Carg09348 (gene) Silver-seed gourd

NameCarg09348
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionStress induced protein
LocationCucurbita_argyrosperma_scaffold_018 : 822549 .. 823031 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA

mRNA sequence

ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA

Coding sequence (CDS)

ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA

Protein sequence

MASSSTIDDEISRSEEIRAPDRIEEGNDRDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCQYLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI
BLAST of Carg09348 vs. NCBI nr
Match: XP_022997532.1 (uncharacterized protein LOC111492425 [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56
Identity = 121/150 (80.67%), Postives = 125/150 (83.33%), Query Frame = 0

Query: 1   MASSSTIDDEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLSRSSS 60
           MASS+TI+DEISRSEEIRAPDRIEEGND                        SRLSRSSS
Sbjct: 1   MASSATIEDEISRSEEIRAPDRIEEGND--RDLDLDEVGVSYSSCGCFFGFGSRLSRSSS 60

Query: 61  VRCQYLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRS 120
           VRC+YLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRS
Sbjct: 61  VRCRYLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRS 120

Query: 121 YALNFDEGIGEEEGRGGRHGFRQPFASPIG 151
           YALNFDEG+GEEEG GGRHGFRQPFASPIG
Sbjct: 121 YALNFDEGMGEEEGGGGRHGFRQPFASPIG 148

BLAST of Carg09348 vs. NCBI nr
Match: XP_023537514.1 (uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 162.9 bits (411), Expect = 8.8e-37
Identity = 95/162 (58.64%), Postives = 110/162 (67.90%), Query Frame = 0

Query: 2   ASSSTIDDEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLSRSSSV 61
           +SSS+  DE  R EE R  +RIEE +D                        SRLSRSSSV
Sbjct: 4   SSSSSAIDETFRLEE-RGSNRIEEESD-------LEVGVSYSSCGGFFGFGSRLSRSSSV 63

Query: 62  RCQYLLL---RENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDP 121
           RC+Y+ L   + +EEV QSWMMKKVKRF++I+KAMA  KWRSFINGIVNKRRSVRFQYDP
Sbjct: 64  RCRYVSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDP 123

Query: 122 RSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           RSYALNFD GIGE+ G GGRHG+  P   P+GLG  MN S+I
Sbjct: 124 RSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157

BLAST of Carg09348 vs. NCBI nr
Match: XP_022131993.1 (uncharacterized protein LOC111004972 [Momordica charantia])

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36
Identity = 95/162 (58.64%), Postives = 112/162 (69.14%), Query Frame = 0

Query: 1   MASSSTIDDEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLSRSS- 60
           MAS S+     S  E +R  DRIEE +D                        SR +RSS 
Sbjct: 1   MASYSSSTSSSSIDETLRT-DRIEEDDD------REVGVSSYSSCGCFFGFGSRQARSSD 60

Query: 61  SVRCQYLLLRENE-EVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDP 120
            VRC+YL L+ +E +VKQSWMMKKVKRFK+IIKA+AGRKWRSFI+GI++K+RSVRFQYDP
Sbjct: 61  GVRCRYLPLQPHEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDP 120

Query: 121 RSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           RSYALNFDEG GE+ G  GRHGFR P A+PIGLG GMN SQ+
Sbjct: 121 RSYALNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155

BLAST of Carg09348 vs. NCBI nr
Match: XP_023002532.1 (uncharacterized protein LOC111496346 [Cucurbita maxima])

HSP 1 Score: 155.2 bits (391), Expect = 1.8e-34
Identity = 96/168 (57.14%), Postives = 110/168 (65.48%), Query Frame = 0

Query: 1   MASSS----TIDDEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLS 60
           MASSS    +  DE  R EE R  +RIEE +D                        S LS
Sbjct: 1   MASSSXXXXSAIDETFRLEE-RGSNRIEEESD-------LEVGVSYSSSGGFFEFGSWLS 60

