Csa3G624040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G624040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger protein, putative; contains IPR007087 (Zinc finger, C2H2)
LocationChr3 : 24171936 .. 24172391 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAGCCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCAAGGAAAGCCAAGCGAATCTGCGATTACTCGGTGTCACCACCATCACCGTTCCCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTCCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTCTCTCTCCATTTATAG

mRNA sequence

ATGGAAGAAGCCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCAAGGAAAGCCAAGCGAATCTGCGATTACTCGGTGTCACCACCATCACCGTTCCCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTCCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTCTCTCTCCATTTATAG

Coding sequence (CDS)

ATGGAAGAAGCCCCATCAAGAGTTTTCCCCTGTTTGTTCTGTTCAAGAAAGTTTCAAAGCTCCCAAGCTTTAGGAGGCCATCAAAATGCTCATAAGAAAGAGAGGACTGCCGCAAGGAAAGCCAAGCGAATCTGCGATTACTCGGTGTCACCACCATCACCGTTCCCGGCACCGACATCGTTGGTTTTTGCAGCTAGCCAGCAGCAACATCATCCAGGGCTATTGCCACATCCTGTTTATATTGCTACTCATGGAGCTAATCTTCATTGTTTCCCTAATAACCAACAATTGTTGTATGAAAACATGGTTTTTTGTGGTGGGGTTTGTCCAAGCAATAGATATCATCAAGATGAAGAAAATTTGTTGAATTGGGAGAGAAACATAAAGAAAGATCTTAGTAGGATAAATCATGATAAGGAAAAAGAGCAAAAACTTGATCTCTCTCTCCATTTATAG

Protein sequence

MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL*
Homology
[Close]
BLAST of Csa3G624040 vs. Swiss-Prot
Match: LATE_ARATH (Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 66/158 (41.77%), Postives = 82/158 (51.90%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAAS 66
           R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S
Sbjct: 33  RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLP---VFLSS 92

Query: 67  QQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNR 126
             QHH  +L +P       A++ CFP       ++ +F              G  C    
Sbjct: 93  PSQHHLTILGYPA-----SASVACFPTVHP---DHPIFKSSGSHVVLATSHQGRDCKGGY 152

Query: 127 YHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 152
             Q   ++L+   N+      +N DK K+Q LDLSLHL
Sbjct: 153 CCQQRVDILDHHYNV------VNSDKGKDQCLDLSLHL 173

[Close]
BLAST of Csa3G624040 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 1 

Query: 3   EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLV 62
           EA  RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S  
Sbjct: 53  EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS-- 112

Query: 63  FAASQQQHHPGLLPH 78
             +   Q H GLL H
Sbjct: 113 --SLGMQAHSGLLHH 123

[Close]
BLAST of Csa3G624040 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.8e-09
Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 61
           RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Sbjct: 50  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFS 103

[Close]
BLAST of Csa3G624040 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 6.5e-09
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI 45
           RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]
BLAST of Csa3G624040 vs. Swiss-Prot
Match: KNU_ARATH (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08
Identity = 26/37 (70.27%), Postives = 29/37 (78.38%), Query Frame = 1 

Query: 4  APSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARK 41
          A  R+FPC +C RKF +SQALGGHQNAHK+ER AAR+
Sbjct: 33 ASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

[Close]
BLAST of Csa3G624040 vs. TrEMBL
Match: A0A0A0LE19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624040 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-85
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

Query: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60
           MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN 120
           LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN
Sbjct: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN 120

Query: 121 LLNWERNIKKDLSRINHDKEKEQKLDLSLHL 152
           LLNWERNIKKDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 LLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]
BLAST of Csa3G624040 vs. TrEMBL
Match: A0A067JR31_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17574 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-33
Identity = 87/184 (47.28%), Postives = 112/184 (60.87%), Query Frame = 1 

Query: 2   EEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSL 61
           +E  +RVFPCLFCSRKF SSQALGGHQNAHKKER AARKAKR  +Y+ +PP P P   SL
Sbjct: 15  DETRTRVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKRASEYA-TPPPPLPPSASL 74

Query: 62  --VFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQL----------LYENMVFCGGVC 121
             VFA S   HH GLL   +YI  H A L C+PN+Q +           ++N +F GG C
Sbjct: 75  PMVFAPS-HNHHLGLLHPSMYITAHAAPLQCYPNHQFISNSFGSNGAPKFDNGIFYGGNC 134

