Carg07242 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07242
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Non-structural 2
Location	Cucurbita_argyrosperma_scaffold_017 : 864400 .. 868428 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCGCCGGAATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATTGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTCAATATCATCAACGATGTCTCCGCCTTCGTCTTGTACATGCACCAACAAGTCCCTTCGTAAGTTACTCCTTCCAATTCCAACGTATTTTCCGTTTGTTAACTTCGAAACTGCTGGAAACGGGGGAAAAATCCATTCAGGTACGATTCCCGATGGATAATGTGTGATCGATGTTACGTTCAGTTCAAGCTTGGCGCTTATGACTATGATCGATACTTTTGGTTTGTTAAGTTTTGAGTCGATTGTAGTTGCTGTCTGATTTATGCACATGGTTGGACTTGATTACCTCAGTCACTCTATTTGAAATTGTGCCTTGTGAGTTTGGGGGAGGAAAATTAAGGATTCTAGGAGCAATGAGATTTGTTCGATTCGAAATTTACTGAGGCTTTCGCTCTGTAAGATTTGGGAAATTTAAATGCTCATTTTTGATATGTTGAAATTTTCAACCGGTATCTATTCTAAATGTCATATAATATTAGTGATTCGTTTTAGGATCTGTAAATTGCTGAGATGATCGTTTAAAAATGTGTTTCGGATGGAATCGTGAATAGAAAAATGCTAACGTGTCCTTCAGGTCGAGGTTCAAATCTCGGTGCCCCAAAGATGATGAATAGAAGAATGAATGTTGTCGGCTAACAGAACATTTATTTTGCCTAACATTGCTTATTTTGTTCTTCTTTATATCTGTTTTGTGTCTCTTCTATGATTTTTGCATGTGTCGTATGGCCTGTAATGCAATGTTTTTTGATTGTTTCTTTCCTAGTATTACAAAAAGCCCTTGCAAGAACACCTTTATAAAGTAAATATTGCGGATGATATGTTCTTGAGAAAGAACTCTTGGAGAAAGCTTTAAAAGAATTAAAATATTTTCTTTTGTATTGAAAATACTGTGTCAGTGACTTTATATAGAGGCCAACTGTTAATTACAAGACTGATTAGTTCAAGCATAAGTAACTACAACAACAAACCAGATGAACAGAAGCTAAATAACTAAACAGAAACAGACCAACGGAACAGAATATAATCGCTACTAATGATTCTCCTCAACAGTGGAGAAAAGGGCAAACCATTAAAGAAACGAACATACGTAGCTTTTGTTATTTTGAGACTGAAAATCAGTATGCGAGAACACCTTTTAGTCTTTGAAATAAAATGTAATCTACATTTTAAATGTACATGTACACAGAGTTAAAAACTAATCTTTTCAGTTTCAGTAGACATTGGTTTTCTGGTTCAATCTTCGGTAGATCACTTATATCTAGGAAGCCAAAAGTTCATAAATTTTATACATCCCCTACTCTGGCTCCTCCATTTTGCTATAAACTAGAATTATATGATTTACAAGGATTTAACATTGTATGAGATATATATTTGGTATGCTTGTACCATAAGCACTGATGTCTGGTGGCTTATGTGCAGAATCCTACAGGACATGAGCATTGAATTTGACACTTTGCATGAAGAATACAAAGAGCTGGTATGTTAGCTGAGAAAGGGTAGTTTCCTTTACACTTTTTTGCATCAATCTGAGGATCATAAGAACGGTTATTTTTAGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAATCGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTATTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGTGCGTTTGAATTGTAGTACTTTTCCTAAATTTTTTCAGCATTTGATTCAAATTTTGTTGTTCATAGCAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCGTATCCAGGTACACAGTCGTGCACGTTAAAGCAAATTGATCAAGTTGGGAGAAGAATTCTCATCCTTGAAATTTTCTCATTAAGAAATGATGACATATTCTTCTAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGGTAACCGTTGGACGTTTTTGCTTTTATTTTCATATGAGGATACTAATGAGATCATCTTGGAGGTTCTGTGATCTATCTCTCTTTTATTGAAGAGTGCATTATCTTGTTTCCGGTTAAATCAATTATTAATTGTAAAGAGAATCTTCTTCATGTCAGTTAGCTGAGGGACTGGAATGCCAACCAGTTTTCTGACAAAATAATATAGTATGTCCATTTATGACAAAAAACAGTTATTTTCCAACTGCCTACAGTATCCTGAATCTCCCAATCATATTAGATTATCTAGTTCCATGAGAATTCGACTGTTTTAGTATAATATACTACATCACTTTTCATTTATCAATATCATTTGGTATTAGATCTTTCAGTTTGATCCAAATGCATAATCTGAGGTTATAAGAGGATGTTGATCATCTTGATTGTCCAGACTATGAAGCACCATTGCGTGCATCTTTCTTGGTGCATTGGAATCTGTTAATCAATTTGATATCGTATAAAACAAAGATCTTTGATGCAGATAAAGCCCTTCAAATTACGATTTAAATGCAAAGGCCAAATCCACCAGATGAATGATCCTGGTCCTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCAGTAGAAGATTCAATCTGGTATGGAATGTTTAATATTCAGTTATTATTATGGAATTGTGTTTGGTAATGGGGTCAAAGTCCAACCTTGGCTGGATAAAAGAAAAGATCATAGATAAGTGAAGGACATCCTCTGTGAGATCTCTCATCGGTTGGGGAGGAGAACGAAATATTCTTTATAAGGGTGTAGAAACCTCTCTCTAGTAGACGCGTTTTAAAAACCTTGAGAGAAAGCGTAAAGAGGATAATATCTGTTAGTGGTGGGCTTGGGCCGTTACATTCTCTCTATTGATATGAAGTCTCTTGAGTGCAATCAAAAACAAAAATACGAGAATTTATACTCTAAAGTAGACAATATGGCACTATTGTGGAGATAAATGAAAAAAGAGTTTGTTGTCTGTAATAAATTTCCATTCATTGTTTAAGAAAAATGATTGGTTAAGTACATTAGTATTGACATTTAATACGTCAAGTTAGGTATTAAAATGGTGCGTTATCCGTGAGGGATTAGCTTTGCAGACATCAATAAAAGGAGGGTGCTATTGTTAAGAAATAAAGTTAGTTTAAGAGCAATATAATCTCATAGACATATCAAGTCATTGGATGACATTTTTAGTTTTAAGAACCATGCTCATTAACTAATATTTTTCTTTAGAAGGCATTAGAGATCATTAAACTAAAAAAAAAAAAAAAAAAAGCATGTTTTGGTGAAAGTATGTGCCAAATTAAGAGCTTTAGTCCTTTTATGCAACAATATCAATACTTCATTCATAATTCCAGGTTTCAATGTCGACATACAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGAAAGTGTCGACTGACAAAGTTAAGTAAACACTAACCTGTAAACTTGCAAATGAATTGCTTCTAATTGTATTTTGTAGGCCAAAAATCCTTGACCCTCGAGATTTTAGCTTTCGATATGCAGCAGGTGATCTGGACTTGGATTTACATCCTTTTAGCTATAATTTCAATGGTGGCGATTTAAGTAAACTTCTATATTGTCCTTCAGCTATTAAAATGGTGAATCTTGGTTAAGTCTTCTTACTACCAAAGATGCTAAGCTTTGTAATCTCAAACCGTGCTTTGTCTAACTTGG

