Cp4.1LG00g04460 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g04460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane protein
Location	Cp4.1LG00 : 16606338 .. 16608204 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTACGCACTTCTATTCGATAGTTTCTCTTCAATTTTCTTCATTCTTACATCCGTCCTTAGTGATTTAGTATTCATGTTCATGCTTGACTTTACTTGTTCGAAGATTTCTGGAGTTTTAACCTGAAGTAGTCAAAATCAATCGATTTTTCCTTTGGATCATGTGTTTTTCTTTTAGAGATTTGACTTGGAATTCCGGCTGGAAGTCAAATGATGTTGTTTTTCATAGCGAAGCAACAATTGACTGTGTCGTAATGTTGATAATTGAATATTCTTGTTATAAAATTTTCTGGAGCTCCTTCTCGAAATAATCAAAATCGATCGATTTTTGTTTGTTCTTCGCACCTTATGTTTCGTTTTCTTAAATTGACTTGGAATTCCGAGCTGGAAATAATTGTAGGATGTGGTGCATGTTTCATAAACAAACAACAAACTGTTACGTCCTATGTCCATCTGCTCAAAGTTTTAATTTAACATATCAATTTCTAATACTTTGATTCTGTTGGAAACAAAAAAAANCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTACGCACTTCTATTCGATAGTTTCTCTTCAATTTTCTTCATTCTTACATCCGTCCTTAGTGATTTAGTATTCATGTTCATGCTTGACTTTACTTGTTCGAAGATTTCTGGAGTTTTAACCTGAAGTAGTCAAAATCAATCGATTTTTCCTTTGGATCATGTGTTTTTCTTTTAGAGATTTGACTTGGAATTCCGGCTGGAAGTCAAATGATGTTGTTTTTCATAGCGAAGCAACAATTGACTGTGTCGTAATGTTGATAATTGAATATTCTTGTTATAAAATTTTCTGGAGCTCCTTCTCGAAATAATCAAAATCGATCGATTTTTGTTTGTTCTTCGCACCTTATGTTTCGTTTTCTTAAATTGACTTGGAATTCCGAGCAGGAAATAATTGTAGGATGTGGTGCATGTTTCATAAACAAACAACAAACTGTTACGTCCTATGTCCATCTGCTCAAAGTTTTAATTTAACATATCAATTTCTAATACTTTGATTCTGTTGGAAACAAAAAAAATGATCATAGTTTTTATATGTTTATTTTTTTCTCTTGGGCAAAAATCCCCAAATGTATGTTCTCCAAATCAGACTATTGTAAATTAAAGTCTGACAGGTATCAACAAATGTGCACGAGAAACTTATGAATGTAATGTCGAGGAAGATCTTTTGTGATTTCTTCAGAGCAATATGAGATGACCAAAAGTTGAAGGATGGAGAATTAGTTTAGATTTTTTATGTTTCATGCACTAAGTTCAGAGTTTGTTTAGTATGGTAAATTCTTGTTCTGGATTACTAATTTTGATCCTAAGAGTTGTCAAAGGAATAAGCACCCTTCTGAGCATATCCTGATGTTTCATCATATCATTTATTTTTACCGTAACCATGATTCGTAAAGCGTAGGAGCGCCCGTGTGGCTTAGTGGAACTGGTATGACTTCAGTGTTATGCTGTTTACTGTGTGTAACTTGTTTGTGCAGGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGGACTGGTGGAATTTGTGGGTATGTCCTCTGTCTTCTTAATGTATGTCATTACATGTCAGTTTCATGCATGTTTTTGTCTTCTTGA

mRNA sequence

ATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGGACTGGTGGAATTTGTGGGTATGTCCTCTGTCTTCTTAATGTATGTCATTACATGTCAGTTTCATGCATGTTTTTGTCTTCTTGA

Coding sequence (CDS)

ATGGCAAACCAAGGAGCAAAGAAGCGCAAGGAAGAGAACGCTCGTCATATGGCGAATCTCCGTCGTCTCATCATAGCCTGTAACGTTATCTATATCTTGGTTCGAATGCTGATTTTTCATTCAAGTTTCACTTGGAAACACTGGGTTGGTCTGATTGTCACATCCGCAGCTTATTTTATTCCTTACAACCAACTTGCCAAAATGGCAGACCCAACATATGGTGATGACGGTGAACTTCTAGATGGTGGGTTTGATATGAGGACTGGTGGAATTTGTGGGTATGTCCTCTGTCTTCTTAATGTATGTCATTACATGTCAGTTTCATGCATGTTTTTGTCTTCTTGA

Protein sequence

MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFIPYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSVSCMFLSS

