Bhi01G001452 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G001452
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Glucose-repressible alcohol dehydrogenase transcriptional effector like
Location	chr1 : 41640086 .. 41640727 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAATATCTTAATGTTTACATTGTGACCACATCAAACCCAAACCCCACATTTAATTTTTCATTCTCAACTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTAAACTCTCTCTCTCTTATTTTGCCATATTTGTTGTAAAAATTTGCAGGTTTTGAAAGGAAAAGATGGTGATGGTGTTGGGTATAGAGAGGGTAGTAGTGAATTTGAAAGCAAAAATCATGAAGTCATTGAAGATGAAGATGAAGGCAACAACAACAACAAATAATTATGATAAGATTGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAAACCATGAAAATTGCTGACTCTCCCTCTTCAAAAACTTATGCTTTTTGATTCTAATATTTCTTCTTCTTTACTTACACACTTGTTTCCAATATTGCAACTCCCTCTTCCTTTTAATCTTTAATCAATTTCACCCTTTATGTGTACTTGCCTTCATCACTAATATGAAGGGGAAAAAAACTCATTTCCTTCTTCATCTTCTGTTTTTTTTTTTCTCTTTTTATTAAAGTAGTACTTTCGTTCTTACGATGAGAGTGGAAGATTGAACCATCAA

mRNA sequence

TTCAAATATCTTAATGTTTACATTGTGACCACATCAAACCCAAACCCCACATTTAATTTTTCATTCTCAACTATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTCTAAACTCTCTCTCTCTTATTTTGCCATATTTGTTGTAAAAATTTGCAGGTTTTGAAAGGAAAAGATGGTGATGGTGTTGGGTATAGAGAGGGTAGTAGTGAATTTGAAAGCAAAAATCATGAAGTCATTGAAGATGAAGATGAAGGCAACAACAACAACAAATAATTATGATAAGATTGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAAACCATGAAAATTGCTGACTCTCCCTCTTCAAAAACTTATGCTTTTTGATTCTAATATTTCTTCTTCTTTACTTACACACTTGTTTCCAATATTGCAACTCCCTCTTCCTTTTAATCTTTAATCAATTTCACCCTTTATGTGTACTTGCCTTCATCACTAATATGAAGGGGAAAAAAACTCATTTCCTTCTTCATCTTCTGTTTTTTTTTTTCTCTTTTTATTAAAGTAGTACTTTCGTTCTTACGATGAGAGTGGAAGATTGAACCATCAA

Coding sequence (CDS)

ATGGTGATGGTGTTGGGTATAGAGAGGGTAGTAGTGAATTTGAAAGCAAAAATCATGAAGTCATTGAAGATGAAGATGAAGGCAACAACAACAACAAATAATTATGATAAGATTGAGAAAAGTGAAAGCATGAGAGTTGAAATCAGAAGCAGAAAGGCCCAAAAGCTCATCCAACAAACCATGAAAATTGCTGACTCTCCCTCTTCAAAAACTTATGCTTTTTGA

Protein sequence

MVMVLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKIADSPSSKTYAF

Homology

[Close]

BLAST of Bhi01G001452 vs. TrEMBL
Match: tr|A0A2C9WL25|A0A2C9WL25_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G107200 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.2e-14
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 3  MVLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMK 62
          MV+G+ER+VV+LK+KI +SLKMK         YDKIEKSESMRVEIRSRKA+KLI++TMK
Sbjct: 1  MVMGLERLVVSLKSKI-RSLKMK-------KLYDKIEKSESMRVEIRSRKARKLIEETMK 60

Query: 63 IADSPSSKTYAF 75
          IADSP SKTYAF
Sbjct: 61 IADSPKSKTYAF 64

[Close]

BLAST of Bhi01G001452 vs. TrEMBL
Match: tr|M1AMJ5|M1AMJ5_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-12
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 5  LGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKIA 64
          +G ER++VNLK K+ +S KMK        +YDKIEKSESMRVEIRS+KA+KLI+QT+KIA
Sbjct: 1  MGFERLMVNLKTKLRRSFKMK-------ESYDKIEKSESMRVEIRSKKARKLIEQTLKIA 60

Query: 65 DSPSSKTYAF 75
          DSP S++Y F
Sbjct: 61 DSPKSRSYPF 63

[Close]

