Carg11131 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11131
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
Location	Cucurbita_argyrosperma_scaffold_013 : 78058 .. 81581 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCAGACGATGGCGTCAGGGTGGGGAATAACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTACTCTACTCCGTGAAGATTATCTCGAGTGCCTCCACCATTCCAAGGAGGTCAGACCTTCCATTTCCCCTTGCTTTCTTGCATCTATTTCAATTTTCTTCCTATTTCTTATGTATAAGTTAGATTGATTGCCTGAATTGGGATTAGATATGTGGTTCCTTGTTCATTAGAGCTTTTGATGCCTAATTTGATCTCGGCTCATGTTTTCAACGTCGCATCCGAAGTCGGTTGCGTGAGATTTGGATTAGGTCTGTTTATATATGCAACTTGTTGATTGACAAAATTTCTGGAGAAATTTGAATTTATGAATACTTGGAATTTTGTGGCTTTTGATGATAGTGATTGATTAGGGAAAGGTCATGTCATGTCGAAGAAGAAATAAGGTTTTGTGGCTTCTGTTTCCAGTTCCACATAGTTTTTCCATATTTTGATGAACTTTTTAGATTTCTTATCAACAAGAAAGAATGTTTTAGAGAAGCATGGTGGAGACCTCAGTCTCAACCTATTACATATTGAGTTTTGTGTATAATGAGGGAGAGGGACAGGTCAACTTTATTGTTTCAAGCGAGCAGCTTGCCATACATAGCTTGTGATATAATATGTTTAGGCAAATCCAAGCATAGTTCAATGTATAAGATACCAATTAACATCCCAAAGATAGTTTGATCCCCCACTTTTAATGGTTTGAACTAAAAAAAGAAAAGTTATATTTTGTTTAGGTGTTTCTGCTGAAACACAATTGTGTGATTTTATGTTTCTGAACATTCATCTTCCCTATGAAGATATGGATCTATATACACTTACTCTAACAACATTGAGTTTTGCCTTCTAAGTTTAATGTGAAGAGTTTGTTTTATTCTAAAAATAAATAAATAAATAAAATAAAAACGGAAGTGGGATATGTTTATGGTAAGCTGAATATATAGATGCTTGATCGTTAAAAGTAAGCTTCTATGCTGTAGGAGTCAACGGGCATTCTTTCTATGAGCATTTTAATAAGTAAACTGGTAGTCTCAACATATCAAGCTTTGCAACTACAGTGTTTCAATATTATCATCTTGGTGATGAAATCCTCCTCCCGAATCTCATTTTCATAAGTTGTTCTCTGATGCTCTGCCGATTTTCAACGGTTGATTTTTAGCTATTGGGGGCATTTGGATCTCTTTCCACGTCCTAAATTTCCATTTTCTTTTGTTATATCTTTGATAGATCCTTTCTTTCAATGTTCACGTTGTCACCATCAGCTTTGCATATGTGAAAATCTAAATAAACCTCAGCTAAATTTGTTAGTTTTTATGGGTCTAAATATGTGCAAATCTCTAATATTTGATTGTTTCTTCAATTCAATCTATTATGTTTTTTTCAGTTATGTCCTTTACATCGGTAAATGTTAGAATTGACTTATGATAAGTTTAGATTGTATGATATTTGGTGAGTTGACAAAAATTTAAATTTAGAAAAGGAATTACGGCATTTAAGTAAGGAAATTTTCTAACTTGACCTCCATATTTTTAAGAAGTTGGTAAAAATTTTGACATTTGCATAGTTTCCATTTTAAATTTTTGCCAACTCTCTAAATATCATATCATGAAAACTTATCATCAGTAAATTTTAACATTTATGGATGAGAATGATATAATTGAAAAATATTAAATCAAAAGGAACTAAGTTGAGACTAAATTATTGAAAAATGCATAAACACTAGGGTAGTTGTTTAAATTTGTCTTCGTTGTTATTTCTAAATGATTACGCCTTATGCATGTGACTTCTGGAAAGCACATGCAACTATGGATTGTTTTGGTTTACAAGAATAGCATTCAACTTGCCGTCTCTTGTTGGTAATGACACGCCCTATTAATTTGGCACCGATCATTTGAATTTGAGAACTCCCGTTGCTTAATATCTCCGTGTTTGGTATCAACCCCTTGACTAGTTTACACCTGTTTTTTCCTTTATTCTTTTTCCTTCTCCAGTAGCTTCTCTCTCGATTGTACTTTAATTTATCTTGACGATAGGTGGATTCTGCTAAAATTGACTTTATTTTTATATCCAAACCCACCAAGTAACAAAAATCACAGTGCTAGGTTTTTGTAGGAATATGGTTAACTTTTTTTCACCATACAATCAGATGATCTTTTCTGATTTTTCCTGGGATATGTTTCTCACTTGAGTCAGAAATGAATCTCAATCCAATTACTATTTTTGGTGCCACCTTATATTGTAATGTTTTAATCGTTCCTTGTGTGCGTGTCTTTGAGTGGTGTGGTCTCTGCTTTGCTATTGCTATCACGTCATACAGATAAGTTTGTTATATCACTTGTACGTTCAGTTTGATTGCTCATGTGGAAAAGGGTAGACAGGTGGATTTTTTTTTAATTTAATTAATTTATTTTATTTTTTGCATTCTAAAACCATCATAGGTTGGTTCACTAGTCCCAAGTGCAAGCGGTTATCTTAAATGCATTTGAGGTCTCAATCATGGTTCAAAACTTAAATTATAGCCGCCGTCTACCTAACATTCTAGAAATATTTATCTAGTATCCTGACACAACATAGTACTTGCGATTATTCCATAGAATTAGTCATGCACCACGTCTTTAAAGAAACAAAAATTAAGACTACTGCTGTTTAGAGTGAGTGGAGCTGGTATTTGATTCTTTCAACTACTAATTTGACCTTGACACATAAATTGGTTAGATTATGTTTGTTGTGTTATTCTTGCTGTTGTATTTATTAACATATAAATTAGTTAAATGAATTTGTGGAACAAGATAAAAGCAGTTAAACATGTTTTGATGGTGACTTGAATTCTAATATTTACTAATTGAGTGAGGTATTCAATCATGATGATTCTAGAGGGTATGTTTAAAATCATAGTTTACAGAAATCGAACTTCTAAGCTTATGTACATTTCTTTTGCATCATTTCTTTTTGCAAAATCGTTATATCATTCACTTAAGACAACTCTTCCATTTTTGAATAATGAGGTATATATCTGGACATGGAGCTCAGATTTCTAAGTTGTACCTATCATATTTGTTATTTATCTCTCTACTCAATATGAATATATTAGTGAGTTGATTTATGGAAGGCTCTTAAGAATTACTTTTTTAGGCTTGATAAGAGAATGGTTTCATTGTTAACGAATAGGAACACATGGATAAAAAATGATTCTGCCCGCTTTGCAAGAATCCGTTCTAATTCCATTTGTTTGTTTGGGCCATACCTTACAGTTCCAAAGAAGAAACCGTGTCTACAAGGAGGAGAAGCGTAAGCTAAGAGCAGCCGAACGGGAGGCCAAAGAGGGTAAACAAGTTGAAGCTGCTCATGCATAGTCATAATCATCGTTCTTCAAAGATTGAATAATGAAGAATGCATGGACATGCGCTGTTATTTGAACAATTTTTGACTTGTT

