Carg10000 (gene) Silver-seed gourd

Overview
NameCarg10000
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRibosomal RNA small subunit methyltransferase G
LocationCucurbita_argyrosperma_scaffold_030 : 910523 .. 912406 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAAGAAAGGAAAGGAAAGGAAAGCGAAGATGATGGATTTCGAGATGTCTTCTAATGTCCTCCAACCAAACCCACCTCTCACAAACATCTTCATCACTGTCTCTGAAAACAACAATATTTTGCACCGAGTTATGTGGGCTTTTTTGGGTTTTAGTTGGCTCGGTCAGAGCTTCACAGAGAAAACAGGAAACCAGGAACCTTCACCCACCCCCCACCCCCTTCCTTCTCTTCCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGTAATTTTCTTTTGCAGCTTCTACGGATTTGGGGTTTGTTTTTTTCTCTCGTGATTCTATCAGATCTGGCTTTCTTTTGATGAATGTTTGAATATTTTTTTCAGATCTTCTCATATATTGATTTCATGTGAGATTTGGGTTGTTTCTTTTTTCATACAATTTCTGGTTTGGAAGAGGAAAAGATGGTTTTGATCTATTAGCTCTCAATCATGGAAACTTGTTTTTTTCTTTTCTTTGGGCTAAGATAATTCTTCCGAGTTCTTTTTATGGATTGTTTGTTGAAATTTGAAATACCCATCTTAGATCATCCTTCTCCCCCCCAGTTCTGAGTTTGTGACATAGAGATCGGTTTAAGACTCAGGAATGTTATGGATGAACAAACAGTTGAAAGTTTTTGTTTTCCTTCCAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGGTATAATCTTTACGTTATTACATTGTATTTGTACTGATCTTCATCAGGAATTGGTGAATTGTTTAGGCCTAACTATGAGTCTACGTTTATATTGAAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGGTAATTGTCTAAGGGGACTTATTTGGGTACTAATGTTATGATTGCTAAACTCTATCAACCTCCTCTCCCTAACTATTGTTCCTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

mRNA sequence

GAGAGAGAGAGAGATCGCGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCATTCAAATTGTGTGTCGCTCTGTCGATGGCATCCAGGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAGGGAAGAAAGAGTTGGAAAGAAAACCTTCCCAATTCCCTCACCAATTCCCATCCATTTCTCTATTCTCTTTCTTCTCTCCCTCTTTCTTTCCCCATCTAACGTTTTGGTTCTTTACCCATCTGGGTTCTTAATTTCCTTTCTTCATTCCCATCTATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

Coding sequence (CDS)

ATGAAGAAGATGAGAGTGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCACGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTATCAAGAGCAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCGAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTCATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAATCAACAGAATCCGACGCCCGTTTTCGACTTGAATCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGTGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCAGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

Protein sequence

MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV
Homology
[Close]
BLAST of Carg10000 vs. NCBI nr
Match: XP_022921741.1 (uncharacterized protein LOC111429897 [Cucurbita moschata])

HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113
Identity = 244/253 (96.44%), Postives = 245/253 (96.84%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGT+KSKLQMMKQKKMTLIA
Sbjct: 95  MKKM--KGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTVKSKLQMMKQKKMTLIA 154

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHIN 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAIS IN
Sbjct: 155 EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISDIN 214

Query: 121 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANXXXXXXXXXXXXXXXXXXXXDIX 180
           QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKA XXXXXXXXXXXXXXXXXXXXDIX
Sbjct: 215 QKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAXXXXXXXXXXXXXXXXXXXXXDIX 274

Query: 181 XFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGK 240
           X   LNQISIEEEELQTRYEPLSAVELKKSLLRGGNDE QNDIKILACRGIGDGPSRAGK
Sbjct: 275 XXXXLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEPQNDIKILACRGIGDGPSRAGK 334

Query: 241 RKISWQDQVALRV 254
           RKISWQDQVALRV
Sbjct: 335 RKISWQDQVALRV 345

[Close]
BLAST of Carg10000 vs. NCBI nr
Match: XP_023516535.1 (uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400.2 bits (1027), Expect = 5.2e-108
Identity = 233/258 (90.31%), Postives = 235/258 (91.09%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAALSQYPVYEDPKARFKH GLLHDYQVLEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH-----NNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFH     NNKKGKNVARRRPALQPVMA
Sbjct: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMA 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANXXXXXXXXXXXXXXXXXX 180
           IS INQKERIDKGFSVPLQNSTPIPVLDLNQKAKT SRKKA  XXXXXXXXXXXXXX   
Sbjct: 121 ISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQXXXXXXXXXXXXXXMYS 180

Query: 181 XXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
             DI X    NQISIEEEELQTRYEPLSAVELKKSLLRGGNDE+QNDIKILACRGIGDGP
Sbjct: 181 ERDITXXXXXNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIGDGP 240

Query: 241 SRAGKRKISWQDQVALRV 254
           SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 255

[Close]
BLAST of Carg10000 vs. NCBI nr
Match: XP_022988590.1 (uncharacterized protein LOC111485789 [Cucurbita maxima])

HSP 1 Score: 357.8 bits (917), Expect = 3.0e-95
Identity = 212/258 (82.17%), Postives = 221/258 (85.66%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM  KGAAAL QYPVYEDPKARFKH GLLHDYQVLEKETGT+K+KLQMMKQKKMTLIA
Sbjct: 1   MKKM--KGAAALFQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKNKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHN-----NKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLMNNQLST +H+SNGDLMQQK+FHN     NKKGK+ ARRRPALQPVMA
Sbjct: 61  EVRFLRKRYEYLMNNQLSTNDHHSNGDLMQQKEFHNQVANDNKKGKSAARRRPALQPVMA 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANXXXXXXXXXXXXXXXXXX 180
           IS INQKERIDKGFS+PLQNSTPIPVL               XXXXXXXXXXXXXXXX  
Sbjct: 121 ISDINQKERIDKGFSIPLQNSTPIPVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYS 180

Query: 181 XXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGP 240
             DIXX     QISIEEEELQTRYEPLS VELKKSLL+GGNDEQQN+IKILACRGIGDGP
Sbjct: 181 ERDIXXXXXXXQISIEEEELQTRYEPLSVVELKKSLLQGGNDEQQNNIKILACRGIGDGP 240

Query: 241 SRAGKRKISWQDQVALRV 254
           SRAGKRKISWQDQVALRV
Sbjct: 241 SRAGKRKISWQDQVALRV 256

[Close]
BLAST of Carg10000 vs. NCBI nr
Match: XP_008443848.1 (PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 199/263 (75.67%), Postives = 209/263 (79.47%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ      +N KK KN  RRR ALQP+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNXKKVKNGGRRRTALQPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN-----XXXXXXXXXXXXX 180
           IS INQKERID    +P+QNSTPIPVLDLNQKAKTSSRKKAN     XXXXXXXXXXXXX
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
           XXXXXXX  XX      ISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 XXXXXXXXXXXXXXXXXISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Carg10000 vs. NCBI nr
Match: KGN65169.1 (hypothetical protein Csa_1G256780 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 198/263 (75.29%), Postives = 211/263 (80.23%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTL+A
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQF-----HNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSN + +QQKQ+     +NNKKGKN  RRR AL+P+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN-----XXXXXXXXXXXXX 180
           IS INQKERID    +PLQNSTPIPVLDLNQKAKTSSRKKA+     XXXXXXXXXXXXX
Sbjct: 121 ISDINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
           XXXXXXX  XX      ISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 XXXXXXXXXXXXXXXXXISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Carg10000 vs. TAIR10
Match: AT5G57910.1 (unknown protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 80/246 (32.52%), Postives = 112/246 (45.53%), Query Frame = 0 

Query: 18  YEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQL 77
           +EDPK RF+HH L+ DY  L  ET  ++ +LQ ++++K TL+AEVRFLR+RY +L  +Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQ- 75

Query: 78  STKEHYSNGDLMQQKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNST 137
                       + K+   +  GK +          + +S  N+ E   K  S+P     
Sbjct: 76  ----------PQEIKKVRRSNGGKKIR---------VEVSPSNKSEAETKHVSLP----- 135

Query: 138 PIPVLDLNQKAKTSSRKKANXXXXXXXXXXXXXXXXXXXXDIXXFFDLNQISIEEE---- 197
                DLN   K     K +                         FDLNQIS EEE    
Sbjct: 136 -----DLNHSEKAHDETKTSPKRR------------------VPLFDLNQISGEEEQETE 195

