTAATGCAGGCTGGGTCGCATTTAAGGCCATCTATCTCGTAACTTGTTGTTTCTTATGTGCTTTGGTAATTTATATGATAATTTCTTTGGGATTCGAACTTGGAAAATCTCATTATAGCAAAATGAGCTTTGTTTTTTTTATTAGACAGATAAAGTAATTGACTTCAAAGTTAGATCAATTATGAACCGATATGTTCATATGGCTACAAGTTCTTTGAAACCTCACGGCACTGACATTGAGTGAAAGATTCACCTAGAACAGTTACCACTGCCGTAGTGAGAATTGGATTGACAGAACTGGTCTCGGAGGCTTTCATCCATAAACAGTTTCTTGGCATTTCAGTAAGTAATTGAAACATCTTTGATGGGTTGCCTTGTTCTTTGCAGCTACATGCATGACGTGATCTACATTACGAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGGTAAGGTCCAAATACTTTTGAAATTGAACTTAGACATATTTAGTGTAATATATAGCCTATGAACAACCCTGATATTTGGGTGTGAAATAATGTCATTGATATATCTTTCTGAAGTGACTTTAATTGTACATCTAAACATTATTTTCATTATTACCTATATTAACAAATGTTCATGCATCTGCTAGAAAGTTCAAAATACTTCGTGGGCGACCAACAAGTTAAAATAGGCACATCTAACTCCGTTTGATGTTCATTTTTCTGTTGCTCTGCAGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTAATTAAGAGTTTATTGTCGCACGGTTCAGAGGTAATCTATCCTCACCAAACAAGATTTCCTGTATTTTAAACACGGCCCGGTCTTCTCTTTTCATTTAGGCGTGTACTCGTGTGTGTCGTTTAGGATGAACCTGAGGATGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTATGAAAACCAAGAATAGATAATCTTCTCTTCTAAATTAAACGGAATCAACTTAAGTAATGAGATGCAAATTTGAGCAGATGGACAGCAGACACAGTCAAGTTATAGGTACCATTTGAAGTTAGTTTGTGTATTTTTCTGACTAATTATAACAGGAAAATAAGGGGCAGAAGTATATCACTGTAACCTCCATTCTGTCAACTGAGCTTTTAGAAGTCCCTGTTTCCTCTTTCAAAATGACATCACAGGTACACAACTTTTGCAGCTTTGGTTTCCTTTAGAACAGACAGATCTAGGAGAGGGATATCAAAGCAATAGCTTTAATCTCTTTT

mRNA sequence

ACGCGAAGCCGAAATCAGAGGCCTCATTGTTCTTTCCTCCTCTTCGGATCATTCAGATACCCTGCCATAACTGAGCAAGATTTTGCTGCAATTTCACCAAACAATTTCGGAATCGAGCCGACATAGATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATGACGTGATCTACATTACGAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTAATTAAGAGTTTATTGTCGCACGGTTCAGAGGATGAACCTGAGGATGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTATGAAAACCAAGAATAGATAATCTTCTCTTCTAAATTAAACGGAATCAACTTAAGTAATGAGATGCAAATTTGAGCAGATGGACAGCAGACACAGTCAAGTTATAGGTACCATTTGAAGTTAGTTTGTGTATTTTTCTGACTAATTATAACAGGAAAATAAGGGGCAGAAGTATATCACTGTAACCTCCATTCTGTCAACTGAGCTTTTAGAAGTCCCTGTTTCCTCTTTCAAAATGACATCACAGGTACACAACTTTTGCAGCTTTGGTTTCCTTTAGAACAGACAGATCTAGGAGAGGGATATCAAAGCAATAGCTTTAATCTCTTTT

Coding sequence (CDS)

ATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGTACTGGTGGAATTTGTGGCTACATGCATGACGTGATCTACATTACGAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGATTCCAGCATTTGGGGTATACAAATCTTCTGGTTTAATTAAGAGTTTATTGTCGCACGGTTCAGAGGATGAACCTGAGGATGAGAAGACTCGCAAGAAGAGGGAAAAGATGGAGAAGAAAGCTTCAAGAGTGAAGTTTATGAAAACCAAGAATAGATAA

