Carg09348 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA ATGGCTTCTTCTTCGACTATCGATGATGAAATCTCGCGATCGGAGGAGATCAGAGCGCCTGATCGGATCGAGGAGGGGAATGATCGTGATCGTGATCTTGATCTTGATGAAGTTGGAGTTTCGTATTCCTCCTGTGGATGTTTCTTCGGATTCGGATCGAGACTGTCTCGAAGCAGCAGCGTTCGATGCCAATATCTACTGCTTCGGGAGAACGAAGAAGTGAAGCAGAGTTGGATGATGAAGAAGGTGAAGAGATTCAAGGACATTATAAAAGCTATGGCAGGGCGGAAGTGGAGAAGCTTCATTAATGGAATAGTTAACAAGAGACGGAGTGTGAGGTTTCAGTACGATCCGAGGAGTTACGCTCTGAATTTTGACGAAGGGATCGGAGAAGAAGAGGGCAGAGGTGGACGCCATGGTTTCCGGCAGCCGTTTGCCTCTCCGATCGGATTGGGAACTGGAATGAACACAAGCCAAATATGA MASSSTIDDEISRSEEIRAPDRIEEGNDRDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCQYLLLRENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSYALNFDEGIGEEEGRGGRHGFRQPFASPIGLGTGMNTSQI
BLAST of Carg09348 vs. NCBI nr
Match: XP_022997532.1 (uncharacterized protein LOC111492425 [Cucurbita maxima]) HSP 1 Score: 227.6 bits (579), Expect = 2.9e-56 Identity = 121/150 (80.67%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Carg09348 vs. NCBI nr
Match: XP_023537514.1 (uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.9 bits (411), Expect = 8.8e-37 Identity = 95/162 (58.64%), Postives = 110/162 (67.90%), Query Frame = 0
BLAST of Carg09348 vs. NCBI nr
Match: XP_022131993.1 (uncharacterized protein LOC111004972 [Momordica charantia]) HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36 Identity = 95/162 (58.64%), Postives = 112/162 (69.14%), Query Frame = 0
BLAST of Carg09348 vs. NCBI nr
Match: XP_023002532.1 (uncharacterized protein LOC111496346 [Cucurbita maxima]) HSP 1 Score: 155.2 bits (391), Expect = 1.8e-34 Identity = 96/168 (57.14%), Postives = 110/168 (65.48%), Query Frame = 0
BLAST of Carg09348 vs. NCBI nr
Match: XP_008445245.1 (PREDICTED: uncharacterized protein LOC103488331 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 9.2e-26 Identity = 88/156 (56.41%), Postives = 96/156 (61.54%), Query Frame = 0
BLAST of Carg09348 vs. TAIR10
Match: AT5G25240.1 (unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 5.2e-07 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Carg09348 vs. TAIR10
Match: AT5G62865.1 (unknown protein) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05 Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1S3BC68|A0A1S3BC68_CUCME (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 6.1e-26 Identity = 88/156 (56.41%), Postives = 96/156 (61.54%), Query Frame = 0
BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A0A0LPP6|A0A0A0LPP6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382480 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.9e-26 Identity = 75/110 (68.18%), Postives = 80/110 (72.73%), Query Frame = 0
BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1Q3AXY5|A0A1Q3AXY5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04098 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A2P6PXQ6|A0A2P6PXQ6_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297221 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.6e-10 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of Carg09348 vs. TrEMBL
Match: tr|A0A1R3J7E6|A0A1R3J7E6_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18913 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09 Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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