Carg07436 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07436
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cucurbita_argyrosperma_scaffold_019 : 813129 .. 816155 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATATTTAAAATTGGGAAAAATAAGTTTATTTTGTTGGAGATACCAAATTCCGGCAACCCCAATCTTGGATTTCTTGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTAATCTCTCCAACAATTTCCTGATTTATGAACTTCCTGGTCCATTTCTTTGATTTTTGTTTGAATTTTGTGGTGCTTTTTAGTGGGTTTGAATTATGAGGTTTTGGTTTCTGGCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGTATTTTCTGCATCATTTTACTTTTATCATGAAATCCTTCATTATTTTTTTTTTCTGACTTATGCATTATAGTTCTGTTCTAAAGTAGTTGGATTGGAGGATACTCTCGTAGAATCTTTATGGTTCAAACCTGCTTCCCTGCATTCTTTTATAATGGTTTTAGTTTTGAAATCAAATGAGTTTCTTATTGCTCCAATGCGCTCGTATGTAGAATGGAAATTGCATAGTTCAACTTTTTTTACTTAAATGAGTTCAACTGCCTTCTGTGTTGATCAAGTTCAGATAATACAACAACAATTTCTCTTTCAGCCTTTCACCCCCTTTGCATTGAATGTAGTTCTCAATCCAAGATAAACATATTTCAAAATTGTGGAATCATTGAAACCTTTAAGATGCAGTGTCGTCGGAGATTGAGAAAAAATCAAGTTACATGGATTTTGACTTGATTATTCTCACTTTGGAAGTAGCTTGGGAACTGCCATATTTGAGTAAGGATCATAATTCGTCTAGTTGTGAGGCAAGAGTGTCTGTTATTGGTTGTGTTTTTGTATTTTGTTTTGTGAATGAAATATTATGAGACCAATTCATGTGTTCGAATCCGCGAACCGCTTGATATGCTTAGTTTTCAAAAATATTCTTATTTATCAGGTGTTCAGTTGGCTAGTTTTTACTTTTTAGCACCATGGACGTAACCTTTGCCATCGACCAAATAAAAATTATTGTATGTGGTGTGGCATTTATGGGGCAAGAGCTTGGATGATATGCGTATAACCTGATTCAAGTTCATAACAGATTCTCGGTGTGGGGCCGGTTTCATTTCTCCAACGGTCTTAAGAAAGATGTTTTAAAAAAAAAAAATTTGTAACATCCATTCTATAGCCAGTCCAGTTTCCTCCCGGATGCCTCGGTATTCATTTGTAGTAACTTTGGCAGATGAAACCACGTACCTACCGAAGCAGTTGTCTATTCCATTGTTTCTCATAACTAAAAACTGCCCTTCTTTTGTTTGTTTATATTATGTTCCTTGGTCTCTTCATTCTTCAATCATATAAAGGGCTTCTCAAGTACATCTTTGGAATTCCACGTTTTTTTTTCTTTTGGGCTATCTCTAATGTTGAAGGGTGTCATTTCAATCCATGTTTGTTGCTCGACATTTTTTTTTGGCTGCATGTAGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGTGAGTAGTAGACTATTATTTTCTGTGCTTTGATGTTAAGTGAATGCCATTTTGTCCACCGTGATTGTAATTTTTGTTTCACCTTCCAATTAAGTAATTCCTGATTGTTGCATAATTTAGTTGTTATGAACTCGATTTATGTGTGTGAACTTGTATATGAGGTCGCAACGTTTTGGTGCTATGCATATAAGAGCAGCATGGAATCAAATACAGGCAACTTCCCCAAAATTTATACCTATTGACATTGCCTGTTGATCTATGTGATATGTTGATTTGAGCTTCCACTTCTGGTCTACCCGAATCACTTTGTAATTCGCTGGTTAACCCGTCCATGCCAGGCGACAGATATGAGCATCCGGCTACGAGAGATGGCATATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGGTTTGCGTCTACATTGTGTCTTTAACTATCTATCTGGTTCTCAGTTTCTTGCTGGAACCCTCTTGATGTTTACGAGTTTTCGTTTGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCGTTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGAGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGACAGGACACCCGCCCTGTTCTTCCATTAATGTATCCTACTTTGTTCTTTCCATTCTCAAATAGCTTCTTCTCTGTAAGATATTAAAGGTTATTATTACCAATCAGTTAAAACCAGTTATAGGTTTTGGAAAATTCAAGAGTCCAAGCAGTCGATATCTGAATCCGTGTCGAAACCTCAGTACAACATGAACGGTGAG

