Cp4.1LG18g05730 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g05730
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCoatomer subunit gamma
LocationCp4.1LG18 : 6197952 .. 6200562 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAATTAAGCACTTTGGACAACTTAGTCCTTTACCTTCTCCATCTTGGAAAAAGCTGAGTTTGAGGCTTGGAGATGAGGGGTAAAAAGGGAAGAAGAGAGGGAAAATAAAGGGGTAGTTTAGTAATTCTGTATTAAGAATTGACCTACCCGCTATAACAATGGCATCCTCCCTCCTTTCAGATTCATGAACATGGCGAAGGAAGAAAAGATTGTGATGAAAAAGCGAGGAGGGAGGAAGGGACTTCCCAAGCAATAGAACCAGCCCAGCCCCTGAATTGGATCCGATCTTCGTCCATTACAGGCCTGGATCGAGCCCTCAAAGCAAAATACAGTCTCTTTCTCTCTCTCTCTAGAACCCTAGAAGTTTCTCTTGTTGCAGAAAAGGGGGAAGAGAGAGAGGGAGAGAGGGTTGGGGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCACCCAAATTGTGTGTCGCTCTGTCGTTGGCATCCACGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAAGGGAAGAAAGAGTTGGAAAGAAAAGAAAGGAAAGCGAAGATGATGGATATCGAGATGTCTTCTAATGTCCTCCAACCAAACCCACCTCTCACAAACATCTTCATCACTGTCTCTGAAAACAACAATATTTTGCACCGAGTTATGTGGGCTTTTTTGGGTTTTAGTTGGCTCGGTCAGAGATTCACAGAGAAAACAGGAAACCAGGAACCTTCACCCACCCCCAACCCCTTCCGTCGCTTCCTTCCCAATTCCCCCATCAATTCCCATCCATTTCTCTTTTCTCTTTCTTCTTTCTCCTTCTCTCCCTCGTTCTTTCCCCATCTAACGTTTTGGTTCTTTCCCCATCTGGGTTCTTAATTTCCTTCCTTCCTTCCCATCTATGAAGAAGATGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCAGGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGTAATTTTCTTTTGCAGCTTCTACGGATATGGGGTTTGTTTATCTCTCGTGATTCTATCAGATCTGGCTTTCTTTTGATGAATGTTTGAATATTTTCTTCAGATCTTCTCATATATTGATTTCATGCGAGATTTGAGTTGTTTCTTTTTTCATAGAGTTTCTGGTTTGGAAGAGGGAAAGACGATTATGATCTATTAGCTCTCAATCATGGAAACTTGATTTTTCCCCCCTTTCTTTCGTTGGGCTAAGCTAATTCTTCCGAGTTCTGAACTGGCTATTTTCTTGGGTTAAATTTTAGCCCTCTACTTCTGGTTGTTCAAACGATGATATAAGAACAAAGATTTATGGATTGTTTATTGAAATTTGAAATACCCATCTTAGATCATCATCCTCCTCCCCTCAAGTTCTGAGTTTGTGACATAGAGATCGGTTTAAGACTCAGGAATGTTATGGATGAACAAACAGTTGAAAGTTTTTGTTTTCCTTCCAGGAAACAGGAACTGTCAAGAGAAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCCGGTATAATCTTTACACTATTACATTGTATTTCTACTGATCTTCATCAGGAATTAGTGAATTGTTTAGGCCTAACTATGAGTCTACGTTTATATTGAAGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCAAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATCAAGTGGCTAGCAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTGATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAAACTTCTAGGAAGAAAGCTTATCAACAGAATCCAACGCCCGTTTTCGACTTGAACCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGGTAATTGTCTAAGGGGACTTATTTGGCTACTAATGTTATGATTGCTAAACTCTATCAACCTCCTCTCCCTAACTATTGTTCCTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGCGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCGGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGAGTTCATTTCTATCTCTAGTGTCACTTAGAACTCTACTAGTTGTACATGCATTAACATTTAAACAAAGAATGATGATGAAGAATCGAAGTGGCAATCCTTCAATCCATTGTCTAGTTCTTCTGTAGAGAAGTAAAGCATGGCCTGGAATGCTATCAGAATTCTTAATGGCTGTTGGCTAAGCTTAAACCTCAAACTTTTCTTCTCTAGTTGGCTAAGCTCTGATTCTTTCTACATGGAACTAA

