Carg09139 (gene) Silver-seed gourd

Overview
NameCarg09139
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionVQ motif-containing protein 20-like
LocationCucurbita_argyrosperma_scaffold_063 : 743218 .. 743943 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCCTCAGCAACCTCTTAATGGGAAGAGGGATCAGAGCACCGCCAATACCAACAACAATGCCAAGGTTTTGTGTCCGCCTCCATTGAAGATCAATAAGGATTCTCATTTCATTAGGAAATCTTCGTCGTCTAATTCTACTTCGCCTTCTTCGTCTTCGTCTTCCACTTCTTCGCAGCTTGTCAATGGCATCGCCGCCGCTGTTGCTGTCGCAGGTTCTGTCAAGCCGCCGCCGCAGCGTCATCCGGTGATTATATACACGCATTCTCCCAAAATTATCCACACGCATCCTCGAGATTTTATGGCGCTGGTGCAAAAGCTCACTGGAATGTCTCGATCCGATGAAGAAGCTTCTCCTAAGGCGACGAAATCTGGCGACGAGAATAATAAGGGATCTAAAGCCGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAGATGAGAATTGCTGCAGCGGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTTGCTCCGCCGATCTTCGAGCCACCGCCACCTCCTCCACAACTTGCTAATTCTTACCTAACGAACATTCCGGTTTACAGGCCGAATTCGACGGAGTTTTTGTGCTCTAATCAGCCGTTTTTTAACTACGACGATTCCTTGCTCTTTGGCGCTCCTAACATCCAATCTCTTGCGTCCACTAATTCTACACTGAACGGAATTAACGATTTCTGCGAATATGGCGAATATTAG

mRNA sequence

ATGAGCCCTCAGCAACCTCTTAATGGGAAGAGGGATCAGAGCACCGCCAATACCAACAACAATGCCAAGGTTTTGTGTCCGCCTCCATTGAAGATCAATAAGGATTCTCATTTCATTAGGAAATCTTCGTCGTCTAATTCTACTTCGCCTTCTTCGTCTTCGTCTTCCACTTCTTCGCAGCTTGTCAATGGCATCGCCGCCGCTGTTGCTGTCGCAGGTTCTGTCAAGCCGCCGCCGCAGCGTCATCCGGTGATTATATACACGCATTCTCCCAAAATTATCCACACGCATCCTCGAGATTTTATGGCGCTGGTGCAAAAGCTCACTGGAATGTCTCGATCCGATGAAGAAGCTTCTCCTAAGGCGACGAAATCTGGCGACGAGAATAATAAGGGATCTAAAGCCGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAGATGAGAATTGCTGCAGCGGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTTGCTCCGCCGATCTTCGAGCCACCGCCACCTCCTCCACAACTTGCTAATTCTTACCTAACGAACATTCCGGTTTACAGGCCGAATTCGACGGAGTTTTTGTGCTCTAATCAGCCGTTTTTTAACTACGACGATTCCTTGCTCTTTGGCGCTCCTAACATCCAATCTCTTGCGTCCACTAATTCTACACTGAACGGAATTAACGATTTCTGCGAATATGGCGAATATTAG

Coding sequence (CDS)

ATGAGCCCTCAGCAACCTCTTAATGGGAAGAGGGATCAGAGCACCGCCAATACCAACAACAATGCCAAGGTTTTGTGTCCGCCTCCATTGAAGATCAATAAGGATTCTCATTTCATTAGGAAATCTTCGTCGTCTAATTCTACTTCGCCTTCTTCGTCTTCGTCTTCCACTTCTTCGCAGCTTGTCAATGGCATCGCCGCCGCTGTTGCTGTCGCAGGTTCTGTCAAGCCGCCGCCGCAGCGTCATCCGGTGATTATATACACGCATTCTCCCAAAATTATCCACACGCATCCTCGAGATTTTATGGCGCTGGTGCAAAAGCTCACTGGAATGTCTCGATCCGATGAAGAAGCTTCTCCTAAGGCGACGAAATCTGGCGACGAGAATAATAAGGGATCTAAAGCCGTTGTGAGTGATGATAATGAATCGTCGTCCGTTGTGACAGATGAGAATTGCTGCAGCGGCGGCGTGGTGGAAGGTCAGGTTAATTCGTGTTTTGCTCCGCCGATCTTCGAGCCACCGCCACCTCCTCCACAACTTGCTAATTCTTACCTAACGAACATTCCGGTTTACAGGCCGAATTCGACGGAGTTTTTGTGCTCTAATCAGCCGTTTTTTAACTACGACGATTCCTTGCTCTTTGGCGCTCCTAACATCCAATCTCTTGCGTCCACTAATTCTACACTGAACGGAATTAACGATTTCTGCGAATATGGCGAATATTAG