mRNA sequence

TCTCTCTCTCTCTCTCGCCGGAATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATTGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTCAATATCATCAACGATGTCTCCGCCTTCGTCTTGTACATGCACCAACAAGTCCCTTCAATCCTACAGGACATGAGCATTGAATTTGACACTTTGCATGAAGAATACAAAGAGCTGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAATCGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTATTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCGTATCCAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGATAAAGCCCTTCAAATTACGATTTAAATGCAAAGGCCAAATCCACCAGATGAATGATCCTGGTCCTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCAGTAGAAGATTCAATCTGGTTTCAATGTCGACATACAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGAAAGTGTCGACTGACAAAGTTAAGTAAACACTAACCTGTAAACTTGCAAATGAATTGCTTCTAATTGTATTTTGTAGGCCAAAAATCCTTGACCCTCGAGATTTTAGCTTTCGATATGCAGCAGGTGATCTGGACTTGGATTTACATCCTTTTAGCTATAATTTCAATGGTGGCGATTTAAGTAAACTTCTATATTGTCCTTCAGCTATTAAAATGGTGAATCTTGGTTAAGTCTTCTTACTACCAAAGATGCTAAGCTTTGTAATCTCAAACCGTGCTTTGTCTAACTTGG

Coding sequence (CDS)

ATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATTGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTCAATATCATCAACGATGTCTCCGCCTTCGTCTTGTACATGCACCAACAAGTCCCTTCAATCCTACAGGACATGAGCATTGAATTTGACACTTTGCATGAAGAATACAAAGAGCTGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAATCGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTATTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCGTATCCAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGATAAAGCCCTTCAAATTACGATTTAAATGCAAAGGCCAAATCCACCAGATGAATGATCCTGGTCCTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCAGTAGAAGATTCAATCTGGTTTCAATGTCGACATACAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGA

Protein sequence

MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNVQEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDREFQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED

Homology

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BLAST of Carg07242 vs. NCBI nr
Match: XP_022991769.1 (uncharacterized protein LOC111488302 [Cucurbita maxima])

HSP 1 Score: 536.6 bits (1381), Expect = 5.1e-149
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEGTSEMEYTEIESSADYFDSS+LFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE
Sbjct: 34  MEGEGTSEMEYTEIESSADYFDSSLLFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 93

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV
Sbjct: 94  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 153

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           QEVLLILGATPLRPQYVYELCFSHKN VVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA
Sbjct: 154 QEVLLILGATPLRPQYVYELCFSHKNAVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 213

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCK QIHQMNDPGPDRE
Sbjct: 214 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGPDRE 273

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
           FQVGNSDDL NSSVEDSIWFQCRH IKGIAFNRPDED
Sbjct: 274 FQVGNSDDLVNSSVEDSIWFQCRHAIKGIAFNRPDED 310

[Close]

BLAST of Carg07242 vs. NCBI nr
Match: XP_023548798.1 (uncharacterized protein LOC111807345 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 535.4 bits (1378), Expect = 1.1e-148
Identity = 273/277 (98.56%), Postives = 274/277 (98.92%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE
Sbjct: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIK+LISETPNV
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA
Sbjct: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCK QIHQMNDPG DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
           FQVGNSDDLANSSVEDSIWFQCRH IKGIAFNRPDED
Sbjct: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 277

[Close]

BLAST of Carg07242 vs. NCBI nr
Match: XP_022953906.1 (uncharacterized protein LOC111456309 [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 2.1e-147
Identity = 272/277 (98.19%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE
Sbjct: 37  MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 96

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVS FQAAIKSLISET NV
Sbjct: 97  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSRFQAAIKSLISETSNV 156

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA
Sbjct: 157 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 216

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCK QIHQMNDPGPDRE
Sbjct: 217 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGPDRE 276

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
           FQVGNSDDLANSSVEDSIWFQCRH IKGIAFNR DED
Sbjct: 277 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRSDED 313

[Close]

BLAST of Carg07242 vs. NCBI nr
Match: XP_023548796.1 (uncharacterized protein LOC111807345 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548797.1 uncharacterized protein LOC111807345 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.8 bits (1366), Expect = 2.8e-147
Identity = 273/278 (98.20%), Postives = 274/278 (98.56%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE
Sbjct: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIK+LISETPNV
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRK-AIRTLISKDAGS 180
           QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRK AIRTLISKDAGS
Sbjct: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKQAIRTLISKDAGS 180

Query: 181 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDR 240
           ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCK QIHQMNDPG DR
Sbjct: 181 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDR 240

Query: 241 EFQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
           EFQVGNSDDLANSSVEDSIWFQCRH IKGIAFNRPDED
Sbjct: 241 EFQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278

[Close]