Protein sequence

MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFIPYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR

Homology

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BLAST of Carg11953 vs. NCBI nr
Match: XP_022946520.1 (transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmembrane protein 208 homolog [Cucurbita maxima])

HSP 1 Score: 313.9 bits (803), Expect = 3.3e-82
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 173

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BLAST of Carg11953 vs. NCBI nr
Match: XP_023521195.1 (transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLAKMADPTYGDDGELLDGGFDM TGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR
Sbjct: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 173

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BLAST of Carg11953 vs. NCBI nr
Match: XP_004144713.1 (PREDICTED: transmembrane protein 208 homolog [Cucumis sativus] >KGN61073.1 hypothetical protein Csa_2G036710 [Cucumis sativus])

HSP 1 Score: 293.9 bits (751), Expect = 3.6e-76
Identity = 162/173 (93.64%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEP XXXXXXXXXXXXXXXSRVKFMKTKNR
Sbjct: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPXXXXXXXXXXXXXXXXSRVKFMKTKNR 173

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BLAST of Carg11953 vs. NCBI nr
Match: XP_008452429.1 (PREDICTED: transmembrane protein 208 homolog [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 3.0e-75
Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLIVTS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA PTYGDDGELLDGGFDMST GICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFGVYKSSGLI+ LLS GSEDEP XXXXXXXXXXXXXXX  VKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIRGLLSQGSEDEPXXXXXXXXXXXXXXXXXXVKFVKTKNR 173

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BLAST of Carg11953 vs. NCBI nr
Match: XP_022153357.1 (transmembrane protein 208 homolog [Momordica charantia])

HSP 1 Score: 290.0 bits (741), Expect = 5.2e-75
Identity = 143/173 (82.66%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNVIYI+VR+LIFHSSFTWKHW+GLIVTSAAYFI
Sbjct: 1   MANQGAKKRKEENVRHMANLRRLIIACNVIYIMVRLLIFHSSFTWKHWIGLIVTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQLAKMA+PTYGDDGELLDGGFDMSTGGICGY+HDVIYITSFVQIMSI+SGKFWYTYL
Sbjct: 61  PYNQLAKMANPTYGDDGELLDGGFDMSTGGICGYLHDVIYITSFVQIMSIVSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFG YKSSG I+ LLS GSED  E               SRVKF+KTKNR
Sbjct: 121 VIPAFGAYKSSGFIRGLLSQGSEDVAEDEKTRKKREKMEKKASRVKFLKTKNR 173

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BLAST of Carg11953 vs. TAIR10
Match: AT2G23940.1 (Protein of unknown function (DUF788))

HSP 1 Score: 234.6 bits (597), Expect = 4.7e-62
Identity = 113/173 (65.32%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENA+HMA LRR+IIA N +Y +VRMLIF+SSFTWKHW+GL++TS AY  
Sbjct: 1   MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QL +MA P+  DDGEL+DGGFDM+TGGICGY+HDVIYIT FVQ+ SI++GKFWYTYL
Sbjct: 61  PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYLHDVIYITCFVQLASIITGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFGVYK+SGLI+  +S GSE   E               SR + +KT+ R
Sbjct: 121 VIPAFGVYKASGLIRGFMSQGSEGGVEDEKSRKKREKMERKASRGQVVKTRTR 173

[Close]

BLAST of Carg11953 vs. TAIR10
Match: AT4G30500.1 (Protein of unknown function (DUF788))

HSP 1 Score: 222.2 bits (565), Expect = 2.4e-58
Identity = 108/173 (62.43%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRK+ENARHMA LR ++I CN++Y+LVR++I HSS TWK+W+GL++TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY  L +MA P+  D GELLDGGFDMST G+CGY+HDV+YIT FVQ+ SI+SGKFWY YL
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQVGSIISGKFWYAYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFG YK+SGLIK LLSHGSE   E               SR + +KT++R
Sbjct: 121 VIPAFGAYKASGLIKGLLSHGSEGGVEDEKTRKKREKMERKASRGQVVKTRSR 173

