Cp4.1LG07g00830 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g00830
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MADS-box transcription factor
Location	Cp4.1LG07 : 459230 .. 470274 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATGGGAAGAGGTAAGGTGGAGCTGAAGAAGATAGAGAACAAAATAAACCGACAGGTAACCTTCACAAAACGAAGAAATGGTCTTCTTAAAAAGGCTTATGAGCTCTCCATTTTGTGTGATGCTGAGGTGGCACTCATCGTCTTCTCCACCGGTGGCAAGCTCTATGAATTCTCCAGCTCTTCCAGGCATGTCTCGATTCGAATCTCTAACCTTTTTTGTTCGGAGCGTTCGTGTAGCTCCGAGCTTGATTTGATCTGTTTATATCGAACTCGAGACGGGTTCTTTTCGTTAACCAATTGCAGTATAGCCAAGACGTTGGAGAGGTATCAAAGACATAGCTATGGAGCTTTGGCAGCCTCCCATCATCTCAAGGACACCGAGGTCATTTCTCGTCTTTGCTCGATTAGATTTAGTTATATAAAATGGGACCCGTTTCAATTATGTTCGGTAAAAGTGATTTTAACTATTTCAAAATTACTCTCGTGCCCTTGGTCGGAATGTTTTTGGATACAGAAATGGTACGAGGAGTATTTGAAGCTGAAAAAAGAAGTGGAAGGTCTGCAGCATTCACAGAGGTGGCGCAACCCTCCTCCTCCGCCGTGGGAGGATCTTCTTCAAGCTGTTCTTCATTCTTATTTAATTTTTTAATTTTTTTTTTTAAAAAAACCCTTTTTTCTCTTAATTAATTAATTAATTATTATTGTGTTATGTAGACGAATTCTTGGAGAAGAATTGGAAGATTTGGAGACGAACGAATTGGACCAACTCGAGATTCAATTGGAAACGTCTCTAAAGCAAATCAGGTTCACTAAGGTAAAATTAATGTTCGAGTTCAATGAACGGAGGTAGCGAATTCGAACCCGATCTTGTGATCTAGGGCACAAATTTTATGACCGTTGAGTTATGCTCGGGATTTTTTATTTTATTAATTATTGTGAATTATTGAAATTTTGCAGAACCAAACCGTGTTTGATCAGTTATCTGAGCTAAAAAAGAAGGTAATTTTTTTTTTTTACCGTTGGATGTTTGAAAGTAAATGGGTTAATTTTCTTCATTTGTTTATAGGAAGAATTACTGCTGGAAACTAATCAAGCTTTGAGGAGGAAGGTATGGAATAATTAAGTGCACTAGTTAATTTATTATGAGATTTAATATTTATTTGGTTGAAATTAGGTTATATATATTAAAAAAAAAAACCCAGAATTGATGATGACGTGATTTTTTTTACTGCACTGAGTTACCTCTAAAACTAGTGGTAGGTAAAAAAATAATCTTTATTATTTAACCTATTGGTCCGACTTGGACCCGCTAGAAATGAGATGGGTAATTCTAGTTTCGGTATGAAAGTCCCACATGAGCCACGAGCACTTATGCTCAAAGTGGACAATATCATATCATTGTGGAGAGTCATGTTCACTGACATGGTACCAGAGCCCATAGTATCAAAGTCATACCCTAAACTTAGCCATGTCAATAGAATCTTCAAAAGAAAAAGCAGTCGTCGAGCCTCAATTAAGGGGAGGTGTTGGATGAAAGTCCCATATCGGTTAATTTAGCGAGAGTCGTGATCCTGCTCGGTAGACACGTGTTTTGAGAATTTAATGTCAATTTACTCGTATTTATAACGTAGGGAGGAAACATCGAACCTTCAACCTGACAGAATGTAGTAAACGTTTTATTAAATTCGATACAAATCGTAAACCCACCAACGAAATCGAACAAATAATCGAAAACTCGAGCTTCACGAACCTAGATTCATTAAAACCGTGACCCGAACACCCTAACCCTAATATGTGGCTATGTATTCCTTTGAATGGGCAGTTGGAAGAAAGCAGTGCAGCTCTTCATTCATCATGGGAAGCTTCGGAACCCAACAATTTGCATTACTGTGGACAACCTGAGGCCTTTCTTCAAGGCAATAATATTGCATTGGAAAATAGGTAAAATTTTATATTTATTATTATAAAATAAATAATTAATTAATTAAATAAATAAAACCCTTTATTTATTTATTTTATATAAATTTAAATATCTAATTTAATTTATGGGTTATTTATAGTTACAATCCAGCAGAGGTTTCAAATCAAGAAAACGCCATAAACTCTGAGCCAGAAGGTAACGAGTTGCCTTCGCATTGGATGATGCTTTGATCTTATCTTAAAAAAATATATTACATTAAACCATACTCTATTTCAACCCATTGTGACAATAATATATGTAGTAATTAATACATGAACCATATATGATCTAATGCTCGATTATCATCTAATTTTTTGTTCTCGGGTTCCGTTGAAATATGGTTACGTTGTTTCATTTCTTCGAGTGAAACCTGATTTTGGATAACGAGATTTGAACCTCTGATCTTGTGATCGAGAGAAATTCACTTTGACTTTTGATTTCTCTGGTTGACTTTTGGTCTTTTTGATTGAACGTTGCTAAAAGTATGATAAAAAAAATTAATTCTCGGTTGTATGACTGTATCACAAATCTTAGATATCGACCTCAGTACAATTTAACCGATTCTGACATTAAATTTGTCATCAATGAATCAAAAGTTAGAATCTCGACACGCCGGATTGGCTATTAAAAAAAATAATGGTTTCTAAAATTATAGGATAAAAAATAAAATATTCATTAATTAAAAACTTGAGCTACTCATTTTTTACCATAAATGTAGTCAAAACCTTCCACAATAATTCAAGAATCCAATGAAATTATTTCATAGTGTACAAATATATATATAATAAAAGGGAATAAAAAAAATATAATACAGTTTTTGTGATGTCCCACATTGATTGGGGAGGAAAACAAACCACCATTTATAACTGTGTGAAAACCTTCCTCTAGCAGACGCATTTTAAAGCCTTGAGGGGAATCCCGAAAGGGAAAGCTCAAAGAGGGCAATATCTGCTAGTGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACCGGACGATGTGTCAGCCTTCTCGCTATTTCCCAAAGGGGGGTAGACACGAGACAGTGTGCTAGTAAGGATGCTAGGCCCCAAACGGGGGTGGATTTGGGGCGGTCCCACATCGATTGAAGGAAGGAAAGAATGTCAGCGAGGACGCTGGGCCCTGAGGGGGGGGTGGATTATGATGTCCCATATTGGTTGGAGAGGAGAACAAACCGCCCCAAATCGATTGAAGGAAGGAAAGAATGTCAGCGAGGACGCTGGGCCCTGAGGGGGGTGGATTATGATGTCCCATATTGGTTGGGGAGGAGAACAAACCACCATTTACAAGGGTGTGGAAACCTTCCCCTAGCACGTTTTAAAGCCTTGAGGAGAATCCCGAAAGGGAAAGCCTTTATAAGGGTGTGGAAACCTTCCTCGAACACGTTTTAAACCCTTGAGGGGAATCCCGAACAGGAAAGCCCAAAGAGGACAGCGGTGGATCTGGGTTGTTACAGTTTTTGACTTGATTTAATTAATGGGGTGAAATCTCTTTCCATACCTTCCCTAGCACGTTTTGAGGGGAATCCCAAAGACGACAATATCTACTAGTGGTGGATCCAGGTCGTTACATCTCTTTCCATACCTTCCCTAGCACGTTTTGAGTGAAATCTCAAAGACGACAATATCTACTAGTGGTGGATCTGGGTTGTTACATCTCTTTCCATACCTTCCCTAGCACGTTTTGAGGGGAATCCCGAAAAGGAAATCTCAAAGAGGACAATATCTACTAGCGGTGGATCTTGGTCGTTACAGTTTTTTACCTAATTTAATTAATGGGGTGAAATCTCTTCCCACTCCTTCGTAGATTTACGTATAAATAAAAATTTCACATTCTTTAAATTAAATAAACATGTTGATATTGAAATTTAATAAAAACAAAAGCTTGAATTAAATAAACATGGTAAAAAAAAGTTACTGCATTTATTAAAATTAAAAACTTTGAAGGGGGTGGGGAGTTTAATAAATGCAATACAGATGTAAATTTAATCCATAAAATTGAACATACGAATTAAATGAAATAATTTGTACTAAATGCTGGTGAATGATTGTAGAAATAATTAAATTCGTATATCAAAATTTAACTCTTATTTCCAGCTTTTAACGTTATTTTTTTTAATTTTCATTTATTTTGGCATGATTTTATAATTCTTGTTGATATTATTAATTTAATTATCGATATGTCTATTAAATAACCAAAATAGTGTAATAAATTAGACATAATAAGACAAAATAAAGTGCATTACATTACAAAAATAGATTTGATACGTACGTTTGTACATCTCACTTTATTTTTTGTTCAATTATTATCATTATTATTTGTCTATCATTTTATTTTATTTTTATTTTAATAAACTCTTGTAATTTTTAATTTCATACTTAAAAAAAAAAAAACAAAAACAAAAACAAAAACAAAAACAAAGCAACAAATCTTACTGAATTTCATAGCATTGTGAAGTACATCACTAATAGAAAAGTTTTAAATCAATTNTAAACTCTTGTAATTTTTAATTTCATACTTAAAAAAAAAAAACAACAACAAAAACAAAGCAACAAATCTTACATCACTAATAGAAAAGTTTTAAATCAATTTCATATTGACCTATTTAATTTGTCGGGTTGGGTTCACAGGGTCCCACCGTGAACGGAATGGAGAATTCTCGTTTAAATTAAGAACGAGAAGGAAGCGGGAATAATTTCATATTGACCTATTTAATTTGTCGGGTTGGGTTCACAGGTTCCACCTTGAACGAAATGGAGAATTCCCGTTTAAATTAAGAATAAGAAGGAAGCGGGAATAGATTTTTCCTCGTTAGATAAACGAGTGGAAGATGGAAAGTGTATTTCTCTCTTCATCCCCGACACAGTCCAAATCCGTGCTCCCATTGACTTTATATATATAAATATATCTAGATATGTATAAGTCACGAACATATTTTATTATATAGTTTGTTTACAATTTTCGCTCGTTGTTTTTTATTGAATTTGTTATTTATTTATTTATTTATGAATAATTATAGATTGATTTGTGTTTGTTTGTGAACTTTTAATAATATTTTTATGTAAGATTGTATCCTAATAATTATAAATTGTAAATAAATAAAACTAAAAAAAATTTGACAACCCAACCCGAAAATAGAGGTTGGGTTGAGTTGTGAAAAGTTTCGGGTTAGGTAAAAAAAAATCCCCCAACCGAACCTAACCGGAACCATGTACACCGTTACTAGGATACACGTTTTAAAATCGTAAGGCCAAAGTAGACAATATCTGCTAGCGGCGAGCTTGGGCTGTCACATGAAGATGAAAATAAAAGGCTACCCGTTTTTGTCCCGCTTCATGGACATCTTTCGCAATTTACAACGTCGGAAAGTGATTTATTCGTGCTCGTTTCAATCCAAATAATAAAAAGATTAAAATAAATAATGCAAATTTAATTCGAAATTAAGGGTTTAAAAATAAAAATAAAAAATAAAAAATAAAAATTGATGGTCCATCCAAATAAATAAATTTCTCCATTATTATGCGTTTTGTGGTCTAGGTCTTATACGTAAACAGGCGCCGTCAACACAAACCATAAACGCCCTTCTCTATAATAGAAATGGAAATTAAAATAAAATAAATAAAAAAATAAATACTTTAATCTGTATCCGTACAAGCGACCCCCACATCTGTTAACGATACACCGAGTTCTTCATCTTTCATTCACCCTATCACCTCTCGACAGCACTTCACCAAAAACCACTTTTCTCCAAAACCACTTACCGNTTCAATCCAAATAATAAAAAGATTAAAATAAATAATGCAAATTTAATTCGAAATTAAGGGTTTAAAAATAAAAATAAAAAATAAAAAATAAAAATTGATGGTCCATCCAAATAAATAAATTTCTCCATTATTATGCGTTTTGTGGTCTAGGTCTTATACGTAAACAGGCGCCGTCAACACAAACCATAAACGCCCTTCTCTATAATAGAAATGGAAATTAAAATAAAATAAATAAATAAAATAAATAAATAAATACTTTAATCTGTATCCGTACAAGCGACCCCCACATCTGTTAACGATACACCGAGTTCTTCATCTTTCGTTCACCCTATCACCTCTCGACAGCACTTCACCAAAAACCACTTTTTTCCAAAACCACTTACCGGCTTTGAAAACCACTTTTGTTTTCCTCCAAAACCACTTTTTTTCCTCTTTCTCTCTCTCCCACCCTGATTCCTTATAACAATAGGCAACAACAGGCAGCAACAGGCAGCAACCCATTTCCGAAAACCTAATCTTTTTTTCATTTCATTCGGACCCCTTATCTTTCTGTTCTTGTGGTTTGTTTCCCTTTTTCGTGTGTTGTTTTGGGAACTGGGGTTGGTTTGAAAACACAGAGAAAAAAGAAGGGTTTTTAAGCAAAAAAAAAGGGGTTCTTTTGGGGTTGGATTGTAAAAATGGGAAGAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGGTCACCCCCACATTATTATTATTATTTTTGTGTCTTTTTTTTGGTAAATTTAATGTTTTTGTTGTGTTTTTAGGGTTTTTAATGCAAACCCATTTAATTTCTTCATGTTTTCTATAATGGGTCTCTCTTATTTTTTTTTTTTTTTTTTTTTTACCTTAAATTTCTTTTAAATTTTGGTTATAAGAATGTGTTCATCTTTGGATTCTCTCCTTTTCCCTCCATGGCCCCAAATATGGCTATTTCTTCTGATTTTCTGATGCTCACTGCCACTTAACTCCCACTTCCTTTATCGATTAGGGTTTTTCTTCGTATCGTCATGCTCTATTCGCTTTAACTTTTGGGTTCGGTGGTGATTTCGTTACACCGATCTAGCAAATTCTATAAAACTTTCGTCTCCGACCCATTAATTTGTTTTTTTTTTCTCTCTCTCTACACGTAACACCGACTTTTTTCTTTAAATTCAATGAAATCGTAAAATCGAGCGAAAAGTTACAATGAGACTTGGGTTTTCCTTACGGCTTGTCATGATCGAGTACCTAAGCTTCTGGGTTGAGTTGTGATTTAATGAAAGCGTGATGCTTTCTATGTTAGCTCGAGCGGGTTCTTTGATTTCGATCTTGGATCGAAATGTTTTGGGTTGTTTTGAAATGGGTTGTTTTCGATTGAGTACAATGAGGCTTGAGTTTTCCTTATGGCTTGTTTGATCGAGTACTTAAGCTAGTGGGTTGAGTCGTGATTTAATTAGATCTCCATTTAAGGAAAGCTTGAAACTTTAGCTTACTTTCTATGTTAGCTCGAGCGGGTTCTTTGCTTTCGATATTGGATCGAAATGTTTTGGATTTTTTTGAAATGGGTTATTTTCGATCGAGTACAATGAGGCTCGAGTTTTCCTTAAGGCTTGTTATGATCTAGTACTGAAGCTAGTGGGTTGAGTCGTGATTTAATTAGATCTCGATTTAATGAAAGCTTGAAACTTTTAGCTTGCTTTCTACGTTAACTCGAGCGGGTTCTTCGATTTCGATCTTGGATCGAAACGTTTTGGATTTTTTGAAATGGGTTATTTTTGTATAGTGGAATTGATAATTTTCCCCATGAATTTGAGCTTAGGTTTTGTACTTGTGAAGTGGTTGGTAGCAGAACAAAAGAAAGTGAACAGTTATTGAAGCATGGGAATGAGGATCTAGTTTCCTCTACCCATTTATTTATTTGCATGTGTTCTTCATATACAGTAGTTAGACAGTGGTTTGGTAATGATTTTTAAGCCTATAGTTAATTATATATATATATATTTTGAATAGCTTATATTAAAAATTATAATGTGTATGAAATTCTTAGGGTTTGGAAGTTAAAGGTAAGTCAAATATTGTGTAACATAATGTGTTAAATTGAATTATGACAAAAATAATGAAGTAATTTGAGGAACAGAACAGTAACCTAGTTATCTAGACATGTTTTTTTAATGTTATTATTGTTTTATTTGTAAATTAATAGGTAAATATTGTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTATTGTTCTCTATAATTTATTATTTTTCAACTAGTTTATTTAAAAATATAATATTATTGAGAAAACAATTTGAAAATAAGGAACATATGATGTTTTGAAATTAATCAAAGGTTTGTCGGGGGATTTTTATGTTTTTCGTTTATTATTATTATTTTTTGTAGAAAGTTAAAAATATTCAAGAAACTTAACTTTTATAAGCAAATAATTACTGTTTCAATTCTCAAAATTAATTTAAAAAAAAAACTATTTTTATTAATGATTTTGAAAATTGTTTGAAAATATTAAGCAAAAAAACTTAGCTATATTTCTGGAAAACATCCTTAAAATTTACATGTGTTTTATAATCTCTTATGTTTCTCTGTCAAAAAAACAAAGAACGAAATGATATTACAATTTTTTTTTTTACGTCATTATAGTACATTATTTGTCAATTTGAGCATAATTCAATTAGTTAAGATATATATTATTGATCGAGAGGTCAGAGATACGAATCTCTCCTCTCGATTTATTATTTACTAAAAAATAATTCATTACCTTTTTTATTTTATTGATTAACAATATATGAACCGAGAGATTCAAATCTCGAACTTTCACGTCGAGAATACATAGGTCAACTATGAGCTATGCACGGAGTTATCACATTGATTTTGCACGTGATCTTTATACACATTCATGAATTATTTTACTCAAATTTCATTTTCTTTCTACTTTCACACCAAATTTAGGGCTTTCTTCAAGAACAATATTAAATTCTCAACTTTTGGTTGAGAGAAAATATAAACCCTAACCCTAATTGAAGCATTCATGAGTGTTCTAATTCAAAGTAAGAGAGAGAGAGAGAGATGATTTGATGGGAAAGATGTTATTCTTGTCTAGGACAAGACATGATATAGAACAGTAACACTTAGTGTTTATATGCTTCAAATCTTGGCCCTAACTTTCAAAACCCCTTTGTTATATATATATATATATATATATAATATTTGGCTGTCAATTCAGCTTAAATCACTTGTAACAGTGATTGGTTGATGTTTTATATTAATGGTTGCTTCTTCTGTGAGAGATTGATACTCAGAGATTGAATTGATGGAGAGAGATAGATATCATTTAATTTTGAGATCAATATCTATACTGTTCATAACACCAATTTTTTATTTCAAATTTGTCTATGATATTAGTTTGAAATCTTGTTTTTTTGGCAAATTTTGGATTAAGGTTTGTGAAAAACTTAGGATATCGAGTGATCGAGCTGAAATTAGGGTGAAATTTAGTTTTCGATTTGGAAATAGAACTTGTATGGGTTAAGTTGCTAGAGGTTCTTTCGATTCATGATCTTGGTTTTTATTGAGCTGATTATTTTAGTTCAATAGTGTGACGTTGAGATTTGAGCTTCTAACTTAATCACTCTGCTTATGCGTTTGATTTTACAAATTTTGTTGTTGCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTACTATAGACTCAAATCACGAGTCGAACTCTTACAAAGAAACAACAGGTAAGTTCATACAATGTTTTACTTGTCGAAGTCTCGATCTCTATCTCTCGTTATTAATATCGATATCGTGTCGATGATAATTGCAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTCAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGTTCGAGGAAAGTAAGGATGTTTGAATTTCTTGTTTTTATGTTTTTTTTTGTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTGTAATGAATAATATATATTGGAATTTTTGTTTCAGAACCAACTCATGCATGATTCCATCTCTGCTCTTCAGAGAAAGGCAAATTTCTCCTACTTTTTTCATATTTTTTAAAATAATTTTCGATTTTGTTCTAATTAATTTACTTCGCATTCTCATTTATTTTTATCAGGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGGTGATCGTAACGTTTAGTTTAAAACGCTATTATTTCGTTTTAAATATGATCTAACTCATTTGTTTAAGCTTTAGTTTACGATGCTTAATTATAATTTATGTTCGGTTAAACGAAATTAAGATCAAGGAGAAGGAGAAGAGCGTAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTATTCCCATCAGCTCCTCACCCGTCTCTAAACATCGGGTAATCTTTCACTAGTTTTTCGAGTTCGGAATGACTTTTGAAACTCGATAACGTTACGTGTTCTTTGCCTTTTGAACGTATAGGCTTGCGAGTTTTGATGGTCACCTGTGAATCCCATTGCACGTTGTGAGATTCGAGCGATCGGGAAGAAGACGGTGACAGTGACGGTGACGGGGCGGGTTGAATAATGGAAAATGGAATGGATTAATTATAACCTATATTTGTAATGGATTGGCTAATATGTATGGAGGGTTTGTGGTTGTGGAGGTTTTGTTGTGTTAAGTGAAAGACAATATATGAACTACTTTTTGTTGTGTGTTGTTGTTTTGTGGTGATATTGTTGTGGCCAAATAAAGTTGTTTCGTTCCCAAGAAAGTGCTTTTGGGAAAAGTTTGTGGCTTTTAGGGTTTAGATTACTTTGACAATGCATGCAATAGTTTTAA