Query: 198 -----ELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQ 254
                +  TR E  ++    K L+    + QQ D+K  +CR  G+G   + KRKISWQD 
Sbjct: 196 AVDNNQENTRVEESNSC---KRLMISSIEMQQKDVKPSSCRNGGNG---SNKRKISWQDP 207

[Close]
BLAST of Carg10000 vs. TAIR10
Match: AT4G30630.1 (unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 69/223 (30.94%), Postives = 104/223 (46.64%), Query Frame = 0 

Query: 37  LEKETGTIKSKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQ-LSTKEHY-----SNGDLMQ 96
           LEKE    + +L+M+KQK++TL +EVRFLR+RYE+L  +Q L T         S G  + 
Sbjct: 27  LEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEVP 86

Query: 97  QKQFHNNKKGKNVARRRPALQPVMAISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT 156
           +K     KK   V    P     +  +  N+KE +          +  +   DL++K K 
Sbjct: 87  RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEAL----------ANNVASCDLDKKRKR 146

Query: 157 SSRKKANXXXXXXXXXXXXXXXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKS 216
           S  + ++                    D    FDLNQIS EEEE +   E + A  +K +
Sbjct: 147 S--RGSDVLTFPVSLPDLNGEGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAEAMKNA 206

Query: 217 LLRGGNDEQQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV 254
           +L     +   + K+  C  +    +RA KRK++WQD VAL V
Sbjct: 207 MLDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

[Close]
BLAST of Carg10000 vs. TrEMBL
Match: tr|A0A1S3B8I5|A0A1S3B8I5_CUCME (uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 8.8e-80
Identity = 199/263 (75.67%), Postives = 209/263 (79.47%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTLIA
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQ-----FHNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSNG+ +QQKQ      +N KK KN  RRR ALQP+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNXKKVKNGGRRRTALQPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN-----XXXXXXXXXXXXX 180
           IS INQKERID    +P+QNSTPIPVLDLNQKAKTSSRKKAN     XXXXXXXXXXXXX
Sbjct: 121 ISDINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
           XXXXXXX  XX      ISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 XXXXXXXXXXXXXXXXXISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Carg10000 vs. TrEMBL
Match: tr|A0A0A0LW13|A0A0A0LW13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 8.8e-80
Identity = 198/263 (75.29%), Postives = 211/263 (80.23%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+      +SQYPVYED K RFKH  LL DY  LEKETGT+K KLQMMKQKKMTL+A
Sbjct: 1   MKKMK----GVVSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQF-----HNNKKGKNVARRRPALQPVMA 120
           EVRFLRKRYEYLM NQ STK+HYSN + +QQKQ+     +NNKKGKN  RRR AL+P+  
Sbjct: 61  EVRFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPT 120

Query: 121 ISHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN-----XXXXXXXXXXXXX 180
           IS INQKERID    +PLQNSTPIPVLDLNQKAKTSSRKKA+     XXXXXXXXXXXXX
Sbjct: 121 ISDINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRG 240
           XXXXXXX  XX      ISIEEEELQT YEPL   ELKKSLLRGGNDEQQNDIKI ACR 
Sbjct: 181 XXXXXXXXXXXXXXXXXISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRS 240

Query: 241 IGDGPSRAGKRKISWQDQVALRV 254
           IGDGPSRAGKRKISWQDQVALRV
Sbjct: 241 IGDGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Carg10000 vs. TrEMBL
Match: tr|I1JGQ6|I1JGQ6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100786273 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 115/264 (43.56%), Postives = 144/264 (54.55%), Query Frame = 0 

Query: 1   MKKMRVKGAAALS-QYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLI 60
           MKKM  KG   +   Y VY+D +AR +H  LL DY+ L KET  ++ KLQ  KQKK  L 
Sbjct: 1   MKKM--KGVVPMEPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATKQKKFMLE 60

Query: 61  AEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQK---QFHNNKKGKNVARRRPALQPVMAI 120
            EVRFLR+RY YL+ + +  K       +  QK   Q     KGKN  ++ P L+P    
Sbjct: 61  DEVRFLRQRYNYLLKHPI-LKPQPKQQVVKPQKLKIQAPIISKGKNYNKKEPNLRPHHPA 120

