Carg08917 (gene) Silver-seed gourd

Overview
NameCarg08917
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger protein, putative
LocationCucurbita_argyrosperma_scaffold_020 : 744383 .. 744892 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGAAGAACAGCCTTTACAAGTTGCTGAATCCAGCAGTGTTGAAATGGAAGAAACCCCATCAAGAATCTTCCCTTGTTTGTTCTGTTCAAGGAAGTTTCAAACCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGCGCACTGCCGTGAGGAAGGCCAAGCGGATATCTGATTACTCCTCCTCGTCGGCGTCGTCACGGCCATTGTCGGTATTTGCAGGCAGCCAACAGCTTCATCATCCAGCTATATTGCCACATCCAATGTACATTGCAGCTCATGGAGCTAGTCTTCATTGTTTCCCCAATAGCCAACAAGTGTTCTATGATGGCTTGGGAGTTGTTCCCAAGTTTGAGGACATGGTTTACTATGGTGGGGTTTGTTCATACAATAGGTATCAATGTGGGGAAGATGAAGAACATGTGTTGAATTGGCAGAGAAGCATAAAGAAAGACAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG

mRNA sequence

ATGGAAGATGAAGAACAGCCTTTACAAGTTGCTGAATCCAGCAGTGTTGAAATGGAAGAAACCCCATCAAGAATCTTCCCTTGTTTGTTCTGTTCAAGGAAGTTTCAAACCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGCGCACTGCCGTGAGGAAGGCCAAGCGGATATCTGATTACTCCTCCTCGTCGGCGTCGTCACGGCCATTGTCGGTATTTGCAGGCAGCCAACAGCTTCATCATCCAGCTATATTGCCACATCCAATGTACATTGCAGCTCATGGAGCTAGTCTTCATTGTTTCCCCAATAGCCAACAAGTGTTCTATGATGGCTTGGGAGTTGTTCCCAAGTTTGAGGACATGGTTTACTATGGTGGGGTTTGTTCATACAATAGGTATCAATGTGGGGAAGATGAAGAACATGTGTTGAATTGGCAGAGAAGCATAAAGAAAGACAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG

Coding sequence (CDS)

ATGGAAGATGAAGAACAGCCTTTACAAGTTGCTGAATCCAGCAGTGTTGAAATGGAAGAAACCCCATCAAGAATCTTCCCTTGTTTGTTCTGTTCAAGGAAGTTTCAAACCTCTCAAGCTTTAGGAGGCCATCAAAATGCTCACAAGAAAGAGCGCACTGCCGTGAGGAAGGCCAAGCGGATATCTGATTACTCCTCCTCGTCGGCGTCGTCACGGCCATTGTCGGTATTTGCAGGCAGCCAACAGCTTCATCATCCAGCTATATTGCCACATCCAATGTACATTGCAGCTCATGGAGCTAGTCTTCATTGTTTCCCCAATAGCCAACAAGTGTTCTATGATGGCTTGGGAGTTGTTCCCAAGTTTGAGGACATGGTTTACTATGGTGGGGTTTGTTCATACAATAGGTATCAATGTGGGGAAGATGAAGAACATGTGTTGAATTGGCAGAGAAGCATAAAGAAAGACAAGGAAAAAGAACAAAAACTTGATCTTTCTCTTCATTTATAG

Protein sequence

MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
Homology
[Close]
BLAST of Carg08917 vs. NCBI nr
Match: XP_023532770.1 (protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.9 bits (860), Expect = 8.0e-89
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           MEDEEQPL VAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR
Sbjct: 93  MEDEEQPLHVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 152

Query: 61  ISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVP 120
           ISDYSSSS SSRPLSVFAGSQQLHHPAILPHPMYIAAHGA+LHCFPNSQQVFYDGLGVVP
Sbjct: 153 ISDYSSSSTSSRPLSVFAGSQQLHHPAILPHPMYIAAHGANLHCFPNSQQVFYDGLGVVP 212

Query: 121 KFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 170
           KFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL
Sbjct: 213 KFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 261