mRNA sequence

GTTAATTAAGCACTTTGGACAACTTAGTCCTTTACCTTCTCCATCTTGGAAAAAGCTGAGTTTGAGGCTTGGAGATGAGGGGTAAAAAGGGAAGAAGAGAGGGAAAATAAAGGGGTAGTTTAGTAATTCTGTATTAAGAATTGACCTACCCGCTATAACAATGGCATCCTCCCTCCTTTCAGATTCATGAACATGGCGAAGGAAGAAAAGATTGTGATGAAAAAGCGAGGAGGGAGGAAGGGACTTCCCAAGCAATAGAACCAGCCCAGCCCCTGAATTGGATCCGATCTTCGTCCATTACAGGCCTGGATCGAGCCCTCAAAGCAAAATACAGTCTCTTTCTCTCTCTCTCTAGAACCCTAGAAGTTTCTCTTGTTGCAGAAAAGGGGGAAGAGAGAGAGGGAGAGAGGGTTGGGGCGCACCCCCATCGAGGAGAGGGAAGAGTCTGCGCCACCCAAATTGTGTGTCGCTCTGTCGTTGGCATCCACGGGCATTGAATGGCCCAGGTGGACCAGAATTTATGTAGAAGGAAAAACAAAAAAAGGGAAGAAAGAGTTGGAAAGAAAAGAAAGGAAAGCGAAGATGATGGATATCGAGATGTCTTCTAATGTCCTCCAACCAAACCCACCTCTCACAAACATCTTCATCACTGTCTCTGAAAACAACAATATTTTGCACCGAGTTATGTGGGCTTTTTTGGGTTTTAGTTGGCTCGGTCAGAGATTCACAGAGAAAACAGGAAACCAGGAACCTTCACCCACCCCCAACCCCTTCCGTCGCTTCCTTCCCAATTCCCCCATCAATTCCCATCCATTTCTCTTTTCTCTTTCTTCTTTCTCCTTCTCTCCCTCGTTCTTTCCCCATCTAACGTTTTGGTTCTTTCCCCATCTGGGTTCTTAATTTCCTTCCTTCCTTCCCATCTATGAAGAAGATGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCAGGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTGTCAAGAGAAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCCGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCAAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATCAAGTGGCTAGCAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTGATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAAACTTCTAGGAAGAAAGCTTATCAACAGAATCCAACGCCCGTTTTCGACTTGAACCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGCGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCGGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGAGTTCATTTCTATCTCTAGTGTCACTTAGAACTCTACTAGTTGTACATGCATTAACATTTAAACAAAGAATGATGATGAAGAATCGAAGTGGCAATCCTTCAATCCATTGTCTAGTTCTTCTGTAGAGAAGTAAAGCATGGCCTGGAATGCTATCAGAATTCTTAATGGCTGTTGGCTAAGCTTAAACCTCAAACTTTTCTTCTCTAGTTGGCTAAGCTCTGATTCTTTCTACATGGAACTAA

Coding sequence (CDS)

ATGAAGAAGATGAAAGGGGCTGCTGCTCTCTCCCAATACCCTGTGTATGAGGATCCCAAGGCCAGATTCAAGCATCAGGGTCTCCTCCATGATTATCAGGTCTTGGAGAAGGAAACAGGAACTGTCAAGAGAAAATTGCAGATGATGAAGCAAAAGAAGATGACCTTGATTGCAGAAGTCCGATTCTTGAGGAAGAGATATGAGTACTTAATGAACAACCAATTATCAACAAAGGAACATTATTCAAATGGAGATCTAATGCAGCAGAAGCAATTTCATAATCAAGTGGCTAGCAATAATAAGAAGGGGAAGAATGTTGCAAGAAGAAGACCTGCTTTGCAACCTGTCATGGCTATCTCTGATATAAACCAAAAGGAAAGAATTGACAAAGGATTCAGTGTTCCTCTCCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAAACTTCTAGGAAGAAAGCTTATCAACAGAATCCAACGCCCGTTTTCGACTTGAACCAGAAGGAAAGAATGTATAGTGAGAGAGACATCACTCCATTTTTTGATTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACTCGTTACGAGCCATTGAGCGCGGTTGAGTTGAAGAAAAGCCTTCTTCGAGGAGGGAACGACGAGCGGCAAAACGATATCAAGATTTTGGCGTGCAGGGGCATTGGAGATGGTCCAAGTCGAGCTGGTAAGAGGAAGATTTCATGGCAAGACCAGGTTGCTTTAAGGGTTTGA

