Carg08009 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08009
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein jagunal
Location	Cucurbita_argyrosperma_scaffold_050 : 169358 .. 171788 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGTAAGTTTCCTCACTTTTTTCTCCTAATTTTCATTTGGCTGTTGAGCAACCATGTGATGTATAGAATAAAAAGTTGATCGATATGGAGAAGAAAAACTTCGTTGTTCGTCTTTTTTTGGTCCTCATTGATGTCCTATTTCTGCTCAGCTCTTCGGCTTAGTGGAAGAGGATAGTTTGCTCTAGTTTTTCAGTCATTGCAACACGAAATTGGATTTGTTTGGCTATTTTATTTGTCTTATTGGAATCAACTTCGGTTCTTATGACGCGTTACTCTAATTATAGGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTACACGCATTATATTGCTTTTACAGAAAATTTTGTTCACATCTTCTAGCGTGTTTTGCTTCATTGTTGTTTATGAACGAAAAAAAATAAAAAATGCAATATCTTCTAATTGATCTCTCGATGCTTTTACTTTTGCTTCTTGCCTTTGTTATCACGAAATCCTCCAAACTTTGCTTTAATTTATGGCAAACAGTAGAAAAGTAGATCTATTAGTGAGTTTTATGTTCGTATTTGAGGGAAAAACTCTTTAAAGCCCATAAAAATTGGGCGACATTTTCCATCAGGTATTAGTCTGATAAAGCATTTCTTTATGTGAATGACTTCTACCAGGACATCCAGATCAGTGATTTCCTAGTTCTTGTGATGTGAGTTTAATGTAGAGCTGACCTTAGGAGAGATTTATTGATTCCTGATGTTGTTTACCTTAGTATCATGAAGGCCTATAATTTGTGATCAATAAATTTTCATGTAATAGTTGGTTCAATCTTTTCTTCTACTTCTCTCAACTCTGATGTGACCGACTGGAATTTCTTTCTTGTTTACTAATTTTCCTAGTTCCTCTATTGAAATTTGTAAATGCTAAAGATTTTAGAGGGAGACCCTGATAAACTTGCTATTTCATGGGAGCCGTTGCTTATCTCTGGACCTCTCATGACTGTTTGTTGTTTTACCCTAATTGGGTCTGTTGGATTATACTGCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTTGCTAATTATATTATTACTTCTTTTTTTAGCTAACTTACACATCTTTGTCTGTTTCAACTGTAATGATTGACTTTTTTGCCAATGTTCTATTGAAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGTAAGGAAAACTGATTCATTCTCTAATTTGATGCTCTAAATAAGAGAGAAATCAAATGAAAATGTTATGGAATTGTTATTTATGCTGACTAGTCGAAGAAGTAATAGCAATGAGACCGGGGAATTGAATTCGATGAAAATTAAAGTAGGCTTTATATAAGTGTAGTTGTCGAGACTCCAAAGATTCATCGTTTCTTTGTCACCATTGGCATCTATACATGAAAATGGTTGGGAGCTTCAATTTGATTGGTTGATTATATTTATAACTCTTCGGGCTTTGATCATTAACTTCCGTGGGGTGATGTCTGTTCCGAATGCTTTATTCTCCATTCTGACTGAACTTTGAATCTCATGAACCATTTAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGTGGGTTGTTTATTACATGCTATCTTCATTGATTTTCAGAGTCAATAAGTATGAACTAACGCAGGAATTGTGATATGCCTCCATACAGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAGTCTCTTTATTGTTACTTTTCGATTCTGAATCCAAAAATAGTTCAAAAGTAAGTTTGGATTTCTCTTTTCTCGATAATTATGTAAGAAAGGCTCCACTTAGGTTGGATCCTACAGCGATTTTGATGAAATTGTAGGTTAAAATTGACTTTTGAGTACTTTTTTTTTTTT

mRNA sequence

ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAAGTTATTCTGTACCAAACTGTTGTCCTTTAACGACCAGAAAGTCTCTTTATTGTTACTTTTCGATTCTGAATCCAAAAATAGTTCAAAAGTAAGTTTGGATTTCTCTTTTCTCGATAATTATGTAAGAAAGGCTCCACTTAGGTTGGATCCTACAGCGATTTTGATGAAATTGTAGGTTAAAATTGACTTTTGAGTACTTTTTTTTTTTT

