Lsi09G005650 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCCATCATGGTATATACTTTGAAAATTTTAATTTTAATTTTTTTTTAGAAATATTGTTTGGTCAATTTGATCCTCTATGAATGCTTGTTATGTATGCACGAGTAGATTAATTAGAATATGAATCCATGTGATATCCTAGATAAAGTTTTGATGATGTAATAATGGATGATATTAAAAAAAGCGTTATATTATTACTTAATATTTTTATGGTTAATTATGGGAAAATTTTCATATATAGAAAAAATGTTAAACTATTTAAAAAAAATAACAAAAAAAATGCTGATAGACATTGATAGACTTTTATTAGCATCTACCAATGATAGACTTCTATCATTTCTATCACTAATAGACCTTGATAGACTTCTATCAGCGTCTATCACAACTATCTAAACATTTTGTTATTTTATGTAAATAAACTTCCTTATTTTTCTATTTTAAAAAAATTCTCCATATATATATAGGGCTGTTTTCAAATATAGAAAAATGAACCAAACTATTTACAAATATAGAAAAATTTTACTATCTATCAGCGATAGACTGCGATACAATTTTATCGCTCAAGCAATAGAATTCTATTGTGATATATTGTTGATAGACAATGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTTTCTATTTATAATAATTTTCATATATAAAGAGGTCATTTTCATACTATAAAGAAAAAAAAAAAAAAAAAAAAAGAGAGATGTGACCATTTTTATTTATTTAATTTTAAATTTACTTTTATATTTTCTTTGGGAAATTCTCATAAACTTTTGGTACCATCTTTTTTGTACTTCAGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAGTAAACTTTTCCTCTCTCCTCTTTCATATTCAAATGATAGTGTAATTATGTTCAAGCAATCATTTCTTTAATTTTTATATAAGATTTTTAAATTTTACTAAAATATAATATATATATATATATATATATATATATATATATCTTAAAACAGATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTTGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATTGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAACAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGGTACTACACATTACTTTTCATGTCCTTTCAATTTACTTTAGAAGAAATTTTAGGATATTTATATAAATAATTATTAAAATAATTATTAAAAATAACTTTCGTTTACTTTTTTACATGTGACTTATTTTTAATTGACCATAAAATATTGTTGAAATAAAGTTGTATGAAACTAGATAATGTAAATAATTAAATATGTATAAACTATACACAGTCATGTGAGTCAATTCGAAAAATGGACCTCTTCCAAGAGAGAACACAAATAAGAAATTCAATAGTATAATAAATTAAATATTATATATTTAAATATATCATCACTTTTATTATTCTCATATTTCTCCTTAAAAAAATAACTTAACCTTCTTCAAAGGTGTTGTTGTTGTTATTTTTATTTTTATTATTATTATTATTATTATTATTATTAAAGTTTAAAAATAAAAAAATTATAATAAACAGAAATTCTAGGTAGGTGACTATCATAAATTGAACTCATAACTCCTTAGCCCTTTGACCTTCTTTGATGTTTTTACTGTCACTAGACTAACTCATGATAGTTAATATAGATAAATTGTTACAACACTAATTTTAAAAAGGCCATATATTTAAATATTTATAAATGAATTTCAACTACCATAAAATTGTAGTTTTTTTTAATACTTTTTTAAAACTATGGGGTTGTGGGTTCGCGCCCAGATACTCACGCATATCATAATAAAAAAAAACTTTTTAAAATAAATTTTATTATTATTTTTCTTTCTAACTCCTTAAAATCAATTTTGAAATATATAGACCGATTTTGAAAACTACCCTTCTAATTTTTCTTTTAAAAACATTTATGGATAAACTTTTAACATGTTTCCATGGATTATAAAATTAACTATTGAGTTCTTCAAAAAATTAAAATAATATAAAATAAAATAGATTATTGCTGGTAAACAATTGTTTTCTTTATTGAAGACCAAAAGATAATTATGAAACTGAGTGTTTCAGTTTTTTTTTAAAATAATAATAACAGTAGTAATTTCTATTTGAAAGATCACAAAAATAAATCTTGAAAATTCTAACCATAAAATATTATTAAAAAATAAACTGCAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAGACAAAAGTACTGATATAAAAATTTGAAACATTGTTTTAATTTATAAAATTTCAGTGTATTTCTTTAGAGTGAGCAGGTCATGTAAGATTTTTGTGCAGAAGAATAAATTGATTATTTAAGTTGGTCAAGAGGTTCAAATTTTTCTTGTGAAAAATAGGTGAATAACTTTATTGAAGAATTAAATGCAACATTTTGTTTTTCTTCACAAAATTGGTTTTTAAGAAGGAAAAAATAAACTTTAAGCCTAAAAGTTATTTCTCATTGGTATTTTTTTGTTTTTGAATAATTGGTTTACCTTAAAAAAAATGGTTTTAAAGGACAAATTTGAAAAATATTTTCAAATATAACAAAATAGTATATTTTCATATGAAGAAACTTTTTACTATTTTACCATATTTATAAATAAGTGGGCCATTTTGCAAAATTTATTTTTAAGCCTATAAGTCTTTCCTTTCCCTTATAGCATATATTACAAAAAAAATTTCAATTTTTTTCCAAGAAAAAAAAGGTGTCTTAAGCCTTTTTATGAAGGTTTTCTCTCTCCTTAATTTGGCTTGGCTATAGTGTCATAAAAAGTCATATTTGTTGTAGTTCTACAACTCTTTAGTTGAAGATTAACGTCACTAAATATTAGAACTCATCATATTATTTTTAAATAATATCTCGGTAACATTATTTATAAATGTAAGCTCATCAAATTAACTATAAAGATCTATTATTAGATATAAAATTAAAAGGTAAAAAATCTATAAAAGATATTTTTAAAATATAAAGGATCGATTAAAAAATTTAGAACTTGGGGCTTCAACTTAACTCTAAAAACTAGATGAGTATTTAAATAGGAAAAAAAAAGGCCCATTTGAAATTTCATAACCATTTAGTTTTTATTTTCTTACGATTTCTTTATCATGATTTTTACTTTTCTTTTAACTACACAACATTTTTATTTATTTATTTAGATTTTTATAACTCTCAATTTTTAAAATCCAAAAACTAAAATTTGAACTCATTTTGGAAACCACTTGGTTTTCTAAAAAAATTGGGCTTGTTTTCTCATAATTTTTTTTAATGGTTTCATATTTTGACACATTAGAATTCTTAGCCAATTTCCAAAAACAAAAGTAAATTTTTGAAAACTAATTTTTTTTACTTTTTAAAATTTGGCTTTGATTTTGAAAATACTCAAAAAATGTAGACAACATAACATAAAAAACAATACATGGAGGTGGTGTTTATAGATTTAATTTTAAAACAAATTAAAAATTAAGTCTCCGTTTAGTAACTATTTGATTTTTTAAAATAAAGCCTATAAACAATCCACTTCTAAATTTCTTGCTTTCTTTACTACTTTCAACCAATATTTTTAAAATATAAGCCAAGTTTTAAAAAATATATATATAAGTTGCTTTTAAAAAAGGAAAATTTTCACCGATAGAAAAAATGTCAAACTATTTACAAAAAAATAACAAAAGAAAAAAAAAATACTAATATACATTGATAGACTTCGATCAACGTCTATCACAACTATCTAAAAATTTTGTTATTTTGTATAAATAGTTTTTCTTATTTTTCTATTTTTAAAAATTTCTCTTTTTAAAAACTTATTTTTGTTTTTGAAACGTGGGAATAAGCTTAATTTTTTAAAAAATCAAAAACCATCTACCAACATCACAAATTGTTTCCAAAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCCATCATGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTTGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATTGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAACAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA ATGGGAAAATTAGAATGGCACTTTGGAGGAAGATCATTTTCACGTCGAGCCACCGTCGATCACTCCCGACGACACCGCCGCCCTTCTCTTCCGAGCTGTATGACCACCCTCTTTCACTTTTTTGATTTTCGTTCCTCTCGTTTTACTTGCATTGTCTTCGACAATCGCTATCCGTCCTCCTTCGACCTCTCGCCTCATCCTCCTTCTCTACCCAAAGCTTCCCATCATGGTGTTGAAGCACCAAGGAACAGCTTGGAATTAGATGGAGCTTCAATTCCTTGCTTAAGAATTAAAGAAGAAAATTTGCAACTTCAAATGGGACTTCAAATCAAAACTAGAAATGGTTGCACAAAACCAAAAGCAAGTGAGCAACAACTTCCAAATAATGATCACATTATTGCATTAGAATCTCCAAGTGCAAAGAGACCAAATCTCTTGGCAAGATTAATGGGTCTTGATATTCTCCCTCAAACCTCCTCTTCTTCTTCCAATTCTCACGGACCAAATTACGGAACCCGTTCTCTCCCAGAGAGCCCGAGAATATCGTCAGCAAGATTATCAGACGTCGACTATCATCATCGTCGTCTCTCACTCCAAATTATTCCTGAAAAAGAGAATATCGAAATTTGTACTGAAGAGATTAAGCAAGAAAAAGAAAAAGTGAGAAGGAAAGTTGCACTCGTTGATATCACTAATAATAACAAGAAAACAGAATTTGGAAAACAAGAAGTTGGTATTAGTCAAAGTAAAGTCGAGATCAAGTCTAATAAGAAACTTAAGAAGATGGTAGCTGATGAATCAAGTTGTTCAAAAATCGTGCTTAGAAATCGAGAGGTTATGATTTCCAAGAAGCAAAAGCTAATATTGATGTCGATGCAAAAACGGAAGCCAAGGGCTCGAGAAGGTGAAACATTTGATTGTCCAACAAACAATAACCTTCTTAACAACGTCAATCATTCAACTATTTTTCCAGTAAAGAAAGAGCCTTCTCCTCCGGCGACCAAGGTCCCTCGTGAACAGCCGTGTAGGTACTCAAAGGGCAAGGCGAAGCCGGCGGGCAGAGACGGCGGAGAAAGAAACGCCTTGAACCTTACCACCACCACAGACGGCGGATCAGCCGAGTTCAAATACATCAAAAGAATACTAACCAATCACCGCAATTCAAACTTGATCATCTCACCCTCTAATAACCCAATGAACCCCTCAATCTTCCACCACCTAGAAACCGCGGCCGCCGCCGCCGTGGAGGACCAGCAATGGAACAAACGACTACTGAACTGTTGGCACGTGCGAAGAGGAATGAAGAGATGGGAATTGGGTGAGGAAGTGAGGGAGAGAGTGAAGAAAGAGTACTTCCCACGTGTGAAATATGAAGTAGTGGAAAATATGGATACCTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACATTTTGGATTCCCTTTTACGAGAAACTATTGCTCTAATTTCTTCCCTACCAAAATGTTCTCATTTTCATAATTTCTAA MGKLEWHFGGRSFSRRATVDHSRRHRRPSLPSCMTTLFHFFDFRSSRFTCIVFDNRYPSSFDLSPHPPSLPKASHHGVEAPRNSLELDGASIPCLRIKEENLQLQMGLQIKTRNGCTKPKASEQQLPNNDHIIALESPSAKRPNLLARLMGLDILPQTSSSSSNSHGPNYGTRSLPESPRISSARLSDVDYHHRRLSLQIIPEKENIEICTEEIKQEKEKVRRKVALVDITNNNKKTEFGKQEVGISQSKVEIKSNKKLKKMVADESSCSKIVLRNREVMISKKQKLILMSMQKRKPRAREGETFDCPTNNNLLNNVNHSTIFPVKKEPSPPATKVPREQPCRYSKGKAKPAGRDGGERNALNLTTTTDGGSAEFKYIKRILTNHRNSNLIISPSNNPMNPSIFHHLETAAAAAVEDQQWNKRLLNCWHVRRGMKRWELGEEVRERVKKEYFPRVKYEVVENMDTLIINKRMAEEIEGIVKVVELHILDSLLRETIALISSLPKCSHFHNF
BLAST of Lsi09G005650 vs. TrEMBL
Match: A0A0A0KNC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G172790 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 7.1e-123 Identity = 313/543 (57.64%), Postives = 363/543 (66.85%), Query Frame = 1
BLAST of Lsi09G005650 vs. TrEMBL
Match: B9R9J2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1497860 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.7e-21 Identity = 117/325 (36.00%), Postives = 152/325 (46.77%), Query Frame = 1
BLAST of Lsi09G005650 vs. TrEMBL
Match: A0A0B2Q305_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_012482 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 5.0e-20 Identity = 136/415 (32.77%), Postives = 181/415 (43.61%), Query Frame = 1
BLAST of Lsi09G005650 vs. TrEMBL
