Carg07389 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07389
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	MYB transcription factor
Location	Cucurbita_argyrosperma_scaffold_019 : 512919 .. 514495 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGACGGCCATGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAGGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGGTTACTTCCCACCTACATTTTTCCGATAAAACAAATTATTCAACGAGACCGCTACCCTTTTCGTCTTCTTTTACTAATCTCTTTTTACGAGCCATTGAACTTACCTTGCATCCGTACATCTAATGGTTAAAAAAGATTAGCTATTTTTATAATCGAGAGTGACCCGTTATCGAAATTTTTATTTTTAGGGCTTCTTCGATGTGGGAAAAGTTGCCGACTTCGATGGATCAACTATTTAAGGTGCGATTTGGTGCGAGGGAACATTACGACCGACGAAGAGAATCTTATTATTAAACTACATTCTACCTTAGGAAACAGGTAACTCAAATTAATTTCACTCTTAATTTTAATTATCATAAAGTTTTATTTTTAATTTTTTAATATTTGAAATATATTTCAAAATGAAATTTATAATAGGTAATAAATTTAATGCAAAAATACATCCTTTTTAAGTCATAATTTTTTTAATAATTTTAAATATATTCTCCCAATGCAGTTCACGAGCAAAGAAGAGAAAAAAAATAATAAAATAAAGTAAATAATAATAATAAATTATTATATTATTATTATTTTGGCTTTTTGTAGATTAAAGTCAAGCATGTCAGACAGGCTAGAATGACAACATGAAAGGAATATGAAAATAGAGGGAATAATTTATTCGGATTTTCCTTTATTTTTAATTTTCTATAATTTTGAGAAAATAATTTGTAGGATTTTATTAATTTTAATAAAAATTCATTTTATAATATACGAAAAAAAAAAGAAAAAAAAAAAAGGGAAATATTGTCGTTTTCTAATTATAATTATGAATATTTTAATTCAAAATGTTCTCAGGTGGTCTTTAATCGCGAGCCACTTGCCAGGCAGAACAGACAACGAGATTAAAAATTACTGGAATTCTCACCTGAGCCGTCAAATTCACACGATCCGGCGCCGGAGCGGCAACGACGATGGGTCGGTAATTGTCGACGTGGCACGGCTGAGCCTCCCGCCGCGGCGGAAGGGCAGCCGTGGGCGGCGTAGCAAGGAAGCGGAGACGGTGGCGAGAGAAAAAACTGTTTATGGGGCTGTGGATGATCCAGCGGAGGAAAGAGTTAGTTCCAACGACAAAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTCGATAAGGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGACAACGACAACGACGACGACGACGACGACGACGGAAATAAAGTCACCGCCGCTGCCGGTGGCGCTGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTTCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGGTGGGGAGGAATGGGAGGCCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAA

mRNA sequence

ATGGGGAGACGGCCATGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAGGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGCGGAGGAAAGAGTTAGTTCCAACGACAAAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTCGATAAGGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGACAACGACAACGACGACGACGACGACGACGACGGAAATAAAGTCACCGCCGCTGCCGGTGGCGCTGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTTCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGGTGGGGAGGAATGGGAGGCCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAA

Coding sequence (CDS)

ATGGGGAGACGGCCATGCTGTGAGAAAGTTGGCCTGAAAAAAGGGAGGTGGACGGCGGAGGAAGATGACCGGTTGAAAAAGTACATTCTTGCTAATGGTGAAGGCTCTTGGAGATCCCTCCCCAAAAATGCAGCGGAGGAAAGAGTTAGTTCCAACGACAAAATTATTAGCAAAACGACAGATGTTGGTGGGTCTGCGACGTTGAGTTTCGATAAGGACGACATGTCGTTGGACTTGGATGCCTTTTTGGATTGGGACAATGACAACGACAACGACGACGACGACGACGACGACGGAAATAAAGTCACCGCCGCTGCCGGTGGCGCTGAGGTGGAGACCGGCGGTGAGTGTAGTTCGATTAGTTGTTCGTTTCGTCTGGACAGTCCTTGGAATTGGGAAAGCTTTGTCGGTGGGGAGGAATGGGAGGCCGGAGAGGATCTCCCCGCCGCCGCCGTGGTGGAATCCGACGCTGTGATTTCTTGGCTCTTATCTTAA

Protein sequence

MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKIISKTTDVGGSATLSFDKDDMSLDLDAFLDWDNDNDNDDDDDDDGNKVTAAAGGAEVETGGECSSISCSFRLDSPWNWESFVGGEEWEAGEDLPAAAVVESDAVISWLLS

Homology

[Close]