mRNA sequence

GTTCAGACGATGGCGTCAGGGTGGGGAATAACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTACTCTACTCCGTGAAGATTATCTCGAGTGCCTCCACCATTCCAAGGAGTTCCAAAGAAGAAACCGTGTCTACAAGGAGGAGAAGCGTAAGCTAAGAGCAGCCGAACGGGAGGCCAAAGAGGGTAAACAAGTTGAAGCTGCTCATGCATAGTCATAATCATCGTTCTTCAAAGATTGAATAATGAAGAATGCATGGACATGCGCTGTTATTTGAACAATTTTTGACTTGTT

Coding sequence (CDS)

GTTCAGACGATGGCGTCAGGGTGGGGAATAACCGGGAACAAGGGCCGATGCTACGATTTCTGGATTGATTTCAGCGATTGTATGTCCCGCTGCCGAGAACCAAAGGACTGTACTCTACTCCGTGAAGATTATCTCGAGTGCCTCCACCATTCCAAGGAGTTCCAAAGAAGAAACCGTGTCTACAAGGAGGAGAAGCGTAAGCTAAGAGCAGCCGAACGGGAGGCCAAAGAGGGTAAACAAGTTGAAGCTGCTCATGCATAG

Protein sequence

VQTMASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKEEKRKLRAAEREAKEGKQVEAAHA

Homology

[Close]

BLAST of Carg11131 vs. NCBI nr
Match: XP_022935316.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata] >XP_023526822.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 4.6e-40
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          EKRKLRAAEREAKEGKQVEAAHA
Sbjct: 61 EKRKLRAAEREAKEGKQVEAAHA 83

[Close]

BLAST of Carg11131 vs. NCBI nr
Match: XP_022984079.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima])

HSP 1 Score: 169.1 bits (427), Expect = 6.6e-39
Identity = 81/83 (97.59%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          EKRKLRAAEREAKE KQVEA HA
Sbjct: 61 EKRKLRAAEREAKESKQVEAVHA 83

[Close]

BLAST of Carg11131 vs. NCBI nr
Match: XP_022155272.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 5.6e-38
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RKLRAAEREAKEGK V+AAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Carg11131 vs. NCBI nr
Match: XP_011652934.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucumis sativus] >KGN52808.1 Fiber protein Fb14 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RKLRAAEREAKEGK V+AAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Carg11131 vs. NCBI nr
Match: XP_022948762.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata] >XP_022998534.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 8.1e-37
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHHSKEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCALLREDYLECLHHSKEFQRRNRVYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RKLRAA+ EAKEGK V+AAHA
Sbjct: 61 EQRKLRAAKGEAKEGKHVDAAHA 83

[Close]

BLAST of Carg11131 vs. TAIR10
Match: AT2G47690.1 (NADH-ubiquinone oxidoreductase-related)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-35
Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 2   QTMASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVY 61
           + MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNR+Y
Sbjct: 34  EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIY 93

Query: 62  KEEKRKLRAAEREAKE 78
           KEE+RKLRAA R+ +E
Sbjct: 94  KEEQRKLRAASRKGEE 109

[Close]

BLAST of Carg11131 vs. TAIR10
Match: AT3G62790.1 (NADH-ubiquinone oxidoreductase-related)

HSP 1 Score: 144.4 bits (363), Expect = 3.2e-35
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKE 78
          E+RKLRAA R+ +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]

BLAST of Carg11131 vs. Swiss-Prot
Match: sp|O82238|NDS5A_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana OX=3702 GN=At2g47690 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.3e-34
Identity = 65/76 (85.53%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 2   QTMASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVY 61
           + MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNR+Y
Sbjct: 34  EEMASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIY 93

Query: 62  KEEKRKLRAAEREAKE 78
           KEE+RKLRAA R+ +E
Sbjct: 94  KEEQRKLRAASRKGEE 109

[Close]

BLAST of Carg11131 vs. Swiss-Prot
Match: sp|Q9LZI6|NDS5B_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana OX=3702 GN=At3g62790 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.7e-34
Identity = 65/74 (87.84%), Postives = 71/74 (95.95%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFW+DFS+CMS CREPKDCTLLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKE 78
          E+RKLRAA R+ +E
Sbjct: 61 EQRKLRAASRKGEE 74