mRNA sequence

AAAAAAAAATGGGAAGAGGTAAGGTGGAGCTGAAGAAGATAGAGAACAAAATAAACCGACAGGTAACCTTCACAAAACGAAGAAATGGTCTTCTTAAAAAGGCTTATGAGCTCTCCATTTTGTGTGATGCTGAGGTGGCACTCATCGTCTTCTCCACCGCCAAGACGTTGGAGAGGTATCAAAGACATAGCTATGGAGCTTTGGCAGCCTCCCATCATCTCAAGGACACCGAGACGAATTCTTGGAGAAGAATTGGAAGATTTGGAGACGAACGAATTGGACCAACTCGAGATTCAATTGGAAACGTCTCTAAAGCAAATCAGAACCAAACCGTGTTTGATCAGTTATCTGAGCTAAAAAAGAAGGAAGAATTACTGCTGGAAACTAATCAAGCTTTGAGGAGGAAGTTGGAAGAAAGCAGTGCAGCTCTTCATTCATCATGGGAAGCTTCGGAACCCAACAATTTGCATTACTGTGGACAACCTGAGGCCTTTCTTCAAGGCAATAATATTGCATTGGAAAATAGTTACAATCCAGCAGAGGTTTCAAATCAAGAAAACGCCATAAACTCTGAGCCAGAAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTACTATAGACTCAAATCACGAGTCGAACTCTTACAAAGAAACAACAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTCAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGTTCGAGGAAAGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGATCAAGGAGAAGGAGAAGAGCGTAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTATTCCCATCAGCTCCTCACCCGTCTCTAAACATCGGGCTTGCGAGTTTTGATGGTCACCTGTGAATCCCATTGCACGTTGTGAGATTCGAGCGATCGGGAAGAAGACGGTGACAGTGACGGTGACGGGGCGGGTTGAATAATGGAAAATGGAATGGATTAATTATAACCTATATTTGTAATGGATTGGCTAATATGTATGGAGGGTTTGTGGTTGTGGAGGTTTTGTTGTGTTAAGTGAAAGACAATATATGAACTACTTTTTGTTGTGTGTTGTTGTTTTGTGGTGATATTGTTGTGGCCAAATAAAGTTGTTTCGTTCCCAAGAAAGTGCTTTTGGGAAAAGTTTGTGGCTTTTAGGGTTTAGATTACTTTGACAATGCATGCAATAGTTTTAA

Coding sequence (CDS)

ATGGGAAGAGGTAAGGTGGAGCTGAAGAAGATAGAGAACAAAATAAACCGACAGGTAACCTTCACAAAACGAAGAAATGGTCTTCTTAAAAAGGCTTATGAGCTCTCCATTTTGTGTGATGCTGAGGTGGCACTCATCGTCTTCTCCACCGCCAAGACGTTGGAGAGGTATCAAAGACATAGCTATGGAGCTTTGGCAGCCTCCCATCATCTCAAGGACACCGAGACGAATTCTTGGAGAAGAATTGGAAGATTTGGAGACGAACGAATTGGACCAACTCGAGATTCAATTGGAAACGTCTCTAAAGCAAATCAGAACCAAACCGTGTTTGATCAGTTATCTGAGCTAAAAAAGAAGGAAGAATTACTGCTGGAAACTAATCAAGCTTTGAGGAGGAAGTTGGAAGAAAGCAGTGCAGCTCTTCATTCATCATGGGAAGCTTCGGAACCCAACAATTTGCATTACTGTGGACAACCTGAGGCCTTTCTTCAAGGCAATAATATTGCATTGGAAAATAGTTACAATCCAGCAGAGGTTTCAAATCAAGAAAACGCCATAAACTCTGAGCCAGAAGGTAGGGTTCAACTGAAAAGAATTGAGAACAAAATAAACAGGCAGGTTACTTTCTCCAAAAGGAAAGCTGGTTTGCTGAAGAAGGCTCATGAAATCTCTGTTCTCTGTGATGCTGAAGTTGCTTTGATTGTTTTCTCCCACAAAGGAAAGCTCTTTGAATACTCCTCTGATTCCAGTATGGAGAAAATACTCGAACGATATGAACGATATTCGTATGTGGGCAGGCAACAAATTGCAGCTACTGAATCTGAATTTTCACAGGAAAATTGGACTCTCGAGTACTATAGACTCAAATCACGAGTCGAACTCTTACAAAGAAACAACAGTCATTACATGGGAGAAGATTTGGATTCATTAAGCGTCAAAGAACTGCAAAACTTGGAGCAACAAATCGACACTGCACTCAAACATGTTCGTTCGAGGAAAGAACGAGCAATTCAGGAACAAAACGCTCTCCTAGCAAAGCAGATCAAGGAGAAGGAGAAGAGCGTAGCAATGGCTCAGCAGGCCGAGTGGGAGCAGCAGCAGCAACATGGTTACAATGCACTGTCTTTCTTATTCCCATCAGCTCCTCACCCGTCTCTAAACATCGGGCTTGCGAGTTTTGATGGTCACCTGTGA

Protein sequence

MGRGKVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTAKTLERYQRHSYGALAASHHLKDTETNSWRRIGRFGDERIGPTRDSIGNVSKANQNQTVFDQLSELKKKEELLLETNQALRRKLEESSAALHSSWEASEPNNLHYCGQPEAFLQGNNIALENSYNPAEVSNQENAINSEPEGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQIKEKEKSVAMAQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGHL

Homology

[Close]

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot
Match: AP1C_BRAOA (Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra GN=AP1C PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-64
Identity = 143/224 (63.84%), Postives = 169/224 (75.45%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL ++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK V M
Sbjct: 124 PKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK-VLM 183

Query: 372 AQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 390
           AQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 184 AQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot
Match: 1AP1_BRAOT (Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica GN=1AP1 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-64
Identity = 143/224 (63.84%), Postives = 169/224 (75.45%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL ++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK V M
Sbjct: 124 PKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK-VLM 183

Query: 372 AQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 390
           AQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 184 AQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot
Match: AP1C_BRAOB (Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. botrytis GN=AP1C PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.3e-64
Identity = 143/224 (63.84%), Postives = 169/224 (75.45%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGL KKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLFKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL ++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK V M
Sbjct: 124 PKELQNLEQQLDTALKHIRSRKNQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREK-VLM 183