BLAST of Carg07389 vs. NCBI nr
Match: XP_022949137.1 (myb-related protein P-like [Cucurbita moschata])

HSP 1 Score: 203.8 bits (517), Expect = 4.6e-49
Identity = 158/290 (54.48%), Postives = 158/290 (54.48%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA---------------- 60
           MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120

Query: 121 --------------------------------------------------AEERVSSNDK 165
                                                             AEERVSSNDK
Sbjct: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAETVAREKTVYGAVDDPAEERVSSNDK 180

[Close]

BLAST of Carg07389 vs. NCBI nr
Match: XP_023525604.1 (myb-related protein 308-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 1.1e-45
Identity = 152/300 (50.67%), Postives = 154/300 (51.33%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA---------------- 60
           MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120

Query: 121 ------------------------------------------------------------ 165
                                                                       
Sbjct: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKXXXXXXXXXXXXXXXXREKTVYGAVDDP 180

[Close]

BLAST of Carg07389 vs. NCBI nr
Match: XP_022998110.1 (myb-related protein P isoform X2 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 4.1e-45
Identity = 152/290 (52.41%), Postives = 152/290 (52.41%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA---------------- 60
           MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120

Query: 121 --------------------------------------------------AEERVSSNDK 165
                                                             AEERVSSND 
Sbjct: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKEAETAAREKTVYGAVDDPAEERVSSNDG 180

[Close]

BLAST of Carg07389 vs. NCBI nr
Match: XP_022998109.1 (myb-related protein P isoform X1 [Cucurbita maxima])

HSP 1 Score: 186.8 bits (473), Expect = 5.8e-44
Identity = 152/300 (50.67%), Postives = 152/300 (50.67%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA---------------- 60
           MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRCDLVRGNITTDEENLIIKLHSTLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTIR 120

Query: 121 ------------------------------------------------------------ 165
                                                                       
Sbjct: 121 RRSGNDDGSVIVDVARLSLPPRRKGSRGRRSKXXXXXXXXXXXXXXXXREKTVYGAVDDP 180

[Close]

BLAST of Carg07389 vs. NCBI nr
Match: XP_022984058.1 (myb-related protein P-like [Cucurbita maxima])

HSP 1 Score: 110.5 bits (275), Expect = 5.3e-21
Identity = 94/319 (29.47%), Postives = 105/319 (32.92%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA---------------- 60
           MGRRPCCEKVGLKKGRWT EEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCEKVGLKKGRWTTEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 61  LRSDLKRGNITPQEEDVIIKLHASLGNRWSLIASHLTGRTDNEIKNYWNSHLSRQIQTFR 120

Query: 121 ------------------------------------------------------------ 165
                                                                       
Sbjct: 121 RRNDDVPVIVDEAKLSLLQRRKGGRGRRSKAEVEAEVGRKILPMPDLERESSVCGAVDDT 180

[Close]

BLAST of Carg07389 vs. TAIR10
Match: AT3G62610.1 (myb domain protein 11)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          MGR PCCEKVG+KKGRWTAEED  L  YI +NGEGSWRSLPKNA  +R   + ++
Sbjct: 1  MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. TAIR10
Match: AT2G47460.1 (myb domain protein 12)

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-16
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          MGR PCCEKVG+K+GRWTAEED  L  YI +NGEGSWRSLPKNA  +R   + ++
Sbjct: 1  MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. TAIR10
Match: AT5G49330.1 (myb domain protein 111)

HSP 1 Score: 81.6 bits (200), Expect = 4.8e-16
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEK+GLK+GRWTAEED+ L KYI  NGEGSWRSLPK A
Sbjct: 1  MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKA 44

[Close]

BLAST of Carg07389 vs. TAIR10
Match: AT4G21440.1 (MYB-like 102)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          M R PCCEK GLKKG WT+EED +L  YI  +G G+WR+LPKNA  +R   + ++
Sbjct: 1  MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. TAIR10
Match: AT4G28110.1 (myb domain protein 41)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          MGR PCC+K G+KKG WTAEED +L  YI  +G G+WR+LPKNA   R   + ++
Sbjct: 1  MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. Swiss-Prot
Match: sp|Q9LZK4|MYB11_ARATH (Transcription factor MYB11 OS=Arabidopsis thaliana OX=3702 GN=MYB11 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          MGR PCCEKVG+KKGRWTAEED  L  YI +NGEGSWRSLPKNA  +R   + ++
Sbjct: 1  MGRAPCCEKVGIKKGRWTAEEDRTLSDYIQSNGEGSWRSLPKNAGLKRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. Swiss-Prot
Match: sp|O22264|MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana OX=3702 GN=MYB12 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-15
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAAEERVSSNDKI 56
          MGR PCCEKVG+K+GRWTAEED  L  YI +NGEGSWRSLPKNA  +R   + ++
Sbjct: 1  MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRL 55

