Carg07424 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCTTGGAAGGGGTTTTTATTGAACCTTCTTCAACCCCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGCTTCTTCTTCTTCCTCCTCCTCCTCCTCTAATTCTTCTTCAATTAAAACCCTCACCCATGGATTCCCTCAAACAAATTTTGATCTTTTGAGTAATTCCGATAACCCTCGTGCCCACACCGACCTCTCTCTCGGTACCAACAACGATCTTCCCGGCCGTGCACCGCTACCCCCGCCGCTCCACCATCTTCGCGGGGTTTCGGGGTTCGACGTATCGGACCGGTTGCGACCATCAAAGGGATTCCCGTGTACCACAACCGCCCGTTTCCATTTTTGGCTGTAGATCAGAAAGATCATCGTTATCATCATCATCATCCTCATCAGAACCACCATCAATTTTCATCCTTCTACCCGAATTACCCGAACCCGAATGGAGTTCTTCAAACGGGTTATCGAAATTCCGCTGCGAGGTTCAACAATGGGACGGTTTCGGTTGAAGGAATTAAATCCTTGCATAGTAATAGTAATGCAGCTTCTTCTTCTTCTGATGTTTGTTCTCATGGAATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTCCTAAAAGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGTTTCGTTCACGCCGTCGAACATCTCGGCGGCCACGAAAGTAAACAACAAACCCTTTTTCTCTTCCGATCTCTGTCTCTAATATTCGAGTACTTTTTTATTTTGATTCATTCCTATCGTTTAATTTCACCATTTCGATCCATCGTAAGAGGGTATGATTAAGAACATCGTCGTAAAAACACCCTAACATTAGAAACCAAAACATCCAAACATTAATTTATCAGAAAAATGTGTTTTTTTTTTTATTTTTTTGTAGGAGCAACTCCAAAGTCAGTTCTTGAGCTGATGGATGTTAAGGATCTAACATTGGCTCATGTCAAGAGCCATTTACAGGTAATCATCTTTAAAACCCTTCATTGTAATCACAAATCTTGCCTTTTTTTTCTCTCTCATATTGTCAGTGATTCAATGAATGAATGAATGAATGAGTATTGTACTTTAATGGATGGCTATCAATCAGTGTGAGCCCTTTTTTCTCTTCCTTTTCAGAAACACAAATTCATATCTTTTTCTGATTTAAAACAGATTGAAAGAGAAAAGAAAGAGAAAAAGTTGTCATGATTACAAAATAATATGAACTTTGATCCAAAAATGAATGACTCCTCGTGACTAATGATGAAATCTAGACAGTCCCAGAGAGCCCACAACTCAGAGAAGAGAATTAAAAAATTAATTTAAATGAAATGAGTTCCCAATGACTTGTTTTTTTTCTTTATCAGATGTATCGGACTGTTAAGACCACTGACAAGCCAGCAGCTTCCTCAGGTAATTCGTATTGTTTGGCTCTTCTTTTGTTTCTCTTTTTTCTTGTTCTAATTTGTTTTCGAAACCCGAGTTAGGGCGTATAGGGTGTGAGTTGGACTTGAGGGCGGTTCGGCTTTCTAAGCTCGAGTGAAAGTCGAGATGTGAATCGTAGCTCGAGCGTTGAATCAATAGACTTGAATCGTAGTTATGGGTGTCGATATGATTAAATTTTTTTTGTGGGTCATCAACGAAAGTTTTTTTTTTTTGTAATAGCTAATTTGTGATTTGACATGGACTTAAGGGAGGTTCGGCTTTCGAAGATTGAGAGAAAGTTGAACCTAAAACAAGCTGGGAATCATAGCTCGAGCGGAGAATCAACAAATTTGAATCGTAGTTCCCGGATGTTGATGTGATTAAATTTATCGTGGGTTATCGAGTAAAGTTTTTATTATAGCTAATTCGTGATTTGACATTAAAAGTTGGACTCAAGGGAGGTTTGGCTTTCGAAGCTCGAGCGAAAGCTGAACCTAGAACGAGCTGGGAATTGTAGCTCGAGTGGAGAATTAACAAACTTGAATTGTAGTTCACGGGTGTTGATGTGATTAAATTTATCGTGGGTTATCGAGTAAAGTTTTTATTATAGCTAATTCGTGATTTGACATTAAAAGTTGGACTCAAGGGAGGTTTGGCTTTCGAAACTCGAGCGAAAGCTGAACCTAGAACGAGCTGAGAATTGTAGCTCGAGTGGAGAATCAACAAACTTGAATCATAGTTCACGGGTGTTGATGTGATTAAATTTATCGTGAGTTATCGACTAAAGTTTTTTATTATAGTTAATTCGTGATTTGACACTAAAAGTTGGACTTAAGGGAGGTTTGGCTTTCGAAGCTCGAGCAGAGAATCAACCGTCTTGAATTATAGCTCTCGAGTGTCGATATGATTAAATTTATCGTGGGTCGTCGAAGTTTTTTTTGTTCGAACTTTGATTATGATGTTATTTTATTTTACAAAATTTCAAATTCACGAGTTTTGAGAAAAATTAAAGTTATGGTATATTATTGACTTTAATGTCAGACTCGTGATTTAATATAAAGTAAATATCGATTTGATATCTTGTTCTGATTAATGATTTAATTCATTATTTGATTAATGAAGGCCAATCAGACGGTTCGGGTGACGATGACGTATCTCCTACAATATGCACGGGCCGAGGGGACAATGCCCCAAGGCAATTTTCCGATCAAAGAGCTCCATCGGAGCGGTCCAGCCAGCCACTGCCGGATTTGGAATTTGGCTCCTCCACTCTTTGGTCTAATTCTTCAAGGTTAGTTCGTTTTTCCATTTTGCGTTTTTAAAGAATTTTAATACATCGATTTATAAAAATTAAGAACATGTTCGGGAATGATTTCGCTCGATTTTGCAGAGATGTATGGCCACAAACAAACTCTAATGAAACGGATATGATTAGATCAAATTCATCTACCCAACCCATGCATCAAATCGAGGTACCATTTACAATTAAATTTACATTATGATTAGTTCGGTCGAGTTTAAGCACTTTCAATGACGCACGAGTGAATATACAGATCTAAGAGTCAGTACAGAATCGTATATTCAAACTCTCGCACGAATGTCGGTTTTCACGTAAATATCGAAACCCTAAAACTAGGATCAATATAGGGATTTAGTTGACTTTCGTAGTGTCGTGTTCTTCTCGATTAATAGAATGACCTACTTATGGATTCTCGTTCATGAACTCGAACGTTTAAAGTCTAGTGATTGATTCAAAATCGGGTTCGGGGCACGGATTAAGAAATTTGTGTGACAGGAATGTGATTCAGGTGCAATGAAGAGATACAATAATTCAGAGTGCAAGAAGCCAAGCTTGGAATTCAGGTTAGGCAGAGCAGAATGGGATCTCAAAGAAGACTAACAGTTTAATTTCGTTTTTTTTTTTTTT ATGCCCTTGGAAGGGGTTTTTATTGAACCTTCTTCAACCCCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGCTTCTTCTTCTTCCTCCTCCTCCTCCTCTAATTCTTCTTCAATTAAAACCCTCACCCATGGATTCCCTCAAACAAATTTTGATCTTTTGAGTAATTCCGATAACCCTCGTGCCCACACCGACCTCTCTCTCGGTACCAACAACGATCTTCCCGGCCGTGCACCGCTACCCCCGCCGCTCCACCATCTTCGCGGGGTTTCGGGGTTCGACGTATCGGACCGGTTGCGACCATCAAAGGGATTCCCGTGTACCACAACCGCCCATCAGAAAGATCATCGTTATCATCATCATCATCCTCATCAGAACCACCATCAATTTTCATCCTTCTACCCGAATTACCCGAACCCGAATGGAGTTCTTCAAACGGGTTATCGAAATTCCGCTGCGAGGTTCAACAATGGGACGGTTTCGGTTGAAGGAATTAAATCCTTGCATAGTAATAGTAATGCAGCTTCTTCTTCTTCTGATGTTTGTTCTCATGGAATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTCCTAAAAGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGTTTCGTTCACGCCGTCGAACATCTCGGCGGCCACGAAAGTAAACAACAAACCCTTTTTCTCTTCCGATCTCTGTCTCTAATATTCGAGTACTTTTTTATTTTGATTCATTCCTATCGAGCAACTCCAAAGTCAGTTCTTGAGCTGATGGATGTTAAGGATCTAACATTGGCTCATGTCAAGAGCCATTTACAGATGTATCGGACTGTTAAGACCACTGACAAGCCAGCAGCTTCCTCAGGCCAATCAGACGGTTCGGGTGACGATGACGTATCTCCTACAATATGCACGGGCCGAGGGGACAATGCCCCAAGGCAATTTTCCGATCAAAGAGCTCCATCGGAGCGGTCCAGCCAGCCACTGCCGGATTTGGAATTTGGCTCCTCCACTCTTTGGTCTAATTCTTCAAGAGATGTATGGCCACAAACAAACTCTAATGAAACGGATATGATTAGATCAAATTCATCTACCCAACCCATGCATCAAATCGAGGAATGTGATTCAGGTGCAATGAAGAGATACAATAATTCAGAGTGCAAGAAGCCAAGCTTGGAATTCAGGTTAGGCAGAGCAGAATGGGATCTCAAAGAAGACTAACAGTTTAATTTCGTTTTTTTTTTTTTT ATGCCCTTGGAAGGGGTTTTTATTGAACCTTCTTCAACCCCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGCTTCTTCTTCTTCCTCCTCCTCCTCCTCTAATTCTTCTTCAATTAAAACCCTCACCCATGGATTCCCTCAAACAAATTTTGATCTTTTGAGTAATTCCGATAACCCTCGTGCCCACACCGACCTCTCTCTCGGTACCAACAACGATCTTCCCGGCCGTGCACCGCTACCCCCGCCGCTCCACCATCTTCGCGGGGTTTCGGGGTTCGACGTATCGGACCGGTTGCGACCATCAAAGGGATTCCCGTGTACCACAACCGCCCATCAGAAAGATCATCGTTATCATCATCATCATCCTCATCAGAACCACCATCAATTTTCATCCTTCTACCCGAATTACCCGAACCCGAATGGAGTTCTTCAAACGGGTTATCGAAATTCCGCTGCGAGGTTCAACAATGGGACGGTTTCGGTTGAAGGAATTAAATCCTTGCATAGTAATAGTAATGCAGCTTCTTCTTCTTCTGATGTTTGTTCTCATGGAATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTCCTAAAAGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGTTTCGTTCACGCCGTCGAACATCTCGGCGGCCACGAAAGTAAACAACAAACCCTTTTTCTCTTCCGATCTCTGTCTCTAATATTCGAGTACTTTTTTATTTTGATTCATTCCTATCGAGCAACTCCAAAGTCAGTTCTTGAGCTGATGGATGTTAAGGATCTAACATTGGCTCATGTCAAGAGCCATTTACAGATGTATCGGACTGTTAAGACCACTGACAAGCCAGCAGCTTCCTCAGGCCAATCAGACGGTTCGGGTGACGATGACGTATCTCCTACAATATGCACGGGCCGAGGGGACAATGCCCCAAGGCAATTTTCCGATCAAAGAGCTCCATCGGAGCGGTCCAGCCAGCCACTGCCGGATTTGGAATTTGGCTCCTCCACTCTTTGGTCTAATTCTTCAAGAGATGTATGGCCACAAACAAACTCTAATGAAACGGATATGATTAGATCAAATTCATCTACCCAACCCATGCATCAAATCGAGGAATGTGATTCAGGTGCAATGAAGAGATACAATAATTCAGAGTGCAAGAAGCCAAGCTTGGAATTCAGGTTAGGCAGAGCAGAATGGGATCTCAAAGAAGACTAA MPLEGVFIEPSSTPLPDLSLQISPPNASSSSSSSSSNSSSIKTLTHGFPQTNFDLLSNSDNPRAHTDLSLGTNNDLPGRAPLPPPLHHLRGVSGFDVSDRLRPSKGFPCTTTAHQKDHRYHHHHPHQNHHQFSSFYPNYPNPNGVLQTGYRNSAARFNNGTVSVEGIKSLHSNSNAASSSSDVCSHGMMMRSRFLQKLPPKRSMRAPRMRWTTSLHARFVHAVEHLGGHESKQQTLFLFRSLSLIFEYFFILIHSYRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGDDDVSPTICTGRGDNAPRQFSDQRAPSERSSQPLPDLEFGSSTLWSNSSRDVWPQTNSNETDMIRSNSSTQPMHQIEECDSGAMKRYNNSECKKPSLEFRLGRAEWDLKED
BLAST of Carg07424 vs. NCBI nr
Match: XP_023523318.1 (transcription repressor KAN1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 619.4 bits (1596), Expect = 8.9e-174 Identity = 358/426 (84.04%), Postives = 360/426 (84.51%), Query Frame = 0
BLAST of Carg07424 vs. NCBI nr
Match: XP_022948308.1 (transcription repressor KAN1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173 Identity = 372/425 (87.53%), Postives = 374/425 (88.00%), Query Frame = 0
BLAST of Carg07424 vs. NCBI nr
Match: XP_022998248.1 (transcription repressor KAN1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 605.5 bits (1560), Expect = 1.3e-169 Identity = 368/428 (85.98%), Postives = 370/428 (86.45%), Query Frame = 0
BLAST of Carg07424 vs. NCBI nr
Match: XP_022948309.1 (transcription repressor KAN1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 551.6 bits (1420), Expect = 2.3e-153 Identity = 339/391 (86.70%), Postives = 341/391 (87.21%), Query Frame = 0
BLAST of Carg07424 vs. NCBI nr
Match: XP_023523319.1 (transcription repressor KAN1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 547.7 bits (1410), Expect = 3.3e-152 Identity = 324/392 (82.65%), Postives = 326/392 (83.16%), Query Frame = 0
BLAST of Carg07424 vs. TAIR10
Match: AT5G16560.1 (Homeodomain-like superfamily protein) HSP 1 Score: 181.8 bits (460), Expect = 8.6e-46 Identity = 119/236 (50.42%), Postives = 143/236 (60.59%), Query Frame = 0
BLAST of Carg07424 vs. TAIR10
Match: AT1G32240.1 (Homeodomain-like superfamily protein) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32 Identity = 101/228 (44.30%), Postives = 121/228 (53.07%), Query Frame = 0
BLAST of Carg07424 vs. TAIR10
Match: AT4G17695.1 (Homeodomain-like superfamily protein) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-26 Identity = 71/131 (54.20%), Postives = 80/131 (61.07%), Query Frame = 0