Query: 372 AQQAEWEQQQQHGYNALS------------FLFPSAPHPSLNIG 390
           AQQ +W+ QQ HG N  S            ++    P P LN+G
Sbjct: 184 AQQEQWD-QQNHGQNMPSPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-63
Identity = 141/222 (63.51%), Postives = 169/222 (76.13%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL ++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+RS              RKE+AIQEQN++L+KQIKE+EK +  
Sbjct: 124 SKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREK-ILR 183

Query: 372 AQQAEWEQQQQHGYN----------ALSFLFPSAPHPSLNIG 390
           AQQ +W+ QQ HG+N             ++    P P LN+G
Sbjct: 184 AQQEQWD-QQNHGHNMPPPPPPQQIQHPYMLSHQPSPFLNMG 221

[Close]

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot
Match: AP1_ARALL (Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata GN=AP1 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.4e-63
Identity = 140/224 (62.50%), Postives = 170/224 (75.89%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL+++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLNAMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+R+              RKE+AIQEQN++L+KQIKE+EK +  
Sbjct: 124 PKELQNLEQQLDTALKHIRTRKNQLMYESINELQRKEKAIQEQNSMLSKQIKEREK-ILR 183

Query: 372 AQQAEWEQQQQHGYN------------ALSFLFPSAPHPSLNIG 390
           AQQ +W+ QQ HG+N               ++    P P LN+G
Sbjct: 184 AQQEQWD-QQNHGHNMPPPPPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]

BLAST of Cp4.1LG07g00830 vs. TrEMBL
Match: A0A0D9ZD99_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 8.0e-74
Identity = 198/466 (42.49%), Postives = 272/466 (58.37%), Query Frame = 1


Query: 1   MGRGKVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTA--------- 60
           MGRGKV L++IENKI+RQVTF KRRNGLLKKAYELSILCDAEVAL++FS A         
Sbjct: 1   MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60

Query: 61  ----KTLERYQRHSYGALAASHHLKDTETNSWRRI---------------GRFGDERIGP 120
               KTLERYQR+ Y +  A+    D   N+++                    G++    
Sbjct: 61  SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120

Query: 121 TRDSIGNVS----------KANQNQTVFDQLSELKKKEELLLETNQALRRKLEE---SSA 180
             + +  +           ++ + Q + D+L +LK+KE++L + N+ L+RKL+E    +A
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 180

Query: 181 ALHSSWEASEPNNLHYCG--------QPEAFLQGNNI-ALENSYNPA------------- 240
                W  +  N     G        QPE F Q   + A++ +  PA             
Sbjct: 181 PPQPPWNGNCSNGHGGGGGVFSSEPPQPEHFFQALGLHAVDVNQPPAPPPGGREREREGG 240

Query: 241 -EVSNQENAINSEPEGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVF 300
                +         G+VQLKRIENKINRQVTFSKR++GLLKKA+EISVLCDAEVALI+F
Sbjct: 241 RRRRRRRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIF 300

Query: 301 SHKGKLFEYSSDSSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQ 360
           S KGKL+EY++DS M+KILERYERYSY  +  I+A ES+ +Q NW  EY +LK++VE +Q
Sbjct: 301 STKGKLYEYATDSCMDKILERYERYSYAEKVLISA-ESD-TQGNWCHEYRKLKAKVETIQ 360

Query: 361 RNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNA 389
           +   H MGEDL+SL++KELQ LEQQ++ +LKH+RS              RKE+++QE+N 
Sbjct: 361 KCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENK 420

[Close]

BLAST of Cp4.1LG07g00830 vs. TrEMBL
Match: A0A0E0D6X6_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 196/459 (42.70%), Postives = 271/459 (59.04%), Query Frame = 1


Query: 1   MGRGKVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTA--------- 60
           MGRGKV L++IENKI+RQVTF KRRNGLLKKAYELSILCDAEVAL++FS A         
Sbjct: 61  MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 120

Query: 61  ----KTLERYQRHSYGALAASHHLKDTETNSWRRI---------------GRFGDERIGP 120
               KTLERYQR+ Y +  A+    D   N+++                    G++    
Sbjct: 121 SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 180

Query: 121 TRDSIGNVS----------KANQNQTVFDQLSELKKKEELLLETNQALRRKLEE---SSA 180
             + +  +           ++ + Q + D+L +LK+KE++L + N+ L+RKL+E    +A
Sbjct: 181 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 240

Query: 181 ALHSSWEASEPNNLHYCG-------QPEAFLQGNNI-ALENSYNPAEVSNQ-------EN 240
                W  +  N     G       QPE F Q   + A++ +  PA    +       + 
Sbjct: 241 PPQPPWNGNCSNGQGGSGVFSSEPPQPEHFFQALGLHAVDVNQPPAPPPGEVPLSFLFKF 300

Query: 241 AINSEPE-GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLF 300
                P   +  LKRIENKINRQVTFSKR++GLLKKA+EISVLCDAEVALI+FS KGKL+
Sbjct: 301 VAKCLPNFFQCNLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLY 360

Query: 301 EYSSDSSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYM 360
           EY++DS M+KILERYERYSY  +  I+A ES+ +Q NW  EY +LK++VE +Q+   H M
Sbjct: 361 EYATDSCMDKILERYERYSYAEKVLISA-ESD-TQGNWCHEYRKLKAKVETIQKCQKHLM 420

Query: 361 GEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIK 389
           GEDL+SL++KELQ LEQQ++ +LKH+RS              RKE+++QE+N +L K++ 
Sbjct: 421 GEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELV 480

[Close]

BLAST of Cp4.1LG07g00830 vs. TrEMBL
Match: A0A0D9ZD98_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.4e-72
Identity = 197/471 (41.83%), Postives = 271/471 (57.54%), Query Frame = 1


Query: 1   MGRGKVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTA--------- 60
           MGRGKV L++IENKI+RQVTF KRRNGLLKKAYELSILCDAEVAL++FS A         
Sbjct: 1   MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSS 60

Query: 61  ----KTLERYQRHSYGALAASHHLKDTETNSWRRI---------------GRFGDERIGP 120
               KTLERYQR+ Y +  A+    D   N+++                    G++    
Sbjct: 61  SNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPL 120

Query: 121 TRDSIGNVS----------KANQNQTVFDQLSELKKKEELLLETNQALRRKLEE---SSA 180
             + +  +           ++ + Q + D+L +LK+KE++L + N+ L+RKL+E    +A
Sbjct: 121 ATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDEIDVEAA 180

Query: 181 ALHSSWEASEPNNLHYCG--------QPEAFLQGNNI-ALENSYNPA------------- 240
                W  +  N     G        QPE F Q   + A++ +  PA             
Sbjct: 181 PPQPPWNGNCSNGHGGGGGVFSSEPPQPEHFFQALGLHAVDVNQPPAPPPGGREREREGG 240

Query: 241 -EVSNQENAINSEPEGRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVF 300
                +         G+VQLKRIENKINRQVTFSKR++GLLKKA+EISVLCDAEVALI+F
Sbjct: 241 RRRRRRRKNRRKMGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIF 300

Query: 301 SHKGKLFEYSSDSSMEKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQ 360
           S KGKL+EY++DS M+KILERYERYSY  +  I+A ES+ +Q NW  EY +LK++VE +Q
Sbjct: 301 STKGKLYEYATDSCMDKILERYERYSYAEKVLISA-ESD-TQGNWCHEYRKLKAKVETIQ 360