[Close]

BLAST of Carg11953 vs. Swiss-Prot
Match: sp|Q6NYP0|TM208_DANRE (Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 47/125 (37.60%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IYI V +L+F++S ++  W  L+   A Y  
Sbjct: 7   VGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVG 66

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y  ++ MA P + +DG LLDGG D++   G+  ++ DVI +T+ VQ++S LS  FWY +
Sbjct: 67  SYRSMSAMAKPAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLW 126

Query: 121 LVIPA 125
           L+ PA
Sbjct: 127 LLAPA 131

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BLAST of Carg11953 vs. Swiss-Prot
Match: sp|Q54UB0|TM208_DICDI (Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem208 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 47/129 (36.43%), Postives = 74/129 (57.36%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MAN GAKKRK +N + +  +R ++ A  + YIL R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
            Y  +  M   TY ++GEL+DGG D++ GG+  Y  D+IY+   +Q + ++S K  Y  L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLIL 120

Query: 121 VIPAFGVYK 130
           VIPAF ++K
Sbjct: 121 VIPAFAIFK 129

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BLAST of Carg11953 vs. Swiss-Prot
Match: sp|Q3SZZ5|TM208_BOVIN (Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.5e-14
Identity = 42/129 (32.56%), Postives = 75/129 (58.14%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV +++F+SS ++  W+ L+ + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ ++ MA   + +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVY 129
           L+ P   +Y
Sbjct: 127 LLAPGRALY 135

[Close]

BLAST of Carg11953 vs. Swiss-Prot
Match: sp|Q9CR96|TM208_MOUSE (Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 42/129 (32.56%), Postives = 74/129 (57.36%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGA 66

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ ++ MA  ++ +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126

Query: 121 LVIPAFGVY 129
           L+ P   +Y
Sbjct: 127 LLAPGRALY 135

[Close]

BLAST of Carg11953 vs. Swiss-Prot
Match: sp|Q9BTX3|TM208_HUMAN (Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-13
Identity = 42/129 (32.56%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           +  +G K+  EEN   +    R+I+  N IY LV ++ F+SS ++  W+ L  + A Y  
Sbjct: 7   VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMS-TGGICGYMHDVIYITSFVQIMSILSGKFWYTY 120
            Y+ ++ MA   + +DG L+DGG D++   G+  ++ DVI +T+ VQ++S  S   W  +
Sbjct: 67  SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126

Query: 121 LVIPAFGVY 129
           L+ P   +Y
Sbjct: 127 LLAPGRALY 135

[Close]

BLAST of Carg11953 vs. TrEMBL
Match: tr|A0A0A0LH45|A0A0A0LH45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.4e-76
Identity = 162/173 (93.64%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA P YGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIP FGVYKSSG I+ LLS GSEDEP XXXXXXXXXXXXXXXSRVKFMKTKNR
Sbjct: 121 VIPGFGVYKSSGFIRGLLSQGSEDEPXXXXXXXXXXXXXXXXSRVKFMKTKNR 173

[Close]

BLAST of Carg11953 vs. TrEMBL
Match: tr|A0A1S3BUY1|A0A1S3BUY1_CUCME (transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.0e-75
Identity = 161/173 (93.06%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLIVTS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PYNQL KMA PTYGDDGELLDGGFDMST GICGYMHDVIYITSFVQIMSILSGKFWYTYL
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFGVYKSSGLI+ LLS GSEDEP XXXXXXXXXXXXXXX  VKF+KTKNR
Sbjct: 121 VIPAFGVYKSSGLIRGLLSQGSEDEPXXXXXXXXXXXXXXXXXXVKFVKTKNR 173

[Close]

