Cp4.1LG09g01040 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAGATAAAGAGAAAAAAGGGTTATGGTTTTTTTGGGTATCGGTGCAGTAAAACTTGGGAGTGAGTGTAGAACAGTAACCCAAGAGGGAGAAACTGTCTGCTTCTGCAACAATGGCGGATAGAAAGTCGAGGTAATTTCAGTGAAAAATAACTATCAACCTCAATTTTACAGAACAACAATCATCATACTCGTTGTTGGTGTACTTAAATTCCTGCATTCTAATCCTCCTGCCTTGTATAAATATGCTTCATTTCATCCGCTTTTCGAGAGCCATATAACAAACAATCTCTCTCTCTCTCTCTTTCCATTTCGTCATAATTGAAGCTCCAAACCCAGGGGTTTGCCCATTATGGGGAAGCAGAGGTCTTCCACCGCCGGACATGCCGGAAGAACTGCCAGAGCTAATAAGGATCCAAATGGTGTTCTTGATGATCATGAAGCTTCTTCTACTTCTGCTGGCTGTATGTGCGCTGTGTTTCATCTCTTTGATTTTCATCCTTTGAATCAACACCACCATCACCCTCCTCCTCCATCACACCCTGTTTCTCTCAACCCACTTGATCATCGTATTTCCACAGGTACTGAATTTTGAATCATGGGTTTTCTTTATTTTTATATTCTCTCTGTGATTCTGTAAAAAAAATCGGATTTTGAGTAATGGGTCTGTGAAAAATTCAGGTACTGAAGCTCCAAGAAACAGTTTGGAATCAGAGGAAGAATCTCCATTATCATGTACTCGAAAACAAAAACAGGATGCTCTGCATTTCCCAGTAAGTGATTTGATTGATGTTCTTGAGAAAAATCCATATTGAAATACGAAATTGTAAACGAATTGTAATGGAATTGCAGAAGGGTGTTCTTCAAATCAAAACCAAAGGATCACGAAATAATGAGGCGAAGGAGAAATTTTCCGGCGACTCTCCGAGCACCAAGACGCCGACTTTAGTGGCGAGATTAATGGGTTTGGATCTTCTTCCTCAATCAAACTCTCCTTCAACCACACCAAGAACAGCCTCTGCTTCTCCTCTTAATTACCCAATTCTTCATAAGCAGCAAAGAACAGCCTCTCGTTCCTTACCGGAAACCCCAAGAAGTTCCTGTGAAAGAAGATCAAATGTGGAAAATTATCACCCACGCCTTTCACTTCAAATCCCCAATTATGATAAAGAAAATGCAAGCCCAAGCCCAAGTCCAAGCCATTACGCTAAGGAAATTGTGAAGCAAATCAAAGAAAGTATGAGTAGAAAAGGTGGTCTCAATGATATCACCAACTATGCAAGAAGAGATCATGAAATGGTTAACCAAACAAAACCCAGAAAGGTATTATCTTGTTCTTCGGTATCTCCGAGACAGAGAGTAGTGGAGCCGAAGAATTTGAACAAACCGAAGCAAAAAGTGATATCAAAGGCGGCGTTGAAGAAGAGTAATAAGCAAGAGGAGCCATTTGTTGTCCCCTCGAGAATCACCAAGGCCGCCATTGACAGTCCTCTTAAGAAAACTCCATTGTCGGATAAGCTTTTGAGCTTTAGCTCTGTTCCGACCGTTGTCATCAAGAAAAACCCCCCATTTTCCTCACCCATTAAACCAACTCCAATGCAGGTAAATTTGGTTCATACAAAGTCATCCTGAAATGATCATGGATTTATAAGCAAGGGATTGTACTCATTGTTTCTTATGCTTAAACTGGAAGATATCATACGGTTGTGATGTTTATCTTGTTTTTTTTTATTTCTTACAGCCGCCGCCGTGCAATCGGGATCAAGCTGCAGGACAGACGGGCGATAAGGAATCAAAGCGATGCCTGCAGTCATCGAACCACCAATCCCACTTTCCAATTCATCATCATCACCAACACGTCATCCAATTACCACCCATTAATAATATCAACATCACAACCGCTTCCGCCGCCGCCAACCGCCGTAACCACCACGACATCACGGCAGAGGTGGAGTACATTAGACAAATTCTCCTCCGCCGTAGTACTACTTCCACATCAGTGTACTCCTCTGTTAATTTCCTTGAAAATGGCAACACCCATCATAATATTTCAATTACCCATAGAAAATTACTCTCCCACTTGGTGGAAGAGTTGCTGAAGCCGTACATCGAGCGTAGGCCGTATCGGCGGTCGGCGGCGGAGCGGTGGGCGGAGGTGGTGGAGAAAGTATGCGAGAAAGTTAGAAAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATAGATGGAATAATTGAAAAAGATATGGACATTTTGGGAATTGGATTTGAAGAAGAAGATGAAGGGATAGTGAAAGACATCGAGGAGTGGGTGGTGGAGGAGCTTTTGAACGAAACGGTGCGTTTTGTTTCGGAGGTTCGAGTCGGAGAGAGCGTTGTTGGTTTAGTTTAGGTGGTGGACAGAAATGGCAGAAGAATCACGTGGGAGATGCCACTTGGATGATCAGGACCCACATAGCTGGGGTTAAACTGCAGCGTAGGAGTTACACGTGGATTGTTGACCCGCCAGACAAGCACTGAGATTTTTCGGTTCTGAAAAATACAGTATTTATTACCAGAGTGTCCTCCTCTGTACAAATTTTATTTCTATCCCTAAATTTCCCTAAATTACAAAAAGAAACCCATTTCATTAATAGTGTAAATTAATATTTTAATTATCCAATTCGTATGGAGATTATTTAGTTTT