Homology

[Close]

BLAST of Cp4.1LG00g04460 vs. Swiss-Prot
Match: TM208_DICDI (Transmembrane protein 208 homolog OS=Dictyostelium discoideum GN=tmem208 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-10
Identity = 38/118 (32.20%), Postives = 61/118 (51.69%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MAN GAKKRK +N + +  +R ++ A  + YIL R++    +F    W   +  +A    
Sbjct: 1   MANSGAKKRKTQNEKELFKVRLIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNMF 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICG------YVLCLLNVCHYMSVSCMFL 113
            Y  +  M   TY ++GEL+DGG D+  GG+        YV C++     +S  C++L
Sbjct: 61  AYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYL 118

[Close]

BLAST of Cp4.1LG00g04460 vs. Swiss-Prot
Match: TM208_DANRE (Transmembrane protein 208 OS=Danio rerio GN=tmem208 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 1  MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
          +  +G K+  EEN   +    R+I+  N IYI V +L+F++S ++  W  L+   A Y  
Sbjct: 7  VGTKGKKQIHEENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVG 66

Query: 61 PYNQLAKMADPTYGDDGELLDGGFDM 87
           Y  ++ MA P + +DG LLDGG D+
Sbjct: 67 SYRSMSAMAKPAFAEDGSLLDGGIDL 92

[Close]

BLAST of Cp4.1LG00g04460 vs. Swiss-Prot
Match: TM208_BOVIN (Transmembrane protein 208 OS=Bos taurus GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1


Query: 1  MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
          +  +G K+  EEN   +    R+I+  N IY LV +++F+SS ++  W+ L+ + A Y  
Sbjct: 7  VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66

Query: 61 PYNQLAKMADPTYGDDGELLDGGFDM 87
           Y+ ++ MA   + +DG L+DGG D+
Sbjct: 67 SYHSMSSMARAAFSEDGALVDGGMDL 92

[Close]

BLAST of Cp4.1LG00g04460 vs. Swiss-Prot
Match: TM208_CHICK (Transmembrane protein 208 OS=Gallus gallus GN=TMEM208 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07
Identity = 26/83 (31.33%), Postives = 45/83 (54.22%), Query Frame = 1


Query: 4  QGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFIPYN 63
          +G K+  EEN   +    R+I+  + +Y  V +++F+ + +   W+    +SA Y   Y 
Sbjct: 10 KGKKQIFEENRETLRFYLRIILGASAVYAAVNLVVFYPAASAWTWLAFAFSSAVYGASYR 69

Query: 64 QLAKMADPTYGDDGELLDGGFDM 87
           ++ MA P + DDG L DGG D+
Sbjct: 70 SMSSMARPAFADDGSLADGGIDL 92

[Close]

BLAST of Cp4.1LG00g04460 vs. TrEMBL
Match: A0A0A0LH45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036710 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.2e-44
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PYNQL KMA P YGDDGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQI 107

[Close]

BLAST of Cp4.1LG00g04460 vs. TrEMBL
Match: A0A061GWQ7_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_038477 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-41
Identity = 82/107 (76.64%), Postives = 96/107 (89.72%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRR+IIACNVI++LVRMLIFHSSFTWKHWVGL++TSAAYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRIIIACNVIFVLVRMLIFHSSFTWKHWVGLVLTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY QLA+MA PTY +DGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYQQLAQMAKPTYANDGELLDGGFDMSTGGICGYLHDVIYITSFVQL 107

[Close]

BLAST of Cp4.1LG00g04460 vs. TrEMBL
Match: A0A0B0MUJ2_GOSAR (Transmembrane protein OS=Gossypium arboreum GN=F383_26599 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-40
Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNV+Y+LVRMLIFHSSFTWKHWVGL++T+ AYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRLIIACNVVYVLVRMLIFHSSFTWKHWVGLLLTTVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY QL++MA P Y DDGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYQQLSQMAKPAYSDDGELLDGGFDMSTGGICGYLHDVIYITSFVQL 107

[Close]

BLAST of Cp4.1LG00g04460 vs. TrEMBL
Match: A0A0D2R2D2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G106100 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.2e-40
Identity = 80/107 (74.77%), Postives = 93/107 (86.92%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLR LIIACNV+Y+LVRMLIFHSSFTWKHWVGL++TS AYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRHLIIACNVVYVLVRMLIFHSSFTWKHWVGLLLTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY QL++MA P Y DDGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYQQLSQMAKPAYSDDGELLDGGFDMSTGGICGYLHDVIYITSFVQL 107

[Close]