mRNA sequence

AATATATTTAAAATTGGGAAAAATAAGTTTATTTTGTTGGAGATACCAAATTCCGGCAACCCCAATCTTGGATTTCTTGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAGATGGCATATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCGTTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGAGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGACAGGACACCCGCCCTGTTCTTCCATTAATGTATCCTACTTTGTTCTTTCCATTCTCAAATAGCTTCTTCTCTGTAAGATATTAAAGGTTATTATTACCAATCAGTTAAAACCAGTTATAGGTTTTGGAAAATTCAAGAGTCCAAGCAGTCGATATCTGAATCCGTGTCGAAACCTCAGTACAACATGAACGGTGAG

Coding sequence (CDS)

AATATATTTAAAATTGGGAAAAATAAGTTTATTTTGTTGGAGATACCAAATTCCGGCAACCCCAATCTTGGATTTCTTGACGGCTCCCTGAAAGGAACGAAAATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCTTCACAGCAGGCTTATGTGCTTCAACCATGGAGTTTTAGCTTCTCCCTTTCCAGTTTCCACTCCTTTCAAGCACTCTCATGGCGCTAATTCCAGTTCTAATGCTTTTAGAATCAGGAAATCCGTTCCCGTTGCGGCGGTCAAGGCCTCGCTCAGTTCGTCGCCTCTGAGACGAACCTTATCCAGTAATTGGGATGTTTTGGGAAACTATTCTGCAGCTTCGGCGCCAGCGCTGCCTCGATTCGAAGAGCTCGATACAACCAATATGCTTCTACGCCAGCGAATCATCTTCTTGGGCTCTCAGGTTGATGACATGACGGCAGATTTCATCATAAGCCAGCTACTCTTTCTTGATGCTGAAGATCCAACAAAGGATATCAAATTGTTAATCAACTCACCTGGTGGTTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCCGATGTTTCAACGGTTTGTATGGGACTTGCCGCATCCATGGGAGCTTTTCTTCTAGCTGCTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGTAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGGAGAGCGACAGATATGAGCATCCGGCTACGAGAGATGGCATATCACAAGATTAAGCTGAACAAAATTTTGTCTAGGATCACAGGAAAACCATTGGAGCAGATTGAATTGGACACGGATCGTGATAACTTCATGAATCCCTGGGAAGCAAAGGAATATGGTTTGATTGATGAAGTTATTGATGATGGAAAGCCAGGACTCGTTGCTCCAATCGCAGAAGCCAATCCTCCGCCCAAGACCCGAGTTTGGGATCTATGGAAGATCGAAGGGAGTCGTAAAGCTAAGAAGAATTTGCCTTCAGAAACCAAGATTTTGCAGAATGGATACCAAGGAAGTGATGAGGAGAGCAGTCCCCAGCCAGAAACAGAAGAACCAAGTCCTAAATGA

Protein sequence

NIFKIGKNKFILLEIPNSGNPNLGFLDGSLKGTKMELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK

Homology

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BLAST of Carg07436 vs. NCBI nr
Match: XP_022948597.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 664.5 bits (1713), Expect = 2.2e-187
Identity = 334/336 (99.40%), Postives = 335/336 (99.70%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154
           ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 335 KAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK 371
           KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

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BLAST of Carg07436 vs. NCBI nr
Match: XP_022997788.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 657.5 bits (1695), Expect = 2.6e-185
Identity = 330/336 (98.21%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           MELSFTYA SPSLHSRLMC+NHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MELSFTYAASPSLHSRLMCYNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154
           ASLSSSPLRRTLSSNWDVLGNYSAAS PALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRRTLSSNWDVLGNYSAASTPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274
           LLA+GSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLASGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 335 KAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK 371
           KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

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BLAST of Carg07436 vs. NCBI nr
Match: XP_023522581.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 657.1 bits (1694), Expect = 3.4e-185
Identity = 331/336 (98.51%), Postives = 333/336 (99.11%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           M+LSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK
Sbjct: 1   MDLSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154
           ASLSSSPLR TLSSNWDVLGNYSAASAP+LPRFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSPLRPTLSSNWDVLGNYSAASAPSLPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214
           FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF
Sbjct: 121 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 180