Protein sequence

MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHFIRKSSSSNSTSPSSSSSSTSSQLVNGIAAAVAVAGSVKPPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASPKATKSGDENNKGSKAVVSDDNESSSVVTDENCCSGGVVEGQVNSCFAPPIFEPPPPPPQLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGEY
Homology
[Close]
BLAST of Carg09139 vs. NCBI nr
Match: XP_022933476.1 (VQ motif-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 2.2e-63
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDS XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120
           XXXXXXXXXXXXXXXXXXXXX PVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120

Query: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180
           KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE 240
           ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE
Sbjct: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE 240

Query: 241 Y 242
           Y
Sbjct: 241 Y 241

[Close]
BLAST of Carg09139 vs. NCBI nr
Match: XP_023531062.1 (VQ motif-containing protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62
Identity = 238/241 (98.76%), Postives = 238/241 (98.76%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDS XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120
           XXXXXXXXXXXXXXXXXXXXX PVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120

Query: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180
           KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE 240
           ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNG NDFCEYGE
Sbjct: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGNNDFCEYGE 240

Query: 241 Y 242
           Y
Sbjct: 241 Y 241

[Close]
BLAST of Carg09139 vs. NCBI nr
Match: XP_023007145.1 (VQ motif-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 235/241 (97.51%), Postives = 235/241 (97.51%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKD  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120
           XXXXXXXXXXXXXXXXXXXXX   IIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120

Query: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180
           KAT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL
Sbjct: 121 KATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180

Query: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE 240
           ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE
Sbjct: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEYGE 240

Query: 241 Y 242
           Y
Sbjct: 241 Y 241

[Close]
BLAST of Carg09139 vs. NCBI nr
Match: XP_022135386.1 (VQ motif-containing protein 20 [Momordica charantia])

HSP 1 Score: 170.6 bits (431), Expect = 6.4e-39
Identity = 190/254 (74.80%), Postives = 198/254 (77.95%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTN---NNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXX 60
           MSPQQ L+GKRD  +   N         CPPPLKINKDSH         XXXXXXXXXXX
Sbjct: 1   MSPQQ-LHGKRDNGSTTANXXXXXXXXXCPPPLKINKDSH-------FIXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 120
           XXXXXXXXXX              HPVIIYTHSPKIIHTHPRDFMALVQKLTG+SRSD+E
Sbjct: 61  XXXXXXXXXXNGVVGAGCAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSRSDDE 120

Query: 121 A---SPKATK-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           A   SP ATK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 AGANSPNATKCGEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXLANSYLTNIPVYRPNSTEFLCSN-QPFFNYDD-SLLFGAPNIQSLASTNS 240
           XXXXXXXXXX    YLTNIPVYRPNST+FLCSN QPFFNY+D SLLFGAPNI SL+S NS
Sbjct: 181 XXXXXXXXXXXXXXYLTNIPVYRPNSTDFLCSNHQPFFNYNDSSLLFGAPNIHSLSSANS 240

Query: 241 TLNGINDFCEYGEY 242
           TLNGINDFC+Y EY
Sbjct: 241 TLNGINDFCDYSEY 246

[Close]
BLAST of Carg09139 vs. NCBI nr
Match: XP_008445554.1 (PREDICTED: VQ motif-containing protein 20-like [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.8e-33
Identity = 185/252 (73.41%), Postives = 192/252 (76.19%), Query Frame = 0 