Protein sequence

MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSRKKAYQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV
Homology
[Close]
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match: A0A0A0LW13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256780 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.3e-103
Identity = 210/261 (80.46%), Postives = 222/261 (85.06%), Query Frame = 1 

Query: 1   MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEV 60
           MKKMKG   +SQYPVYED K RFKHQ LL DY  LEKETGTVKRKLQMMKQKKMTL+AEV
Sbjct: 1   MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEV 60

Query: 61  RFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAIS 120
           RFLRKRYEYLM NQ STK+HYSN + +QQKQ+ NQVA+NNKKGKN  RRR AL+P+  IS
Sbjct: 61  RFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTIS 120

Query: 121 DINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERM---- 180
           DINQKERID    +PLQNSTPIPVLDLNQKAKT SRKKA Q N TPVFDLNQKERM    
Sbjct: 121 DINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGR 180

Query: 181 -YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIG 240
             SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDE+QNDIKI ACR IG
Sbjct: 181 DASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIG 240

Query: 241 DGPSRAGKRKISWQDQVALRV 256
           DGPSRAGKRKISWQDQVALRV
Sbjct: 241 DGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match: A0A0B0NU00_GOSAR (Ribosomal RNA small subunit methyltransferase G OS=Gossypium arboreum GN=F383_10342 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.3e-48
Identity = 122/266 (45.86%), Postives = 170/266 (63.91%), Query Frame = 1 

Query: 1   MKKMKGAAA---LSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLI 60
           MKKMKG AA    S YP+YED + RFKHQ L+ D++ L KET  ++ KLQMMK++K+TL+
Sbjct: 1   MKKMKGVAASMGYSPYPMYEDQRTRFKHQSLMQDFEDLHKETEAMRMKLQMMKERKLTLL 60

Query: 61  AEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVM 120
           AEVRFL++R+++LM N+ S     ++ + +Q +    + + +N K K    +  +L+ + 
Sbjct: 61  AEVRFLKRRHKFLMQNRSSNT--LASRNFVQPQSTMVKRSKSNVKEKKSTGKEHSLRHLA 120

Query: 121 AISDINQKERIDKGFSVPLQNST-PIPVLDLNQKA--KTSRKKAYQQNPTPVFDLNQKER 180
              D+NQK    K +S      T P  + DLNQK     + ++   ++ +P+ DLNQ+ER
Sbjct: 121 MGFDLNQK---GKTYSEKETTFTHPSLIFDLNQKQHKNINGEEVILRSSSPIIDLNQRER 180

Query: 181 MYS-----ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILA 240
           +YS      R +TP FDLNQIS EEEELQ     +   E KKS +R  +DE+ NDIKI A
Sbjct: 181 LYSGKEATARTMTPIFDLNQISREEEELQAMDNSMRIDEFKKSSIRMASDEQHNDIKISA 240

Query: 241 CRGIGDGPSRAGKRKISWQDQVALRV 256
           CR  G+GP+R GKRKISWQDQVALRV
Sbjct: 241 CRNTGNGPNRVGKRKISWQDQVALRV 261

[Close]
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match: I1MT15_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G073100 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47
Identity = 120/262 (45.80%), Postives = 164/262 (62.60%), Query Frame = 1 

Query: 1   MKKMKGAAALSQ-YPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAE 60
           MKKMKG  +L   Y VY+D +AR +HQ LL DY+ L KET  ++RKLQ  +QKK+ L  E
Sbjct: 1   MKKMKGVVSLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLEDE 60

Query: 61  VRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAI 120
           VRFLR+RY YL+ + +  K H       Q+ +    + S   KGKN +R+ P L+P    
Sbjct: 61  VRFLRQRYNYLLKHPI-LKPHPKQVVKPQKLKLQAPIIS---KGKNYSRKEPTLRP-HPT 120

Query: 121 SDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSRKKAYQQNPTPVFDLNQKERMYSER 180
           S +N   RI      PL+ +  +  L+LN ++ + +  ++  +  PVF+LN KER++S +
Sbjct: 121 SHLNSNGRISNVAEAPLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERIHSSK 180