BLAST of Carg11953 vs. TrEMBL
Match: tr|A0A061GWQ7|A0A061GWQ7_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_038477 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.8e-68
Identity = 140/173 (80.92%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRR+IIACNVI++LVRMLIFHSSFTWKHWVGL++TSAAYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRIIIACNVIFVLVRMLIFHSSFTWKHWVGLVLTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QLA+MA PTY +DGELLDGGFDMSTGGICGY+HDVIYITSFVQ+MSI+S KFWYTYL
Sbjct: 61  PYQQLAQMAKPTYANDGELLDGGFDMSTGGICGYLHDVIYITSFVQLMSIISEKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFG YKS G I+  LS GSE E E    XXXXXXXXX  SR KF+KT+NR
Sbjct: 121 VIPAFGAYKSFGFIRGFLSQGSEGEVEDEKTXXXXXXXXXKASRPKFVKTRNR 173

[Close]

BLAST of Carg11953 vs. TrEMBL
Match: tr|A0A1U8K218|A0A1U8K218_GOSHI (transmembrane protein 208 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107912730 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.4e-67
Identity = 129/173 (74.57%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNV+Y+LVRMLIFHSSFTWKHWVGL++TS AYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRLIIACNVVYVLVRMLIFHSSFTWKHWVGLLLTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QL++MA P Y DDGELLDGGFDMSTGGICGY+HDVIYITSFVQ+MSI+S KFWYTYL
Sbjct: 61  PYQQLSQMAKPAYSDDGELLDGGFDMSTGGICGYLHDVIYITSFVQLMSIISDKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFG YKS G I+  LS GSE E E               SR K +KT+NR
Sbjct: 121 VIPAFGAYKSFGFIRGFLSLGSEGEVEDEKTRKKREKMEKKASRPKLVKTRNR 173

[Close]

BLAST of Carg11953 vs. TrEMBL
Match: tr|A0A2P5SG92|A0A2P5SG92_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04901 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.4e-67
Identity = 129/173 (74.57%), Postives = 141/173 (81.50%), Query Frame = 0


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNV+Y+LVRMLIFHSSFTWKHWVGL++TS AYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRLIIACNVVYVLVRMLIFHSSFTWKHWVGLLLTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQIMSILSGKFWYTYL 120
           PY QL++MA P Y DDGELLDGGFDMSTGGICGY+HDVIYITSFVQ+MSI+S KFWYTYL
Sbjct: 61  PYQQLSQMAKPAYSDDGELLDGGFDMSTGGICGYLHDVIYITSFVQLMSIISDKFWYTYL 120

Query: 121 VIPAFGVYKSSGLIKSLLSHGSEDEPEXXXXXXXXXXXXXXXSRVKFMKTKNR 174
           VIPAFG YKS G I+  LS GSE E E               SR K +KT+NR
Sbjct: 121 VIPAFGAYKSFGFIRGFLSLGSEGEVEDEKTRKKREKMEKKASRPKLVKTRNR 173

The following BLAST results are available for this feature:

BLAST of Carg11953 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946520.1	3.3e-82	100.00	transmembrane protein 208 homolog [Cucurbita moschata] >XP_022999772.1 transmemb...	[more]
XP_023521195.1	1.3e-81	99.42	transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_004144713.1	3.6e-76	93.64	PREDICTED: transmembrane protein 208 homolog [Cucumis sativus] >KGN61073.1 hypot...	[more]
XP_008452429.1	3.0e-75	93.06	PREDICTED: transmembrane protein 208 homolog [Cucumis melo]	[more]
XP_022153357.1	5.2e-75	82.66	transmembrane protein 208 homolog [Momordica charantia]	[more]

BLAST of Carg11953 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23940.1	4.7e-62	65.32	Protein of unknown function (DUF788)	[more]
AT4G30500.1	2.4e-58	62.43	Protein of unknown function (DUF788)	[more]