Query: 122 PSNRYH-----QDEENLLNWERNIK-----------------KDLSRINHDKEKEQKLDL 152
            S+RYH     +++ + LNW+R+I+                 ++L+  N D +K+ KLDL
Sbjct: 135 SSHRYHNHQCEEEDPSFLNWQRSIRFNGASNQNSAIVANNAHQNLANTN-DNKKDPKLDL 194

[Close]
BLAST of Csa3G624040 vs. TrEMBL
Match: B9GNG7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23970g PE=4 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 8.5e-32
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 1 

Query: 2   EEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSL 61
           E+  +RVFPCLFCSRKF SSQALGGHQNAHKKER AARK +R+ +Y+ SPP  FP    +
Sbjct: 14  EDTAARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVSEYAPSPPPTFP----V 73

Query: 62  VFAASQQQHHPGLLPHPVYIAT-HGANLHCFPNNQQL-----------LYENMVFCGGVC 121
           +F+ S   HH GLL   +Y +T H ANLHC P + Q                ++F GG C
Sbjct: 74  IFSPS---HHLGLLHPSMYTSTAHAANLHCHPTHDQFSDRLGSSGAARFDSGVLFYGGSC 133

Query: 122 PSNRY------HQDEENLLNWERNIK------------KDLSRINHDKE----KEQKLDL 152
            S+RY       +DE++LLNW+R+I+              ++  NH+ E    K+QKLDL
Sbjct: 134 SSDRYDHHQYDQEDEQSLLNWQRSIRCPGFNGGGPNHHLSMAIDNHNMEIRNDKDQKLDL 190

[Close]
BLAST of Csa3G624040 vs. TrEMBL
Match: A0A061DMR2_THECC (C2H2-like zinc finger protein, putative OS=Theobroma cacao GN=TCM_003028 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.1e-30
Identity = 84/185 (45.41%), Postives = 111/185 (60.00%), Query Frame = 1 

Query: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60
           +++  +RVFPCLFCSRKF SSQALGGHQNAHKKER+AARKAKR  +Y    P+ F +  +
Sbjct: 92  VDDGTTRVFPCLFCSRKFYSSQALGGHQNAHKKERSAARKAKRASEYG---PTSFSSSPT 151

Query: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQL----------LYEN-MVFCGGVC 120
           L    +   HH G L  P+YI  H ANL CFPNN  +           ++N +VF GG  
Sbjct: 152 LPMVYAPASHHLGTLHPPMYITAHAANLRCFPNNHHISDRFGSNGAARFDNKVVFYGG-- 211

Query: 121 PSNRYH--------QDEENLLNWERNIK--KDLSR-------------INHDKEKEQKLD 152
            SN YH        ++E++ LNW+R+I+  + LS+              +H K+K+QKLD
Sbjct: 212 SSNGYHHHHHHQFEEEEQSHLNWQRSIRCNRGLSQRLAMADSNQGAGSADH-KDKDQKLD 270

[Close]
BLAST of Csa3G624040 vs. TrEMBL
Match: M5W5G3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025814mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.9e-30
Identity = 87/186 (46.77%), Postives = 107/186 (57.53%), Query Frame = 1 

Query: 6   SRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS---LV 65
           SRVFPCLFCSRKF SSQALGGHQNAHKKERTAARKAKR  +Y+ S   P  + T+   +V
Sbjct: 27  SRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRASEYASSMNFPILSHTTQPPMV 86

Query: 66  FAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQL-----------LYENMVFCGGVCP 125
           FA +   HHP GLL   +YI  H ANL  FP+ QQ             +EN+ + GG C 
Sbjct: 87  FAPN--HHHPLGLLHPSMYITAHAANLRYFPSPQQFSSDGFGSNGGAKFENLAYYGGNCS 146

Query: 126 SN------RYHQDEENLLNWERNIK--------------KDLSRINH-----DKEKEQKL 152
           S+      +  +DE++ LNW+R+ +                +   NH     DK KEQKL
Sbjct: 147 SSNNINGYKCEEDEQSFLNWQRSTRYNGFSGGGGGSSQHSSVKNGNHSPGIGDKGKEQKL 206

[Close]
BLAST of Csa3G624040 vs. TAIR10
Match: AT5G48890.1 (AT5G48890.1 C2H2-like zinc finger protein)

HSP 1 Score: 100.5 bits (249), Expect = 9.3e-22
Identity = 66/158 (41.77%), Postives = 82/158 (51.90%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLVFAAS 66
           R+FPCLFCSRKF SSQALGGHQNAHKKERTAAR+AKR  D+  +       P   VF +S
Sbjct: 33  RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNNDFLHTLP---VFLSS 92