Query: 1   MSP---QQPLNGKRDQSTANTNNNA-KVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXX 60
           MSP   QQ ++GKRD      NNNA K L PP LKINKDSH         XXXXXXXXXX
Sbjct: 1   MSPQHQQQQIHGKRDN---QINNNANKPLSPPSLKINKDSH------LIRXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDE 120
           XXXXXXXXXXXX             HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+
Sbjct: 61  XXXXXXXXXXXXNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD 120

Query: 121 EASPKAT----------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EAS KAT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EASTKATAKSVDENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTN 239
           XXXXXXXXXXXXXLANSYLTN+PVY PNSTEFLC NQP FNYDDSLLFG  NI SL+S  
Sbjct: 181 XXXXXXXXXXXXXLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSS-- 238

[Close]
BLAST of Carg09139 vs. TAIR10
Match: AT3G18360.1 (VQ motif-containing protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 82  HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 118
           HPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SDE+
Sbjct: 72  HPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDED 107

[Close]
BLAST of Carg09139 vs. TAIR10
Match: AT1G68450.1 (VQ motif-containing protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-07
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 83  PVIIYTHSPKIIHTHPRDFMALVQKLTGM 112
           PVIIY HSPK+IHT   DFMALVQ+LTG+
Sbjct: 44  PVIIYAHSPKVIHTRAEDFMALVQRLTGL 72

[Close]
BLAST of Carg09139 vs. TAIR10
Match: AT1G21326.1 (VQ motif-containing protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 0 

Query: 83  PVIIYTHSPKIIHTHPRDFMALVQKLTG 111
           PVIIYT SP+IIHTHP +FM LVQ+LTG
Sbjct: 60  PVIIYTVSPRIIHTHPNNFMTLVQRLTG 87

[Close]
BLAST of Carg09139 vs. TAIR10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-05
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 83  PVIIYTHSPKIIHTHPRDFMALVQKLTGMS 113
           PV IYT +P+IIHTHP +FM LVQ+LTG +
Sbjct: 60  PVNIYTVTPRIIHTHPNNFMTLVQRLTGQT 89

[Close]
BLAST of Carg09139 vs. Swiss-Prot
Match: sp|Q9LS54|VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 82  HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEE 118
           HPVIIYTH+P+IIHT+P+DFMALVQKLTGM+ SDE+
Sbjct: 72  HPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDED 107

[Close]
BLAST of Carg09139 vs. Swiss-Prot
Match: sp|Q9CA36|VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 83  PVIIYTHSPKIIHTHPRDFMALVQKLTGM 112
           PVIIY HSPK+IHT   DFMALVQ+LTG+
Sbjct: 44  PVIIYAHSPKVIHTRAEDFMALVQRLTGL 72

[Close]
BLAST of Carg09139 vs. Swiss-Prot
Match: sp|F4HWF9|NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.5e-04
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 83  PVIIYTHSPKIIHTHPRDFMALVQKLTGMS 113
           PV IYT +P+IIHTHP +FM LVQ+LTG +
Sbjct: 60  PVNIYTVTPRIIHTHPNNFMTLVQRLTGQT 89

[Close]
BLAST of Carg09139 vs. TrEMBL
Match: tr|A0A1S3BCI6|A0A1S3BCI6_CUCME (VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 185/252 (73.41%), Postives = 192/252 (76.19%), Query Frame = 0 

Query: 1   MSP---QQPLNGKRDQSTANTNNNA-KVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXX 60
           MSP   QQ ++GKRD      NNNA K L PP LKINKDSH         XXXXXXXXXX
Sbjct: 1   MSPQHQQQQIHGKRDN---QINNNANKPLSPPSLKINKDSH------LIRXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDE 120
           XXXXXXXXXXXX             HPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSD+
Sbjct: 61  XXXXXXXXXXXXNGVPTAVAKPPQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDD 120

Query: 121 EASPKAT----------KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           EAS KAT           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 EASTKATAKSVDENNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTN 239
           XXXXXXXXXXXXXLANSYLTN+PVY PNSTEFLC NQP FNYDDSLLFG  NI SL+S  
Sbjct: 181 XXXXXXXXXXXXXLANSYLTNMPVYGPNSTEFLCGNQPIFNYDDSLLFGGSNIPSLSS-- 238