Query: 361 RNNSHYMGEDLDSLSVKELQNLEQQIDTALKHVRS--------------RKERAIQEQNA 389
           +   H MGEDL+SL++KELQ LEQQ++ +LKH+RS              RKE+++QE+N 
Sbjct: 361 KCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENK 420

[Close]

BLAST of Cp4.1LG07g00830 vs. TrEMBL
Match: U5L2F4_GOSHI (MADS box protein MADS42 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.3e-71
Identity = 157/214 (73.36%), Postives = 179/214 (83.64%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVALIVFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  R Q+ ATES+  Q NW++EY RLK++V+LLQ+N+ HYMGEDLDSLS
Sbjct: 64  EKILERYERYSYAER-QLVATESQ-PQGNWSMEYNRLKAKVDLLQKNHRHYMGEDLDSLS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
           +KELQNLEQQ+DTA+KH+RS              RKE+AIQEQNA+LAKQIKE+EK+VA 
Sbjct: 124 LKELQNLEQQLDTAIKHIRSKKNQLISESISELQRKEKAIQEQNAMLAKQIKEREKTVAQ 183

Query: 372 AQQAEWEQ-QQQHGYN-ALSFLFPSAPHPSLNIG 390
           AQQ++W Q QQQ G N + SFL P  PHP LNIG
Sbjct: 184 AQQSQWGQHQQQLGLNTSTSFLLPQPPHPCLNIG 215

[Close]

BLAST of Cp4.1LG07g00830 vs. TrEMBL
Match: A0A061EAI9_THECC (K-box region and MADS-box transcription factor family protein OS=Theobroma cacao GN=TCM_011475 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68
Identity = 154/211 (72.99%), Postives = 169/211 (80.09%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ +A      SQ NWT+EY RLK++VELLQ+N+ HYMGEDLD LS
Sbjct: 64  EKILERYERYSYAERQLVATQPG--SQGNWTMEYNRLKAKVELLQKNHRHYMGEDLDFLS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
           +KELQNLEQQ+DTALKH+RS              RKE+AIQEQN +LAKQIKEKEK+V  
Sbjct: 124 LKELQNLEQQLDTALKHIRSKKNQLMYESISELQRKEKAIQEQNTMLAKQIKEKEKTV-- 183

Query: 372 AQQAEWEQQQQHGYNALSFLFPSAPHPSLNI 389
           AQQ++W  QQ HG N   FL P  PHP LNI
Sbjct: 184 AQQSQW-GQQGHGLNTSPFLLPQ-PHPCLNI 208

[Close]

BLAST of Cp4.1LG07g00830 vs. TAIR10
Match: AT1G69120.1 (AT1G69120.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63
Identity = 140/224 (62.50%), Postives = 169/224 (75.45%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVAL+VFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  RQ I A ES+ +  NW++EY RLK+++ELL+RN  HY+GEDL ++S
Sbjct: 64  EKILERYERYSYAERQLI-APESDVN-TNWSMEYNRLKAKIELLERNQRHYLGEDLQAMS 123

Query: 312 VKELQNLEQQIDTALKHVRSR--------------KERAIQEQNALLAKQIKEKEKSVAM 371
            KELQNLEQQ+DTALKH+R+R              KE+AIQEQN++L+KQIKE+EK +  
Sbjct: 124 PKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREK-ILR 183

Query: 372 AQQAEWEQQQQHGYN------------ALSFLFPSAPHPSLNIG 390
           AQQ +W+QQ Q G+N               ++    P P LN+G
Sbjct: 184 AQQEQWDQQNQ-GHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMG 223

[Close]

BLAST of Cp4.1LG07g00830 vs. TAIR10
Match: AT1G26310.1 (AT1G26310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-57
Identity = 119/188 (63.30%), Postives = 149/188 (79.26%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRV+LKRIENKINRQVTFSKR+ GLLKKA EISVLCDAEV+LIVFSHKGKLFEYSS+S M
Sbjct: 4   GRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EK+LERYERYSY  RQ IA      +Q NW++EY RLK+++ELL+RN  HY+GE+L+ +S
Sbjct: 64  EKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 366
           +K+LQNLEQQ++TALKH+RS              RKE+ IQE+N++L KQIKE+E ++  
Sbjct: 124 LKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERE-NILR 183

[Close]

BLAST of Cp4.1LG07g00830 vs. TAIR10
Match: AT5G60910.1 (AT5G60910.1 AGAMOUS-like 8)

HSP 1 Score: 198.7 bits (504), Expect = 6.5e-51
Identity = 117/202 (57.92%), Postives = 147/202 (72.77%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR++GLLKKAHEISVLCDAEVALIVFS KGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           E+ILERY+RY Y  +Q +    S+   ENW LE+ +LK+RVE+L++N  ++MGEDLDSLS
Sbjct: 64  ERILERYDRYLYSDKQLVGRDVSQ--SENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLS 123

Query: 312 VKELQNLEQQIDTALKHVRSR--------------KERAIQEQNALLAKQIKEKEKSVAM 371
           +KELQ+LE Q+D A+K +RSR              K++A+Q+ N  L K+IKE+EK    
Sbjct: 124 LKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREK---- 183

Query: 372 AQQAEWEQQQQHGYNALSFLFP 380
            +  + E Q     N+ S L P
Sbjct: 184 -KTGQQEGQLVQCSNSSSVLLP 198

[Close]

BLAST of Cp4.1LG07g00830 vs. TAIR10
Match: AT3G30260.1 (AT3G30260.1 AGAMOUS-like 79)

HSP 1 Score: 160.2 bits (404), Expect = 2.6e-39
Identity = 103/198 (52.02%), Postives = 133/198 (67.17%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQL+RIENKI RQVTFSKR+ GL+KKA EISVLCDAEVALIVFS KGKLFEYS+ SSM
Sbjct: 4   GRVQLRRIENKIRRQVTFSKRRTGLVKKAQEISVLCDAEVALIVFSPKGKLFEYSAGSSM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           E+IL+RYER +Y G  Q   T +  SQ   + E  +L   +++LQR+  H  GE++D LS
Sbjct: 64  ERILDRYERSAYAG--QDIPTPNLDSQGECSTECSKLLRMIDVLQRSLRHLRGEEVDGLS 123

Query: 312 VKELQNLEQQIDTALKHVRSRKERAIQEQNALLAKQIKE----KEKSVAMAQQAEWEQQQ 371
           +++LQ +E Q+DTALK  RSRK + + E  A L K+ KE    K++    A + E  Q Q
Sbjct: 124 IRDLQGVEMQLDTALKKTRSRKNQLMVESIAQLQKKEKELKELKKQLTKKAGEREDFQTQ 183

Query: 372 QHGYNALSFLFP--SAPH 384
              ++  S   P   +PH
Sbjct: 184 NLSHDLASLATPPFESPH 199

[Close]