AGAAAGATAAAGAGAAAAAAGGGTTATGGTTTTTTTGGGTATCGGTGCAGTAAAACTTGGGAGTGAGTGTAGAACAGTAACCCAAGAGGGAGAAACTGTCTGCTTCTGCAACAATGGCGGATAGAAAGTCGAGGTAATTTCAGTGAAAAATAACTATCAACCTCAATTTTACAGAACAACAATCATCATACTCGTTGTTGGTGTACTTAAATTCCTGCATTCTAATCCTCCTGCCTTGTATAAATATGCTTCATTTCATCCGCTTTTCGAGAGCCATATAACAAACAATCTCTCTCTCTCTCTCTTTCCATTTCGTCATAATTGAAGCTCCAAACCCAGGGGTTTGCCCATTATGGGGAAGCAGAGGTCTTCCACCGCCGGACATGCCGGAAGAACTGCCAGAGCTAATAAGGATCCAAATGGTGTTCTTGATGATCATGAAGCTTCTTCTACTTCTGCTGGCTGTATGTGCGCTGTGTTTCATCTCTTTGATTTTCATCCTTTGAATCAACACCACCATCACCCTCCTCCTCCATCACACCCTGTTTCTCTCAACCCACTTGATCATCGTATTTCCACAGGTACTGAAGCTCCAAGAAACAGTTTGGAATCAGAGGAAGAATCTCCATTATCATGTACTCGAAAACAAAAACAGGATGCTCTGCATTTCCCAAAGGGTGTTCTTCAAATCAAAACCAAAGGATCACGAAATAATGAGGCGAAGGAGAAATTTTCCGGCGACTCTCCGAGCACCAAGACGCCGACTTTAGTGGCGAGATTAATGGGTTTGGATCTTCTTCCTCAATCAAACTCTCCTTCAACCACACCAAGAACAGCCTCTGCTTCTCCTCTTAATTACCCAATTCTTCATAAGCAGCAAAGAACAGCCTCTCGTTCCTTACCGGAAACCCCAAGAAGTTCCTGTGAAAGAAGATCAAATGTGGAAAATTATCACCCACGCCTTTCACTTCAAATCCCCAATTATGATAAAGAAAATGCAAGCCCAAGCCCAAGTCCAAGCCATTACGCTAAGGAAATTGTGAAGCAAATCAAAGAAAGTATGAGTAGAAAAGGTGGTCTCAATGATATCACCAACTATGCAAGAAGAGATCATGAAATGGTTAACCAAACAAAACCCAGAAAGGTATTATCTTGTTCTTCGGTATCTCCGAGACAGAGAGTAGTGGAGCCGAAGAATTTGAACAAACCGAAGCAAAAAGTGATATCAAAGGCGGCGTTGAAGAAGAGTAATAAGCAAGAGGAGCCATTTGTTGTCCCCTCGAGAATCACCAAGGCCGCCATTGACAGTCCTCTTAAGAAAACTCCATTGTCGGATAAGCTTTTGAGCTTTAGCTCTGTTCCGACCGTTGTCATCAAGAAAAACCCCCCATTTTCCTCACCCATTAAACCAACTCCAATGCAGCCGCCGCCGTGCAATCGGGATCAAGCTGCAGGACAGACGGGCGATAAGGAATCAAAGCGATGCCTGCAGTCATCGAACCACCAATCCCACTTTCCAATTCATCATCATCACCAACACGTCATCCAATTACCACCCATTAATAATATCAACATCACAACCGCTTCCGCCGCCGCCAACCGCCGTAACCACCACGACATCACGGCAGAGGTGGAGTACATTAGACAAATTCTCCTCCGCCGTAGTACTACTTCCACATCAGTGTACTCCTCTGTTAATTTCCTTGAAAATGGCAACACCCATCATAATATTTCAATTACCCATAGAAAATTACTCTCCCACTTGGTGGAAGAGTTGCTGAAGCCGTACATCGAGCGTAGGCCGTATCGGCGGTCGGCGGCGGAGCGGTGGGCGGAGGTGGTGGAGAAAGTATGCGAGAAAGTTAGAAAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATAGATGGAATAATTGAAAAAGATATGGACATTTTGGGAATTGGATTTGAAGAAGAAGATGAAGGGATAGTGAAAGACATCGAGGAGTGGGTGGTGGAGGAGCTTTTGAACGAAACGGTGCGTTTTGTTTCGGAGGTTCGAGTCGGAGAGAGCGTTGTTGGTTTAGTTTAGGTGGTGGACAGAAATGGCAGAAGAATCACGTGGGAGATGCCACTTGGATGATCAGGACCCACATAGCTGGGGTTAAACTGCAGCGTAGGAGTTACACGTGGATTGTTGACCCGCCAGACAAGCACTGAGATTTTTCGGTTCTGAAAAATACAGTATTTATTACCAGAGTGTCCTCCTCTGTACAAATTTTATTTCTATCCCTAAATTTCCCTAAATTACAAAAAGAAACCCATTTCATTAATAGTGTAAATTAATATTTTAATTATCCAATTCGTATGGAGATTATTTAGTTTT