[Close]
BLAST of Carg09139 vs. TrEMBL
Match: tr|A0A1S3BXM8|A0A1S3BXM8_CUCME (VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32
Identity = 193/258 (74.81%), Postives = 203/258 (78.68%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSPQQ ++GKRD +  N N N  +LCPPPLKINKDSH  XXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSPQQQIHGKRD-NQINNNGNKPILCPPPLKINKDSH-LXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDE-EAS 120
           XXXXXXXXXXXXXXXXX    HPVIIYTHSPK+IHTHPRDFMALVQKLTGMSRSD+ EAS
Sbjct: 61  XXXXXXXXXXXXXXXXXPLQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGMSRSDDHEAS 120

Query: 121 PK-----------------ATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            K                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 TKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSL 240
           XXXXXXXXXXXXXXXXXLANSYLTNIP+Y PNS EFLC+NQP FNYDDSLLFG   +   
Sbjct: 181 XXXXXXXXXXXXXXXXXLANSYLTNIPIYTPNSMEFLCANQPIFNYDDSLLFGGNRV--- 240

[Close]
BLAST of Carg09139 vs. TrEMBL
Match: tr|A0A2C9WJ12|A0A2C9WJ12_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G010900 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.7e-28
Identity = 143/221 (64.71%), Postives = 161/221 (72.85%), Query Frame = 0 

Query: 19  NNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 78
           NNN   LCPPPLKINK SH        XXXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 17  NNNG--LCPPPLKINKVSH-------MXXXXXXXXXXXXXXXXXXXXXXXXGVVGPAKPP 76

Query: 79  XXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASPKATKXXXXXXXXXXXXXX 138
              HPVIIYTHSPKIIHTHP+DFMALVQKLTG+SRSDE+ S    KXXXXXXXXXXXXXX
Sbjct: 77  HQRHPVIIYTHSPKIIHTHPKDFMALVQKLTGLSRSDEDQSAH-VKXXXXXXXXXXXXXX 136

Query: 139 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANSYLTNIPVYRPNSTEF 198
           XXXXXXXXXXXXXXXXXXXXX                     +N Y+TNIP++ PNS +F
Sbjct: 137 XXXXXXXXXXXXXXXXXXXXXNCGSIGDGQVNSCFVPPIFEPSNPYMTNIPIFTPNSADF 196

Query: 199 LCSNQPFFNYDDSLLFGAPNIQ-SLASTNSTLNGINDFCEY 239
           LC+NQPF+NY DSL F  PN++ S++S++ST+ GIN+F EY
Sbjct: 197 LCANQPFYNYTDSLFFTTPNMRTSISSSSSTMEGINEFHEY 227

[Close]
BLAST of Carg09139 vs. TrEMBL
Match: tr|A0A2P4HIA4|A0A2P4HIA4_QUESU (Vq motif-containing protein 20 OS=Quercus suber OX=58331 GN=CFP56_64476 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-26
Identity = 147/238 (61.76%), Postives = 165/238 (69.33%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSP Q  + K+D       NNA  LCPPPLK+NKDSH        XXXXXXXXXXXXXXX
Sbjct: 1   MSPTQ-FHAKKD-----VTNNA--LCPPPLKVNKDSH-------FXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDEEASP 120
           XXXXXXXXXXXXX        HPVIIYTHSPK+IHTHPRDFMALVQKLTG SR++++ + 
Sbjct: 61  XXXXXXXXXXXXXGSAKPQQRHPVIIYTHSPKVIHTHPRDFMALVQKLTGQSRTEDQDTA 120

Query: 121 KATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 180
           +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      
Sbjct: 121 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENCSSLGDGQVNSCFVPPIFET 180

Query: 181 ANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFCEY 239
            N Y+TNIP + PNS EFLCSNQP +NY DSL F  PN++S  S++S L GI +F EY
Sbjct: 181 PNPYMTNIPFFTPNSAEFLCSNQPLYNYTDSLFF-TPNMRSSVSSSSNLEGIREFREY 222

