Carg09257 (gene) Silver-seed gourd

Overview
NameCarg09257
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMADS-box transcription factor
LocationCucurbita_argyrosperma_scaffold_018 : 242241 .. 243436 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAATACTCGAACGATACGAGAGATATTCTTTCGTGGGTAAGCAGCAAACCGCAGCTTCTATATCGAAATTTTCTCATGAAGATTTGACACTCGAGTATCACTGACTCAAGTCGAAAATCGAACTCTTACAACGAAACAACAGGTACGTTATATACCAATGTCTTAAACGTCGACACCGATAGATTTTCGCATTCACATTAGCAACAGTTTTCATGATATCGAGACGTCAACGAAATTTAATACCCGTCATCAAATCGCATCGAATTTCAAAGCTTTCAAAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGATTTCAGTCATTACATGGGAGAAGATTTGGATTCAATGAGCGTCCAAGAACTGCATAACTTGGAACAACAAATGGACACAGCACTGAAACATGTTCGATCCAGAAAAGTAGGGTTGTTCGTATTGTCCGATGTTTTTGTTTGGATTTATTTATTTATTTACCGTTTTTAATTTTATTTTTAATTATTGATTAATTATTTTATATATTTATTGGATTATTTTTCAGAACCAACTTATATGTGATTCCATCTTACACTTCAAAGAAAGGCAAATCCTCTTTATTTTCCCTTTATTTTTATTTTTTTTAAAAAAAAACAGTTTATTTATTAATTATTATTATTATTTCATTAATTTATTTATTTTCTTTTATATATATATATATATATACAGGAAAGAACAATACAGGAGCAAAATTCCCTACTGGCAAAGCAGGTGAGTTTTAAGCACTTTTTAAAAGCGATTCTAAGAAAAACTGATCGATCGATTTTTATTTATCTCGAAACATGAGACCTTAGAAGACAAAAAGAAATCACGAAATGGCATATTTTATATTTGAACGATAGCGACTGTTCGGGTATTATATACAAATTTTTGAACCCGATAGGAGAACAACGGGTGAACGGAAGGGAAAAGATTAACGATAAACGTAATCTGTTAGATTAAGCTTTTGAGTTTAATGATAGTTTACGAGTAATTGTGATTATAATTACATTTTTATTTACGAATTTGTGAGAAAAATAAGATCAAGGAGAAGGAGAAGAGTGTAGCAATGGCAGAAGAGGCAGAATGGGAAGAGCAGCAACACCATTGCTACAATGCCTTGTCTTTCTTGTACCAATCAGCTCCTAATCATCCCTCTCTAAACATTGGGTAA

mRNA sequence

ATGGAGAAAATACTCGAACGATACGAGAGATATTCTTTCGTGGGTAAGCAGCAAACCGCAGCTTCTATATCGAAATTTTCTCATGAAGATTTGACACTCGATCATTACATGGGAGAAGATTTGGATTCAATGAGCGTCCAAGAACTGCATAACTTGGAACAACAAATGGACACAGCACTGAAACATGTTCGATCCAGAAAAGAAAGAACAATACAGGAGCAAAATTCCCTACTGGCAAAGCAGAAAAATAAGATCAAGGAGAAGGAGAAGAGTGTAGCAATGGCAGAAGAGGCAGAATGGGAAGAGCAGCAACACCATTGCTACAATGCCTTGTCTTTCTTGTACCAATCAGCTCCTAATCATCCCTCTCTAAACATTGGGTAA

Coding sequence (CDS)

ATGGAGAAAATACTCGAACGATACGAGAGATATTCTTTCGTGGGTAAGCAGCAAACCGCAGCTTCTATATCGAAATTTTCTCATGAAGATTTGACACTCGATCATTACATGGGAGAAGATTTGGATTCAATGAGCGTCCAAGAACTGCATAACTTGGAACAACAAATGGACACAGCACTGAAACATGTTCGATCCAGAAAAGAAAGAACAATACAGGAGCAAAATTCCCTACTGGCAAAGCAGAAAAATAAGATCAAGGAGAAGGAGAAGAGTGTAGCAATGGCAGAAGAGGCAGAATGGGAAGAGCAGCAACACCATTGCTACAATGCCTTGTCTTTCTTGTACCAATCAGCTCCTAATCATCCCTCTCTAAACATTGGGTAA