BLAST of Cp4.1LG00g04460 vs. TrEMBL
Match: A0A067L3V7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04097 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.7e-40
Identity = 79/108 (73.15%), Postives = 94/108 (87.04%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKR+EENARHMA LR LIIACNVIY+LVRMLIFH+SFTWKHWVGL++TS AYF+
Sbjct: 1   MANQGAKKRREENARHMAKLRHLIIACNVIYVLVRMLIFHASFTWKHWVGLVLTSLAYFL 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSVS 109
           PY QLA MA P YGDDG+LLDGGFDM TGGICGY+  ++ +  ++ ++
Sbjct: 61  PYQQLAAMAKPAYGDDGDLLDGGFDMSTGGICGYLHDVIYITSFVQIT 108

[Close]

BLAST of Cp4.1LG00g04460 vs. TAIR10
Match: AT2G23940.1 (AT2G23940.1 Protein of unknown function (DUF788))

HSP 1 Score: 153.3 bits (386), Expect = 9.0e-38
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 1  MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
          MANQGAKKRKEENA+HMA LRR+IIA N +Y +VRMLIF+SSFTWKHW+GL++TS AY  
Sbjct: 1  MANQGAKKRKEENAKHMAKLRRIIIASNAVYFVVRMLIFYSSFTWKHWIGLVITSLAYAF 60

Query: 61 PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYV 96
          PY QL +MA P+  DDGEL+DGGFDM TGGICGY+
Sbjct: 61 PYKQLDQMAKPSVTDDGELIDGGFDMTTGGICGYL 95

[Close]

BLAST of Cp4.1LG00g04460 vs. TAIR10
Match: AT4G30500.1 (AT4G30500.1 Protein of unknown function (DUF788))

HSP 1 Score: 136.7 bits (343), Expect = 8.8e-33
Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRK+ENARHMA LR ++I CN++Y+LVR++I HSS TWK+W+GL++TS  Y I
Sbjct: 1   MANQGAKKRKDENARHMAKLRLIMILCNILYVLVRVIISHSSHTWKNWIGLVLTSLGYGI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY  L +MA P+  D GELLDGGFDM T G+CGY+  +L +  ++ V
Sbjct: 61  PYKLLHQMAKPSVSDAGELLDGGFDMSTPGMCGYLHDVLYITCFVQV 107

[Close]

BLAST of Cp4.1LG00g04460 vs. NCBI nr
Match: gi|449453938|ref|XP_004144713.1| (PREDICTED: transmembrane protein 208 homolog [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLI TSAAYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIFTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PYNQL KMA P YGDDGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYNQLEKMAQPIYGDDGELLDGGFDMSTGGICGYMHDVIYITSFVQI 107

[Close]

BLAST of Cp4.1LG00g04460 vs. NCBI nr
Match: gi|659069921|ref|XP_008452429.1| (PREDICTED: transmembrane protein 208 homolog [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHW+GLIVTS AYFI
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWIGLIVTSVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PYNQL KMA PTYGDDGELLDGGFDM T GICGY+  ++ +  ++ +
Sbjct: 61  PYNQLEKMAKPTYGDDGELLDGGFDMSTDGICGYMHDVIYITSFVQI 107

[Close]

BLAST of Cp4.1LG00g04460 vs. NCBI nr
Match: gi|1009109675|ref|XP_015891442.1| (PREDICTED: transmembrane protein 208 [Ziziphus jujuba])

HSP 1 Score: 177.9 bits (450), Expect = 9.7e-42
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEENARHMANLRRLIIACNVIY+LVRMLIFHSSFTWKHW+GLIVTS AY I
Sbjct: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYVLVRMLIFHSSFTWKHWIGLIVTSVAYAI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSVS 109
           PY QLA+MA P Y DDGEL+DGGFDM TGG+CGY+  ++ +  ++ VS
Sbjct: 61  PYQQLAQMAKPAYADDGELIDGGFDMTTGGVCGYLHDVIYITSFVQVS 108

[Close]

BLAST of Cp4.1LG00g04460 vs. NCBI nr
Match: gi|590579950|ref|XP_007013930.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 176.0 bits (445), Expect = 3.7e-41
Identity = 82/107 (76.64%), Postives = 96/107 (89.72%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRR+IIACNVI++LVRMLIFHSSFTWKHWVGL++TSAAYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRIIIACNVIFVLVRMLIFHSSFTWKHWVGLVLTSAAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY QLA+MA PTY +DGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYQQLAQMAKPTYANDGELLDGGFDMSTGGICGYLHDVIYITSFVQL 107

[Close]

BLAST of Cp4.1LG00g04460 vs. NCBI nr
Match: gi|728819381|gb|KHG03164.1| (Transmembrane protein [Gossypium arboreum])