Query: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 240

Query: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334
           EQIELDTDRDNFMNPWEAK YGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKVYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 300

Query: 335 KAKKNLPSETKILQNGYQGSDEESSPQPETEEPSPK 371
           KAKKNLPSETKILQNGYQGSDEE SPQPETEEPSPK
Sbjct: 301 KAKKNLPSETKILQNGYQGSDEERSPQPETEEPSPK 336

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BLAST of Carg07436 vs. NCBI nr
Match: XP_022143418.1 (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia])

HSP 1 Score: 558.9 bits (1439), Expect = 1.3e-155
Identity = 288/338 (85.21%), Postives = 304/338 (89.94%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           ME+SFTY PSPS   RLM F+HGVL+S FP+ TP KHSHG NSS N  R  KS P+  VK
Sbjct: 1   MEMSFTYTPSPS-PQRLMRFDHGVLSSQFPLFTPRKHSHGGNSSLNGLRTPKSAPL--VK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154
           ASLSSS +RRTLSSNWDVL N+SA SAP+L RFEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  ASLSSSSMRRTLSSNWDVLENFSATSAPSLARFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214
           FIISQLLFLDAED TKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAF
Sbjct: 121 FIISQLLFLDAEDSTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180

Query: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274
           LLAAGSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPL
Sbjct: 181 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334
           EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA+A  PPKTRVWDLWK+EGSR
Sbjct: 241 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIADAAAPPKTRVWDLWKVEGSR 300

Query: 335 KAKKNLPSETKILQNGY---QGSDEESSPQPETEEPSP 370
           KAKKNLPSE KILQNGY   QG+DEE   Q ETEEPSP
Sbjct: 301 KAKKNLPSEDKILQNGYQGGQGNDEERGTQQETEEPSP 335

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BLAST of Carg07436 vs. NCBI nr
Match: XP_008457103.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 550.8 bits (1418), Expect = 3.5e-153
Identity = 287/340 (84.41%), Postives = 307/340 (90.29%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGV-LASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAA 94
           MELSFT+APSPS +  L  F+HG+  +S  P+STP  HSHG N +SN FRIR  SVPV  
Sbjct: 1   MELSFTHAPSPSPYG-LKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLN 60

Query: 95  VKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMT 154
              SLSSS LRRTLSSNWDVL NYSA+SAP+LPRFEELDTTNMLLRQRIIFLGSQVDD+T
Sbjct: 61  -HPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVT 120

Query: 155 ADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMG 214
           ADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVST+C+GLAASMG
Sbjct: 121 ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMG 180

Query: 215 AFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGK 274
           AFLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGK
Sbjct: 181 AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 240

Query: 275 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEG 334
           PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEA PPPKTRVWDLWK+EG
Sbjct: 241 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEG 300

Query: 335 SRKAKKNLPSETKILQNGYQ---GSDEESSPQPETEEPSP 370
           SRKAKKNLPSE+KIL+NGYQ   GSDEE   Q ETEEPSP
Sbjct: 301 SRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSP 338

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BLAST of Carg07436 vs. TAIR10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3)

HSP 1 Score: 409.1 bits (1050), Expect = 3.0e-114
Identity = 204/273 (74.73%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 83  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLR 142
           RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLR
Sbjct: 33  RIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLR 92

Query: 143 QRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKA 202
           QRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INSPGGS+TAGMGIYDAMK CKA
Sbjct: 93  QRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKA 152

Query: 203 DVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYH 262
           DVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YH
Sbjct: 153 DVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYH 212

Query: 263 KIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANP 322
           KIKLNKI SRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API +  P
Sbjct: 213 KIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTP 272

Query: 323 PPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY 352
           PPKT+VWDLWK+EG++K   NLPSE  + QNGY
Sbjct: 273 PPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of Carg07436 vs. TAIR10
Match: AT1G02560.1 (nuclear encoded CLP protease 5)

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-53
Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 0


Query: 110 WDVLGNYSAASAPALPRFEE------------LDTTNMLLRQRIIFLGSQVDDMTADFII 169
           W +  +    S+P  P + +                + L + RII  G  VDD  A+ I+
Sbjct: 81  WSIRDDLQVPSSPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIV 140