Coding sequence (CDS)

ATGTGCCGGTTTCCGGTTTATATTATTCTAAACCGAGGTTTGATTGGGCCAGATCCGAACCAAACCAAACCTCGTGCACACCCCGCTAAAAAGGTCCGGAAAGAAGGAAAGCGTCTGTCGTGGGTGGAAGTCGAAGGTCCGAATTTTCGGAGTCCAGTGCCCACGAAGAAGATGAATCAAAGGAAATCGGCTGCTGGAAGGCCGTCTGGAACCGATGGTTCTGATTTCGCCTATCGCATGGTTGTCGATTCTCGGTATCAAAAGGTTGCCAAAGGAAAATCTCGTTTATCTACGCTGATTTTAAATCAGGTTATCATTCAGTTATGTGGAATGGTCTACTTGTTTATATTGACATCAAAGAGGGAGACTCCAGATAAACTTGCAATTTCATCTGCTGTCATTGGTTTCCTTTCGTTGTTCATAGGAGAACTAGGTCGTAGGCGTAGCCGTGCAAGTTTCATGAAAGCTTATATGATTGCATCATCTCTTGCGCTCCTACTACTTTTTGTTAATGTCTCTCAGGGAAATTATACGTTTGAGGGAATTGAGGATCTGAGTAATTGGCAGACAAAGAAGCTCGAACTTTTGGAGACGATCCGCATTTTTCTTGGAGCCCTGCTTCAGATATTTGCAATCAGGACAGTGATTTCCCTCGTTGGTAACATGTCTCTTCCAAAACGCTCTTCTTAA

Protein sequence

MCRFPVYIILNRGLIGPDPNQTKPRAHPAKKVRKEGKRLSWVEVEGPNFRSPVPTKKMNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFILTSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNYTFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS

Homology

[Close]

BLAST of Carg08009 vs. NCBI nr
Match: XP_023551542.1 (uncharacterized protein LOC111809297 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.2 bits (809), Expect = 8.9e-83
Identity = 167/172 (97.09%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQV+IQLCG+VYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVVIQLCGVVYLFIL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSKRETPDKLAISSAVIGF SLFIGELGRRRSRASF+KAYMIASSLALLLLFVNVSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMS PKRSS
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Carg08009 vs. NCBI nr
Match: XP_022943094.1 (uncharacterized protein LOC111447929 [Cucurbita moschata])

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRL TLILNQVIIQLCG+VYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVIIQLCGVVYLFIL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSKRETPDKLAISSAVIGF SLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY
Sbjct: 61  TSKRETPDKLAISSAVIGFFSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMS PKRSS
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Carg08009 vs. NCBI nr
Match: XP_022989151.1 (uncharacterized protein LOC111486305 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 9.9e-82
Identity = 165/172 (95.93%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRL TLILNQV+IQLCG+VYLFIL
Sbjct: 1   MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLYTLILNQVVIQLCGIVYLFIL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSKRETPDKLAISSAV GFLSLF+GELGRRRSRASF+KAYMIASSLALLLLFVNVSQGNY
Sbjct: 61  TSKRETPDKLAISSAVTGFLSLFLGELGRRRSRASFLKAYMIASSLALLLLFVNVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMS PKRSS
Sbjct: 121 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSPPKRSS 172

[Close]

BLAST of Carg08009 vs. NCBI nr
Match: XP_008439098.1 (PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 4.3e-69
Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR  TLIL Q++IQLCG+ YLFIL
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSK+ETPDKLAISSA+ GF SLFIGELG+R SR SF+K Y+IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFE I DLSNWQTK+LEL E IRI LGALLQIFAI TVISLVGNMS PKR+S
Sbjct: 121 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 172

