Carg11514 (gene) Silver-seed gourd

Overview
NameCarg11514
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_083 : 365152 .. 365890 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGGTAGGGTTGAAGTTGAACTGTGCCCTTTGAAGAGTTCCCGATTTCTTTGTTTCCTTTTCTGCTCTGGAATTCGATCTATGCAGCAAATTTTCCACCCAAATTTCTCTACTTTCTATCTCCGAATTGAATTTCCGTTTCCAAAATCGATTACGAAGGGGCACAAACGGCGGAGTTGGGGATTTGAGATAGTGAGAAGACTCGGTTAGCGGATTTGGGAGTCGAATCTTTTCAACTTCTTGTGTCTCCTGCTCCTTCAGGTTTGAACCCTAATTTTCTCGTTGAAGCTGGAAGGTATTCTTATGGATTTTCTGGTATTTGTTTCTTCTGTTGCTTCCTTTTGGTTCGGTTACTTGTTTAATCTATGTTGATTTCCTGATACGATTGAAGTATTGTTTCTTCTGATCGTTGACTTCGTTTTTCCTCCTTTTTTGTTGGGGATTCTTGGATTGAGCGTGTCAGAATGTTAGACCTTTTTATCTTTACTGAAATAAGCTATTTTCGTCGTAATCTTGCTTTGGTTTGTGTCTCTTTTTCGAAGTCTACTGATGATTTGGCCATCGACAGTGGCTTTATCTTAATGTTTGATTCCAGTCGTGCTAGAATGGGTCTGTTGAAATTTGCTATATTCCAGGTATGAACAGCTCTGTTTCTTCCAGTCGTGCTACCTCTTCGAGTTGCAGTTGCATTGGATTGTCGGAACTACAAGACATATTCATAGTAGGAGGGGTTTGA

mRNA sequence

ATGTGGGGTAGGGTTGAAGTTGAACTGTGCCCTTTGAAGAGTTCCCGATTTCTTTGTTTCCTTTTCTGCTCTGGAATTCGATCTATGCAGCAAATTTTCCACCCAAATTTCTCTACTTTCTATCTCCGAATTGAATTTCCGTTTCCAAAATCGATTACGAAGGGGCACAAACGGCGGAGTTGGGGATTTGAGATAGTGAGAAGACTCGGTATGAACAGCTCTGTTTCTTCCAGTCGTGCTACCTCTTCGAGTTGCAGTTGCATTGGATTGTCGGAACTACAAGACATATTCATAGTAGGAGGGGTTTGA

Coding sequence (CDS)

ATGTGGGGTAGGGTTGAAGTTGAACTGTGCCCTTTGAAGAGTTCCCGATTTCTTTGTTTCCTTTTCTGCTCTGGAATTCGATCTATGCAGCAAATTTTCCACCCAAATTTCTCTACTTTCTATCTCCGAATTGAATTTCCGTTTCCAAAATCGATTACGAAGGGGCACAAACGGCGGAGTTGGGGATTTGAGATAGTGAGAAGACTCGGTATGAACAGCTCTGTTTCTTCCAGTCGTGCTACCTCTTCGAGTTGCAGTTGCATTGGATTGTCGGAACTACAAGACATATTCATAGTAGGAGGGGTTTGA

Protein sequence

MWGRVEVELCPLKSSRFLCFLFCSGIRSMQQIFHPNFSTFYLRIEFPFPKSITKGHKRRSWGFEIVRRLGMNSSVSSSRATSSSCSCIGLSELQDIFIVGGV
Homology
[Close]
BLAST of Carg11514 vs. NCBI nr
Match: KGN44725.1 (hypothetical protein Csa_7G374680 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-11
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 29 MQQIFHPNFSTFYLRIEFPFPKSITKGHKRRSWGFEIVRRLGMNSSVSSSRATSSSCSCI 88
          M  + H NFSTFY  I FPF  S+ K  +RR WGF +VRRLGMN SVS+S  TSSSCS I
Sbjct: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60

Query: 89 GL 91
          GL
Sbjct: 61 GL 62

[Close]
BLAST of Carg11514 vs. TrEMBL
Match: tr|A0A0A0K4T3|A0A0A0K4T3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374680 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-11
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 29 MQQIFHPNFSTFYLRIEFPFPKSITKGHKRRSWGFEIVRRLGMNSSVSSSRATSSSCSCI 88
          M  + H NFSTFY  I FPF  S+ K  +RR WGF +VRRLGMN SVS+S  TSSSCS I
Sbjct: 1  MLHVSHQNFSTFYHPIGFPFLNSVPKRLRRRIWGFHLVRRLGMNGSVSTSCTTSSSCSFI 60

Query: 89 GL 91
          GL
Sbjct: 61 GL 62

The following BLAST results are available for this feature:
BLAST of Carg11514 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44725.15.3e-1162.90hypothetical protein Csa_7G374680 [Cucumis sativus][more]
BLAST of Carg11514 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg11514 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg11514 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K4T3|A0A0A0K4T3_CUCSA3.5e-1162.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374680 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11514-RACarg11514-RAmRNA