Query: 170 SQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLA 229
           +QLL+LDA DPTKDI + +NSPGGSVTAGM I+D M+  + DVSTVC+GLAASMGAFLL+
Sbjct: 141 AQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLS 200

Query: 230 AGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQI 289
           AG+KGKR+ +PN R+MIHQPLG A G  TD+ I+  EM +HK  LN  L+  TG+ LE+I
Sbjct: 201 AGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKI 260

Query: 290 ELDTDRDNFMNPWEAKEYGLIDEVI 303
             DTDRD FM+  EAKEYGLID VI
Sbjct: 261 NQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Carg07436 vs. TAIR10
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-52
Identity = 102/194 (52.58%), Postives = 137/194 (70.62%), Query Frame = 0


Query: 126 RFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTA 185
           R  E D   +LLR+RI+FLGS +DD  AD I+SQLL LDA+DP KDIKL INSPGGS++A
Sbjct: 74  RGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSA 133

Query: 186 GMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRA 245
            M IYD ++L +ADVST+ +G+AAS  + +L AG+KGKRF MPN R+MIHQPLG A G+A
Sbjct: 134 TMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQA 193

Query: 246 TDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDG 305
            D+ I+ +E+ ++K  +  I++  T +  EQ+  D DRD +M+P EA EYGLID VID  
Sbjct: 194 IDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGD 253

Query: 306 KPGLVAPIAEANPP 320
               + P+ +   P
Sbjct: 254 SIIPLEPVPDRVKP 267

[Close]

BLAST of Carg07436 vs. TAIR10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-42
Identity = 80/174 (45.98%), Postives = 125/174 (71.84%), Query Frame = 0


Query: 131 DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 190
           D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I + +NSPGG VTAG+ IY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 191 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 250
           D M+  ++ +ST+C+G AASM + LLAAG+KG+R  +PN  VMIHQP G   G+A D++I
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 251 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD 305
             +++      LN++  + TG+PL+ +  + DRD+FM P EAK +G+IDEVID+
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

[Close]

BLAST of Carg07436 vs. TAIR10
Match: AT1G11750.2 (CLP protease proteolytic subunit 6)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35
Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 130 LDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGI 189
           LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI + +N PGGS  + + I
Sbjct: 113 LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 172

Query: 190 YDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMS 249
           YD M   K  V TV  G+AAS GA LLA G KG R+ MPN RVMIHQP    GG   D+ 
Sbjct: 173 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 232

Query: 250 IRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID 304
            ++ E    + K++++ +  TG+PLE+++  T+RD F++  EA E+GLID +++
Sbjct: 233 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLE 286

[Close]

BLAST of Carg07436 vs. Swiss-Prot
Match: sp|Q9SXJ6|CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 5.3e-113
Identity = 204/273 (74.73%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 83  RIRKSVPVAAVKASLS-SSPLRRTLSSNWDV--LGNYSAASAPA-LPRFEELDTTNMLLR 142
           RI K+     V++S+S S P R+TLSSNWDV      S A +P+ LP FEELDTTNMLLR
Sbjct: 33  RIPKTSKPFCVRSSMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEELDTTNMLLR 92

Query: 143 QRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKA 202
           QRI+FLGSQVDDMTAD +ISQLL LDAED  +DI L INSPGGS+TAGMGIYDAMK CKA
Sbjct: 93  QRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKA 152

Query: 203 DVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYH 262
           DVSTVC+GLAASMGAFLLA+GSKGKR+CMPN +VMIHQPLGTAGG+AT+MSIR+REM YH
Sbjct: 153 DVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYH 212

Query: 263 KIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANP 322
           KIKLNKI SRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API +  P
Sbjct: 213 KIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIGDGTP 272

Query: 323 PPKTRVWDLWKIEGSRKAKKNLPSETKILQNGY 352
           PPKT+VWDLWK+EG++K   NLPSE  + QNGY
Sbjct: 273 PPKTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

[Close]

BLAST of Carg07436 vs. Swiss-Prot
Match: sp|Q3MFR5|CLPP1_ANAVT (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-58
Identity = 116/187 (62.03%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 131 DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 190
           D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 191 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 250
           D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ R+MIHQPLG A G+ATD+ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 251 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLV 310
           + RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EA++YGLID+VID    G  
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDYGLIDQVIDRHAAG-S 197

Query: 311 APIAEAN 318
            P+A  N
Sbjct: 198 RPVAMVN 203

[Close]

BLAST of Carg07436 vs. Swiss-Prot
Match: sp|Q8YXH5|CLPP1_NOSS1 (ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP1 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 6.4e-58
Identity = 112/173 (64.74%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 131 DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 190
           D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L INSPGGSVTAGMGI+
Sbjct: 18  DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 77

Query: 191 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 250
           D MK  + DV T+C GLAASMGAFLL+AG+KGKR  +P+ R+MIHQPLG A G+ATD+ I
Sbjct: 78  DTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 137

Query: 251 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID 304
           + RE+ YHK +LN  L+  TG+P+E+I  DT+RD FM+P EAK+YGLID+VID
Sbjct: 138 QAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVID 190

[Close]

BLAST of Carg07436 vs. Swiss-Prot
Match: sp|O34125|CLPP2_SYNE7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-57
Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 131 DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 190
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 191 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 250
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A D+ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 251 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI 303
           + RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of Carg07436 vs. Swiss-Prot
Match: sp|Q5N1P6|CLPP3_SYNP6 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.9e-57
Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 0


Query: 131 DTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIY 190
           D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L INSPGGSVTAGM IY
Sbjct: 53  DIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQLYINSPGGSVTAGMAIY 112

Query: 191 DAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSI 250
           D M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ R+MIHQPLG A G+A D+ I
Sbjct: 113 DTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIMIHQPLGGAQGQAVDIEI 172

Query: 251 RLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI 303
           + RE+ YHK  LN +L++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Sbjct: 173 QAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAKAYGLIDQVL 224

[Close]

BLAST of Carg07436 vs. TrEMBL
Match: tr|A0A1S3C615|A0A1S3C615_CUCME (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103496858 PE=3 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 2.3e-153
Identity = 287/340 (84.41%), Postives = 307/340 (90.29%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGV-LASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAA 94
           MELSFT+APSPS +  L  F+HG+  +S  P+STP  HSHG N +SN FRIR  SVPV  
Sbjct: 1   MELSFTHAPSPSPYG-LKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLN 60

Query: 95  VKASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMT 154
              SLSSS LRRTLSSNWDVL NYSA+SAP+LPRFEELDTTNMLLRQRIIFLGSQVDD+T
Sbjct: 61  -HPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVT 120

Query: 155 ADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMG 214
           ADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVST+C+GLAASMG
Sbjct: 121 ADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMG 180

Query: 215 AFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGK 274
           AFLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGK
Sbjct: 181 AFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGK 240

Query: 275 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEG 334
           PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEA PPPKTRVWDLWK+EG
Sbjct: 241 PLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEG 300

Query: 335 SRKAKKNLPSETKILQNGYQ---GSDEESSPQPETEEPSP 370
           SRKAKKNLPSE+KIL+NGYQ   GSDEE   Q ETEEPSP
Sbjct: 301 SRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSP 338

[Close]

BLAST of Carg07436 vs. TrEMBL
Match: tr|A0A0A0LA84|A0A0A0LA84_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 2.5e-152
Identity = 283/340 (83.24%), Postives = 304/340 (89.41%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRK-SVPVAAV 94
           MELSFT+APSPS +  L   +HG  +S FP+STP KHSHG N +SNAFRIR  SVPV   
Sbjct: 1   MELSFTHAPSPSPYG-LKRSDHGFQSSHFPISTPSKHSHGGNFTSNAFRIRNCSVPVVN- 60

Query: 95  KASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTA 154
             S SSS LRRTLSSNWDV  NYS +SA +LPRFEELDTTNMLLRQRIIFLGSQVDDMTA
Sbjct: 61  HPSHSSSSLRRTLSSNWDVFSNYSVSSARSLPRFEELDTTNMLLRQRIIFLGSQVDDMTA 120

Query: 155 DFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGA 214
           DFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGA
Sbjct: 121 DFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGA 180

Query: 215 FLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKP 274
           FLLA+GSKGKRFCMPNGRVMIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKP
Sbjct: 181 FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 240

Query: 275 LEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGS 334
           +EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEA PPPKTR+WDLWK+EGS
Sbjct: 241 IEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRIWDLWKVEGS 300