Protein sequence

MEKILERYERYSFVGKQQTAASISKFSHEDLTLDHYMGEDLDSMSVQELHNLEQQMDTALKHVRSRKERTIQEQNSLLAKQKNKIKEKEKSVAMAEEAEWEEQQHHCYNALSFLYQSAPNHPSLNIG
Homology
[Close]
BLAST of Carg09257 vs. NCBI nr
Match: XP_023547090.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-41
Identity = 102/157 (64.97%), Postives = 109/157 (69.43%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYSFVGKQQTAAS+SKFS EDLTL+                HYMGEDLDS+
Sbjct: 63  MEKILERYERYSFVGKQQTAASVSKFSQEDLTLEYYRLKSKIELLQRNNSHYMGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQXXXXXXXXX 120
           SV+ELHNLE+QMDTALKHVRS              RKERTIQEQNSLLAK+         
Sbjct: 123 SVKELHNLEEQMDTALKHVRSRKNQLICDSISILQRKERTIQEQNSLLAKE---IKEKEK 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
                  AEWEEQQHHCYNALSFLYQSAP+ PSLNIG
Sbjct: 183 SVAMAEEAEWEEQQHHCYNALSFLYQSAPHQPSLNIG 216

[Close]
BLAST of Carg09257 vs. NCBI nr
Match: XP_008445435.1 (PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 7.0e-29
Identity = 85/157 (54.14%), Postives = 97/157 (61.78%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYSFVG+QQ AAS S FSHE+ TL+                HY+GEDLDS+
Sbjct: 63  MEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRSRKE--------------RTIQEQNSLLAKQXXXXXXXXX 120
           SV+EL NLEQQ+DTALKHVRSRK               RTI+E N+ LAK+         
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKE---IKEKEK 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
                  AEWE QQHH Y+ALSFL+   P HPSLNIG
Sbjct: 183 SVALAQQAEWEHQQHHGYSALSFLFPPPP-HPSLNIG 215

[Close]
BLAST of Carg09257 vs. NCBI nr
Match: XP_023002154.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima])

HSP 1 Score: 134.0 bits (336), Expect = 3.5e-28
Identity = 95/157 (60.51%), Postives = 107/157 (68.15%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYS+VG+QQ AA+ S+FS E+ TL+                HYMGEDLDS+
Sbjct: 63  MEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQXXXXXXXXX 120
           SV+EL NLEQQ+DTALKHVRS              RKER IQEQN+LLAKQ       XX
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQ---IKEKXX 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
           XXXXXXX   E+QQ H YNALSFL+ SAP HPSLNIG
Sbjct: 183 XXXXXXXXXXEQQQQHGYNALSFLFPSAP-HPSLNIG 215

[Close]
BLAST of Carg09257 vs. NCBI nr
Match: XP_022951531.1 (truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_023537553.1 truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.1 bits (318), Expect = 4.3e-26
Identity = 95/157 (60.51%), Postives = 107/157 (68.15%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYS+VG+QQ AA+ S+FS E+ TL+                HYMGEDLDS+
Sbjct: 63  MEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQXXXXXXXXX 120
           SV+EL NLEQQ+DTALKHVRS              RKER IQEQN+LLAKQ    XXXXX
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMHDSISALQRKERAIQEQNALLAKQIKEKXXXXX 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
           XXXXXXX    +   H YNALSFL+ SAP HPSLNIG
Sbjct: 183 XXXXXXXXXXXQ---HGYNALSFLFPSAP-HPSLNIG 215

[Close]
BLAST of Carg09257 vs. NCBI nr
Match: XP_022132007.1 (truncated transcription factor CAULIFLOWER A-like [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19
Identity = 63/111 (56.76%), Postives = 74/111 (66.67%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYS+VG+QQ A S ++FS E+ TL+                HYMGEDLDS+
Sbjct: 63  MEKILERYERYSYVGRQQIALSETEFSQENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           SV+EL NLEQQ+DTALKH+RS              RKER IQEQN+LLAKQ
Sbjct: 123 SVKELQNLEQQIDTALKHIRSRKNQLMYDSISALQRKERAIQEQNALLAKQ 173

[Close]
BLAST of Carg09257 vs. TAIR10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 49/109 (44.95%), Postives = 62/109 (56.88%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASI--------------SKFSHEDLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A                 +K    +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRSR--------------KERTIQEQNSLLAKQ 82
           +EL NLEQQ+DTALKH+R+R              KE+ IQEQNS+L+KQ
Sbjct: 123 KELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQ 171