[Close]
BLAST of Carg08917 vs. NCBI nr
Match: XP_022996351.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-87
Identity = 164/169 (97.04%), Postives = 167/169 (98.82%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR
Sbjct: 95  MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 154

Query: 61  ISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVP 120
           ISDYSSSS SSRPLSVFAG+QQLHHPAILPHPMYIAAHG +LHCFPNSQQVFYDGLGVVP
Sbjct: 155 ISDYSSSSTSSRPLSVFAGNQQLHHPAILPHPMYIAAHGPNLHCFPNSQQVFYDGLGVVP 214

Query: 121 KFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 170
           KFEDMVYYGGVCSYNRYQCGEDEE+VLNWQRSIKKDKEKEQKLDLSLHL
Sbjct: 215 KFEDMVYYGGVCSYNRYQCGEDEENVLNWQRSIKKDKEKEQKLDLSLHL 263

[Close]
BLAST of Carg08917 vs. NCBI nr
Match: XP_022931139.1 (protein LATE FLOWERING [Cucurbita moschata])

HSP 1 Score: 327.0 bits (837), Expect = 3.7e-86
Identity = 162/172 (94.19%), Postives = 169/172 (98.26%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR
Sbjct: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60

Query: 61  ISDYSSSSA---SSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLG 120
           +SDYSSSS+   SSRPLSVFAG+QQLHHPAILPHP+YIAAHGA+LHCFPN+QQVFYDGLG
Sbjct: 61  LSDYSSSSSSSLSSRPLSVFAGNQQLHHPAILPHPVYIAAHGANLHCFPNNQQVFYDGLG 120

Query: 121 VVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 170
           VVPKFEDMVYYGGVCSYNRYQCGEDE+HVLNWQRSIKKDKEKEQKLDLSLHL
Sbjct: 121 VVPKFEDMVYYGGVCSYNRYQCGEDEDHVLNWQRSIKKDKEKEQKLDLSLHL 172

[Close]
BLAST of Carg08917 vs. NCBI nr
Match: KGN58336.1 (hypothetical protein Csa_3G624040 [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 108/162 (66.67%), Postives = 122/162 (75.31%), Query Frame = 0 

Query: 18  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLS-- 77
           MEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRI DYS S  S  P    
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 78  -VFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSY 137
            VFA SQQ HHP +LPHP+YIA HGA+LHCFPN+QQ+ Y         E+MV+ GGVC  
Sbjct: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCPS 120

Query: 138 NRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL 170
           NRY   +DEE++LNW+R+IKK       DKEKEQKLDLSLHL
Sbjct: 121 NRYH--QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]
BLAST of Carg08917 vs. NCBI nr
Match: XP_008447640.1 (PREDICTED: protein LATE FLOWERING-like [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-48
Identity = 119/189 (62.96%), Postives = 136/189 (71.96%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSS---------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKE 60
           ME EE   +V E  +         +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-ILPHPMYIAAHGASLHCFPN 120
           RTA RKAKRI DYS S  S  S P S VFA SQQ HHPA +LPHP+YIA HGA+LHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120

Query: 121 SQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKE 170
           +QQ+ Y         E+MV+ GGVCS NRY   +DEE++LNW+R+IK        DKEKE
Sbjct: 121 NQQLLY---------ENMVFCGGVCSSNRYH--QDEENLLNWERNIKNDLSRINHDKEKE 178

[Close]
BLAST of Carg08917 vs. TAIR10
Match: AT5G48890.1 (C2H2-like zinc finger protein)

HSP 1 Score: 101.7 bits (252), Expect = 4.6e-22
Identity = 70/175 (40.00%), Postives = 92/175 (52.57%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           +E EE+     E++  +   +  RIFPCLFCSRKF +SQALGGHQNAHKKERTA R+AKR
Sbjct: 10  VEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKR 69

Query: 61  ISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPN---SQQVFYDG-- 120
             D+ +++     L VF  S   HH  IL +P       AS+ CFP       +F     
Sbjct: 70  AYDFVNNNDFLHTLPVFLSSPSQHHLTILGYPA-----SASVACFPTVHPDHPIFKSSGS 129