BLAST of Carg11953 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NYP0\|TM208_DANRE	1.2e-17	37.60	Transmembrane protein 208 OS=Danio rerio OX=7955 GN=tmem208 PE=2 SV=1	[more]
sp\|Q54UB0\|TM208_DICDI	2.0e-17	36.43	Transmembrane protein 208 homolog OS=Dictyostelium discoideum OX=44689 GN=tmem20...	[more]
sp\|Q3SZZ5\|TM208_BOVIN	4.5e-14	32.56	Transmembrane protein 208 OS=Bos taurus OX=9913 GN=TMEM208 PE=2 SV=1	[more]
sp\|Q9CR96\|TM208_MOUSE	2.3e-13	32.56	Transmembrane protein 208 OS=Mus musculus OX=10090 GN=Tmem208 PE=2 SV=1	[more]
sp\|Q9BTX3\|TM208_HUMAN	5.0e-13	32.56	Transmembrane protein 208 OS=Homo sapiens OX=9606 GN=TMEM208 PE=1 SV=1	[more]

BLAST of Carg11953 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LH45\|A0A0A0LH45_CUCSA	2.4e-76	93.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036710 PE=4 SV=1	[more]
tr\|A0A1S3BUY1\|A0A1S3BUY1_CUCME	2.0e-75	93.06	transmembrane protein 208 homolog OS=Cucumis melo OX=3656 GN=LOC103493461 PE=4 S...	[more]
tr\|A0A061GWQ7\|A0A061GWQ7_THECC	1.8e-68	80.92	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_038477 PE=4 ...	[more]
tr\|A0A1U8K218\|A0A1U8K218_GOSHI	3.4e-67	74.57	transmembrane protein 208 homolog OS=Gossypium hirsutum OX=3635 GN=LOC107912730 ...	[more]
tr\|A0A2P5SG92\|A0A2P5SG92_GOSBA	3.4e-67	74.57	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04901 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008506	SND2/TMEM208

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11953-RA	Carg11953-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	SRP-independent targeting protein 2/TMEM208	PFAM	PF05620	DUF788	coord: 1..162 e-value: 4.0E-57 score: 192.6
IPR008506	SRP-independent targeting protein 2/TMEM208	PANTHER	PTHR13505	FAMILY NOT NAMED	coord: 1..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11953	Csa2G036710	Cucumber (Chinese Long) v2	carcuB0591
Carg11953	MELO3C004109	Melon (DHL92) v3.5.1	carmeB0569
Carg11953	ClCG11G012690	Watermelon (Charleston Gray)	carwcgB0550
Carg11953	CSPI02G05420	Wild cucumber (PI 183967)	carcpiB0596
Carg11953	Cucsa.089940	Cucumber (Gy14) v1	carcgyB0639
Carg11953	CmaCh12G008350	Cucurbita maxima (Rimu)	carcmaB0785
Carg11953	CmoCh05G010310	Cucurbita moschata (Rifu)	carcmoB0769
Carg11953	CmoCh12G008400	Cucurbita moschata (Rifu)	carcmoB0765
Carg11953	Lsi11G007070	Bottle gourd (USVL1VR-Ls)	carlsiB510
Carg11953	Cp4.1LG07g06920	Cucurbita pepo (Zucchini)	carcpeB0806
Carg11953	Cp4.1LG00g04460	Cucurbita pepo (Zucchini)	carcpeB0799
Carg11953	CsGy2G005540	Cucumber (Gy14) v2	carcgybB0566
Carg11953	MELO3C004109.2	Melon (DHL92) v3.6.1	carmedB0576
Carg11953	CsaV3_2G007780	Cucumber (Chinese Long) v3	carcucB0598
Carg11953	Cla97C11G218560	Watermelon (97103) v2	carwmbB0587
Carg11953	Bhi06G001195	Wax gourd	carwgoB0671

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11953	Carg16414	Silver-seed gourd	carcarB523

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11953	Cucurbita maxima (Rimu)	carcmaB0790
Carg11953	Cucurbita pepo (Zucchini)	carcpeB0800