[Close]
BLAST of Carg09257 vs. TAIR10
Match: AT1G26310.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-13
Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEK+LERYERYS+  +Q  A      +  + +++                HY+GE+L+ M
Sbjct: 63  MEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPM 122

Query: 61  SVQELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           S+++L NLEQQ++TALKH+RS              RKE+ IQE+NS+L KQ
Sbjct: 123 SLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQ 173

[Close]
BLAST of Carg09257 vs. TAIR10
Match: AT5G60910.1 (AGAMOUS-like 8)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLDH----------------YMGEDLDSM 60
           ME+ILERY+RY +  KQ     +S+   E+  L+H                +MGEDLDS+
Sbjct: 63  MERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRSRKERTIQEQNSLLAKQ 82
           S++EL +LE Q+D A+K +RSRK + + E  S L K+
Sbjct: 123 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKK 157

[Close]
BLAST of Carg09257 vs. TAIR10
Match: AT3G30260.1 (AGAMOUS-like 79)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 32/95 (33.68%), Postives = 52/95 (54.74%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQ----------QTAASISKFSHE----DLTLDHYMGEDLDSMSV 60
           ME+IL+RYER ++ G+           + +   SK          +L H  GE++D +S+
Sbjct: 63  MERILDRYERSAYAGQDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLSI 122

Query: 61  QELHNLEQQMDTALKHVRSRKERTIQEQNSLLAKQ 82
           ++L  +E Q+DTALK  RSRK + + E  + L K+
Sbjct: 123 RDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKK 157

[Close]
BLAST of Carg09257 vs. TAIR10
Match: AT4G11880.1 (AGAMOUS-like 14)

HSP 1 Score: 42.7 bits (99), Expect = 1.9e-04
Identity = 21/66 (31.82%), Postives = 39/66 (59.09%), Query Frame = 0 

Query: 16  KQQTAASISKFSHEDLTLDHYMGEDLDSMSVQELHNLEQQMDTALKHVRSRKERTIQEQN 75
           K +T     K  H +++    MGE LD+ S++EL  LE Q+D +L  +R++K + ++E+ 
Sbjct: 91  KDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLLREET 150

Query: 76  SLLAKQ 82
             L ++
Sbjct: 151 EKLKEK 156

[Close]
BLAST of Carg09257 vs. Swiss-Prot
Match: sp|Q96356|2AP1_BRAOT (Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var. italica OX=36774 GN=2AP1 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14
Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAA---SISKFSHE-----------DLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A    S + +S E           +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           +EL NLEQQ+DTALKH+RS              RKE+ IQEQNS+L+KQ
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQ 171

[Close]
BLAST of Carg09257 vs. Swiss-Prot
Match: sp|B4YPW6|AP1A_BRAOA (Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. alboglabra OX=3714 GN=AP1A PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14
Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAA---SISKFSHE-----------DLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A    S + +S E           +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           +EL NLEQQ+DTALKH+RS              RKE+ IQEQNS+L+KQ
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQ 171

[Close]
BLAST of Carg09257 vs. Swiss-Prot
Match: sp|Q8GTF5|AP1A_BRAOB (Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. botrytis OX=3715 GN=AP1A PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-14
Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAA---SISKFSHE-----------DLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A    S + +S E           +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDSNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           +EL NLEQQ+DTALKH+RS              RKE+ IQEQNS+L+KQ
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIQEQNSMLSKQ 171

[Close]
BLAST of Carg09257 vs. Swiss-Prot
Match: sp|Q96355|1AP1_BRAOT (Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 GN=1AP1 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.7e-14
Identity = 53/133 (39.85%), Postives = 68/133 (51.13%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASI--------------SKFSHEDLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A                 +K    +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQXXXXXXXXXXX 106
           +EL NLEQQ+DTALKH+RS              RKE+ IQEQNS+L+KQ           
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQ----IKEREKV 182

[Close]
BLAST of Carg09257 vs. Swiss-Prot
Match: sp|Q39371|3AP1_BRAOL (Floral homeotic protein APETALA 1 OS=Brassica oleracea OX=3712 GN=AP1 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.7e-14
Identity = 50/109 (45.87%), Postives = 62/109 (56.88%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASI--------------SKFSHEDLTLDHYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A                 +K    +    HY+GEDL +MS 
Sbjct: 63  MEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSP 122