BLAST of Cp4.1LG07g00830 vs. TAIR10
Match: AT3G02310.1 (AT3G02310.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-34
Identity = 83/149 (55.70%), Postives = 108/149 (72.48%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRV+LKRIENKINRQVTF+KR+ GLLKKA+E+SVLCDAEV+LIVFS++GKL+E+ S S+M
Sbjct: 4   GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
            K LERY++ SY   +       E   EN   EY +LK R E LQR   + +GEDL  L+
Sbjct: 64  LKTLERYQKCSYGSIEVNNKPAKEL--ENSYREYLKLKGRYENLQRQQRNLLGEDLGPLN 123

Query: 312 VKELQNLEQQIDTALKHVRSRKERAIQEQ 341
            KEL+ LE+Q+D +LK VR  K + + +Q
Sbjct: 124 SKELEQLERQLDGSLKQVRCIKTQYMLDQ 150

[Close]

BLAST of Cp4.1LG07g00830 vs. NCBI nr
Match: gi|449452833|ref|XP_004144163.1| (PREDICTED: truncated transcription factor CAULIFLOWER A-like [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 2.5e-92
Identity = 188/219 (85.84%), Postives = 194/219 (88.58%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM
Sbjct: 4   GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYS+VGRQQ AA+ESEFS ENWTLEYYRLKS+VELLQRNNSHYMGEDLDSLS
Sbjct: 64  EKILERYERYSFVGRQQNAASESEFSYENWTLEYYRLKSKVELLQRNNSHYMGEDLDSLS 123

Query: 312 VKELQNLEQQIDTALKHVRSRKE--------------RAIQEQNALLAKQIKEKEKSVAM 371
           VKELQNLEQQIDTALKHVR+RK               R I+E N  LAKQIKEKEKSVA+
Sbjct: 124 VKELQNLEQQIDTALKHVRTRKNQLMFESITDLQKKVRNIEENNVQLAKQIKEKEKSVAL 183

Query: 372 AQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 397
           AQQAEWE QQQ GYNALSFLFP  PHPSLNIGLASFDGH
Sbjct: 184 AQQAEWEHQQQQGYNALSFLFPPPPHPSLNIGLASFDGH 222

[Close]

BLAST of Cp4.1LG07g00830 vs. NCBI nr
Match: gi|659089302|ref|XP_008445435.1| (PREDICTED: truncated transcription factor CAULIFLOWER A-like [Cucumis melo])

HSP 1 Score: 346.3 bits (887), Expect = 7.2e-92
Identity = 186/219 (84.93%), Postives = 194/219 (88.58%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM
Sbjct: 4   GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYS+VGRQQ AA+ES FS ENWTLEYYRLKS+VELLQRNNSHY+GEDLDSLS
Sbjct: 64  EKILERYERYSFVGRQQNAASESHFSHENWTLEYYRLKSKVELLQRNNSHYVGEDLDSLS 123

Query: 312 VKELQNLEQQIDTALKHVRSRKE--------------RAIQEQNALLAKQIKEKEKSVAM 371
           VKELQNLEQQIDTALKHVRSRK               R I+E NA LAK+IKEKEKSVA+
Sbjct: 124 VKELQNLEQQIDTALKHVRSRKNQLMFESITDLQKKVRTIEENNAQLAKEIKEKEKSVAL 183

Query: 372 AQQAEWEQQQQHGYNALSFLFPSAPHPSLNIGLASFDGH 397
           AQQAEWE QQ HGY+ALSFLFP  PHPSLNIGLASFDGH
Sbjct: 184 AQQAEWEHQQHHGYSALSFLFPPPPHPSLNIGLASFDGH 222

[Close]

BLAST of Cp4.1LG07g00830 vs. NCBI nr
Match: gi|747050399|ref|XP_011071269.1| (PREDICTED: floral homeotic protein APETALA 1 [Sesamum indicum])

HSP 1 Score: 343.2 bits (879), Expect = 6.1e-91
Identity = 231/459 (50.33%), Postives = 281/459 (61.22%), Query Frame = 1


Query: 1   MGRGKVELKKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFST---------- 60
           MGRGKVELK+IENK+NRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS           
Sbjct: 1   MGRGKVELKRIENKVNRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNKGKLYEFCSS 60

Query: 61  ---AKTLERYQR-------------------HSYGALAASHHLKDTETNSW--RRIGRFG 120
                TLERY R                     Y  L A   +            +G+ G
Sbjct: 61  SSMGATLERYHRSSYGPLEAHQSPHNEQNKYQEYMKLKARVEVLQQSQRHLLGEELGQLG 120

Query: 121 DERIGPTRDSIGNVSK---ANQNQTVFDQLSELKKKEELLLETNQALRRKLEESSAALHS 180
            + +    + +    K   +N+N  + +QLS+L +KE  LLE N+ALR KLE +SAAL S
Sbjct: 121 IKELDQLENVLDTSLKEIRSNKNHRMLNQLSDLHQKERNLLEINRALRSKLEGTSAALQS 180

Query: 181 SWEASEPNNLHYCGQPEAF-------LQGNNIALENSYNPAEVSNQENAINSEPE----G 240
           +W+     N+ Y   P          LQ NNI   NS  P  V+      N E      G
Sbjct: 181 TWQLQPELNVQYQQPPPVLPDVLFEPLQSNNIRY-NSVEPNNVAGATQTPNMENNIMGRG 240

Query: 241 RVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSME 300
           +VQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVALIVFSHKGKLFEYS+DS M+
Sbjct: 241 KVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTDSCMD 300

Query: 301 KILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLSV 360
           +ILE+YERYS+  RQ +A  + + S  NWTLEY +LK+R+ELLQRN+ HYMGEDL S+S+
Sbjct: 301 RILEKYERYSFAERQLVANDQPD-SPANWTLEYSKLKARIELLQRNHRHYMGEDLKSISM 360

Query: 361 KELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAMA 395
           K+LQNLEQQ+DTALK++RS              RKE+AIQEQN++LAK+IKEKEK   M 
Sbjct: 361 KDLQNLEQQLDTALKNIRSRKNQLLYDSISELQRKEKAIQEQNSMLAKKIKEKEKE--MG 420

[Close]

BLAST of Cp4.1LG07g00830 vs. NCBI nr
Match: gi|544388717|gb|AGW23344.1| (MADS box protein MADS42 [Gossypium hirsutum])

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 157/214 (73.36%), Postives = 179/214 (83.64%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+AGLLKKAHEISVLCDAEVALIVFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           EKILERYERYSY  R Q+ ATES+  Q NW++EY RLK++V+LLQ+N+ HYMGEDLDSLS
Sbjct: 64  EKILERYERYSYAER-QLVATESQ-PQGNWSMEYNRLKAKVDLLQKNHRHYMGEDLDSLS 123

Query: 312 VKELQNLEQQIDTALKHVRS--------------RKERAIQEQNALLAKQIKEKEKSVAM 371
           +KELQNLEQQ+DTA+KH+RS              RKE+AIQEQNA+LAKQIKE+EK+VA 
Sbjct: 124 LKELQNLEQQLDTAIKHIRSKKNQLISESISELQRKEKAIQEQNAMLAKQIKEREKTVAQ 183