[Close]

BLAST of Carg08009 vs. NCBI nr
Match: XP_022140868.1 (uncharacterized protein LOC111011431 [Momordica charantia])

HSP 1 Score: 270.4 bits (690), Expect = 5.6e-69
Identity = 145/174 (83.33%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 58  MNQRKSAA--GRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLF 117
           MNQRKSAA  GRPSGTDG DF+YRMVVDSRYQKVAKGKSRL +LI  QVIIQLCG VYLF
Sbjct: 1   MNQRKSAAGTGRPSGTDGYDFSYRMVVDSRYQKVAKGKSRLYSLISAQVIIQLCGAVYLF 60

Query: 118 ILTSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQG 177
           ILTSKRET DKLAISSA+ GF SL +GELGRR SRASF+K YMIASS+ALLLLF NVSQG
Sbjct: 61  ILTSKRETLDKLAISSAITGFFSLLVGELGRRHSRASFLKIYMIASSIALLLLFANVSQG 120

Query: 178 NYTFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           NYTFEGI DLSNWQ KKLEL ETIRIFLG+LLQIFA+ TVISL+GNMS PKR+S
Sbjct: 121 NYTFEGIGDLSNWQRKKLELFETIRIFLGSLLQIFAMSTVISLIGNMSPPKRTS 174

[Close]

BLAST of Carg08009 vs. TAIR10
Match: AT5G51510.1 (unknown protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32
Identity = 82/172 (47.67%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M QRK  AGRPSGTDGSDF+YRMVVDSRY KV K K+RL  LI  Q  I + G+   F+ 
Sbjct: 1   MQQRKPTAGRPSGTDGSDFSYRMVVDSRYTKVTKEKARLRPLIFVQAAIYVIGLSCAFLT 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           T+K++  + LAI++AV G +   IGELG RRSR + ++ Y  AS++ ++L      +   
Sbjct: 61  TTKKDEKNTLAIAAAVAGLVCSLIGELGCRRSRVNLLRLYTAASTIVMVLSVFCAVRSRL 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           T E  E  S+  T KLEL   I   LGA++QI AI    SLV NMS P +++
Sbjct: 121 TME--ERNSSGTTAKLELAGFICAQLGAVVQILAIIVTGSLVNNMSPPTKAA 170

[Close]

BLAST of Carg08009 vs. TrEMBL
Match: tr|A0A1S3AXI9|A0A1S3AXI9_CUCME (uncharacterized protein LOC103483988 OS=Cucumis melo OX=3656 GN=LOC103483988 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.8e-69
Identity = 141/172 (81.98%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR  TLIL Q++IQLCG+ YLFIL
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHTLILAQIVIQLCGVAYLFIL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSK+ETPDKLAISSA+ GF SLFIGELG+R SR SF+K Y+IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYVIASSLSLLLLLVDVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFE I DLSNWQTK+LEL E IRI LGALLQIFAI TVISLVGNMS PKR+S
Sbjct: 121 TFESIGDLSNWQTKQLELFEMIRISLGALLQIFAISTVISLVGNMSPPKRAS 172

[Close]

BLAST of Carg08009 vs. TrEMBL
Match: tr|A0A0A0L667|A0A0A0L667_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175730 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.5e-67
Identity = 138/172 (80.23%), Postives = 152/172 (88.37%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M+QRKSAAGRPSGTDGSDF+YRMVVDSRYQKVAKGKSR  +LIL QV+IQLCG+ YLF+L
Sbjct: 1   MSQRKSAAGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRFHSLILAQVVIQLCGVAYLFLL 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           TSK+ETPDKLAISSA+ GF SLFIGELG+R SR SF+K Y IASSL+LLLL V+VSQGNY
Sbjct: 61  TSKKETPDKLAISSAITGFFSLFIGELGQRHSRTSFLKVYAIASSLSLLLLLVDVSQGNY 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           TFE I DLSNWQ K+LEL E IRI LGALLQIFAI TVISLV NMS PKR+S
Sbjct: 121 TFESIGDLSNWQAKQLELFEMIRISLGALLQIFAISTVISLVSNMSPPKRAS 172