[Close]

BLAST of Carg11131 vs. TrEMBL
Match: tr|A0A0A0KTA7|A0A0A0KTA7_CUCSA (Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-37
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH KEFQRRNRVYKE
Sbjct: 1  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHFKEFQRRNRVYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RKLRAAEREAKEGK V+AAHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDAAHA 83

[Close]

BLAST of Carg11131 vs. TrEMBL
Match: tr|A0A1S3BZL7|A0A1S3BZL7_CUCME (NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Cucumis melo OX=3656 GN=LOC103494774 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-36
Identity = 74/83 (89.16%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGI G+KGRCYDFWIDFSDCMSRCREPKDC+LLREDYLECLHH+KEFQRRNR+YKE
Sbjct: 1  MASGWGIDGSKGRCYDFWIDFSDCMSRCREPKDCSLLREDYLECLHHTKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RKLRAAEREAKEGK V+ AHA
Sbjct: 61 EQRKLRAAEREAKEGKHVDTAHA 83

[Close]

BLAST of Carg11131 vs. TrEMBL
Match: tr|A0A2P5C2N6|A0A2P5C2N6_9ROSA (NADH:ubiquinone oxidoreductase, iron-sulfur subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_299860 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.4e-34
Identity = 69/83 (83.13%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFW+DFS+CMS+CREPKDC+LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWVDFSECMSKCREPKDCSLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RK+RAA R+ KEG  VE  HA
Sbjct: 61 EQRKIRAAARKTKEGADVEHHHA 83

[Close]

BLAST of Carg11131 vs. TrEMBL
Match: tr|A0A2P5CY20|A0A2P5CY20_PARAD (NADH:ubiquinone oxidoreductase, iron-sulfur subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_114060 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.4e-34
Identity = 69/83 (83.13%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 4  MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVYKE 63
          MASGWGITGNKGRCYDFW+DFS+CMS+CREPKDC+LLREDYLECLHHSKEFQRRNR+YKE
Sbjct: 1  MASGWGITGNKGRCYDFWVDFSECMSKCREPKDCSLLREDYLECLHHSKEFQRRNRIYKE 60

Query: 64 EKRKLRAAEREAKEGKQVEAAHA 87
          E+RK+RAA R+ KEG  VE  HA
Sbjct: 61 EQRKIRAAARKTKEGADVEHHHA 83

[Close]

BLAST of Carg11131 vs. TrEMBL
Match: tr|A0A2G5F069|A0A2G5F069_AQUCA (Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_00300724v1 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.1e-33
Identity = 67/77 (87.01%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 2   QTMASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCTLLREDYLECLHHSKEFQRRNRVY 61
           Q+MASGWGITGNKGRCYDFWIDFSDCMSRCREPKDC LLREDYLECLHH+KE+QRRNR+Y
Sbjct: 27  QSMASGWGITGNKGRCYDFWIDFSDCMSRCREPKDCVLLREDYLECLHHAKEYQRRNRIY 86

Query: 62  KEEKRKLRAAEREAKEG 79
           KEE+R++RAA R+AKEG
Sbjct: 87  KEEQRQIRAAARKAKEG 103

The following BLAST results are available for this feature:

BLAST of Carg11131 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935316.1	4.6e-40	100.00	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata...	[more]
XP_022984079.1	6.6e-39	97.59	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita maxima]	[more]
XP_022155272.1	5.6e-38	93.98	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Momordica charanti...	[more]
XP_011652934.1	1.6e-37	93.98	PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucumis...	[more]
XP_022948762.1	8.1e-37	92.77	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Cucurbita moschata...	[more]

BLAST of Carg11131 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47690.1	1.9e-35	85.53	NADH-ubiquinone oxidoreductase-related	[more]
AT3G62790.1	3.2e-35	87.84	NADH-ubiquinone oxidoreductase-related	[more]