ATGGGGAAGCAGAGGTCTTCCACCGCCGGACATGCCGGAAGAACTGCCAGAGCTAATAAGGATCCAAATGGTGTTCTTGATGATCATGAAGCTTCTTCTACTTCTGCTGGCTGTATGTGCGCTGTGTTTCATCTCTTTGATTTTCATCCTTTGAATCAACACCACCATCACCCTCCTCCTCCATCACACCCTGTTTCTCTCAACCCACTTGATCATCGTATTTCCACAGGTACTGAAGCTCCAAGAAACAGTTTGGAATCAGAGGAAGAATCTCCATTATCATGTACTCGAAAACAAAAACAGGATGCTCTGCATTTCCCAAAGGGTGTTCTTCAAATCAAAACCAAAGGATCACGAAATAATGAGGCGAAGGAGAAATTTTCCGGCGACTCTCCGAGCACCAAGACGCCGACTTTAGTGGCGAGATTAATGGGTTTGGATCTTCTTCCTCAATCAAACTCTCCTTCAACCACACCAAGAACAGCCTCTGCTTCTCCTCTTAATTACCCAATTCTTCATAAGCAGCAAAGAACAGCCTCTCGTTCCTTACCGGAAACCCCAAGAAGTTCCTGTGAAAGAAGATCAAATGTGGAAAATTATCACCCACGCCTTTCACTTCAAATCCCCAATTATGATAAAGAAAATGCAAGCCCAAGCCCAAGTCCAAGCCATTACGCTAAGGAAATTGTGAAGCAAATCAAAGAAAGTATGAGTAGAAAAGGTGGTCTCAATGATATCACCAACTATGCAAGAAGAGATCATGAAATGGTTAACCAAACAAAACCCAGAAAGGTATTATCTTGTTCTTCGGTATCTCCGAGACAGAGAGTAGTGGAGCCGAAGAATTTGAACAAACCGAAGCAAAAAGTGATATCAAAGGCGGCGTTGAAGAAGAGTAATAAGCAAGAGGAGCCATTTGTTGTCCCCTCGAGAATCACCAAGGCCGCCATTGACAGTCCTCTTAAGAAAACTCCATTGTCGGATAAGCTTTTGAGCTTTAGCTCTGTTCCGACCGTTGTCATCAAGAAAAACCCCCCATTTTCCTCACCCATTAAACCAACTCCAATGCAGCCGCCGCCGTGCAATCGGGATCAAGCTGCAGGACAGACGGGCGATAAGGAATCAAAGCGATGCCTGCAGTCATCGAACCACCAATCCCACTTTCCAATTCATCATCATCACCAACACGTCATCCAATTACCACCCATTAATAATATCAACATCACAACCGCTTCCGCCGCCGCCAACCGCCGTAACCACCACGACATCACGGCAGAGGTGGAGTACATTAGACAAATTCTCCTCCGCCGTAGTACTACTTCCACATCAGTGTACTCCTCTGTTAATTTCCTTGAAAATGGCAACACCCATCATAATATTTCAATTACCCATAGAAAATTACTCTCCCACTTGGTGGAAGAGTTGCTGAAGCCGTACATCGAGCGTAGGCCGTATCGGCGGTCGGCGGCGGAGCGGTGGGCGGAGGTGGTGGAGAAAGTATGCGAGAAAGTTAGAAAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATAGATGGAATAATTGAAAAAGATATGGACATTTTGGGAATTGGATTTGAAGAAGAAGATGAAGGGATAGTGAAAGACATCGAGGAGTGGGTGGTGGAGGAGCTTTTGAACGAAACGGTGCGTTTTGTTTCGGAGGTTCGAGTCGGAGAGAGCGTTGTTGGTTTAGTTTAG MGKQRSSTAGHAGRTARANKDPNGVLDDHEASSTSAGCMCAVFHLFDFHPLNQHHHHPPPPSHPVSLNPLDHRISTGTEAPRNSLESEEESPLSCTRKQKQDALHFPKGVLQIKTKGSRNNEAKEKFSGDSPSTKTPTLVARLMGLDLLPQSNSPSTTPRTASASPLNYPILHKQQRTASRSLPETPRSSCERRSNVENYHPRLSLQIPNYDKENASPSPSPSHYAKEIVKQIKESMSRKGGLNDITNYARRDHEMVNQTKPRKVLSCSSVSPRQRVVEPKNLNKPKQKVISKAALKKSNKQEEPFVVPSRITKAAIDSPLKKTPLSDKLLSFSSVPTVVIKKNPPFSSPIKPTPMQPPPCNRDQAAGQTGDKESKRCLQSSNHQSHFPIHHHHQHVIQLPPINNINITTASAAANRRNHHDITAEVEYIRQILLRRSTTSTSVYSSVNFLENGNTHHNISITHRKLLSHLVEELLKPYIERRPYRRSAAERWAEVVEKVCEKVRKFPRAKCEVLEDIDGIIEKDMDILGIGFEEEDEGIVKDIEEWVVEELLNETVRFVSEVRVGESVVGLV
BLAST of Cp4.1LG09g01040 vs. TrEMBL
Match: A0A0A0L5R3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G179150 PE=4 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 4.3e-145 Identity = 339/593 (57.17%), Postives = 400/593 (67.45%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TrEMBL
Match: B9R9J2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497860 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36 Identity = 144/368 (39.13%), Postives = 182/368 (49.46%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TrEMBL