[Close]

BLAST of Carg08009 vs. TrEMBL
Match: tr|A0A2P4KZW4|A0A2P4KZW4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_46456 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.9e-49
Identity = 110/172 (63.95%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M QRKSA GRPSGTDGSDF+YRMVVDSRYQKVAKGKSRL  LI  Q +I   G VY F L
Sbjct: 1   MQQRKSAFGRPSGTDGSDFSYRMVVDSRYQKVAKGKSRLYALIFIQAVIHSIGAVYTF-L 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
           T+ +E PD+LAIS+ VIGFLS  IGELGRRRSR SF+K Y++ S+ A LL    V++ N+
Sbjct: 61  TTLKEGPDRLAISTIVIGFLSFIIGELGRRRSRVSFLKVYIVGSTAATLLWIAYVAKSNF 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
             E I+D SNW+  K ELLET RI +G L+QIF I T ISL+ NMS PKR+S
Sbjct: 121 ALEVIQDPSNWEKYKFELLETARILIGLLIQIFTIGTTISLISNMSPPKRAS 171

[Close]

BLAST of Carg08009 vs. TrEMBL
Match: tr|A0A2P5C5H1|A0A2P5C5H1_PARAD (Protein jagunal OS=Parasponia andersonii OX=3476 GN=PanWU01x14_182600 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.6e-48
Identity = 101/172 (58.72%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M QRK A+GRPSGTDG D+ +RM+V+SRYQ+VA+GKSRLS LI  Q IIQ+ G++Y+ + 
Sbjct: 1   MQQRKPASGRPSGTDGHDYRFRMIVESRYQRVAQGKSRLSALIFAQAIIQIIGVLYIVLW 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
            S +E PD++AISS V+G++SL +GELGRRRSRA+ +K YM+ SSLA+ L  + V++GN 
Sbjct: 61  ASWQEGPDRIAISSIVVGWISLILGELGRRRSRANLLKLYMVGSSLAIFLSIICVAKGNL 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           T E I+D  NW+  K ELLET R+ LG L+QIF I TVISLV +MS PK++S
Sbjct: 121 TLEVIQDPRNWEANKFELLETSRVLLGFLIQIFTISTVISLVRDMSPPKKAS 172

[Close]

BLAST of Carg08009 vs. TrEMBL
Match: tr|A0A2P5EVC0|A0A2P5EVC0_9ROSA (Protein jagunal OS=Trema orientalis OX=63057 GN=TorRG33x02_148180 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.7e-48
Identity = 101/172 (58.72%), Postives = 132/172 (76.74%), Query Frame = 0


Query: 58  MNQRKSAAGRPSGTDGSDFAYRMVVDSRYQKVAKGKSRLSTLILNQVIIQLCGMVYLFIL 117
           M QRK A+GRPSGTDG D+ +RM+V+SRYQ+VA+GKSRLS LI  Q IIQ+ G++Y  + 
Sbjct: 1   MQQRKPASGRPSGTDGHDYRFRMIVESRYQRVAQGKSRLSALIFAQAIIQIIGVLYTVLW 60

Query: 118 TSKRETPDKLAISSAVIGFLSLFIGELGRRRSRASFMKAYMIASSLALLLLFVNVSQGNY 177
            S  E PD++AISS V+G +SL +GELGRRRSRA+ +K YM+ SSLA+ L  + V++GN 
Sbjct: 61  ASWEEGPDRIAISSIVVGLISLILGELGRRRSRANLLKLYMVGSSLAIFLSIICVAKGNL 120

Query: 178 TFEGIEDLSNWQTKKLELLETIRIFLGALLQIFAIRTVISLVGNMSLPKRSS 230
           T E I+D SNW+  K ELLET R+ LG L+QIF I TVISL+ +MS PK++S
Sbjct: 121 TLEVIQDPSNWEANKFELLETSRVLLGFLIQIFTISTVISLIRDMSPPKKAS 172