Query: 335 RKAKKNLPSETKILQNGY----QGSDEESSPQPETEEPSP 370
           RKAKKNLPSE+KIL+NGY    QGSD+E   Q ETEEPSP
Sbjct: 301 RKAKKNLPSESKILKNGYEEGGQGSDKERGGQQETEEPSP 338

[Close]

BLAST of Carg07436 vs. TrEMBL
Match: tr|A0A2I4EC12|A0A2I4EC12_9ROSI (ATP-dependent Clp protease proteolytic subunit OS=Juglans regia OX=51240 GN=LOC108988211 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.0e-133
Identity = 251/319 (78.68%), Postives = 276/319 (86.52%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           ME+S T A SP   SR MCFNHG L    PV T  K + G N++ +  R R+S PV+A+K
Sbjct: 1   MEMSLTSAASP---SRSMCFNHGALHPKSPVVTIKKIATG-NATGSGRRRRRS-PVSAIK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTAD 154
           A L+SS  ++TLSSNWD+  +YSA SAP LP FEELDTTNMLLRQRIIFLGSQVDDMTAD
Sbjct: 61  A-LNSSSSKQTLSSNWDISQDYSAISAPWLPSFEELDTTNMLLRQRIIFLGSQVDDMTAD 120

Query: 155 FIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAF 214
            IISQLLFLDAED  KDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAF
Sbjct: 121 LIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAF 180

Query: 215 LLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPL 274
           +LA+G+KGKRFCMPN RVMIHQPLGTAGG+AT+M IR+REMAYHKIKLNKI SRITGKPL
Sbjct: 181 ILASGAKGKRFCMPNARVMIHQPLGTAGGKATEMGIRIREMAYHKIKLNKIFSRITGKPL 240

Query: 275 EQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSR 334
           EQIE DTDRDNFMNPW AKEYGLID VIDDGKPGLVAPIA+A PPPKTRVWDLWK+EGSR
Sbjct: 241 EQIEADTDRDNFMNPWVAKEYGLIDAVIDDGKPGLVAPIADATPPPKTRVWDLWKVEGSR 300

Query: 335 KAKKNLPSETKILQNGYQG 354
           KAKKNLPSE KIL++GY+G
Sbjct: 301 KAKKNLPSEHKILESGYKG 313

[Close]

BLAST of Carg07436 vs. TrEMBL
Match: tr|A0A2P4J384|A0A2P4J384_QUESU (ATP-dependent Clp protease proteolytic subunit OS=Quercus suber OX=58331 GN=CFP56_14282 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 8.0e-130
Identity = 244/320 (76.25%), Postives = 271/320 (84.69%), Query Frame = 0


Query: 52  MCFNHGVLASPFPVSTPF-KHSHGANSSSNAFRIRKSVPVAAVKASLSSSPLRRTLSSNW 111
           MCFNHGVL S FP+ T   K++ G  S+    R R   P++ +KA L SS  ++TLS+NW
Sbjct: 1   MCFNHGVLHSQFPIVTIIRKNTTGLISN---IRKRSIKPISTIKA-LKSSSSKQTLSTNW 60

Query: 112 DVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQVDDMTADFIISQLLFLDAEDPTK 171
           DV  +YSA SAP LPRFEELDTTNMLLRQRI+FLGSQVDDMTAD IISQLLFLDAED  K
Sbjct: 61  DVFQDYSATSAPWLPRFEELDTTNMLLRQRILFLGSQVDDMTADLIISQLLFLDAEDSKK 120

Query: 172 DIKLLINSPGGSVTAGMGIYDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNG 231
           DIKL INSPGGS+TAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLAAGSKGKRFCMPN 
Sbjct: 121 DIKLFINSPGGSITAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLAAGSKGKRFCMPNA 180

Query: 232 RVMIHQPLGTAGGRATDMSIRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPW 291
           RVMIHQPLGT+GG+ TDMSIR+REM YHKIKLNKILSRIT KP+EQIE DTDRDNFMNPW
Sbjct: 181 RVMIHQPLGTSGGKVTDMSIRIREMMYHKIKLNKILSRITEKPIEQIEADTDRDNFMNPW 240