[Close]
BLAST of Carg09139 vs. TrEMBL
Match: tr|A0A2N9IJQ8|A0A2N9IJQ8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53798 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.2e-25
Identity = 108/242 (44.63%), Postives = 126/242 (52.07%), Query Frame = 0 

Query: 1   MSPQQPLNGKRDQSTANTNNNAKVLCPPPLKINKDSHXXXXXXXXXXXXXXXXXXXXXXX 60
           MSP Q  + KRD  T N      V CPPPLK+NKDSH                  XXXXX
Sbjct: 1   MSPAQ-FHAKRDVITNN------VFCPPPLKVNKDSH-----------------VXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXHPVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDE---- 120
           XXXXXXXXXX           HPVIIYTHSPKIIHTHPRDFMALVQKLTG SRS++    
Sbjct: 61  XXXXXXXXXXLVHGVKPAQHRHPVIIYTHSPKIIHTHPRDFMALVQKLTGQSRSEDDDIS 120

Query: 121 EASPKATKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +   ++                     XXXXXXX                          
Sbjct: 121 QQKSESCGNGPTSSDDQDNKSVKILGNXXXXXXXVVTDENCSSLGDGGGHQVNSCFVPPM 180

Query: 181 XXXLANSYLTNIPVYRPNSTEFLCSNQPFFNYDDSLLFGAPNIQSLASTNSTLNGINDFC 239
              + + Y+TNIPV+RPNS EFLCSNQ F+NY D+L F  PN+++  S +S L GI +F 
Sbjct: 181 FEAVPDPYITNIPVFRPNSAEFLCSNQAFYNYTDTLFF-TPNMRTAVSASSNLEGIKEFR 217

The following BLAST results are available for this feature:
BLAST of Carg09139 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933476.12.2e-6399.17VQ motif-containing protein 20-like [Cucurbita moschata][more]
XP_023531062.11.4e-6298.76VQ motif-containing protein 20 [Cucurbita pepo subsp. pepo][more]
XP_023007145.11.3e-6097.51VQ motif-containing protein 20-like [Cucurbita maxima][more]
XP_022135386.16.4e-3974.80VQ motif-containing protein 20 [Momordica charantia][more]
XP_008445554.11.8e-3373.41PREDICTED: VQ motif-containing protein 20-like [Cucumis melo][more]
BLAST of Carg09139 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18360.11.1e-1180.56VQ motif-containing protein[more]
AT1G68450.17.8e-0775.86VQ motif-containing protein[more]
AT1G21326.11.7e-0678.57VQ motif-containing protein[more]
AT1G21320.11.9e-0566.67nucleotide binding;nucleic acid binding[more]
BLAST of Carg09139 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LS54|VQ20_ARATH1.9e-1080.56VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1[more]
sp|Q9CA36|VQ8_ARATH1.4e-0575.86VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|F4HWF9|NSRB_ARATH3.5e-0466.67Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE... [more]
BLAST of Carg09139 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BCI6|A0A1S3BCI6_CUCME1.2e-3373.41VQ motif-containing protein 20-like OS=Cucumis melo OX=3656 GN=LOC103488533 PE=4... [more]
tr|A0A1S3BXM8|A0A1S3BXM8_CUCME1.3e-3274.81VQ motif-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103494334 PE=4 SV=1[more]
tr|A0A2C9WJ12|A0A2C9WJ12_MANES9.7e-2864.71Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G010900 PE=4 SV=... [more]
tr|A0A2P4HIA4|A0A2P4HIA4_QUESU3.1e-2661.76Vq motif-containing protein 20 OS=Quercus suber OX=58331 GN=CFP56_64476 PE=4 SV=... [more]
tr|A0A2N9IJQ8|A0A2N9IJQ8_FAGSY1.2e-2544.63Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53798 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09139-RACarg09139-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 88..112
e-value: 2.3E-11
score: 42.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..148
NoneNo IPR availablePANTHERPTHR33143FAMILY NOT NAMEDcoord: 14..229
NoneNo IPR availablePANTHERPTHR33143:SF4VQ MOTIF-CONTAINING PROTEIN 20coord: 14..229