Query: 61  RSSSVRCQYLLL----RENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSV 120
           RSSSVRC+Y+ L    + +EEV QSWMMKKVKRF++II+AMA  KWRSFINGIVNKRRSV
Sbjct: 61  RSSSVRCRYVSLQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSV 120

Query: 121 RFQYDPRSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           RFQYDPRSYALNFD GIGE+   GGRHG+  P  SP+GLG  MN S+I
Sbjct: 121 RFQYDPRSYALNFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160

BLAST of Carg09348 vs. NCBI nr
Match: XP_008445245.1 (PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 9.2e-26
Identity = 88/156 (56.41%), Postives = 96/156 (61.54%), Query Frame = 0

Query: 9   DEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLSRSSSVRCQYLLL 68
           D   RSE+    DRIEEG D                        SRLSR   VR  YL L
Sbjct: 15  DGTLRSED----DRIEEGED---LRDEEVGGFSYSSCGCFFGFGSRLSR---VRGGYLPL 74

Query: 69  ---RENEEVK-QSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALN 128
              R++EEVK QSWMM+KVKR  +IIKAMAGRKWRS INGI+NKRRSVRFQYDPRSYALN
Sbjct: 75  QSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPRSYALN 134

Query: 129 FDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           FDEG+ EEEGR            PIGLG GMN +QI
Sbjct: 135 FDEGM-EEEGRRS--------LQPIGLGIGMNRNQI 151

BLAST of Carg09348 vs. TAIR10
Match: AT5G25240.1 (unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 72  EEVKQSWMMKKVKRFKDIIKAMAGRKW----RSFINGIVNKRRSVRFQYDPRSYALNFDE 129
           EE + +W  +K+K  K+I + +AG KW    RSF +G    RR V F YD ++Y+LNFD+
Sbjct: 52  EERRGNWGSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDD 111

BLAST of Carg09348 vs. TAIR10
Match: AT5G62865.1 (unknown protein)

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 0

Query: 78  WMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRR-------SVRFQYDPRSYALNFDEGIG 137
           W ++   + ++  + +AG +W++FI       R       S +FQYDP SY+LNFD+   
Sbjct: 61  WWIRASLKIREWSEIVAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDDE 120

Query: 138 EEE--GRGGRHGFRQPFAS 148
           E+E  G GG   F   FAS
Sbjct: 121 EDEYVGLGGLRSFSTRFAS 139

BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1S3BC68|A0A1S3BC68_CUCME (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.1e-26
Identity = 88/156 (56.41%), Postives = 96/156 (61.54%), Query Frame = 0

Query: 9   DEISRSEEIRAPDRIEEGNDXXXXXXXXXXXXXXXXXXXXXXXXSRLSRSSSVRCQYLLL 68
           D   RSE+    DRIEEG D                        SRLSR   VR  YL L
Sbjct: 15  DGTLRSED----DRIEEGED---LRDEEVGGFSYSSCGCFFGFGSRLSR---VRGGYLPL 74

Query: 69  ---RENEEVK-QSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALN 128
              R++EEVK QSWMM+KVKR  +IIKAMAGRKWRS INGI+NKRRSVRFQYDPRSYALN
Sbjct: 75  QSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPRSYALN 134

Query: 129 FDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           FDEG+ EEEGR            PIGLG GMN +QI
Sbjct: 135 FDEGM-EEEGRRS--------LQPIGLGIGMNRNQI 151

BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A0A0LPP6|A0A0A0LPP6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382480 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 7.9e-26
Identity = 75/110 (68.18%), Postives = 80/110 (72.73%), Query Frame = 0

Query: 56  SRSSSVRCQYLLLREN---EEVK--QSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRR 115
           SR S VR  YL L+ N   EEVK  QSWMM KVKR  +IIKA+AGRKWRS INGI+NKRR
Sbjct: 45  SRLSRVRGGYLPLQSNRKTEEVKQHQSWMMTKVKRLNEIIKAVAGRKWRSLINGIINKRR 104