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-40
Identity = 80/107 (74.77%), Postives = 94/107 (87.85%), Query Frame = 1


Query: 1   MANQGAKKRKEENARHMANLRRLIIACNVIYILVRMLIFHSSFTWKHWVGLIVTSAAYFI 60
           MANQGAKKRKEEN RHMANLRRLIIACNV+Y+LVRMLIFHSSFTWKHWVGL++T+ AYFI
Sbjct: 1   MANQGAKKRKEENTRHMANLRRLIIACNVVYVLVRMLIFHSSFTWKHWVGLLLTTVAYFI 60

Query: 61  PYNQLAKMADPTYGDDGELLDGGFDMRTGGICGYVLCLLNVCHYMSV 108
           PY QL++MA P Y DDGELLDGGFDM TGGICGY+  ++ +  ++ +
Sbjct: 61  PYQQLSQMAKPAYSDDGELLDGGFDMSTGGICGYLHDVIYITSFVQL 107

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g04460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TM208_DICDI	7.5e-10	32.20	Transmembrane protein 208 homolog OS=Dictyostelium discoideum GN=tmem208 PE=3 SV...	[more]
TM208_DANRE	2.2e-09	36.05	Transmembrane protein 208 OS=Danio rerio GN=tmem208 PE=2 SV=1	[more]
TM208_BOVIN	1.4e-08	33.72	Transmembrane protein 208 OS=Bos taurus GN=TMEM208 PE=2 SV=1	[more]
TM208_CHICK	5.9e-07	31.33	Transmembrane protein 208 OS=Gallus gallus GN=TMEM208 PE=2 SV=1	[more]

BLAST of Cp4.1LG00g04460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH45_CUCSA	7.2e-44	82.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036710 PE=4 SV=1	[more]
A0A061GWQ7_THECC	2.6e-41	76.64	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_038477 PE=4 SV=1	[more]
A0A0B0MUJ2_GOSAR	1.3e-40	74.77	Transmembrane protein OS=Gossypium arboreum GN=F383_26599 PE=4 SV=1	[more]
A0A0D2R2D2_GOSRA	2.2e-40	74.77	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G106100 PE=4 SV=1	[more]
A0A067L3V7_JATCU	3.7e-40	73.15	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04097 PE=4 SV=1	[more]

BLAST of Cp4.1LG00g04460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G23940.1	9.0e-38	73.68	Protein of unknown function (DUF788)	[more]
AT4G30500.1	8.8e-33	59.81	Protein of unknown function (DUF788)	[more]

BLAST of Cp4.1LG00g04460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453938\|ref\|XP_004144713.1\|	1.0e-43	82.24	PREDICTED: transmembrane protein 208 homolog [Cucumis sativus]	[more]
gi\|659069921\|ref\|XP_008452429.1\|	1.4e-43	82.24	PREDICTED: transmembrane protein 208 homolog [Cucumis melo]	[more]
gi\|1009109675\|ref\|XP_015891442.1\|	9.7e-42	77.78	PREDICTED: transmembrane protein 208 [Ziziphus jujuba]	[more]
gi\|590579950\|ref\|XP_007013930.1\|	3.7e-41	76.64	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|728819381\|gb\|KHG03164.1\|	1.8e-40	74.77	Transmembrane protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008506	SND2/TMEM208

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g04460.1	Cp4.1LG00g04460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008506	Protein of unknown function DUF788, TMEM208	PANTHER	PTHR13505	FAMILY NOT NAMED	coord: 1..95 score: 7.4
IPR008506	Protein of unknown function DUF788, TMEM208	PFAM	PF05620	DUF788	coord: 1..112 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g04460	Csa2G036710	Cucumber (Chinese Long) v2	cpecuB008
Cp4.1LG00g04460	CSPI02G05420	Wild cucumber (PI 183967)	cpecpiB006
Cp4.1LG00g04460	Lsi11G007070	Bottle gourd (USVL1VR-Ls)	cpelsiB005
Cp4.1LG00g04460	CsaV3_2G007780	Cucumber (Chinese Long) v3	cpecucB0009
Cp4.1LG00g04460	Bhi06G001195	Wax gourd	cpewgoB0008
Cp4.1LG00g04460	Carg11953	Silver-seed gourd	carcpeB0799

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG00g04460	Cucurbita pepo (Zucchini)	cpecpeB010
Cp4.1LG00g04460	Cucurbita maxima (Rimu)	cmacpeB456
Cp4.1LG00g04460	Cucurbita moschata (Rifu)	cmocpeB417
Cp4.1LG00g04460	Silver-seed gourd	carcpeB0731