BLAST of Carg11131 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82238\|NDS5A_ARATH	3.3e-34	85.53	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A OS=Arabidopsis thaliana ...	[more]
sp\|Q9LZI6\|NDS5B_ARATH	5.7e-34	87.84	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana ...	[more]

BLAST of Carg11131 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KTA7\|A0A0A0KTA7_CUCSA	1.1e-37	93.98	Fiber protein Fb14 OS=Cucumis sativus OX=3659 GN=Csa_4G001750 PE=4 SV=1	[more]
tr\|A0A1S3BZL7\|A0A1S3BZL7_CUCME	3.5e-36	89.16	NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A2P5C2N6\|A0A2P5C2N6_9ROSA	9.4e-34	83.13	NADH:ubiquinone oxidoreductase, iron-sulfur subunit OS=Trema orientalis OX=63057...	[more]
tr\|A0A2P5CY20\|A0A2P5CY20_PARAD	9.4e-34	83.13	NADH:ubiquinone oxidoreductase, iron-sulfur subunit OS=Parasponia andersonii OX=...	[more]
tr\|A0A2G5F069\|A0A2G5F069_AQUCA	2.1e-33	87.01	Uncharacterized protein (Fragment) OS=Aquilegia coerulea OX=218851 GN=AQUCO_0030...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019342	NADH_UbQ_OxRdtase_FeS-su5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11131-RA	Carg11131-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 51..81
None	No IPR available	PANTHER	PTHR15224	FAMILY NOT NAMED	coord: 2..82
None	No IPR available	PROSITE	PS51808	CHCH	coord: 14..55 score: 11.3
IPR019342	NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5	PFAM	PF10200	Ndufs5	coord: 14..67 e-value: 3.6E-6 score: 27.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11131	Cla017414	Watermelon (97103) v1	carwmB0816
Carg11131	Csa4G001750	Cucumber (Chinese Long) v2	carcuB0832
Carg11131	MELO3C017960	Melon (DHL92) v3.5.1	carmeB0813
Carg11131	ClCG10G010880	Watermelon (Charleston Gray)	carwcgB0792
Carg11131	CSPI04G00800	Wild cucumber (PI 183967)	carcpiB0854
Carg11131	Cucsa.097150	Cucumber (Gy14) v1	carcgyB0927
Carg11131	CmaCh01G003140	Cucurbita maxima (Rimu)	carcmaB1134
Carg11131	CmaCh14G008990	Cucurbita maxima (Rimu)	carcmaB1132
Carg11131	CmoCh01G003280	Cucurbita moschata (Rifu)	carcmoB1105
Carg11131	CmoCh14G009280	Cucurbita moschata (Rifu)	carcmoB1102
Carg11131	Lsi03G010700	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11131	Cp4.1LG02g16280	Cucurbita pepo (Zucchini)	carcpeB1146
Carg11131	Cp4.1LG03g05300	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11131	CsGy4G000700	Cucumber (Gy14) v2	carcgybB0806
Carg11131	MELO3C017960.2	Melon (DHL92) v3.6.1	carmedB0824
Carg11131	CsaV3_4G000760	Cucumber (Chinese Long) v3	carcucB0857
Carg11131	Cla97C10G193790	Watermelon (97103) v2	carwmbB0851
Carg11131	Bhi11G001003	Wax gourd	carwgoB0951

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11131	Carg07406	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11131	Silver-seed gourd	carcarB133
Carg11131	Cucumber (Gy14) v2	carcgybB0807
Carg11131	Cucumber (Gy14) v1	carcgyB0932
Carg11131	Cucurbita maxima (Rimu)	carcmaB1133
Carg11131	Cucurbita moschata (Rifu)	carcmoB1103
Carg11131	Cucurbita pepo (Zucchini)	carcpeB1143
Carg11131	Wild cucumber (PI 183967)	carcpiB0855
Carg11131	Cucumber (Chinese Long) v3	carcucB0858
Carg11131	Wax gourd	carwgoB0953