Carg08453 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGCCCCTCTCTGCCGAGCTGTATGAACACCCTCTTTCATTTCTTTGATTCCCATTCCTTTCCATCCACTCACTTAGCCCACAATAAGCACCAACCATCCTCTTTAGACCATGTTTGTTCTTCAGGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAGTAAATTTTACTTTTTGTTGCATTAATTTTCAAAGAACAATGTAATTTTCTAATCCTATGTTTTGAAATGCAGATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACTCCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTCCCGAACAGCCCGAGAGTATCCTCGTCGAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCGCTCGATATTAACTTGGACATAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACGTGACGATGTTTAGGAAGCATAACTCGATATCGACACTGACACCGACACCGACACCGAAACGGAAGCCAAGGGCAACGACTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGGTGCTATAATATATATATATATATATTATCAATTTTATAATATATCAGCTTTTTTCTCTTTATTGTTGTAACTCTTAAAATATATAAAAATAATATAATACAACTTTAATTTAAAAGCTAAGAAAAATAAATCTTGAAATTTTTAATTATAAAATATTTTTAAAAAATAGCTGCAAAATTGAAACATTATTTTATTATTATTATTATTTTTTTATTTTTTTTTTGGAAATTTATAAAAAAAAAATACGACAATTTAAAAATTTAAAAATTTAAAAATTTAAAAATTTAAAAAGCATTATTTTGAAGCGTATGAAAAATATGTTTGAAATTTCATAATTGTACGGGCTAAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAACGGCAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGCGAGTTGAAATACATAAAAAGAATATTAACTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGCTCGAGCGGTGGAACAAGGATGATGATGATGAAGTGTTGGGGGAAATGGTGATGAATTGTAGAACAAGGATGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTCCTGGAAGACATCGATTCCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGGTGTTGGAATTGGAAGGGGTTGTGAGGACCTTTCAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTATGTCCCTACATAAACGCTGTCGTTTTGTACCCCATGGATTTGTCCTCACGTGA ATGGCAAGACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGCCCCTCTCTGCCGAGCTGTATGAACACCCTCTTTCATTTCTTTGATTCCCATTCCTTTCCATCCACTCACTTAGCCCACAATAAGCACCAACCATCCTCTTTAGACCATGTTTGTTCTTCAGGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACTCCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTCCCGAACAGCCCGAGAGTATCCTCGTCGAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCGCTCGATATTAACTTGGACATAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACGTGACGATGTTTAGGAAGCATAACTCGATATCGACACTGACACCGACACCGACACCGAAACGGAAGCCAAGGGCAACGACTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAACGGCAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGCGAGTTGAAATACATAAAAAGAATATTAACTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGCTCGAGCGGTGGAACAAGGATGATGATGATGAAGTGTTGGGGGAAATGGTGATGAATTGTAGAACAAGGATGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTCCTGGAAGACATCGATTCCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGGTGTTGGAATTGGAAGGGGTTGTGAGGACCTTTCAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTATGTCCCTACATAAACGCTGTCGTTTTGTACCCCATGGATTTGTCCTCACGTGA ATGGCAAGACAATGGCTCTTTGGAGGAACCTCATCTCCCCGCCGAGCCCCCATCGACCGACACCGACACCGCCCCTCTCTGCCGAGCTGTATGAACACCCTCTTTCATTTCTTTGATTCCCATTCCTTTCCATCCACTCACTTAGCCCACAATAAGCACCAACCATCCTCTTTAGACCATGTTTGTTCTTCAGGTGTTGTAGCACCAAGGAACAGCTTGGAGCAATTGGGTCAAGAACAAAATGAGCAAATTCAAATGGGACTTGAAATCAACACAAATTTTGATCACAATGCATTGGATTCTCCAAGTGTCAAGACTCCAAATCTCTTGGCTAGACTAATGGGTCTTGATATTCTTCCTCAAACCACCACCTCCCCTTCCGCTACACGGTCTCTCCCGAACAGCCCGAGAGTATCCTCGTCGAGGCTATCGGATGTCGACCGTCATCACCATCGACACTCGCTCGATATTAACTTGGACATAGAGAATAGCCAAATTTGCAAAGAGATGAAACAAGAAGAAGAACAAGTGAGAAGGAAAGTTGCACTTGTTGACATTACCAATAATAACAACAAATTGGTGTATGGTAAACTAAAAAATCAAGACGTGACGATGTTTAGGAAGCATAACTCGATATCGACACTGACACCGACACCGACACCGAAACGGAAGCCAAGGGCAACGACTCGAGAAGAAAAAGAAGAAGAGTCTCCTCCTCCGGCGGCCAAAGTCCGTCATGAACAGTCATTCCCCAAACAGCGATGCCGGTTCCCGAACGGCAAGCAGAGGCCGGCAGCGGAAGAGGTGGGCAGGAGAGCCACCGCGGACGGCGGAGCAGGCGAGTTGAAATACATAAAAAGAATATTAACTTCTCCAAATTGGTTCTCCCCCACCAACCCATTGAACCCATCAATCTTCCACCACCTAGAAACCAGTAGCGCCGCCGTGGGAGAGCCAAGGCTCGAGCGGTGGAACAAGGATGATGATGATGAAGTGTTGGGGGAAATGGTGATGAATTGTAGAACAAGGATGATGATGATGAAGGGGTGGGAATTGGCACGTGCGAAATGTCATGTCCTGGAAGACATCGATTCCTTAATCGACAAAGATTTGGGGAAATGGAAGAAGGTGTTGGAATTGGAAGGGGTTGTGAGGACCTTTCAGTTTCATATTTTGGACTCCCTCTTGCGAGAAACTACTGCCACCATTATGTCCCTACATAAACGCTGTCGTTTTGTACCCCATGGATTTGTCCTCACGTGA MARQWLFGGTSSPRRAPIDRHRHRPSLPSCMNTLFHFFDSHSFPSTHLAHNKHQPSSLDHVCSSGVVAPRNSLEQLGQEQNEQIQMGLEINTNFDHNALDSPSVKTPNLLARLMGLDILPQTTTSPSATRSLPNSPRVSSSRLSDVDRHHHRHSLDINLDIENSQICKEMKQEEEQVRRKVALVDITNNNNKLVYGKLKNQDVTMFRKHNSISTLTPTPTPKRKPRATTREEKEEESPPPAAKVRHEQSFPKQRCRFPNGKQRPAAEEVGRRATADGGAGELKYIKRILTSPNWFSPTNPLNPSIFHHLETSSAAVGEPRLERWNKDDDDEVLGEMVMNCRTRMMMMKGWELARAKCHVLEDIDSLIDKDLGKWKKVLELEGVVRTFQFHILDSLLRETTATIMSLHKRCRFVPHGFVLT