Query: 121 SHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN------XXXXXXXXXXXXX 180
           SH+N   RI     VPL+ +  +   DLN  A++SS+K A+                   
Sbjct: 121 SHLNSNGRISNVADVPLKKTGHL--FDLNLNARSSSKKDASINISGPPVLNLNHKERINS 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKI-LACR 240
                   +  FFDLNQIS EEEELQ   EP+   E K+S  R   DEQ  DIK+  ACR
Sbjct: 181 SKEATKKSVTPFFDLNQISREEEELQGNSEPMGIEEPKRSSQRVATDEQHGDIKLSAACR 240

Query: 241 GIGDGPSRAGKRKISWQDQVALRV 254
            +GDG +RAGKRKISWQDQVALRV
Sbjct: 241 SVGDGSNRAGKRKISWQDQVALRV 259

[Close]
BLAST of Carg10000 vs. TrEMBL
Match: tr|A0A0B2SET9|A0A0B2SET9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037006 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 115/264 (43.56%), Postives = 144/264 (54.55%), Query Frame = 0 

Query: 1   MKKMRVKGAAALS-QYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLI 60
           MKKM  KG   +   Y VY+D +AR +H  LL DY+ L KET  ++ KLQ  KQKK  L 
Sbjct: 1   MKKM--KGVVPMEPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATKQKKFMLE 60

Query: 61  AEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQK---QFHNNKKGKNVARRRPALQPVMAI 120
            EVRFLR+RY YL+ + +  K       +  QK   Q     KGKN  ++ P L+P    
Sbjct: 61  DEVRFLRQRYNYLLKHPI-LKPQPKQQVVKPQKLKIQAPIISKGKNYNKKEPNLRPHHPA 120

Query: 121 SHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKAN------XXXXXXXXXXXXX 180
           SH+N   RI     VPL+ +  +   DLN  A++SS+K A+                   
Sbjct: 121 SHLNSNGRISNVADVPLKKTGHL--FDLNLNARSSSKKDASINISGPPVLNLNHKERINS 180

Query: 181 XXXXXXXDIXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKI-LACR 240
                   +  FFDLNQIS EEEELQ   EP+   E K+S  R   DEQ  DIK+  ACR
Sbjct: 181 SKEATKKSVTPFFDLNQISREEEELQGNSEPMGIEEPKRSSQRVATDEQHGDIKLSAACR 240

Query: 241 GIGDGPSRAGKRKISWQDQVALRV 254
            +GDG +RAGKRKISWQDQVALRV
Sbjct: 241 SVGDGSNRAGKRKISWQDQVALRV 259

[Close]
BLAST of Carg10000 vs. TrEMBL
Match: tr|A0A1J7H4F7|A0A1J7H4F7_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27207 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.9e-37
Identity = 106/262 (40.46%), Postives = 145/262 (55.34%), Query Frame = 0 

Query: 1   MKKMRVKGAAALSQYPVYEDPKARFKHHGLLHDYQVLEKETGTIKSKLQMMKQKKMTLIA 60
           MKKM+       + YP+YED +AR +H  LL DY+ L KET  ++ KLQ+ KQK+  L A
Sbjct: 2   MKKMK---GVVFNHYPLYEDQRARLRHQSLLQDYEDLHKETNGMRIKLQVAKQKQSLLAA 61

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNN----KKGKNVARRRPALQPVMAI 120
           EVRFLR+RY YLM N   + +     D+ Q ++         KG++  R+  AL+P +A 
Sbjct: 62  EVRFLRQRYTYLMKN--PSPKPQPKQDVSQPRKLKTQAPIPSKGRSYHRKESALRPPIA- 121

Query: 121 SHINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSSRKKANXXXXXXXXXXXXXXXXXXX 180
           SH+  K++I  G    LQ   P    DLNQ A++  ++ A+                   
Sbjct: 122 SHLKTKQKISNGVDFALQK--PARKFDLNQSARSLGKQDASFLSSAPSLELNHNNRIYAG 181

Query: 181 XD-----IXXFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDEQQNDIKILACRGI 240
            +     +  FFDLNQIS EEEEL    EP    E K+      ++EQ+NDIK+  CR +
Sbjct: 182 KETVKKSVAPFFDLNQISTEEEELLGNVEPSRIDESKRLTQIDEDEEQRNDIKLSVCRNL 241