Query: 181 D-----ITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKI-LACRGI 240
           +     +TPFFDLNQIS EEEELQ   E +   E K+S  R   DE+ +DIK+  ACR +
Sbjct: 181 EATKKSVTPFFDLNQISREEEELQGNSEAMRIEEPKRSTQRVATDEQHSDIKLSAACRSV 240

Query: 241 GDGPSRAGKRKISWQDQVALRV 256
           GDG +RAGKRKISWQDQVALRV
Sbjct: 241 GDGSNRAGKRKISWQDQVALRV 257

[Close]
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match: A0A0D2QK29_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G032800 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47
Identity = 118/265 (44.53%), Postives = 168/265 (63.40%), Query Frame = 1 

Query: 1   MKKMKGAAA---LSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLI 60
           MKKMKG AA    S YP+YED + RFKHQ L+ D++ L KET  ++ KLQMMK++K+TL+
Sbjct: 1   MKKMKGVAASMGYSPYPMYEDQRTRFKHQSLMQDFEDLHKETEAMRMKLQMMKEQKLTLL 60

Query: 61  AEVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVM 120
           AEVRFL++R+++LM N+ S     +  + +Q +    + + +N K K    +  +L+ + 
Sbjct: 61  AEVRFLKRRHKFLMQNRSSNT--LAGRNFVQPQSTVVKRSKSNVKEKKSTGKEHSLRHLA 120

Query: 121 AISDINQKERIDKGFSVPLQNSTPIPVLDLNQKA--KTSRKKAYQQNPTPVFDLNQKERM 180
              D+NQK +          +  P  + DLNQK     + ++   ++ +P+ DLNQ+ER+
Sbjct: 121 IGFDLNQKGKTYSEKETTFAH--PSLIFDLNQKQHKNINGEEVILRSSSPILDLNQRERL 180

Query: 181 YSERD-----ITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILAC 240
           YS ++     +TP FDLNQIS EEEELQ     +   E KKS +R  +DE+ NDIKI AC
Sbjct: 181 YSGKEATAPTMTPIFDLNQISREEEELQAMDNSMRIEEFKKSSIRMASDEQHNDIKISAC 240

Query: 241 RGIGDGPSRAGKRKISWQDQVALRV 256
           R  G+GP+R GKRKISWQDQVALRV
Sbjct: 241 RNTGNGPNRVGKRKISWQDQVALRV 261

[Close]
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match: A0A0B2Q8A3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005697 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.1e-47
Identity = 120/262 (45.80%), Postives = 164/262 (62.60%), Query Frame = 1 

Query: 1   MKKMKGAAALSQ-YPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAE 60
           MKKMKG  +L   Y VY+D +AR +HQ LL DY+ L KET  ++RKLQ  +QKK+ L  E
Sbjct: 1   MKKMKGVVSLDPPYEVYQDQRARLRHQSLLQDYEDLHKETEAMRRKLQATRQKKLMLEDE 60

Query: 61  VRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAI 120
           VRFLR+RY YL+ + +  K H       Q+ +    + S   KGKN +R+ P L+P    
Sbjct: 61  VRFLRQRYNYLLKHPI-LKPHPKQVVKPQKLKLQAPIIS---KGKNYSRKEPTLRP-HPT 120

Query: 121 SDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKTSRKKAYQQNPTPVFDLNQKERMYS-- 180
           S +N   RI      PL+ +  +  L+LN ++ + +  ++  +  PVF+LN KER++S  
Sbjct: 121 SHLNSNGRISNVAEAPLKKTGHLFDLNLNARSSSKKDASFNGSAPPVFELNHKERIHSGK 180

Query: 181 ---ERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKI-LACRGI 240
              ++ +TPFFDLNQIS EEEELQ   E +   E K+S  R   DE+ +DIK+  ACR +
Sbjct: 181 EATKKSVTPFFDLNQISREEEELQGNSEAMRIEEPKRSTQRVATDEQHSDIKLSAACRSV 240

Query: 241 GDGPSRAGKRKISWQDQVALRV 256
           GDG +RAGKRKISWQDQVALRV
Sbjct: 241 GDGSNRAGKRKISWQDQVALRV 257

[Close]
BLAST of Cp4.1LG18g05730 vs. TAIR10
Match: AT4G30630.1 (AT4G30630.1 unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.6e-18
Identity = 74/222 (33.33%), Postives = 109/222 (49.10%), Query Frame = 1 