[Close]

BLAST of Carg07389 vs. Swiss-Prot
Match: sp|Q9FJ07|MY111_ARATH (Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.7e-15
Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEK+GLK+GRWTAEED+ L KYI  NGEGSWRSLPK A
Sbjct: 1  MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKA 44

[Close]

BLAST of Carg07389 vs. Swiss-Prot
Match: sp|P27898|MYBP_MAIZE (Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-14
Identity = 35/44 (79.55%), Postives = 37/44 (84.09%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEKVGLK+GRWTAEED  L  YI  +GEGSWRSLPKNA
Sbjct: 1  MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNA 44

[Close]

BLAST of Carg07389 vs. Swiss-Prot
Match: sp|P20026|MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare OX=4513 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-11
Identity = 31/44 (70.45%), Postives = 32/44 (72.73%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEK    KG WT EEDDRL  YI A+GEG WRSLPK A
Sbjct: 1  MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAA 44

[Close]

BLAST of Carg07389 vs. TrEMBL
Match: tr|A0A1S3BYE2|A0A1S3BYE2_CUCME (myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103494741 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-18
Identity = 92/323 (28.48%), Postives = 102/323 (31.58%), Query Frame = 0


Query: 1   MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAA--------------- 60
           MGRRPCC+KVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA                
Sbjct: 1   MGRRPCCDKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY 60

Query: 61  -----------------------------------------------------------E 120
                                                                       
Sbjct: 61  LRADLKRGNITSEEEDVIIKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIQTIR 120

Query: 121 ERVSSNDKIISKTT---------------------------------------------- 165
            R    D +I                                                  
Sbjct: 121 RRNDDGDSVIVDVARISLPPRRKGGXXXXXXXXXXXXXXXXXXXXXXREIPSPASGVCGR 180

[Close]

BLAST of Carg07389 vs. TrEMBL
Match: tr|A0A0A0KVA3|A0A0A0KVA3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003095 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGRRPCC+KVGLKKGRWT EEDDRLKKYILANGEGSWRSLPKNA
Sbjct: 1  MGRRPCCDKVGLKKGRWTEEEDDRLKKYILANGEGSWRSLPKNA 44

[Close]

BLAST of Carg07389 vs. TrEMBL
Match: tr|A0A067JYL5|A0A067JYL5_JATCU (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_18963 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEKVGLKKGRWTAEED+ L KYILANGEGSWRSLPKNA
Sbjct: 1  MGRAPCCEKVGLKKGRWTAEEDELLTKYILANGEGSWRSLPKNA 44

[Close]

BLAST of Carg07389 vs. TrEMBL
Match: tr|B9RZL8|B9RZL8_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_0999660 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.4e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEKVGLKKGRWTAEED+ L KYILANGEGSWRSLPKNA
Sbjct: 1  MGRAPCCEKVGLKKGRWTAEEDEILTKYILANGEGSWRSLPKNA 44

[Close]

BLAST of Carg07389 vs. TrEMBL
Match: tr|A0A2C9W940|A0A2C9W940_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G201700 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.4e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 0


Query: 1  MGRRPCCEKVGLKKGRWTAEEDDRLKKYILANGEGSWRSLPKNA 45
          MGR PCCEKVGLKKGRWTAEED+ L KYILANGEGSWRSLPKNA
Sbjct: 1  MGRAPCCEKVGLKKGRWTAEEDEILTKYILANGEGSWRSLPKNA 44

The following BLAST results are available for this feature:

BLAST of Carg07389 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949137.1	4.6e-49	54.48	myb-related protein P-like [Cucurbita moschata]	[more]
XP_023525604.1	1.1e-45	50.67	myb-related protein 308-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998110.1	4.1e-45	52.41	myb-related protein P isoform X2 [Cucurbita maxima]	[more]
XP_022998109.1	5.8e-44	50.67	myb-related protein P isoform X1 [Cucurbita maxima]	[more]
XP_022984058.1	5.3e-21	29.47	myb-related protein P-like [Cucurbita maxima]	[more]

BLAST of Carg07389 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62610.1	1.7e-16	67.27	myb domain protein 11	[more]
AT2G47460.1	2.8e-16	65.45	myb domain protein 12	[more]
AT5G49330.1	4.8e-16	79.55	myb domain protein 111	[more]
AT4G21440.1	3.2e-12	54.55	MYB-like 102	[more]
AT4G28110.1	3.2e-12	54.55	myb domain protein 41	[more]