BLAST of Carg07424 vs. TAIR10
Match: AT5G42630.1 (Homeodomain-like superfamily protein) HSP 1 Score: 105.9 bits (263), Expect = 6.0e-23 Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = 0
BLAST of Carg07424 vs. TAIR10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-13 Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Carg07424 vs. Swiss-Prot
Match: sp|Q93WJ9|KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.6e-44 Identity = 119/236 (50.42%), Postives = 143/236 (60.59%), Query Frame = 0
BLAST of Carg07424 vs. Swiss-Prot
Match: sp|Q9C616|KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.0e-31 Identity = 101/228 (44.30%), Postives = 121/228 (53.07%), Query Frame = 0
BLAST of Carg07424 vs. Swiss-Prot
Match: sp|Q0J235|ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 137.5 bits (345), Expect = 3.4e-31 Identity = 98/246 (39.84%), Postives = 111/246 (45.12%), Query Frame = 0
BLAST of Carg07424 vs. Swiss-Prot
Match: sp|Q941I2|KAN3_ARATH (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.6e-25 Identity = 71/131 (54.20%), Postives = 80/131 (61.07%), Query Frame = 0
BLAST of Carg07424 vs. Swiss-Prot
Match: sp|Q9FJV5|KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.1e-21 Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = 0
BLAST of Carg07424 vs. TrEMBL
Match: tr|A0A0A0LBR3|A0A0A0LBR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G194380 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 9.7e-92 Identity = 274/473 (57.93%), Postives = 293/473 (61.95%), Query Frame = 0
BLAST of Carg07424 vs. TrEMBL
Match: tr|A0A1S3C2S7|A0A1S3C2S7_CUCME (transcription repressor KAN1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496208 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.1e-79 Identity = 170/229 (74.24%), Postives = 183/229 (79.91%), Query Frame = 0
BLAST of Carg07424 vs. TrEMBL
Match: tr|A0A1S3C3Y9|A0A1S3C3Y9_CUCME (transcription repressor KAN1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496208 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 5.1e-77 Identity = 165/224 (73.66%), Postives = 178/224 (79.46%), Query Frame = 0
BLAST of Carg07424 vs. TrEMBL
Match: tr|A0A2I4EAW6|A0A2I4EAW6_9ROSI (transcription repressor KAN1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108987921 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.9e-64 Identity = 194/479 (40.50%), Postives = 231/479 (48.23%), Query Frame = 0
BLAST of Carg07424 vs. TrEMBL
Match: tr|A0A2I4EAV4|A0A2I4EAV4_9ROSI (transcription repressor KAN1-like isoform X3 OS=Juglans regia OX=51240 GN=LOC108987921 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.9e-63 Identity = 194/474 (40.93%), Postives = 232/474 (48.95%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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