Query: 241 GDGPSRAGKRKISWQDQVALRV 254
           G+G +R GKRKISWQDQVALRV
Sbjct: 242 GNGSNRTGKRKISWQDQVALRV 255

The following BLAST results are available for this feature:
BLAST of Carg10000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022921741.11.1e-11396.44uncharacterized protein LOC111429897 [Cucurbita moschata][more]
XP_023516535.15.2e-10890.31uncharacterized protein LOC111780386 [Cucurbita pepo subsp. pepo][more]
XP_022988590.13.0e-9582.17uncharacterized protein LOC111485789 [Cucurbita maxima][more]
XP_008443848.11.3e-7975.67PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo][more]
KGN65169.11.3e-7975.29hypothetical protein Csa_1G256780 [Cucumis sativus][more]
BLAST of Carg10000 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57910.11.1e-1932.52unknown protein[more]
AT4G30630.11.1e-1430.94unknown protein[more]
BLAST of Carg10000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg10000 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B8I5|A0A1S3B8I5_CUCME8.8e-8075.67uncharacterized protein LOC103487344 OS=Cucumis melo OX=3656 GN=LOC103487344 PE=... [more]
tr|A0A0A0LW13|A0A0A0LW13_CUCSA8.8e-8075.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256780 PE=4 SV=1[more]
tr|I1JGQ6|I1JGQ6_SOYBN4.9e-3843.56Uncharacterized protein OS=Glycine max OX=3847 GN=100786273 PE=4 SV=1[more]
tr|A0A0B2SET9|A0A0B2SET9_GLYSO4.9e-3843.56Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_037006 PE=4 SV=1[more]
tr|A0A1J7H4F7|A0A1J7H4F7_LUPAN1.9e-3740.46Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27207 PE=4 S... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10000-RACarg10000-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34807:SF3SUBFAMILY NOT NAMEDcoord: 1..253
NoneNo IPR availablePANTHERPTHR34807FAMILY NOT NAMEDcoord: 1..253

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg10000Cla018741Watermelon (97103) v1carwmB0126
Carg10000Csa2G035530Cucumber (Chinese Long) v2carcuB0140
Carg10000Csa1G256780Cucumber (Chinese Long) v2carcuB0136
Carg10000MELO3C010213Melon (DHL92) v3.5.1carmeB0131
Carg10000ClCG06G012480Watermelon (Charleston Gray)carwcgB0125
Carg10000CSPI02G05220Wild cucumber (PI 183967)carcpiB0144
Carg10000CSPI01G17760Wild cucumber (PI 183967)carcpiB0138
Carg10000Cucsa.090140Cucumber (Gy14) v1carcgyB0151
Carg10000CmaCh11G004540Cucurbita maxima (Rimu)carcmaB0169
Carg10000CmaCh10G004620Cucurbita maxima (Rimu)carcmaB0166
Carg10000CmoCh11G004540Cucurbita moschata (Rifu)carcmoB0175
Carg10000CmoCh10G004960Cucurbita moschata (Rifu)carcmoB0172
Carg10000Lsi06G011470Bottle gourd (USVL1VR-Ls)carlsiB117
Carg10000Lsi11G006880Bottle gourd (USVL1VR-Ls)carlsiB112
Carg10000Cp4.1LG18g05730Cucurbita pepo (Zucchini)carcpeB0185
Carg10000Cp4.1LG04g08730Cucurbita pepo (Zucchini)carcpeB0186
Carg10000CsGy1G017940Cucumber (Gy14) v2carcgybB0132
Carg10000CsGy2G005360Cucumber (Gy14) v2carcgybB0138
Carg10000MELO3C010213.2Melon (DHL92) v3.6.1carmedB0135
Carg10000CsaV3_2G007570Cucumber (Chinese Long) v3carcucB0148
Carg10000CsaV3_1G029030Cucumber (Chinese Long) v3carcucB0142
Carg10000Cla97C06G121710Watermelon (97103) v2carwmbB0133
Carg10000Bhi06G001226Wax gourdcarwgoB0156
Carg10000Bhi02G000677Wax gourdcarwgoB0165
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg10000Carg14081Silver-seed gourdcarcarB151
The following block(s) are covering this gene:
GeneOrganismBlock
Carg10000Watermelon (97103) v2carwmbB0132
Carg10000Wax gourdcarwgoB0160
Carg10000Silver-seed gourdcarcarB154
Carg10000Cucurbita maxima (Rimu)carcmaB0165
Carg10000Cucumber (Chinese Long) v2carcuB0133