Query: 121 -LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 170
            + +    +     GG C   R    +   +V+N       DK K+Q LDLSLHL
Sbjct: 130 HVVLATSHQGRDCKGGYCCQQRVDILDHHYNVVN------SDKGKDQCLDLSLHL 173

[Close]
BLAST of Carg08917 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 12  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSS 71
           ++ S + E  P R+F C +C RKF +SQALGGHQNAHK+ERT  ++A  +       +  
Sbjct: 46  DTKSTKCEANP-RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRP 105

Query: 72  SSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYD 115
            + +S  L + A S  LHH    P P+    H      F N+  +F+D
Sbjct: 106 YTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGY--FGNTVPLFFD 150

[Close]
BLAST of Carg08917 vs. TAIR10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 24 RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK 58
          R+FPC +C RKF TSQALGGHQNAHK+ER A R+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

[Close]
BLAST of Carg08917 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 58.2 bits (139), Expect = 5.9e-09
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 24  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA 79
           R+F C +C RKF +SQALGGHQNAHK+ERT  ++ +    Y   + SS P S FA
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ----YYKMTLSSLPSSAFA 116

[Close]
BLAST of Carg08917 vs. TAIR10
Match: AT1G66140.1 (zinc finger protein 4)

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 24  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI 62
           R+F C +C RKF +SQALGGHQNAHK+ERT  ++A R+
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]
BLAST of Carg08917 vs. Swiss-Prot
Match: sp|Q9FKA9|LATE_ARATH (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.3e-21
Identity = 70/175 (40.00%), Postives = 92/175 (52.57%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           +E EE+     E++  +   +  RIFPCLFCSRKF +SQALGGHQNAHKKERTA R+AKR
Sbjct: 10  VEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKR 69

Query: 61  ISDYSSSSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPN---SQQVFYDG-- 120
             D+ +++     L VF  S   HH  IL +P       AS+ CFP       +F     
Sbjct: 70  AYDFVNNNDFLHTLPVFLSSPSQHHLTILGYPA-----SASVACFPTVHPDHPIFKSSGS 129

Query: 121 -LGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKKDKEKEQKLDLSLHL 170
            + +    +     GG C   R    +   +V+N       DK K+Q LDLSLHL
Sbjct: 130 HVVLATSHQGRDCKGGYCCQQRVDILDHHYNVVN------SDKGKDQCLDLSLHL 173

[Close]
BLAST of Carg08917 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 0 

Query: 12  ESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRIS-----DYSS 71
           ++ S + E  P R+F C +C RKF +SQALGGHQNAHK+ERT  ++A  +       +  
Sbjct: 46  DTKSTKCEANP-RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRP 105

Query: 72  SSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYD 115
            + +S  L + A S  LHH    P P+    H      F N+  +F+D
Sbjct: 106 YTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGY--FGNTVPLFFD 150

[Close]
BLAST of Carg08917 vs. Swiss-Prot
Match: sp|Q9FFX4|KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-08
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0 

Query: 24 RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRK 58
          R+FPC +C RKF TSQALGGHQNAHK+ER A R+
Sbjct: 36 RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

[Close]
BLAST of Carg08917 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 24  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLSVFA 79
           R+F C +C RKF +SQALGGHQNAHK+ERT  ++ +    Y   + SS P S FA
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ----YYKMTLSSLPSSAFA 116

[Close]
BLAST of Carg08917 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 24  RIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRI 62
           R+F C +C RKF +SQALGGHQNAHK+ERT  ++A R+
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]
BLAST of Carg08917 vs. TrEMBL
Match: tr|A0A0A0LE19|A0A0A0LE19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.2e-49
Identity = 108/162 (66.67%), Postives = 122/162 (75.31%), Query Frame = 0 

Query: 18  MEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKRISDYSSSSASSRPLS-- 77
           MEE PSR+FPCLFCSRKFQ+SQALGGHQNAHKKERTA RKAKRI DYS S  S  P    
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 78  -VFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGVVPKFEDMVYYGGVCSY 137
            VFA SQQ HHP +LPHP+YIA HGA+LHCFPN+QQ+ Y         E+MV+ GGVC  
Sbjct: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLY---------ENMVFCGGVCPS 120