The following BLAST results are available for this feature:

BLAST of Carg08009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551542.1	8.9e-83	97.09	uncharacterized protein LOC111809297 [Cucurbita pepo subsp. pepo]	[more]
XP_022943094.1	1.5e-82	97.67	uncharacterized protein LOC111447929 [Cucurbita moschata]	[more]
XP_022989151.1	9.9e-82	95.93	uncharacterized protein LOC111486305 [Cucurbita maxima]	[more]
XP_008439098.1	4.3e-69	81.98	PREDICTED: uncharacterized protein LOC103483988 [Cucumis melo]	[more]
XP_022140868.1	5.6e-69	83.33	uncharacterized protein LOC111011431 [Momordica charantia]	[more]

BLAST of Carg08009 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51510.1	6.7e-32	47.67	unknown protein	[more]

BLAST of Carg08009 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08009 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXI9\|A0A1S3AXI9_CUCME	2.8e-69	81.98	uncharacterized protein LOC103483988 OS=Cucumis melo OX=3656 GN=LOC103483988 PE=...	[more]
tr\|A0A0A0L667\|A0A0A0L667_CUCSA	3.5e-67	80.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175730 PE=4 SV=1	[more]
tr\|A0A2P4KZW4\|A0A2P4KZW4_QUESU	1.9e-49	63.95	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_46456 PE=4 SV=1	[more]
tr\|A0A2P5C5H1\|A0A2P5C5H1_PARAD	3.6e-48	58.72	Protein jagunal OS=Parasponia andersonii OX=3476 GN=PanWU01x14_182600 PE=4 SV=1	[more]
tr\|A0A2P5EVC0\|A0A2P5EVC0_9ROSA	4.7e-48	58.72	Protein jagunal OS=Trema orientalis OX=63057 GN=TorRG33x02_148180 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007029	endoplasmic reticulum organization

Vocabulary: **Cellular Component**
Term	Definition
GO:0005789	endoplasmic reticulum membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR009787	Jagunal

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007029	endoplasmic reticulum organization
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08009-RA	Carg08009-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009787	Protein jagunal	PFAM	PF07086	Jagunal	coord: 67..191 e-value: 4.4E-9 score: 36.6
IPR009787	Protein jagunal	PANTHER	PTHR20955	UNCHARACTERIZED	coord: 58..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	PANTHER	PTHR20955:SF1	PROTEIN JAGUNAL HOMOLOG 1	coord: 58..228

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08009	Csa3G175730	Cucumber (Chinese Long) v2	carcuB0401
Carg08009	MELO3C006818	Melon (DHL92) v3.5.1	carmeB0381
Carg08009	CSPI03G15990	Wild cucumber (PI 183967)	carcpiB0406
Carg08009	Cucsa.251590	Cucumber (Gy14) v1	carcgyB0437
Carg08009	CmaCh04G003330	Cucurbita maxima (Rimu)	carcmaB0529
Carg08009	CmaCh16G001870	Cucurbita maxima (Rimu)	carcmaB0526
Carg08009	CmoCh16G001970	Cucurbita moschata (Rifu)	carcmoB0509
Carg08009	Lsi05G013200	Bottle gourd (USVL1VR-Ls)	carlsiB345
Carg08009	Cp4.1LG01g03690	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08009	Cp4.1LG14g05670	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08009	CsGy3G016060	Cucumber (Gy14) v2	carcgybB0381
Carg08009	MELO3C006818.2	Melon (DHL92) v3.6.1	carmedB0385
Carg08009	CsaV3_3G016200	Cucumber (Chinese Long) v3	carcucB0404
Carg08009	Bhi01G000899	Wax gourd	carwgoB0461

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08009	Carg16734	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08009	Cucurbita moschata (Rifu)	carcmoB0514
Carg08009	Watermelon (Charleston Gray)	carwcgB0372
Carg08009	Watermelon (97103) v1	carwmB0373
Carg08009	Watermelon (97103) v2	carwmbB0398