Query: 35  LEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQ-LSTKEHYSNGDLMQQKQFH 94
           LEKE    +++L+M+KQK++TL +EVRFLR+RYE+L  +Q L T             +  
Sbjct: 27  LEKELEIKRKRLEMIKQKRLTLKSEVRFLRRRYEHLKQDQTLETSPEMLRLSESGGLEVP 86

Query: 95  NQVASNNKKGKNVARRRPALQPVMAISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT 154
            + +   KK   V    P     +  +  N+KE +          +  +   DL++K K 
Sbjct: 87  RKPSGERKKQSGVRASVPCFDLKLKNTICNEKEAL----------ANNVASCDLDKKRKR 146

Query: 155 SRKKAYQQNPTPVFDLNQKERMYSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSL 214
           SR       P  + DLN  E   S  D  P FDLNQIS EEEE +   E + A  +K ++
Sbjct: 147 SRGSDVLTFPVSLPDLNG-EGNTSGTDKVPGFDLNQISREEEEPEVNGEHMVAEAMKNAM 206

Query: 215 LRGGNDERQNDIKILACRGIGDGPSRAGKRKISWQDQVALRV 256
           L     +   + K+  C  +    +RA KRK++WQD VAL V
Sbjct: 207 LDNRISDLHVERKLPICGDVEKELNRAVKRKVTWQDPVALSV 237

[Close]
BLAST of Cp4.1LG18g05730 vs. TAIR10
Match: AT5G57910.1 (AT5G57910.1 unknown protein)

HSP 1 Score: 88.6 bits (218), Expect = 6.1e-18
Identity = 79/244 (32.38%), Postives = 119/244 (48.77%), Query Frame = 1 

Query: 16  YEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEVRFLRKRYEYLMNNQL 75
           +EDPK RF+H  L+ DY  L  ET  ++++LQ ++++K TL+AEVRFLR+RY +L  +Q 
Sbjct: 16  FEDPKVRFRHHSLMQDYGELHMETEAMRKRLQAVRERKATLMAEVRFLRRRYRHLRQDQP 75

Query: 76  S--TKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAISDINQKERIDKGFS 135
               K   SNG     K+   +V+ +NK               +++ D+N  E+      
Sbjct: 76  QEIKKVRRSNGG----KKIRVEVSPSNKSEAETKH--------VSLPDLNHSEK------ 135

Query: 136 VPLQNSTPIPVLDLNQKAKTSRKKAYQQNPTPVFDLNQKERMYSERDITPFFDLNQISIE 195
                         + + KTS K+       P+FDLNQ      E   T   D NQ +  
Sbjct: 136 -------------AHDETKTSPKRR-----VPLFDLNQISG--EEEQETEAVDNNQENTR 195

Query: 196 EEELQT-RYEPLSAVELKKSLLRGGNDERQNDIKILACRGIGDGPSRAGKRKISWQDQV- 255
            EE  + +   +S++E+           +Q D+K  +CR  G+G   + KRKISWQD V 
Sbjct: 196 VEESNSCKRLMISSIEM-----------QQKDVKPSSCRNGGNG---SNKRKISWQDPVA 207

[Close]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match: gi|700210073|gb|KGN65169.1| (hypothetical protein Csa_1G256780 [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 7.6e-103
Identity = 210/261 (80.46%), Postives = 222/261 (85.06%), Query Frame = 1 

Query: 1   MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEV 60
           MKKMKG   +SQYPVYED K RFKHQ LL DY  LEKETGTVKRKLQMMKQKKMTL+AEV
Sbjct: 1   MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEV 60

Query: 61  RFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAIS 120
           RFLRKRYEYLM NQ STK+HYSN + +QQKQ+ NQVA+NNKKGKN  RRR AL+P+  IS
Sbjct: 61  RFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTIS 120

Query: 121 DINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERM---- 180
           DINQKERID    +PLQNSTPIPVLDLNQKAKT SRKKA Q N TPVFDLNQKERM    
Sbjct: 121 DINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGR 180

Query: 181 -YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIG 240
             SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDE+QNDIKI ACR IG
Sbjct: 181 DASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIG 240