Query: 116 SVRFQYDPRSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI 161
           SVRFQYDPRSYALNFDEGI EEE R   H        PIGLG GMN +QI
Sbjct: 105 SVRFQYDPRSYALNFDEGI-EEEARHTLH--------PIGLGIGMNRNQI 145

BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1Q3AXY5|A0A1Q3AXY5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04098 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 0

Query: 68  LRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDE 127
           L+  EE K+ W+  K+K+ K + + +AG KW++FI     KRR ++FQYDP+SYALNFD+
Sbjct: 60  LQHQEETKEGWLENKLKKVKVLSELLAGPKWKNFIRRF-KKRRLMQFQYDPQSYALNFDD 119

Query: 128 GIG-EEEGRGGRHGFRQPFASPIGLGTG 155
           GI  E E  G    F   +ASP+GL  G
Sbjct: 120 GIDMEVENIGAHLDFTARYASPVGLNKG 146

BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A2P6PXQ6|A0A2P6PXQ6_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297221 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10
Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 56  SRSSSVRCQYLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFIN--GIVNKRRSVR 115
           + ++ +R +Y LL++ E  K++W+++ VK+ +++ + +AG KW++FI   G + K+R V+
Sbjct: 87  NNNNGIRGRY-LLQQGEVSKENWLVENVKKVRELSEVLAGPKWKNFIRSVGTIYKKRRVQ 146

Query: 116 FQYDPRSYALNFDEGIGEEEGRGGRHGFRQP--FASPIGLGTG 155
            QYDP SY LNFDEG+G E        F      AS +G+ TG
Sbjct: 147 AQYDPESYTLNFDEGVGREVDNPAYLHFSSTGYAASSLGMNTG 188

BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1R3J7E6|A0A1R3J7E6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18913 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0

Query: 75  KQSWMMKKVKRFKDIIKAMAGRKWRSFINGIV--NKRRSVRFQYDPRSYALNFDEGIGEE 134
           K+SW+ KK K+ K++ + +AG KW++FI      +K  S++FQYDPRSY LNFDEGI   
Sbjct: 69  KESWLKKKAKKLKEMSEILAGPKWKNFIRSFSKRSKSSSMQFQYDPRSYELNFDEGI-HR 128

Query: 135 EGRGGRHGFRQPFASPIGLG 153
           E   G   F   FA+P G G
Sbjct: 129 EVDDGFPDFSARFAAPAGAG 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022997532.12.9e-5680.67uncharacterized protein LOC111492425 [Cucurbita maxima][more]
XP_023537514.18.8e-3758.64uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo][more]
XP_022131993.11.5e-3658.64uncharacterized protein LOC111004972 [Momordica charantia][more]
XP_023002532.11.8e-3457.14uncharacterized protein LOC111496346 [Cucurbita maxima][more]
XP_008445245.19.2e-2656.41PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G25240.15.2e-0744.26unknown protein[more]
AT5G62865.11.3e-0535.44unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BC68|A0A1S3BC68_CUCME6.1e-2656.41uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=... [more]
tr|A0A0A0LPP6|A0A0A0LPP6_CUCSA7.9e-2668.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382480 PE=4 SV=1[more]
tr|A0A1Q3AXY5|A0A1Q3AXY5_CEPFO1.4e-1146.59Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04098 PE=4... [more]
tr|A0A2P6PXQ6|A0A2P6PXQ6_ROSCH3.6e-1037.86Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297221 PE=4... [more]
tr|A0A1R3J7E6|A0A1R3J7E6_9ROSI1.8e-0947.50Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18913 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09348-RACarg09348-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR33168:SF13SUBFAMILY NOT NAMEDcoord: 30..150
NoneNo IPR availablePANTHERPTHR33168FAMILY NOT NAMEDcoord: 30..150

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09348Carg03941Silver-seed gourdcarcarB168