Query: 138 NRYQCGEDEEHVLNWQRSIKK-------DKEKEQKLDLSLHL 170
           NRY   +DEE++LNW+R+IKK       DKEKEQKLDLSLHL
Sbjct: 121 NRYH--QDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]
BLAST of Carg08917 vs. TrEMBL
Match: tr|A0A1S3BIU8|A0A1S3BIU8_CUCME (protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 119/189 (62.96%), Postives = 136/189 (71.96%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSS---------VEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKE 60
           ME EE   +V E  +         +EMEETPSR+FPCLFCSRKFQ+SQALGGHQNAHKKE
Sbjct: 1   MEYEESLSKVVEIETNNNDIVEKVLEMEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKE 60

Query: 61  RTAVRKAKRISDYSSSSAS--SRPLS-VFAGSQQLHHPA-ILPHPMYIAAHGASLHCFPN 120
           RTA RKAKRI DYS S  S  S P S VFA SQQ HHPA +LPHP+YIA HGA+LHCFPN
Sbjct: 61  RTAARKAKRICDYSVSPPSPFSAPTSLVFAASQQQHHPAGLLPHPVYIATHGANLHCFPN 120

Query: 121 SQQVFYDGLGVVPKFEDMVYYGGVCSYNRYQCGEDEEHVLNWQRSIKK-------DKEKE 170
           +QQ+ Y         E+MV+ GGVCS NRY   +DEE++LNW+R+IK        DKEKE
Sbjct: 121 NQQLLY---------ENMVFCGGVCSSNRYH--QDEENLLNWERNIKNDLSRINHDKEKE 178

[Close]
BLAST of Carg08917 vs. TrEMBL
Match: tr|M5W5G3|M5W5G3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G206700 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.4e-35
Identity = 106/212 (50.00%), Postives = 125/212 (58.96%), Query Frame = 0 

Query: 1   MEDEEQ--PLQVAESSSVEMEE--TPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVR 60
           MEDE+Q     V + S+ E  +  T SR+FPCLFCSRKF +SQALGGHQNAHKKERTA R
Sbjct: 1   MEDEDQKGTTHVDQESNEEDRDTTTTSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAAR 60

Query: 61  KAKRISDYSSS------SASSRPLSVFAGSQQLHHPAILPHP-MYIAAHGASLHCFPNSQ 120
           KAKR S+Y+SS      S +++P  VFA +   HHP  L HP MYI AH A+L  FP+ Q
Sbjct: 61  KAKRASEYASSMNFPILSHTTQPPMVFAPNH--HHPLGLLHPSMYITAHAANLRYFPSPQ 120

Query: 121 QVFYDGLGV--VPKFEDMVYYGGVCS----YNRYQCGEDEEHVLNWQRSIK--------- 170
           Q   DG G     KFE++ YYGG CS     N Y+C EDE+  LNWQRS +         
Sbjct: 121 QFSSDGFGSNGGAKFENLAYYGGNCSSSNNINGYKCEEDEQSFLNWQRSTRYNGFSGXXX 180

[Close]
BLAST of Carg08917 vs. TrEMBL
Match: tr|A0A2P5CWE5|A0A2P5CWE5_9ROSA (Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_271120 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.4e-33
Identity = 100/200 (50.00%), Postives = 119/200 (59.50%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           MEDEE+  QV  S+   +E+T SR+FPCLFCSRKF +SQALGGHQNAHKKERTA RKAKR
Sbjct: 1   MEDEEKTTQVGVSN---VEDTTSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKR 60

Query: 61  ISDYSSSSASSRP--LSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYDGLGV 120
            S+ +  S SS P    VFA +Q   H  +L  PMYI AH AS   FP + Q F +  G 
Sbjct: 61  ASECTPLSFSSHPQQTMVFAPNQ---HVGLLHPPMYINAHAASFRYFPTTHQ-FSERFGS 120