Query: 67  QQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVF-------------CGGVCPSNR 126
             QHH  +L +P       A++ CFP       ++ +F              G  C    
Sbjct: 93  PSQHHLTILGYPA-----SASVACFPTVHP---DHPIFKSSGSHVVLATSHQGRDCKGGY 152

Query: 127 YHQDEENLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 152
             Q   ++L+   N+      +N DK K+Q LDLSLHL
Sbjct: 153 CCQQRVDILDHHYNV------VNSDKGKDQCLDLSLHL 173

[Close]
BLAST of Csa3G624040 vs. TAIR10
Match: AT5G01860.1 (AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1 

Query: 3   EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI-CDY-SVSPPSPFPAPTS 62
           EA +RVF C FC ++F +SQALGGHQNAHK+ER+ A++ K I  +Y  +S  S +P P+ 
Sbjct: 61  EAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEINYPELSIYSQYP-PSG 120

Query: 63  LVFAASQQQHHPGLLPHP 79
           L F++S  Q+  G+  +P
Sbjct: 121 LSFSSSSSQYDLGVRYNP 137

[Close]
BLAST of Csa3G624040 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 64.3 bits (155), Expect = 7.4e-11
Identity = 36/75 (48.00%), Postives = 42/75 (56.00%), Query Frame = 1 

Query: 3   EAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSLV 62
           EA  RVF C +C RKF SSQALGGHQNAHK+ERT A++A  +         P+   +S  
Sbjct: 53  EANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS-- 112

Query: 63  FAASQQQHHPGLLPH 78
             +   Q H GLL H
Sbjct: 113 --SLGMQAHSGLLHH 123

[Close]
BLAST of Csa3G624040 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-10
Identity = 31/54 (57.41%), Postives = 35/54 (64.81%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 61
           RVF C +C RKF SSQALGGHQNAHK ERT A+K++ +   S +  S  P P S
Sbjct: 50  RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFS 103

[Close]
BLAST of Csa3G624040 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 62.0 bits (149), Expect = 3.7e-10
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 1 

Query: 7   RVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRI 45
           RVF C +C RKF SSQALGGHQNAHK+ERT A++A R+
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]
BLAST of Csa3G624040 vs. NCBI nr
Match: gi|700203203|gb|KGN58336.1| (hypothetical protein Csa_3G624040 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.5e-85
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

Query: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60
           MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS
Sbjct: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60

Query: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN 120
           LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN
Sbjct: 61  LVFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEEN 120

Query: 121 LLNWERNIKKDLSRINHDKEKEQKLDLSLHL 152
           LLNWERNIKKDLSRINHDKEKEQKLDLSLHL
Sbjct: 121 LLNWERNIKKDLSRINHDKEKEQKLDLSLHL 151

[Close]
BLAST of Csa3G624040 vs. NCBI nr
Match: gi|659093648|ref|XP_008447640.1| (PREDICTED: zinc finger protein 1-like [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 4.9e-81
Identity = 147/152 (96.71%), Postives = 147/152 (96.71%), Query Frame = 1 

Query: 1   MEEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTS 60
           MEE PSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPF APTS
Sbjct: 27  MEETPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFSAPTS 86

Query: 61  LVFAASQQQHHP-GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCPSNRYHQDEE 120
           LVFAASQQQHHP GLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVC SNRYHQDEE
Sbjct: 87  LVFAASQQQHHPAGLLPHPVYIATHGANLHCFPNNQQLLYENMVFCGGVCSSNRYHQDEE 146

Query: 121 NLLNWERNIKKDLSRINHDKEKEQKLDLSLHL 152
           NLLNWERNIK DLSRINHDKEKEQKLDLSLHL
Sbjct: 147 NLLNWERNIKNDLSRINHDKEKEQKLDLSLHL 178

[Close]
BLAST of Csa3G624040 vs. NCBI nr
Match: gi|802716879|ref|XP_012085159.1| (PREDICTED: zinc finger protein 3 [Jatropha curcas])

HSP 1 Score: 148.7 bits (374), Expect = 8.4e-33
Identity = 87/184 (47.28%), Postives = 112/184 (60.87%), Query Frame = 1 

Query: 2   EEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSL 61
           +E  +RVFPCLFCSRKF SSQALGGHQNAHKKER AARKAKR  +Y+ +PP P P   SL
Sbjct: 15  DETRTRVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKRASEYA-TPPPPLPPSASL 74

