Carg07480 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGGTTAGTGGTGAATTTGAAGGCAAAAATCATGAAGTCGTTGAAGATGAAGAAGGCCACAGATAGTTACGATAAGATGGAGAAAAGTGAAAGCATGCGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAGACCATGAAAATCGCTGACTCTCCCTCTTCAAAAACTTACGCTCTCTGA ATGAAGAGGTTAGTGGTGAATTTGAAGGCAAAAATCATGAAGTCGTTGAAGATGAAGAAGGCCACAGATAGTTACGATAAGATGGAGAAAAGTGAAAGCATGCGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAGACCATGAAAATCGCTGACTCTCCCTCTTCAAAAACTTACGCTCTCTGA ATGAAGAGGTTAGTGGTGAATTTGAAGGCAAAAATCATGAAGTCGTTGAAGATGAAGAAGGCCACAGATAGTTACGATAAGATGGAGAAAAGTGAAAGCATGCGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAGACCATGAAAATCGCTGACTCTCCCTCTTCAAAAACTTACGCTCTCTGA MKRLVVNLKAKIMKSLKMKKATDSYDKMEKSESMRVEIRSRKAQKLIQQTMKIADSPSSKTYAL
BLAST of Carg07480 vs. NCBI nr
Match: OAY60374.1 (hypothetical protein MANES_01G107200 [Manihot esculenta]) HSP 1 Score: 77.8 bits (190), Expect = 1.5e-11 Identity = 48/63 (76.19%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Carg07480 vs. NCBI nr
Match: PHT91693.1 (hypothetical protein T459_06806 [Capsicum annuum]) HSP 1 Score: 75.5 bits (184), Expect = 7.4e-11 Identity = 42/61 (68.85%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Carg07480 vs. NCBI nr
Match: PIA39540.1 (hypothetical protein AQUCO_02600176v1 [Aquilegia coerulea]) HSP 1 Score: 75.1 bits (183), Expect = 9.7e-11 Identity = 42/63 (66.67%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of Carg07480 vs. NCBI nr
Match: CDP02385.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10 Identity = 42/63 (66.67%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Carg07480 vs. NCBI nr
Match: OIT20748.1 (hypothetical protein A4A49_57847 [Nicotiana attenuata]) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-10 Identity = 41/61 (67.21%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Carg07480 vs. TrEMBL
Match: tr|A0A2C9WL25|A0A2C9WL25_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G107200 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 9.9e-12 Identity = 48/63 (76.19%), Postives = 57/63 (90.48%), Query Frame = 0
BLAST of Carg07480 vs. TrEMBL
Match: tr|M1AMJ5|M1AMJ5_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-11 Identity = 42/61 (68.85%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Carg07480 vs. TrEMBL
Match: tr|A0A2G3ABZ3|A0A2G3ABZ3_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_06806 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-11 Identity = 42/61 (68.85%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Carg07480 vs. TrEMBL
Match: tr|K4BCB7|K4BCB7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.9e-11 Identity = 42/61 (68.85%), Postives = 54/61 (88.52%), Query Frame = 0
BLAST of Carg07480 vs. TrEMBL
Match: tr|A0A2G5D7Q5|A0A2G5D7Q5_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02600176v1 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.4e-11 Identity = 42/63 (66.67%), Postives = 56/63 (88.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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