BLAST of Carg08453 vs. NCBI nr
Match: XP_022958521.1 (uncharacterized protein LOC111459727 [Cucurbita moschata]) HSP 1 Score: 659.1 bits (1699), Expect = 1.0e-185 Identity = 372/422 (88.15%), Postives = 375/422 (88.86%), Query Frame = 0
BLAST of Carg08453 vs. NCBI nr
Match: XP_011656164.1 (PREDICTED: uncharacterized protein LOC105435648 [Cucumis sativus] >KGN50399.1 hypothetical protein Csa_5G172790 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 2.0e-40 Identity = 183/482 (37.97%), Postives = 238/482 (49.38%), Query Frame = 0
BLAST of Carg08453 vs. NCBI nr
Match: CBI24465.3 (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 94.7 bits (234), Expect = 7.7e-16 Identity = 150/578 (25.95%), Postives = 208/578 (35.99%), Query Frame = 0
BLAST of Carg08453 vs. NCBI nr
Match: PSR93382.1 (Serine/arginine repetitive matrix protein [Actinidia chinensis var. chinensis]) HSP 1 Score: 89.4 bits (220), Expect = 3.3e-14 Identity = 85/254 (33.46%), Postives = 109/254 (42.91%), Query Frame = 0
BLAST of Carg08453 vs. NCBI nr
Match: PSS33140.1 (Translation initiation factor IF-2 like [Actinidia chinensis var. chinensis]) HSP 1 Score: 87.8 bits (216), Expect = 9.5e-14 Identity = 78/243 (32.10%), Postives = 106/243 (43.62%), Query Frame = 0
BLAST of Carg08453 vs. TAIR10
Match: AT5G51850.1 (unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-09 Identity = 68/237 (28.69%), Postives = 93/237 (39.24%), Query Frame = 0
BLAST of Carg08453 vs. TAIR10
Match: AT4G25430.1 (unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08 Identity = 61/177 (34.46%), Postives = 85/177 (48.02%), Query Frame = 0
BLAST of Carg08453 vs. TAIR10
Match: AT5G62170.1 (unknown protein) HSP 1 Score: 44.3 bits (103), Expect = 2.2e-04 Identity = 57/207 (27.54%), Postives = 81/207 (39.13%), Query Frame = 0
BLAST of Carg08453 vs. TrEMBL
Match: tr|A0A0A0KNC2|A0A0A0KNC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172790 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40 Identity = 183/482 (37.97%), Postives = 238/482 (49.38%), Query Frame = 0
BLAST of Carg08453 vs. TrEMBL
Match: tr|A0A2N9FV46|A0A2N9FV46_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18927 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 5.7e-15 Identity = 85/253 (33.60%), Postives = 113/253 (44.66%), Query Frame = 0
BLAST of Carg08453 vs. TrEMBL
Match: tr|A0A2R6PM23|A0A2R6PM23_ACTCH (Serine/arginine repetitive matrix protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc27995 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-14 Identity = 85/254 (33.46%), Postives = 109/254 (42.91%), Query Frame = 0
BLAST of Carg08453 vs. TrEMBL
Match: tr|A0A2R6RSX3|A0A2R6RSX3_ACTCH (Translation initiation factor IF-2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03526 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.3e-14 Identity = 78/243 (32.10%), Postives = 106/243 (43.62%), Query Frame = 0
BLAST of Carg08453 vs. TrEMBL
Match: tr|A0A1S3AYQ5|A0A1S3AYQ5_CUCME (uncharacterized protein LOC103484030 OS=Cucumis melo OX=3656 GN=LOC103484030 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.4e-13 Identity = 80/222 (36.04%), Postives = 105/222 (47.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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