Query: 62  --VFAASQQQHHPGLLPHPVYIATHGANLHCFPNNQQL----------LYENMVFCGGVC 121
             VFA S   HH GLL   +YI  H A L C+PN+Q +           ++N +F GG C
Sbjct: 75  PMVFAPS-HNHHLGLLHPSMYITAHAAPLQCYPNHQFISNSFGSNGAPKFDNGIFYGGNC 134

Query: 122 PSNRYH-----QDEENLLNWERNIK-----------------KDLSRINHDKEKEQKLDL 152
            S+RYH     +++ + LNW+R+I+                 ++L+  N D +K+ KLDL
Sbjct: 135 SSHRYHNHQCEEEDPSFLNWQRSIRFNGASNQNSAIVANNAHQNLANTN-DNKKDPKLDL 194

[Close]
BLAST of Csa3G624040 vs. NCBI nr
Match: gi|566159690|ref|XP_002301764.2| (hypothetical protein POPTR_0002s23970g [Populus trichocarpa])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-31
Identity = 85/184 (46.20%), Postives = 110/184 (59.78%), Query Frame = 1 

Query: 2   EEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSL 61
           E+  +RVFPCLFCSRKF SSQALGGHQNAHKKER AARK +R+ +Y+ SPP  FP    +
Sbjct: 14  EDTAARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVSEYAPSPPPTFP----V 73

Query: 62  VFAASQQQHHPGLLPHPVYIAT-HGANLHCFPNNQQL-----------LYENMVFCGGVC 121
           +F+ S   HH GLL   +Y +T H ANLHC P + Q                ++F GG C
Sbjct: 74  IFSPS---HHLGLLHPSMYTSTAHAANLHCHPTHDQFSDRLGSSGAARFDSGVLFYGGSC 133

Query: 122 PSNRY------HQDEENLLNWERNIK------------KDLSRINHDKE----KEQKLDL 152
            S+RY       +DE++LLNW+R+I+              ++  NH+ E    K+QKLDL
Sbjct: 134 SSDRYDHHQYDQEDEQSLLNWQRSIRCPGFNGGGPNHHLSMAIDNHNMEIRNDKDQKLDL 190

[Close]
BLAST of Csa3G624040 vs. NCBI nr
Match: gi|743834265|ref|XP_011024741.1| (PREDICTED: zinc finger protein 3-like [Populus euphratica])

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-30
Identity = 85/183 (46.45%), Postives = 108/183 (59.02%), Query Frame = 1 

Query: 2   EEAPSRVFPCLFCSRKFQSSQALGGHQNAHKKERTAARKAKRICDYSVSPPSPFPAPTSL 61
           E+  +RVFPCLFCSRKF SSQALGGHQNAHKKER AARK +R+ +Y+ SP   FP    +
Sbjct: 68  EDTTARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVSEYAPSPSPTFP----V 127

Query: 62  VFAASQQQHHPGLLPHPVYIAT-HGANLHCFPNNQQL----------LYENMVFCGGVCP 121
           +F+ S   HH GLL   +YI+T H ANL C P   Q            +++ VF GG C 
Sbjct: 128 IFSPS---HHLGLLHPSMYISTAHAANLQCHPTLDQFSDRLGSSGAARFDSGVFYGGSCS 187

Query: 122 SNRY------HQDEENLLNWERNI------------KKDLSRINHDKE----KEQKLDLS 152
           S+RY       +DE++LLNW R+I               ++  NH+ E    K+QKLDLS
Sbjct: 188 SDRYDHHQYDQEDEQSLLNWRRSIGCPGLNGGGPNHHLSMANGNHNVEIRNDKDQKLDLS 243