BLAST of Carg07389 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZK4\|MYB11_ARATH	3.0e-15	67.27	Transcription factor MYB11 OS=Arabidopsis thaliana OX=3702 GN=MYB11 PE=1 SV=1	[more]
sp\|O22264\|MYB12_ARATH	5.1e-15	65.45	Transcription factor MYB12 OS=Arabidopsis thaliana OX=3702 GN=MYB12 PE=1 SV=1	[more]
sp\|Q9FJ07\|MY111_ARATH	8.7e-15	79.55	Transcription factor MYB111 OS=Arabidopsis thaliana OX=3702 GN=MYB111 PE=1 SV=1	[more]
sp\|P27898\|MYBP_MAIZE	2.5e-14	79.55	Myb-related protein P OS=Zea mays OX=4577 GN=P PE=2 SV=1	[more]
sp\|P20026\|MYB1_HORVU	3.4e-11	70.45	Myb-related protein Hv1 OS=Hordeum vulgare OX=4513 GN=MYB1 PE=2 SV=1	[more]

BLAST of Carg07389 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYE2\|A0A1S3BYE2_CUCME	1.3e-18	28.48	myb-related protein 308-like OS=Cucumis melo OX=3656 GN=LOC103494741 PE=4 SV=1	[more]
tr\|A0A0A0KVA3\|A0A0A0KVA3_CUCSA	1.2e-16	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003095 PE=4 SV=1	[more]
tr\|A0A067JYL5\|A0A067JYL5_JATCU	6.4e-15	90.91	MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_18963 PE=4 SV=1	[more]
tr\|B9RZL8\|B9RZL8_RICCO	8.4e-15	90.91	R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_0999...	[more]
tr\|A0A2C9W940\|A0A2C9W940_MANES	8.4e-15	90.91	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G201700 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07389-RA	Carg07389-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 8..55 e-value: 2.2E-7 score: 32.5
None	No IPR available	PANTHER	PTHR10641:SF595	SUBFAMILY NOT NAMED	coord: 1..44
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..44
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..42 e-value: 1.4E-5 score: 25.1
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 9..48 score: 6.818
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 8..43

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07389	Csa4G003090	Cucumber (Chinese Long) v2	carcuB0782
Carg07389	MELO3C017925	Melon (DHL92) v3.5.1	carmeB0758
Carg07389	Cp4.1LG02g16350	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07389	Cp4.1LG03g05230	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07389	CsGy4G001040	Cucumber (Gy14) v2	carcgybB0759
Carg07389	Cla97C10G194150	Watermelon (97103) v2	carwmbB0794
Carg07389	Bhi11G001051	Wax gourd	carwgoB0894

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07389	Carg11153	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07389	Silver-seed gourd	carcarB132
Carg07389	Cucumber (Gy14) v1	carcgyB0855
Carg07389	Cucumber (Gy14) v1	carcgyB0863
Carg07389	Cucurbita maxima (Rimu)	carcmaB1057
Carg07389	Cucurbita maxima (Rimu)	carcmaB1058
Carg07389	Cucurbita maxima (Rimu)	carcmaB1059
Carg07389	Cucurbita maxima (Rimu)	carcmaB1060
Carg07389	Cucurbita moschata (Rifu)	carcmoB1031
Carg07389	Cucurbita moschata (Rifu)	carcmoB1032
Carg07389	Cucurbita moschata (Rifu)	carcmoB1033
Carg07389	Cucurbita moschata (Rifu)	carcmoB1034
Carg07389	Cucurbita pepo (Zucchini)	carcpeB1070
Carg07389	Cucurbita pepo (Zucchini)	carcpeB1071
Carg07389	Wild cucumber (PI 183967)	carcpiB0800
Carg07389	Wild cucumber (PI 183967)	carcpiB0801
Carg07389	Cucumber (Chinese Long) v2	carcuB0783
Carg07389	Cucumber (Chinese Long) v3	carcucB0803
Carg07389	Cucumber (Chinese Long) v3	carcucB0804
Carg07389	Bottle gourd (USVL1VR-Ls)	carlsiB698
Carg07389	Bottle gourd (USVL1VR-Ls)	carlsiB699
Carg07389	Melon (DHL92) v3.5.1	carmeB0752
Carg07389	Melon (DHL92) v3.6.1	carmedB0767
Carg07389	Melon (DHL92) v3.6.1	carmedB0773
Carg07389	Watermelon (Charleston Gray)	carwcgB0735
Carg07389	Watermelon (Charleston Gray)	carwcgB0738
Carg07389	Watermelon (97103) v1	carwmB0757
Carg07389	Watermelon (97103) v1	carwmB0759
Carg07389	Watermelon (97103) v2	carwmbB0797