Query: 241 DGPSRAGKRKISWQDQVALRV 256
           DGPSRAGKRKISWQDQVALRV
Sbjct: 241 DGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match: gi|659086278|ref|XP_008443848.1| (PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.2e-102
Identity = 210/261 (80.46%), Postives = 220/261 (84.29%), Query Frame = 1 

Query: 1   MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEV 60
           MKKMKG   +SQYPVYED K RFKHQ LL DY  LEKETGTVKRKLQMMKQKKMTLIAEV
Sbjct: 1   MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLIAEV 60

Query: 61  RFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAIS 120
           RFLRKRYEYLM NQ STK+HYSNG+ +QQKQ  NQVA+NNKK KN  RRR ALQP+  IS
Sbjct: 61  RFLRKRYEYLMKNQPSTKDHYSNGETVQQKQSKNQVANNNKKVKNGGRRRTALQPLPTIS 120

Query: 121 DINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERM---- 180
           DINQKERID    +P+QNSTPIPVLDLNQKAKT SRKKA Q N  PVFDLNQKERM    
Sbjct: 121 DINQKERID----MPMQNSTPIPVLDLNQKAKTSSRKKANQHNSIPVFDLNQKERMCSGR 180

Query: 181 -YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIG 240
             SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDE+QNDIKI ACR IG
Sbjct: 181 DASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIG 240

Query: 241 DGPSRAGKRKISWQDQVALRV 256
           DGPSRAGKRKISWQDQVALRV
Sbjct: 241 DGPSRAGKRKISWQDQVALRV 255

[Close]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match: gi|778665044|ref|XP_011648472.1| (PREDICTED: uncharacterized protein LOC101209712 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 2.9e-102
Identity = 209/260 (80.38%), Postives = 221/260 (85.00%), Query Frame = 1 

Query: 1   MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEV 60
           MKKMKG   +SQYPVYED K RFKHQ LL DY  LEKETGTVKRKLQMMKQKKMTL+AEV
Sbjct: 1   MKKMKGV--VSQYPVYEDSKTRFKHQSLLQDYHDLEKETGTVKRKLQMMKQKKMTLMAEV 60

Query: 61  RFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAIS 120
           RFLRKRYEYLM NQ STK+HYSN + +QQKQ+ NQVA+NNKKGKN  RRR AL+P+  IS
Sbjct: 61  RFLRKRYEYLMKNQPSTKDHYSNVETVQQKQWKNQVANNNKKGKNGGRRRTALKPLPTIS 120

Query: 121 DINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERM---- 180
           DINQKERID    +PLQNSTPIPVLDLNQKAKT SRKKA Q N TPVFDLNQKERM    
Sbjct: 121 DINQKERID----MPLQNSTPIPVLDLNQKAKTSSRKKASQHNSTPVFDLNQKERMCSGR 180

Query: 181 -YSERDITPFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIG 240
             SER+ITPFFDLNQISIEEEELQT YEPL   ELKKSLLRGGNDE+QNDIKI ACR IG
Sbjct: 181 DASERNITPFFDLNQISIEEEELQTHYEPLRVDELKKSLLRGGNDEQQNDIKISACRSIG 240

Query: 241 DGPSRAGKRKISWQDQVALR 255
           DGPSRAGKRKISWQDQVALR
Sbjct: 241 DGPSRAGKRKISWQDQVALR 254

[Close]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match: gi|645275844|ref|XP_008243008.1| (PREDICTED: uncharacterized protein LOC103341282 [Prunus mume])

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 141/265 (53.21%), Postives = 179/265 (67.55%), Query Frame = 1 

Query: 1   MKKMKGAAAL--SQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIA 60
           MKKMKG  A+  S Y  YEDP+ RFKHQ L+ DY+ L+K+   +K+KLQMMKQKK TL+A
Sbjct: 1   MKKMKGILAMEPSSYAGYEDPRTRFKHQSLMQDYEELQKDAEAMKKKLQMMKQKKSTLLA 60

Query: 61  EVRFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMA 120
           EVRFL +RY+YLM NQ          D+++   F  Q  +N  KG++ +++  AL+   A
Sbjct: 61  EVRFLSRRYKYLMGNQSMNSRQKQ--DVVRTHNFETQ-RTNIMKGRSYSKKESALRINHA 120