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09139Cla020404Watermelon (97103) v1carwmB0591
Carg09139Cla018970Watermelon (97103) v1carwmB0594
Carg09139Csa1G023620Cucumber (Chinese Long) v2carcuB0622
Carg09139Csa5G609750Cucumber (Chinese Long) v2carcuB0626
Carg09139MELO3C017312Melon (DHL92) v3.5.1carmeB0599
Carg09139ClCG06G014760Watermelon (Charleston Gray)carwcgB0581
Carg09139ClCG05G022640Watermelon (Charleston Gray)carwcgB0580
Carg09139CSPI01G03840Wild cucumber (PI 183967)carcpiB0628
Carg09139Cucsa.199120Cucumber (Gy14) v1carcgyB0673
Carg09139Cucsa.283500Cucumber (Gy14) v1carcgyB0676
Carg09139CmaCh11G002750Cucurbita maxima (Rimu)carcmaB0830
Carg09139CmaCh18G010120Cucurbita maxima (Rimu)carcmaB0833
Carg09139CmoCh18G010230Cucurbita moschata (Rifu)carcmoB0811
Carg09139CmoCh11G002800Cucurbita moschata (Rifu)carcmoB0808
Carg09139Lsi04G002450Bottle gourd (USVL1VR-Ls)carlsiB539
Carg09139Lsi06G013280Bottle gourd (USVL1VR-Ls)carlsiB540
Carg09139Cp4.1LG04g14070Cucurbita pepo (Zucchini)carcpeB0847
Carg09139CsGy5G024810Cucumber (Gy14) v2carcgybB0598
Carg09139CsGy1G003780Cucumber (Gy14) v2carcgybB0594
Carg09139MELO3C017312.2Melon (DHL92) v3.6.1carmedB0606
Carg09139CsaV3_5G034400Cucumber (Chinese Long) v3carcucB0633
Carg09139CsaV3_1G003880Cucumber (Chinese Long) v3carcucB0629
Carg09139Cla97C05G104460Watermelon (97103) v2carwmbB0622
Carg09139Cla97C06G124290Watermelon (97103) v2carwmbB0623
Carg09139Bhi01G002698Wax gourdcarwgoB0703
Carg09139Bhi07G001095Wax gourdcarwgoB0706
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09139Silver-seed gourdcarcarB538
Carg09139Silver-seed gourdcarcarB416
Carg09139Silver-seed gourdcarcarB459
Carg09139Silver-seed gourdcarcarB496
Carg09139Cucumber (Gy14) v2carcgybB0595
Carg09139Cucumber (Gy14) v1carcgyB0670
Carg09139Cucurbita maxima (Rimu)carcmaB0827
Carg09139Cucurbita maxima (Rimu)carcmaB0832
Carg09139Cucurbita maxima (Rimu)carcmaB0834
Carg09139Cucurbita maxima (Rimu)carcmaB0836
Carg09139Cucurbita moschata (Rifu)carcmoB0805
Carg09139Cucurbita moschata (Rifu)carcmoB0810
Carg09139Cucurbita moschata (Rifu)carcmoB0812
Carg09139Cucurbita moschata (Rifu)carcmoB0814
Carg09139Cucurbita pepo (Zucchini)carcpeB0840
Carg09139Cucurbita pepo (Zucchini)carcpeB0845
Carg09139Cucurbita pepo (Zucchini)carcpeB0846
Carg09139Wild cucumber (PI 183967)carcpiB0629
Carg09139Wild cucumber (PI 183967)carcpiB0632
Carg09139Cucumber (Chinese Long) v2carcuB0623
Carg09139Cucumber (Chinese Long) v3carcucB0630
Carg09139Bottle gourd (USVL1VR-Ls)carlsiB538
Carg09139Melon (DHL92) v3.5.1carmeB0597
Carg09139Melon (DHL92) v3.5.1carmeB0598
Carg09139Melon (DHL92) v3.6.1carmedB0604
Carg09139Melon (DHL92) v3.6.1carmedB0605
Carg09139Watermelon (Charleston Gray)carwcgB0579
Carg09139Watermelon (97103) v1carwmB0592
Carg09139Watermelon (97103) v2carwmbB0621
Carg09139Wax gourdcarwgoB0705