Query: 121 --VPKFEDMVYYGGVCS--YNRYQCGEDEEHVLNWQRSIK-------------------- 170
              P+FE+ VYYGG C+   + Y C EDE+  LNWQRSI+                    
Sbjct: 121 NGAPRFENFVYYGGSCTSLNSGYPCEEDEQSFLNWQRSIRCNGFGGGGSSQHGSSVMTIN 180

[Close]
BLAST of Carg08917 vs. TrEMBL
Match: tr|A0A067JR31|A0A067JR31_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17574 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.9e-31
Identity = 94/201 (46.77%), Postives = 120/201 (59.70%), Query Frame = 0 

Query: 1   MEDEEQPLQVAESSSVEMEETPSRIFPCLFCSRKFQTSQALGGHQNAHKKERTAVRKAKR 60
           ME EE   +V   ++VE +ET +R+FPCLFCSRKF +SQALGGHQNAHKKER A RKAKR
Sbjct: 1   MEIEE---KVCHQTNVE-DETRTRVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKR 60

Query: 61  ISDYSS-----SSASSRPLSVFAGSQQLHHPAILPHPMYIAAHGASLHCFPNSQQVFYD- 120
            S+Y++       ++S P+ VFA S   HH  +L   MYI AH A L C+PN Q +    
Sbjct: 61  ASEYATPPPPLPPSASLPM-VFAPSHN-HHLGLLHPSMYITAHAAPLQCYPNHQFISNSF 120

Query: 121 GLGVVPKFEDMVYYGGVCSYNRY---QCGEDEEHVLNWQRSIK----------------- 170
           G    PKF++ ++YGG CS +RY   QC E++   LNWQRSI+                 
Sbjct: 121 GSNGAPKFDNGIFYGGNCSSHRYHNHQCEEEDPSFLNWQRSIRFNGASNQNSAIVANNAH 180

The following BLAST results are available for this feature:
BLAST of Carg08917 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532770.18.0e-8998.22protein LATE FLOWERING-like [Cucurbita pepo subsp. pepo][more]
XP_022996351.11.2e-8797.04protein LATE FLOWERING-like [Cucurbita maxima][more]
XP_022931139.13.7e-8694.19protein LATE FLOWERING [Cucurbita moschata][more]
KGN58336.11.4e-4866.67hypothetical protein Csa_3G624040 [Cucumis sativus][more]
XP_008447640.12.4e-4862.96PREDICTED: protein LATE FLOWERING-like [Cucumis melo][more]
BLAST of Carg08917 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48890.14.6e-2240.00C2H2-like zinc finger protein[more]
AT1G24625.11.1e-1037.04zinc finger protein 7[more]
AT5G14010.12.0e-0973.53C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G80730.15.9e-0952.73zinc-finger protein 1[more]
AT1G66140.17.7e-0963.16zinc finger protein 4[more]
BLAST of Carg08917 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FKA9|LATE_ARATH8.3e-2140.00Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1[more]
sp|Q39266|ZFP7_ARATH1.9e-0937.04Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
sp|Q9FFX4|KNU_ARATH3.6e-0873.53Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1[more]
sp|Q42485|ZFP1_ARATH1.1e-0752.73Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
sp|Q39263|ZFP4_ARATH1.4e-0763.16Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
BLAST of Carg08917 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LE19|A0A0A0LE19_CUCSA9.2e-4966.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G624040 PE=4 SV=1[more]
tr|A0A1S3BIU8|A0A1S3BIU8_CUCME1.6e-4862.96protein LATE FLOWERING-like OS=Cucumis melo OX=3656 GN=LOC103490048 PE=4 SV=1[more]
tr|M5W5G3|M5W5G3_PRUPE4.4e-3550.00Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G206700 PE=4 SV=1[more]
tr|A0A2P5CWE5|A0A2P5CWE5_9ROSA2.4e-3350.00Zinc finger, C2H OS=Trema orientalis OX=63057 GN=TorRG33x02_271120 PE=4 SV=1[more]
tr|A0A067JR31|A0A067JR31_JATCU3.9e-3146.77Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17574 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08917-RACarg08917-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 6..78
e-value: 1.3E-6
score: 30.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..72
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 9..169
NoneNo IPR availablePANTHERPTHR26374:SF311C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEIN-RELATEDcoord: 9..169
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 28..48
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 26..53
score: 10.928
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 22..53