BLAST of Bhi01G001452 vs. TrEMBL
Match: tr|A0A2G3ABZ3|A0A2G3ABZ3_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_06806 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-12
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G ER++VNLK K+ +S KMK        +YDKIEKSESMRVEIRS+KA+KLI+QT+KI
Sbjct: 1  MMGFERLMVNLKTKLRRSFKMK-------ESYDKIEKSESMRVEIRSKKARKLIEQTLKI 60

Query: 64 ADSPSSKTYAF 75
          ADSP S++Y F
Sbjct: 61 ADSPKSRSYPF 64

[Close]

BLAST of Bhi01G001452 vs. TrEMBL
Match: tr|A0A2G5D7Q5|A0A2G5D7Q5_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02600176v1 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-12
Identity = 43/71 (60.56%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G+ER+V+NLK K++K+LK K         YDK+EKSESMRVEIRS+KA+KLI++T+KI
Sbjct: 1  MMGLERLVLNLKTKVLKALKPK-------KLYDKVEKSESMRVEIRSKKARKLIEETLKI 60

Query: 64 ADSPSSKTYAF 75
          ADSP +K+YAF
Sbjct: 61 ADSPKNKSYAF 64

[Close]

BLAST of Bhi01G001452 vs. TrEMBL
Match: tr|K4BCB7|K4BCB7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.9e-12
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G ER++VNLK K+ +S KMK        +YDKIEKSESMRVEIRS+KA+KLI+QT+KI
Sbjct: 1  MMGFERLMVNLKTKLRRSFKMK-------ESYDKIEKSESMRVEIRSKKARKLIEQTLKI 60

Query: 64 ADSPSSKTYAF 75
          ADSP S++Y F
Sbjct: 61 ADSPKSRSYPF 64

[Close]

BLAST of Bhi01G001452 vs. NCBI nr
Match: OAY60374.1 (hypothetical protein MANES_01G107200 [Manihot esculenta])

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 3  MVLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMK 62
          MV+G+ER+VV+LK+KI +SLKMK         YDKIEKSESMRVEIRSRKA+KLI++TMK
Sbjct: 1  MVMGLERLVVSLKSKI-RSLKMK-------KLYDKIEKSESMRVEIRSRKARKLIEETMK 60

Query: 63 IADSPSSKTYAF 75
          IADSP SKTYAF
Sbjct: 61 IADSPKSKTYAF 64

[Close]

BLAST of Bhi01G001452 vs. NCBI nr
Match: PHT91693.1 (hypothetical protein T459_06806 [Capsicum annuum])

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-12
Identity = 44/71 (61.97%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G ER++VNLK K+ +S KMK        +YDKIEKSESMRVEIRS+KA+KLI+QT+KI
Sbjct: 1  MMGFERLMVNLKTKLRRSFKMK-------ESYDKIEKSESMRVEIRSKKARKLIEQTLKI 60

Query: 64 ADSPSSKTYAF 75
          ADSP S++Y F
Sbjct: 61 ADSPKSRSYPF 64

[Close]

BLAST of Bhi01G001452 vs. NCBI nr
Match: PIA39540.1 (hypothetical protein AQUCO_02600176v1 [Aquilegia coerulea])

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-12
Identity = 43/71 (60.56%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G+ER+V+NLK K++K+LK K         YDK+EKSESMRVEIRS+KA+KLI++T+KI
Sbjct: 1  MMGLERLVLNLKTKVLKALKPK-------KLYDKVEKSESMRVEIRSKKARKLIEETLKI 60

Query: 64 ADSPSSKTYAF 75
          ADSP +K+YAF
Sbjct: 61 ADSPKNKSYAF 64

[Close]

BLAST of Bhi01G001452 vs. NCBI nr
Match: ONI18835.1 (hypothetical protein PRUPE_3G242600 [Prunus persica] >ONI18836.1 hypothetical protein PRUPE_3G242600 [Prunus persica])

HSP 1 Score: 79.0 bits (193), Expect = 7.8e-12
Identity = 46/73 (63.01%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 2  VMVLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTM 61
          +M+LG+ER+V+NLK+K ++SLK+  K       YDKIEKSESMRVEIRS+KA+KLI++T+
Sbjct: 1  MMMLGLERLVLNLKSK-LRSLKVNKKP------YDKIEKSESMRVEIRSKKARKLIEKTL 60