Query: 61  QELHNLEQQMDTALKHVRS--------------RKERTIQEQNSLLAKQ 82
           +EL NLEQQ+DTALKH+RS              RKE+ IQEQNS+L+KQ
Sbjct: 123 KELQNLEQQLDTALKHIRSRKNQLMYESINELQRKEKAIQEQNSMLSKQ 171

[Close]
BLAST of Carg09257 vs. TrEMBL
Match: tr|A0A1S3BCQ3|A0A1S3BCQ3_CUCME (truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC103488455 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-29
Identity = 85/157 (54.14%), Postives = 97/157 (61.78%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYSFVG+QQ AAS S FSHE+ TL+                HY+GEDLDS+
Sbjct: 63  MEKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRSRKE--------------RTIQEQNSLLAKQXXXXXXXXX 120
           SV+EL NLEQQ+DTALKHVRSRK               RTI+E N+ LAK+         
Sbjct: 123 SVKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKE---IKEKEK 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
                  AEWE QQHH Y+ALSFL+   P HPSLNIG
Sbjct: 183 SVALAQQAEWEHQQHHGYSALSFLFPPPP-HPSLNIG 215

[Close]
BLAST of Carg09257 vs. TrEMBL
Match: tr|A0A0A0KGY7|A0A0A0KGY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 62/111 (55.86%), Postives = 72/111 (64.86%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYSFVG+QQ AAS S+FS+E+ TL+                HYMGEDLDS+
Sbjct: 1   MEKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSL 60

Query: 61  SVQELHNLEQQMDTALKHVRSRKE--------------RTIQEQNSLLAKQ 82
           SV+EL NLEQQ+DTALKHVR+RK               R I+E N  LAKQ
Sbjct: 61  SVKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQ 111

[Close]
BLAST of Carg09257 vs. TrEMBL
Match: tr|A0A2C9WH13|A0A2C9WH13_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G025600 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.1e-17
Identity = 69/157 (43.95%), Postives = 86/157 (54.78%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYS+  +Q TA  ++  S E+ TL+                HYMGED+DS+
Sbjct: 63  MEKILERYERYSYAERQLTATDLN--SQENWTLEYNRLKAKVELLQRNHRHYMGEDIDSL 122

Query: 61  SVQELHNLEQQMDTALKHVRSR--------------KERTIQEQNSLLAKQXXXXXXXXX 120
           S++EL NLEQQ+DTALKH+R+R              KE+ IQEQN++LAKQ         
Sbjct: 123 SMKELQNLEQQLDTALKHIRTRKNQLMYESISELQKKEKAIQEQNNMLAKQ-----IKEN 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
                  A W EQ +H  N   FL Q  P  P LNIG
Sbjct: 183 EKAVAQQALW-EQHNHGTNMSPFLLQQPP-LPCLNIG 210

[Close]
BLAST of Carg09257 vs. TrEMBL
Match: tr|A0A182BPB8|A0A182BPB8_9ROSI (APETALA1 OS=Plukenetia volubilis OX=316893 GN=AP1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-16
Identity = 65/157 (41.40%), Postives = 85/157 (54.14%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASISKFSHEDLTLD----------------HYMGEDLDSM 60
           MEKILERYERYS+  +Q TA  ++  S E+ TL+                HY+GE+LDSM
Sbjct: 63  MEKILERYERYSYAERQLTATDLN--SQENWTLEYNRLKAKVELLQRNHRHYLGEELDSM 122

Query: 61  SVQELHNLEQQMDTALKHVRSR--------------KERTIQEQNSLLAKQXXXXXXXXX 120
           +++EL NLE Q+D ALKH+RSR              KER IQEQN++LAKQ         
Sbjct: 123 TLKELQNLEHQLDNALKHIRSRKNQLMYESISELQKKERAIQEQNNMLAKQ-----IKEK 182

Query: 121 XXXXXXXAEWEEQQHHCYNALSFLYQSAPNHPSLNIG 128
                  A+WE+Q H    ++S    + P  P LNIG
Sbjct: 183 EKKVAQQAQWEQQNH--MTSMSPFLLAQPPLPCLNIG 210