Query: 292 EAKEYGLIDEVIDDGKPGLVAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNG 351
           EAKEYGLIDEVIDDGKPGLVAPI +A+PPPKTRVWDLWK+EG RKAKKNLP+E  +LQNG
Sbjct: 241 EAKEYGLIDEVIDDGKPGLVAPIGDASPPPKTRVWDLWKVEGGRKAKKNLPTEHTLLQNG 300

Query: 352 YQGSDE-ESSPQPETEEPSP 370
            +G  E +     E E+P+P
Sbjct: 301 DKGGQEGDGERGTEQEKPAP 316

[Close]

BLAST of Carg07436 vs. TrEMBL
Match: tr|A0A2N9IHV0|A0A2N9IHV0_FAGSY (ATP-dependent Clp protease proteolytic subunit OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52264 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 6.7e-129
Identity = 249/348 (71.55%), Postives = 275/348 (79.02%), Query Frame = 0


Query: 35  MELSFTYAPSPSLHSRLMCFNHGVLASPFPVSTPFKHSHGANSSSNAFRIRKSVPVAAVK 94
           ME+S TYA SP   S+ MCFNHGVL   FP+ T  K     N+++     R+  PV+ +K
Sbjct: 1   MEMSLTYAASP---SKSMCFNHGVLHPQFPIVTINK-----NTTTGIGGRRRRKPVSTIK 60

Query: 95  ASLSSSPLRRTLSSNWDVLGNYSAASAPALPRFEELDTTNMLLRQRIIFLGSQ------- 154
           A L SS  ++TLS+NWDV  + S  SAP LPRFEELDTTNMLLRQRIIFLGSQ       
Sbjct: 61  A-LKSSSSKQTLSTNWDVSQDSSVTSAPWLPRFEELDTTNMLLRQRIIFLGSQGSEILDR 120

Query: 155 ------------------VDDMTADFIISQLLFLDAEDPTKDIKLLINSPGGSVTAGMGI 214
                             VDD+TAD IISQLLFLDAED  KDIKL INSPGGSVTAGMGI
Sbjct: 121 WWVCLYRLAGCYWVLDMGVDDVTADLIISQLLFLDAEDSKKDIKLFINSPGGSVTAGMGI 180

Query: 215 YDAMKLCKADVSTVCMGLAASMGAFLLAAGSKGKRFCMPNGRVMIHQPLGTAGGRATDMS 274
           YDAMKLCKADVSTVC+GLAASMGAFLLA+G+KGKRFCMPN RVMIHQPLGTAGG+AT+MS
Sbjct: 181 YDAMKLCKADVSTVCLGLAASMGAFLLASGTKGKRFCMPNARVMIHQPLGTAGGKATEMS 240

Query: 275 IRLREMAYHKIKLNKILSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGL 334
           IR+REM YHKIKLNKILSRIT KPLEQIE+DTDRDNFMNPW+AKEYGLID VIDDGKPGL
Sbjct: 241 IRIREMVYHKIKLNKILSRITEKPLEQIEVDTDRDNFMNPWQAKEYGLIDVVIDDGKPGL 300

Query: 335 VAPIAEANPPPKTRVWDLWKIEGSRKAKKNLPSETKILQNGYQGSDEE 358
           VAPIA+A PPPKTRVWDLWK+EGSRKAKKNLP+E KILQNGY+G   E
Sbjct: 301 VAPIADAAPPPKTRVWDLWKVEGSRKAKKNLPTEHKILQNGYKGDQGE 339

The following BLAST results are available for this feature:

BLAST of Carg07436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948597.1	2.2e-187	99.40	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita mosch...	[more]
XP_022997788.1	2.6e-185	98.21	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita maxim...	[more]
XP_023522581.1	3.4e-185	98.51	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucurbita pepo ...	[more]
XP_022143418.1	1.3e-155	85.21	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica chara...	[more]
XP_008457103.1	3.5e-153	84.41	PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu...	[more]

BLAST of Carg07436 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66670.1	3.0e-114	74.73	CLP protease proteolytic subunit 3	[more]
AT1G02560.1	5.0e-53	52.68	nuclear encoded CLP protease 5	[more]
AT5G45390.1	1.1e-52	52.58	CLP protease P4	[more]
AT5G23140.1	6.7e-42	45.98	nuclear-encoded CLP protease P7	[more]
AT1G11750.2	2.1e-35	43.10	CLP protease proteolytic subunit 6	[more]