Query: 62 KIADSPSSKTYAF 75
          K+ADSP SKT+AF
Sbjct: 61 KVADSPKSKTFAF 66

[Close]

BLAST of Bhi01G001452 vs. NCBI nr
Match: OIT20748.1 (hypothetical protein A4A49_57847 [Nicotiana attenuata])

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 4  VLGIERVVVNLKAKIMKSLKMKMKATTTTNNYDKIEKSESMRVEIRSRKAQKLIQQTMKI 63
          ++G ER++VNLK K+ +SLKMK        +YDKIEKSESMRVEIRS+KA+KLI+QT++I
Sbjct: 1  MMGFERLMVNLKTKLRRSLKMK-------ESYDKIEKSESMRVEIRSKKARKLIEQTLQI 60

Query: 64 ADSPSSKTYAF 75
          ADSP +++Y F
Sbjct: 61 ADSPKTRSYTF 64

The following BLAST results are available for this feature:

BLAST of Bhi01G001452 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G001452 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G001452 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2C9WL25\|A0A2C9WL25_MANES	7.2e-14	72.22	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G107200 PE=4 SV=...	[more]
tr\|M1AMJ5\|M1AMJ5_SOLTU	3.9e-12	62.86	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]
tr\|A0A2G3ABZ3\|A0A2G3ABZ3_CAPAN	3.9e-12	61.97	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_06806 PE=4 SV=1	[more]
tr\|A0A2G5D7Q5\|A0A2G5D7Q5_AQUCA	3.9e-12	60.56	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_02600176v1 PE=4...	[more]
tr\|K4BCB7\|K4BCB7_SOLLC	3.9e-12	61.97	Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1	[more]

BLAST of Bhi01G001452 vs. NCBI nr


Match Name	E-value	Identity	Description
OAY60374.1	1.1e-13	72.22	hypothetical protein MANES_01G107200 [Manihot esculenta]	[more]
PHT91693.1	5.9e-12	61.97	hypothetical protein T459_06806 [Capsicum annuum]	[more]
PIA39540.1	5.9e-12	60.56	hypothetical protein AQUCO_02600176v1 [Aquilegia coerulea]	[more]
ONI18835.1	7.8e-12	63.01	hypothetical protein PRUPE_3G242600 [Prunus persica] >ONI18836.1 hypothetical pr...	[more]
OIT20748.1	1.0e-11	60.56	hypothetical protein A4A49_57847 [Nicotiana attenuata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001452	Bhi01M001452	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34563:SF1	SUBFAMILY NOT NAMED	coord: 1..74
None	No IPR available	PANTHER	PTHR34563	FAMILY NOT NAMED	coord: 1..74

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi01G001452	MELO3C023781	Melon (DHL92) v3.5.1	mewgoB542
Bhi01G001452	Cucsa.031520	Cucumber (Gy14) v1	cgywgoB005
Bhi01G001452	MELO3C023781.2	Melon (DHL92) v3.6.1	medwgoB535
Bhi01G001452	Carg07480	Silver-seed gourd	carwgoB0896

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G001452	Cucumber (Chinese Long) v3	cucwgoB274
Bhi01G001452	Cucumber (Chinese Long) v2	cuwgoB271
Bhi01G001452	Bottle gourd (USVL1VR-Ls)	lsiwgoB447
Bhi01G001452	Watermelon (Charleston Gray)	wcgwgoB441
Bhi01G001452	Watermelon (97103) v2	wgowmbB194
Bhi01G001452	Watermelon (97103) v1	wgowmB217
Bhi01G001452	Silver-seed gourd	carwgoB0584
Bhi01G001452	Cucumber (Gy14) v2	cgybwgoB259
Bhi01G001452	Cucurbita maxima (Rimu)	cmawgoB0319
Bhi01G001452	Cucurbita maxima (Rimu)	cmawgoB0562
Bhi01G001452	Cucurbita moschata (Rifu)	cmowgoB0307
Bhi01G001452	Cucurbita moschata (Rifu)	cmowgoB0559
Bhi01G001452	Cucurbita pepo (Zucchini)	cpewgoB0673
Bhi01G001452	Cucurbita pepo (Zucchini)	cpewgoB0773
Bhi01G001452	Wild cucumber (PI 183967)	cpiwgoB271