[Close]
BLAST of Carg09257 vs. TrEMBL
Match: tr|A0A1U8M7T9|A0A1U8M7T9_GOSHI (truncated transcription factor CAULIFLOWER D-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107934869 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.5e-16
Identity = 62/144 (43.06%), Postives = 81/144 (56.25%), Query Frame = 0 

Query: 1   MEKILERYERYSFVGKQQTAASIS-------KFSHEDLTLD-------HYMGEDLDSMSV 60
           MEKILERYERYS+  +Q  A           +++     +D       HYMGEDLDS+S+
Sbjct: 63  MEKILERYERYSYAERQLVATESQPQGNWSMEYNRLKAKVDLLQKNHRHYMGEDLDSLSL 122

Query: 61  QELHNLEQQMDTALKHVRS--RKERTIQEQNSLLAKQXXXXXXXXXXXXXXXXAEWEEQQ 120
           +EL NLEQQ+DTA+KH+RS  RKE+ IQEQN++LAKQ                ++W +QQ
Sbjct: 123 KELQNLEQQLDTAIKHIRSKKRKEKAIQEQNAMLAKQ---IKDREKTVAQAQQSQWGQQQ 182

Query: 121 HHC-YNALSFLYQSAPNHPSLNIG 128
                N  +      P HP LNIG
Sbjct: 183 QQLGLNTPTSFLLPQPPHPCLNIG 203

The following BLAST results are available for this feature:
BLAST of Carg09257 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547090.16.1e-4164.97truncated transcription factor CAULIFLOWER A-like [Cucurbita pepo subsp. pepo][more]
XP_008445435.17.0e-2954.14PREDICTED: truncated transcription factor CAULIFLOWER A [Cucumis melo][more]
XP_023002154.13.5e-2860.51truncated transcription factor CAULIFLOWER A-like [Cucurbita maxima][more]
XP_022951531.14.3e-2660.51truncated transcription factor CAULIFLOWER A-like [Cucurbita moschata] >XP_02353... [more]
XP_022132007.12.3e-1956.76truncated transcription factor CAULIFLOWER A-like [Momordica charantia][more]
BLAST of Carg09257 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G69120.11.2e-1444.95K-box region and MADS-box transcription factor family protein [more]
AT1G26310.12.3e-1339.64K-box region and MADS-box transcription factor family protein [more]
AT5G60910.11.4e-1040.21AGAMOUS-like 8[more]
AT3G30260.11.6e-0633.68AGAMOUS-like 79[more]
AT4G11880.11.9e-0431.82AGAMOUS-like 14[more]
BLAST of Carg09257 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96356|2AP1_BRAOT7.4e-1447.71Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var. italica OX=36774 G... [more]
sp|B4YPW6|AP1A_BRAOA7.4e-1447.71Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. alboglabra OX=3714... [more]
sp|Q8GTF5|AP1A_BRAOB7.4e-1447.71Floral homeotic protein APETALA 1 A OS=Brassica oleracea var. botrytis OX=3715 G... [more]
sp|Q96355|1AP1_BRAOT9.7e-1439.85Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica OX=36774 G... [more]
sp|Q39371|3AP1_BRAOL9.7e-1445.87Floral homeotic protein APETALA 1 OS=Brassica oleracea OX=3712 GN=AP1 PE=2 SV=1[more]
BLAST of Carg09257 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BCQ3|A0A1S3BCQ3_CUCME4.6e-2954.14truncated transcription factor CAULIFLOWER A OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A0A0KGY7|A0A0A0KGY7_CUCSA2.2e-1855.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367090 PE=4 SV=1[more]
tr|A0A2C9WH13|A0A2C9WH13_MANES9.1e-1743.95Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G025600 PE=4 SV=... [more]
tr|A0A182BPB8|A0A182BPB8_9ROSI3.5e-1641.40APETALA1 OS=Plukenetia volubilis OX=316893 GN=AP1 PE=2 SV=1[more]
tr|A0A1U8M7T9|A0A1U8M7T9_GOSHI4.5e-1643.06truncated transcription factor CAULIFLOWER D-like isoform X2 OS=Gossypium hirsut... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR002487TF_Kbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09257-RACarg09257-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..98
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..127
NoneNo IPR availablePANTHERPTHR11945:SF244FLORAL HOMEOTIC PROTEIN APETALA 1-RELATEDcoord: 1..127
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 33..90
e-value: 7.9E-15
score: 54.7
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 12..106
score: 10.199