Match: A0A061FZR8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015048 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 8.6e-20 Identity = 137/425 (32.24%), Postives = 185/425 (43.53%), Query Frame = 1
BLAST of Lsi09G005650 vs. TrEMBL
Match: I1NGN8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G154100 PE=4 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 8.6e-20 Identity = 136/415 (32.77%), Postives = 180/415 (43.37%), Query Frame = 1
BLAST of Lsi09G005650 vs. TAIR10
Match: AT5G62170.1 (AT5G62170.1 unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 3.1e-13 Identity = 113/406 (27.83%), Postives = 174/406 (42.86%), Query Frame = 1
BLAST of Lsi09G005650 vs. TAIR10
Match: AT5G51850.1 (AT5G51850.1 unknown protein) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-12 Identity = 110/407 (27.03%), Postives = 185/407 (45.45%), Query Frame = 1
BLAST of Lsi09G005650 vs. TAIR10
Match: AT4G25430.1 (AT4G25430.1 unknown protein) HSP 1 Score: 63.5 bits (153), Expect = 4.2e-10 Identity = 108/444 (24.32%), Postives = 176/444 (39.64%), Query Frame = 1
BLAST of Lsi09G005650 vs. NCBI nr
Match: gi|659074617|ref|XP_008437700.1| (PREDICTED: uncharacterized protein LOC103483045 [Cucumis melo]) HSP 1 Score: 455.7 bits (1171), Expect = 1.1e-124 Identity = 303/517 (58.61%), Postives = 351/517 (67.89%), Query Frame = 1
BLAST of Lsi09G005650 vs. NCBI nr
Match: gi|778708318|ref|XP_011656164.1| (PREDICTED: uncharacterized protein LOC105435648 [Cucumis sativus]) HSP 1 Score: 449.1 bits (1154), Expect = 1.0e-122 Identity = 313/543 (57.64%), Postives = 363/543 (66.85%), Query Frame = 1
BLAST of Lsi09G005650 vs. NCBI nr
Match: gi|1009122486|ref|XP_015878027.1| (PREDICTED: uncharacterized protein LOC107414431 [Ziziphus jujuba]) HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26 Identity = 125/332 (37.65%), Postives = 164/332 (49.40%), Query Frame = 1
BLAST of Lsi09G005650 vs. NCBI nr
Match: gi|255539605|ref|XP_002510867.1| (PREDICTED: uncharacterized protein LOC8258323 [Ricinus communis]) HSP 1 Score: 111.7 bits (278), Expect = 3.8e-21 Identity = 117/325 (36.00%), Postives = 152/325 (46.77%), Query Frame = 1
BLAST of Lsi09G005650 vs. NCBI nr
Match: gi|734361716|gb|KHN15690.1| (hypothetical protein glysoja_012482 [Glycine soja]) HSP 1 Score: 107.5 bits (267), Expect = 7.2e-20 Identity = 136/415 (32.77%), Postives = 181/415 (43.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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