Match: F6HAQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g02370 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 2.5e-36 Identity = 214/673 (31.80%), Postives = 289/673 (42.94%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TrEMBL
Match: I1L3G0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G148700 PE=4 SV=2) HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33 Identity = 153/473 (32.35%), Postives = 227/473 (47.99%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TrEMBL
Match: A0A0B2QSG6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038884 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33 Identity = 153/473 (32.35%), Postives = 227/473 (47.99%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TAIR10
Match: AT4G25430.1 (AT4G25430.1 unknown protein) HSP 1 Score: 91.3 bits (225), Expect = 2.1e-18 Identity = 82/235 (34.89%), Postives = 112/235 (47.66%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TAIR10
Match: AT5G51850.1 (AT5G51850.1 unknown protein) HSP 1 Score: 84.7 bits (208), Expect = 2.0e-16 Identity = 102/346 (29.48%), Postives = 151/346 (43.64%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. TAIR10
Match: AT5G62170.1 (AT5G62170.1 unknown protein) HSP 1 Score: 80.9 bits (198), Expect = 2.9e-15 Identity = 125/438 (28.54%), Postives = 193/438 (44.06%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. NCBI nr
Match: gi|778679428|ref|XP_011651128.1| (PREDICTED: probable serine/threonine-protein kinase dyrk2 [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 6.2e-145 Identity = 339/593 (57.17%), Postives = 400/593 (67.45%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. NCBI nr
Match: gi|659077328|ref|XP_008439147.1| (PREDICTED: probable serine/threonine-protein kinase dyrk2 [Cucumis melo]) HSP 1 Score: 518.8 bits (1335), Expect = 1.2e-143 Identity = 364/646 (56.35%), Postives = 426/646 (65.94%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. NCBI nr
Match: gi|255539605|ref|XP_002510867.1| (PREDICTED: uncharacterized protein LOC8258323 [Ricinus communis]) HSP 1 Score: 162.9 bits (411), Expect = 1.6e-36 Identity = 144/368 (39.13%), Postives = 182/368 (49.46%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. NCBI nr
Match: gi|950926633|ref|XP_014515174.1| (PREDICTED: uncharacterized protein LOC106772990 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34 Identity = 142/381 (37.27%), Postives = 182/381 (47.77%), Query Frame = 1
BLAST of Cp4.1LG09g01040 vs. NCBI nr
Match: gi|571477744|ref|XP_006587360.1| (PREDICTED: uncharacterized protein LOC100795947 isoform X1 [Glycine max]) HSP 1 Score: 152.1 bits (383), Expect = 2.9e-33 Identity = 153/473 (32.35%), Postives = 227/473 (47.99%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|