Query: 372 AQQAEWEQ-QQQHGYN-ALSFLFPSAPHPSLNIG 390
           AQQ++W Q QQQ G N + SFL P  PHP LNIG
Sbjct: 184 AQQSQWGQHQQQLGLNTSTSFLLPQPPHPCLNIG 215

[Close]

BLAST of Cp4.1LG07g00830 vs. NCBI nr
Match: gi|1000981644|ref|XP_002512051.2| (PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis])

HSP 1 Score: 270.0 bits (689), Expect = 6.5e-69
Identity = 153/212 (72.17%), Postives = 171/212 (80.66%), Query Frame = 1


Query: 192 GRVQLKRIENKINRQVTFSKRKAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSSDSSM 251
           GRVQLKRIENKINRQVTFSKR+ GLLKKAHEISVLCDAEVALIVFSHKGKLFEYS+DS M
Sbjct: 4   GRVQLKRIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTDSCM 63

Query: 252 EKILERYERYSYVGRQQIAATESEFSQENWTLEYYRLKSRVELLQRNNSHYMGEDLDSLS 311
           E+ILERYERYSY  RQ +A   +  SQENWTLEY RLK++VELLQRN+ HY+GEDLDSL+
Sbjct: 64  ERILERYERYSYAERQLVATDLN--SQENWTLEYNRLKAKVELLQRNHRHYLGEDLDSLT 123

Query: 312 VKELQNLEQQIDTALKHVRSRK--------------ERAIQEQNALLAKQIKEKEKSVAM 371
           +KELQNLEQQ+DTALKH+R+RK              E+AIQEQN +L+KQIKEKEK+V  
Sbjct: 124 LKELQNLEQQLDTALKHIRTRKNQLMFESISELQKKEKAIQEQNNMLSKQIKEKEKAV-- 183

Query: 372 AQQAEWEQQQQHGYNALSFLFPSAPHPSLNIG 390
           AQQA WE QQ HG N   FL P  P P LNIG
Sbjct: 184 AQQALWE-QQNHGNNVSPFLMPQPPLPCLNIG 210

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g00830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AP1C_BRAOA	8.3e-64	63.84	Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. alboglabra GN=AP1C...	[more]
1AP1_BRAOT	8.3e-64	63.84	Floral homeotic protein APETALA 1-1 OS=Brassica oleracea var. italica GN=1AP1 PE...	[more]
AP1C_BRAOB	8.3e-64	63.84	Floral homeotic protein APETALA 1 C OS=Brassica oleracea var. botrytis GN=AP1C P...	[more]
AP1_SINAL	1.8e-63	63.51	Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1	[more]
AP1_ARALL	5.4e-63	62.50	Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp. lyrata GN=AP1 PE=...	[more]

BLAST of Cp4.1LG07g00830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D9ZD99_9ORYZ	8.0e-74	42.49	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]
A0A0E0D6X6_9ORYZ	1.5e-72	42.70	Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1	[more]
A0A0D9ZD98_9ORYZ	3.4e-72	41.83	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]
U5L2F4_GOSHI	1.3e-71	73.36	MADS box protein MADS42 OS=Gossypium hirsutum PE=2 SV=1	[more]
A0A061EAI9_THECC	1.7e-68	72.99	K-box region and MADS-box transcription factor family protein OS=Theobroma cacao...	[more]

BLAST of Cp4.1LG07g00830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69120.1	1.1e-63	62.50	K-box region and MADS-box transcription factor family protein	[more]
AT1G26310.1	2.1e-57	63.30	K-box region and MADS-box transcription factor family protein	[more]
AT5G60910.1	6.5e-51	57.92	AGAMOUS-like 8	[more]
AT3G30260.1	2.6e-39	52.02	AGAMOUS-like 79	[more]
AT3G02310.1	9.5e-34	55.70	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Cp4.1LG07g00830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452833\|ref\|XP_004144163.1\|	2.5e-92	85.84	PREDICTED: truncated transcription factor CAULIFLOWER A-like [Cucumis sativus]	[more]
gi\|659089302\|ref\|XP_008445435.1\|	7.2e-92	84.93	PREDICTED: truncated transcription factor CAULIFLOWER A-like [Cucumis melo]	[more]
gi\|747050399\|ref\|XP_011071269.1\|	6.1e-91	50.33	PREDICTED: floral homeotic protein APETALA 1 [Sesamum indicum]	[more]
gi\|544388717\|gb\|AGW23344.1\|	1.8e-71	73.36	MADS box protein MADS42 [Gossypium hirsutum]	[more]
gi\|1000981644\|ref\|XP_002512051.2\|	6.5e-69	72.17	PREDICTED: truncated transcription factor CAULIFLOWER A [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048437	floral organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048438	floral whorl development
biological_process	GO:0048827	phyllome development
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g00830.1	Cp4.1LG07g00830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 191..211 score: 1.9E-29coord: 226..247 score: 1.9E-29coord: 211..226 score: 1.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 198..245 score: 2.4E-25coord: 10..56 score: 2.4
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 189..248 score: 6.4E-36coord: 1..60 score: 4.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 189..249 score: 29.394coord: 1..61 score: 29
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 192..271 score: 2.75E-32coord: 2..64 score: 5.89
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 273..353 score: 1.1
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 278..369 score: 14
None	No IPR available	unknown	Coil	Coil	coord: 113..136 score: -coord: 315..335 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 190..390 score: 5.4E
None	No IPR available	PANTHER	PTHR11945:SF155	AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED	coord: 190..390 score: 5.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g00830	Cucsa.327980	Cucumber (Gy14) v1	cgycpeB0866
Cp4.1LG07g00830	CmaCh12G001070	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g00830	CmoCh12G000870	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g00830	Cla022037	Watermelon (97103) v1	cpewmB783
Cp4.1LG07g00830	Csa6G367080	Cucumber (Chinese Long) v2	cpecuB837
Cp4.1LG07g00830	MELO3C011409	Melon (DHL92) v3.5.1	cpemeB755
Cp4.1LG07g00830	ClCG08G010540	Watermelon (Charleston Gray)	cpewcgB749
Cp4.1LG07g00830	CSPI06G19780	Wild cucumber (PI 183967)	cpecpiB839
Cp4.1LG07g00830	Lsi08G009070	Bottle gourd (USVL1VR-Ls)	cpelsiB686
Cp4.1LG07g00830	MELO3C011410.2	Melon (DHL92) v3.6.1	cpemedB891
Cp4.1LG07g00830	CsaV3_6G033790	Cucumber (Chinese Long) v3	cpecucB1031
Cp4.1LG07g00830	Bhi04G000928	Wax gourd	cpewgoB1033
Cp4.1LG07g00830	CsGy6G019340	Cucumber (Gy14) v2	cgybcpeB875
Cp4.1LG07g00830	Carg20578	Silver-seed gourd	carcpeB0925
Cp4.1LG07g00830	Carg09257	Silver-seed gourd	carcpeB0207

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g00830	Cp4.1LG11g04040	Cucurbita pepo (Zucchini)	cpecpeB138

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g00830	Wax gourd	cpewgoB1049
Cp4.1LG07g00830	Cucurbita maxima (Rimu)	cmacpeB791
Cp4.1LG07g00830	Cucurbita moschata (Rifu)	cmocpeB744