Query: 121 ISDINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERMY- 180
           + D+NQKERI+ G    L+ S P    DLNQKA+  S K+A  Q PTP FDLNQKER+  
Sbjct: 121 L-DLNQKERINHGMEDTLRKSAP--KFDLNQKARALSGKEATMQKPTPNFDLNQKERIQI 180

Query: 181 -----SERDITPFFDLNQIS-IEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILAC 240
                ++R  TP FDLNQIS  EEEE Q   EPL   E  KSLLRGGNDE+ +D+K+L C
Sbjct: 181 VKESSTKRKSTPVFDLNQISREEEEEFQANCEPLRIEEPNKSLLRGGNDEQHSDMKLLVC 240

Query: 241 RGIGDGPSRAGKRKISWQDQVALRV 256
           R IG+G +R+GKRKI+WQDQVALRV
Sbjct: 241 RTIGNGSNRSGKRKITWQDQVALRV 259

[Close]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match: gi|1009109838|ref|XP_015892389.1| (PREDICTED: uncharacterized protein LOC107426660 [Ziziphus jujuba])

HSP 1 Score: 222.6 bits (566), Expect = 7.7e-55
Identity = 131/261 (50.19%), Postives = 176/261 (67.43%), Query Frame = 1 

Query: 1   MKKMKGAAALSQYPVYEDPKARFKHQGLLHDYQVLEKETGTVKRKLQMMKQKKMTLIAEV 60
           MKKMKG  A+    V+ED + RFK Q L+ DY+ LEKET  +K+K+ +M QKK+TL+AEV
Sbjct: 1   MKKMKGVVAMEPSLVFEDTRNRFKLQSLMQDYEELEKETEVMKQKMTLMNQKKLTLLAEV 60

Query: 61  RFLRKRYEYLMNNQLSTKEHYSNGDLMQQKQFHNQVASNNKKGKNVARRRPALQPVMAIS 120
           RFL++RY+YL++NQ S K    N D+ Q + +  + + N  K KN  ++     PV  + 
Sbjct: 61  RFLKRRYKYLIDNQ-SMKPRQPNKDITQLQNYEIR-SVNTTKAKNYIKKGAPRYPVPVL- 120

Query: 121 DINQKERIDKGFSVPLQNSTPIPVLDLNQKAKT-SRKKAYQQNPTPVFDLNQKERMYSER 180
           ++NQ+ER        L+ S  +P+LDL+ K +T    +   Q+  PVFDLNQ+ER +S +
Sbjct: 121 ELNQRER--NRMEATLEKS--VPILDLHHKMRTFGGMETALQSSKPVFDLNQQERFHSGK 180

Query: 181 DIT-----PFFDLNQISIEEEELQTRYEPLSAVELKKSLLRGGNDERQNDIKILACRGIG 240
           ++T     P FDLNQIS EEEELQ   EPL   +  KSLLRGGNDE+ ND+K+L CR IG
Sbjct: 181 EVTKRKNIPAFDLNQISREEEELQANCEPLGREDSMKSLLRGGNDEQHNDMKLLLCRNIG 240