BLAST of Carg07436 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SXJ6\|CLPP3_ARATH	5.3e-113	74.73	ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t...	[more]
sp\|Q3MFR5\|CLPP1_ANAVT	3.8e-58	62.03	ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena variabilis (strain ...	[more]
sp\|Q8YXH5\|CLPP1_NOSS1	6.4e-58	64.74	ATP-dependent Clp protease proteolytic subunit 1 OS=Nostoc sp. (strain PCC 7120 ...	[more]
sp\|O34125\|CLPP2_SYNE7	1.9e-57	63.37	ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus elongatus (str...	[more]
sp\|Q5N1P6\|CLPP3_SYNP6	1.9e-57	63.37	ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus sp. (strain AT...	[more]

BLAST of Carg07436 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C615\|A0A1S3C615_CUCME	2.3e-153	84.41	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LA84\|A0A0A0LA84_CUCSA	2.5e-152	83.24	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]
tr\|A0A2I4EC12\|A0A2I4EC12_9ROSI	2.0e-133	78.68	ATP-dependent Clp protease proteolytic subunit OS=Juglans regia OX=51240 GN=LOC1...	[more]
tr\|A0A2P4J384\|A0A2P4J384_QUESU	8.0e-130	76.25	ATP-dependent Clp protease proteolytic subunit OS=Quercus suber OX=58331 GN=CFP5...	[more]
tr\|A0A2N9IHV0\|A0A2N9IHV0_FAGSY	6.7e-129	71.55	ATP-dependent Clp protease proteolytic subunit OS=Fagus sylvatica OX=28930 GN=FS...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR029045	ClpP/crotonase-like_dom_sf
IPR018215	ClpP_Ser_AS
IPR033135	ClpP_His_AS
IPR023562	ClpP/TepA
IPR001907	ClpP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07436-RA	Carg07436-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 131..146 score: 46.25 coord: 171..191 score: 63.57 coord: 202..219 score: 69.03 coord: 223..242 score: 52.0 coord: 280..299 score: 58.0
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 87..305 score: 37.187
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 131..301 e-value: 1.83986E-101 score: 298.972
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 130..303 e-value: 4.6E-74 score: 248.2
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 91..361
None	No IPR available	GENE3D	G3DSA:3.90.226.10		coord: 123..306 e-value: 2.7E-68 score: 231.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 342..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..370
None	No IPR available	PANTHER	PTHR10381:SF20	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTIC	coord: 91..361
IPR033135	ClpP, histidine active site	PROSITE	PS00382	CLP_PROTEASE_HIS	coord: 224..237
IPR018215	ClpP, Ser active site	PROSITE	PS00381	CLP_PROTEASE_SER	coord: 202..213
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	SSF52096	ClpP/crotonase	coord: 129..304

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07436	MELO3C020312	Melon (DHL92) v3.5.1	carmeB0756
Carg07436	ClCG05G010770	Watermelon (Charleston Gray)	carwcgB0739
Carg07436	Cucsa.012750	Cucumber (Gy14) v1	carcgyB0859
Carg07436	CmaCh01G003440	Cucurbita maxima (Rimu)	carcmaB1059
Carg07436	CmoCh01G003620	Cucurbita moschata (Rifu)	carcmoB1033
Carg07436	CsGy3G021100	Cucumber (Gy14) v2	carcgybB0757
Carg07436	MELO3C020312.2	Melon (DHL92) v3.6.1	carmedB0771
Carg07436	CsaV3_3G021700	Cucumber (Chinese Long) v3	carcucB0801
Carg07436	Cla97C05G093090	Watermelon (97103) v2	carwmbB0795

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07436	Wax gourd	carwgoB0895
Carg07436	Silver-seed gourd	carcarB213
Carg07436	Cucumber (Gy14) v2	carcgybB0758
Carg07436	Cucumber (Gy14) v1	carcgyB0856
Carg07436	Cucurbita maxima (Rimu)	carcmaB1057
Carg07436	Cucurbita moschata (Rifu)	carcmoB1031
Carg07436	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07436	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07436	Wild cucumber (PI 183967)	carcpiB0799
Carg07436	Cucumber (Chinese Long) v2	carcuB0781
Carg07436	Cucumber (Chinese Long) v3	carcucB0802
Carg07436	Bottle gourd (USVL1VR-Ls)	carlsiB700
Carg07436	Watermelon (97103) v1	carwmB0760