The following BLAST results are available for this feature:
BLAST of Csa3G624040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LATE_ARATH1.6e-2041.77Protein LATE FLOWERING OS=Arabidopsis thaliana GN=LATE PE=2 SV=1[more]
ZFP7_ARATH1.3e-0948.00Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP2_ARATH3.8e-0957.41Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
ZFP4_ARATH6.5e-0971.05Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
KNU_ARATH1.1e-0870.27Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1[more]
BLAST of Csa3G624040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE19_CUCSA1.7e-85100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G624040 PE=4 SV=1[more]
A0A067JR31_JATCU5.9e-3347.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17574 PE=4 SV=1[more]
B9GNG7_POPTR8.5e-3246.20Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s23970g PE=4 SV=2[more]
A0A061DMR2_THECC6.1e-3045.41C2H2-like zinc finger protein, putative OS=Theobroma cacao GN=TCM_003028 PE=4 SV... [more]
M5W5G3_PRUPE7.9e-3046.77Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025814mg PE=4 SV=1[more]
BLAST of Csa3G624040 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G48890.19.3e-2241.77 C2H2-like zinc finger protein[more]
AT5G01860.13.9e-1247.44 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G24625.17.4e-1148.00 zinc finger protein 7[more]
AT5G57520.12.1e-1057.41 zinc finger protein 2[more]
AT1G66140.13.7e-1071.05 zinc finger protein 4[more]
BLAST of Csa3G624040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700203203|gb|KGN58336.1|2.5e-85100.00hypothetical protein Csa_3G624040 [Cucumis sativus][more]
gi|659093648|ref|XP_008447640.1|4.9e-8196.71PREDICTED: zinc finger protein 1-like [Cucumis melo][more]
gi|802716879|ref|XP_012085159.1|8.4e-3347.28PREDICTED: zinc finger protein 3 [Jatropha curcas][more]
gi|566159690|ref|XP_002301764.2|1.2e-3146.20hypothetical protein POPTR_0002s23970g [Populus trichocarpa][more]
gi|743834265|ref|XP_011024741.1|3.0e-3046.45PREDICTED: zinc finger protein 3-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050789 regulation of biological process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G624040.1Csa3G624040.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 11..31
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 9..36
score: 1
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 6..36
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G624040Cla002741Watermelon (97103) v1cuwmB227
Csa3G624040MELO3C012789Melon (DHL92) v3.5.1cumeB225
Csa3G624040ClCG07G001730Watermelon (Charleston Gray)cuwcgB251
Csa3G624040Lsi05G010950Bottle gourd (USVL1VR-Ls)culsiB200
Csa3G624040MELO3C012789.2Melon (DHL92) v3.6.1cumedB217
Csa3G624040Cla97C07G129980Watermelon (97103) v2cuwmbB235
Csa3G624040Bhi05G000079Wax gourdcuwgoB306
Csa3G624040Cucsa.140350Cucumber (Gy14) v1cgycuB204
Csa3G624040CmaCh02G016970Cucurbita maxima (Rimu)cmacuB600
Csa3G624040CmaCh19G001370Cucurbita maxima (Rimu)cmacuB509
Csa3G624040CmoCh02G017410Cucurbita moschata (Rifu)cmocuB590
Csa3G624040CmoCh19G001560Cucurbita moschata (Rifu)cmocuB500
Csa3G624040Cp4.1LG15g01200Cucurbita pepo (Zucchini)cpecuB238
Csa3G624040CsGy3G025380Cucumber (Gy14) v2cgybcuB111
Csa3G624040Carg08917Silver-seed gourdcarcuB0796
Csa3G624040Carg05404Silver-seed gourdcarcuB0072
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G624040Wax gourdcuwgoB264
Csa3G624040Cucumber (Chinese Long) v2cucuB090
Csa3G624040Cucumber (Chinese Long) v2cucuB132
Csa3G624040Cucumber (Gy14) v1cgycuB075
Csa3G624040Cucumber (Gy14) v1cgycuB365
Csa3G624040Cucurbita maxima (Rimu)cmacuB251
Csa3G624040Cucurbita moschata (Rifu)cmocuB236
Csa3G624040Melon (DHL92) v3.5.1cumeB253
Csa3G624040Watermelon (Charleston Gray)cuwcgB188
Csa3G624040Watermelon (Charleston Gray)cuwcgB240
Csa3G624040Watermelon (97103) v1cuwmB253
Csa3G624040Watermelon (97103) v1cuwmB277
Csa3G624040Cucurbita pepo (Zucchini)cpecuB608
Csa3G624040Cucurbita pepo (Zucchini)cpecuB716
Csa3G624040Cucurbita pepo (Zucchini)cpecuB858
Csa3G624040Bottle gourd (USVL1VR-Ls)culsiB157
Csa3G624040Bottle gourd (USVL1VR-Ls)culsiB180
Csa3G624040Bottle gourd (USVL1VR-Ls)culsiB203
Csa3G624040Cucumber (Gy14) v2cgybcuB121
Csa3G624040Cucumber (Gy14) v2cgybcuB309
Csa3G624040Melon (DHL92) v3.6.1cumedB218
Csa3G624040Melon (DHL92) v3.6.1cumedB244
Csa3G624040Silver-seed gourdcarcuB0263
Csa3G624040Watermelon (97103) v2cuwmbB225
Csa3G624040Watermelon (97103) v2cuwmbB228