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08917Cla002741Watermelon (97103) v1carwmB0779
Carg08917Csa3G624040Cucumber (Chinese Long) v2carcuB0796
Carg08917MELO3C012789Melon (DHL92) v3.5.1carmeB0772
Carg08917ClCG07G001730Watermelon (Charleston Gray)carwcgB0760
Carg08917Cucsa.140350Cucumber (Gy14) v1carcgyB0884
Carg08917CmaCh02G016970Cucurbita maxima (Rimu)carcmaB1084
Carg08917CmaCh19G001370Cucurbita maxima (Rimu)carcmaB1082
Carg08917CmoCh19G001560Cucurbita moschata (Rifu)carcmoB1055
Carg08917CmoCh02G017410Cucurbita moschata (Rifu)carcmoB1057
Carg08917Lsi05G010950Bottle gourd (USVL1VR-Ls)carlsiB717
Carg08917Cp4.1LG15g01200Cucurbita pepo (Zucchini)carcpeB1094
Carg08917CsGy3G025380Cucumber (Gy14) v2carcgybB0773
Carg08917MELO3C012789.2Melon (DHL92) v3.6.1carmedB0786
Carg08917CsaV3_3G028730Cucumber (Chinese Long) v3carcucB0819
Carg08917Cla97C07G129980Watermelon (97103) v2carwmbB0821
Carg08917Bhi05G000079Wax gourdcarwgoB0916
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg08917Carg05404Silver-seed gourdcarcarB086
The following block(s) are covering this gene:
GeneOrganismBlock
Carg08917Melon (DHL92) v3.5.1carmeB0780
Carg08917Watermelon (Charleston Gray)carwcgB0757
Carg08917Watermelon (97103) v1carwmB0782
Carg08917Watermelon (97103) v1carwmB0785
Carg08917Watermelon (97103) v2carwmbB0817
Carg08917Watermelon (97103) v2carwmbB0819
Carg08917Wax gourdcarwgoB0911
Carg08917Silver-seed gourdcarcarB264
Carg08917Silver-seed gourdcarcarB273
Carg08917Silver-seed gourdcarcarB610
Carg08917Silver-seed gourdcarcarB615
Carg08917Cucumber (Gy14) v2carcgybB0772
Carg08917Cucumber (Gy14) v1carcgyB0887
Carg08917Cucurbita maxima (Rimu)carcmaB1075
Carg08917Cucurbita maxima (Rimu)carcmaB1079
Carg08917Cucurbita maxima (Rimu)carcmaB1086
Carg08917Cucurbita maxima (Rimu)carcmaB1089
Carg08917Cucurbita maxima (Rimu)carcmaB1090
Carg08917Cucurbita moschata (Rifu)carcmoB1049
Carg08917Cucurbita moschata (Rifu)carcmoB1052
Carg08917Cucurbita moschata (Rifu)carcmoB1058
Carg08917Cucurbita moschata (Rifu)carcmoB1061
Carg08917Cucurbita moschata (Rifu)carcmoB1062
Carg08917Cucurbita pepo (Zucchini)carcpeB1087
Carg08917Cucurbita pepo (Zucchini)carcpeB1096
Carg08917Cucurbita pepo (Zucchini)carcpeB1097
Carg08917Cucurbita pepo (Zucchini)carcpeB1098
Carg08917Cucurbita pepo (Zucchini)carcpeB1099
Carg08917Cucurbita pepo (Zucchini)carcpeB1101
Carg08917Wild cucumber (PI 183967)carcpiB0814
Carg08917Wild cucumber (PI 183967)carcpiB0816
Carg08917Cucumber (Chinese Long) v3carcucB0817
Carg08917Bottle gourd (USVL1VR-Ls)carlsiB713