Query: 241 DGPSRAGKRKISWQDQVALRV 256
           +GPSRAGKRKI+WQDQVALRV
Sbjct: 241 NGPSRAGKRKITWQDQVALRV 254

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g05730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g05730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW13_CUCSA5.3e-10380.46Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256780 PE=4 SV=1[more]
A0A0B0NU00_GOSAR8.3e-4845.86Ribosomal RNA small subunit methyltransferase G OS=Gossypium arboreum GN=F383_10... [more]
I1MT15_SOYBN3.1e-4745.80Uncharacterized protein OS=Glycine max GN=GLYMA_17G073100 PE=4 SV=1[more]
A0A0D2QK29_GOSRA3.1e-4744.53Uncharacterized protein OS=Gossypium raimondii GN=B456_001G032800 PE=4 SV=1[more]
A0A0B2Q8A3_GLYSO4.1e-4745.80Uncharacterized protein OS=Glycine soja GN=glysoja_005697 PE=4 SV=1[more]
BLAST of Cp4.1LG18g05730 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30630.13.6e-1833.33 unknown protein[more]
AT5G57910.16.1e-1832.38 unknown protein[more]
BLAST of Cp4.1LG18g05730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210073|gb|KGN65169.1|7.6e-10380.46hypothetical protein Csa_1G256780 [Cucumis sativus][more]
gi|659086278|ref|XP_008443848.1|2.2e-10280.46PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo][more]
gi|778665044|ref|XP_011648472.1|2.9e-10280.38PREDICTED: uncharacterized protein LOC101209712 [Cucumis sativus][more]
gi|645275844|ref|XP_008243008.1|1.3e-5753.21PREDICTED: uncharacterized protein LOC103341282 [Prunus mume][more]
gi|1009109838|ref|XP_015892389.1|7.7e-5550.19PREDICTED: uncharacterized protein LOC107426660 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0032259 methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008168 methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g05730.1Cp4.1LG18g05730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34807FAMILY NOT NAMEDcoord: 1..255
score: 3.3
NoneNo IPR availablePANTHERPTHR34807:SF3SUBFAMILY NOT NAMEDcoord: 1..255
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g05730Cucsa.090140Cucumber (Gy14) v1cgycpeB0173
Cp4.1LG18g05730Cucsa.093450Cucumber (Gy14) v1cgycpeB0183
Cp4.1LG18g05730CmaCh11G004540Cucurbita maxima (Rimu)cmacpeB132
Cp4.1LG18g05730CmaCh10G004620Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g05730CmoCh11G004540Cucurbita moschata (Rifu)cmocpeB108
Cp4.1LG18g05730CmoCh10G004960Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g05730Cla018741Watermelon (97103) v1cpewmB372
Cp4.1LG18g05730Csa2G035530Cucumber (Chinese Long) v2cpecuB371
Cp4.1LG18g05730Csa1G256780Cucumber (Chinese Long) v2cpecuB356
Cp4.1LG18g05730MELO3C010213Melon (DHL92) v3.5.1cpemeB334
Cp4.1LG18g05730MELO3C004129Melon (DHL92) v3.5.1cpemeB345
Cp4.1LG18g05730ClCG06G012480Watermelon (Charleston Gray)cpewcgB335
Cp4.1LG18g05730CSPI02G05220Wild cucumber (PI 183967)cpecpiB371
Cp4.1LG18g05730CSPI01G17760Wild cucumber (PI 183967)cpecpiB351
Cp4.1LG18g05730Lsi11G006880Bottle gourd (USVL1VR-Ls)cpelsiB283
Cp4.1LG18g05730Lsi06G011470Bottle gourd (USVL1VR-Ls)cpelsiB307
Cp4.1LG18g05730MELO3C010213.2Melon (DHL92) v3.6.1cpemedB392
Cp4.1LG18g05730MELO3C004129.2Melon (DHL92) v3.6.1cpemedB403
Cp4.1LG18g05730CsaV3_2G007570Cucumber (Chinese Long) v3cpecucB0452
Cp4.1LG18g05730CsaV3_1G029030Cucumber (Chinese Long) v3cpecucB0429
Cp4.1LG18g05730Bhi02G000677Wax gourdcpewgoB0466
Cp4.1LG18g05730Bhi06G001226Wax gourdcpewgoB0435
Cp4.1LG18g05730CsGy2G005360Cucumber (Gy14) v2cgybcpeB206
Cp4.1LG18g05730CsGy1G016290Cucumber (Gy14) v2cgybcpeB051
Cp4.1LG18g05730CsGy1G017940Cucumber (Gy14) v2cgybcpeB040
Cp4.1LG18g05730Carg14081Silver-seed gourdcarcpeB0715
Cp4.1LG18g05730Carg10000Silver-seed gourdcarcpeB0185
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g05730Cp4.1LG04g08730Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g05730Cucurbita pepo (Zucchini)cpecpeB370
Cp4.1LG18g05730Cucurbita maxima (Rimu)cmacpeB038
Cp4.1LG18g05730Cucurbita moschata (Rifu)cmocpeB013
Cp4.1LG18g05730Cucumber (Chinese Long) v2cpecuB350
Cp4.1LG18g05730Watermelon (Charleston Gray)cpewcgB334
Cp4.1LG18g05730Watermelon (97103) v1cpewmB362
Cp4.1LG18g05730Cucumber (Gy14) v2cgybcpeB499
Cp4.1LG18g05730Melon (DHL92) v3.6.1cpemedB405
Cp4.1LG18g05730Silver-seed gourdcarcpeB0897
Cp4.1LG18g05730Cucumber (Chinese Long) v3cpecucB0460
Cp4.1LG18g05730Wax gourdcpewgoB0454