BLAST of Carg07242 vs. NCBI nr
Match: XP_008451371.1 (PREDICTED: uncharacterized protein LOC103492681 isoform X1 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 3.5e-134
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIKSLISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCK QI QM +PG DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
             VGNSDDL NSSVED IWFQCRH IKG+AFNRPDED
Sbjct: 241 SHVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Carg07242 vs. TAIR10
Match: AT1G03180.1 (unknown protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-68
Identity = 137/278 (49.28%), Postives = 187/278 (67.27%), Query Frame = 0


Query: 2   EGEGTSEMEY-TEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 61
           EGEGT+E  Y  +I ++A     S +F+IIND+  FVLYMHQQ+PS+LQDMS+EF+ L  
Sbjct: 5   EGEGTTEENYDVDIATTASSLGGSGVFHIINDIVGFVLYMHQQIPSVLQDMSLEFEGLQT 64

Query: 62  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 121
           E+ +L + LA+ ++K   RRK   R REV+  IK++EKLM ++S  ++A++ +I E P +
Sbjct: 65  EFMDLETNLAEPQVKPLVRRKLMSRKREVKNEIKKLEKLMKTISSLRSALQLMIREAPGI 124

Query: 122 QEVLLILGATPLRPQYVYELCFSHKNVVVRGAD-YFVKHKAAEVLSRKAIRTLISKDAGS 181
           Q+V+LILG +PLRPQ  YEL F+ +   V G +  F K KAAE LS+K IR LIS  AGS
Sbjct: 125 QKVVLILGGSPLRPQNAYELLFTQRRDHVLGYEGDFAKSKAAEALSKKTIRALISTGAGS 184

Query: 182 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDR 241
            SYPGP +LF+LV AP ++NLP HF+PKR+FRY++K  P KLRFKC+ Q +  N P    
Sbjct: 185 TSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKCRTQDNATNSP---- 244

Query: 242 EFQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
                           D IW+QCRH IKG+AF++P E+
Sbjct: 245 -------------PTNDLIWYQCRHVIKGLAFHQPVEE 265

[Close]

BLAST of Carg07242 vs. TrEMBL
Match: tr|A0A1S3BSF3|A0A1S3BSF3_CUCME (uncharacterized protein LOC103492681 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492681 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.3e-134
Identity = 248/277 (89.53%), Postives = 256/277 (92.42%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIKSLISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCK QI QM +PG DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
             VGNSDDL NSSVED IWFQCRH IKG+AFNRPDED
Sbjct: 241 SHVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Carg07242 vs. TrEMBL
Match: tr|A0A0A0K8W9|A0A0A0K8W9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390030 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.6e-133
Identity = 246/277 (88.81%), Postives = 253/277 (91.34%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG+SEMEYTEIESS D FDSSILFNIINDVSAFVLYMHQQVPS LQDMSIEFDTLHE
Sbjct: 1   MEGEGSSEMEYTEIESSTDCFDSSILFNIINDVSAFVLYMHQQVPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSEL QNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIKSLISE PN+
Sbjct: 61  EYKELGSELEQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD F KHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFALRGADNFAKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCK QI QM  P  DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKHPDHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
            QVGNSDDL NSSVED IWFQCRH IKG+AFNRPDED
Sbjct: 241 SQVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Carg07242 vs. TrEMBL
Match: tr|A0A1S3BQR2|A0A1S3BQR2_CUCME (uncharacterized protein LOC103492681 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492681 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.8e-110
Identity = 217/277 (78.34%), Postives = 224/277 (80.87%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIKSLISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDRE 240
           SYP                                  PFKLRFKCK QI QM +PG DRE
Sbjct: 181 SYP---------------------------------VPFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
             VGNSDDL NSSVED IWFQCRH IKG+AFNRPDED
Sbjct: 241 SHVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 244

[Close]

BLAST of Carg07242 vs. TrEMBL
Match: tr|A0A061DPQ6|A0A061DPQ6_THECC (F15k9.21, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_004401 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.5e-88
Identity = 166/275 (60.36%), Postives = 214/275 (77.82%), Query Frame = 0


Query: 2   EGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHEE 61
           EGEG+SEM+ TEIE++A++ D S++F+++ D   FVLYMHQQ+PSILQD+S+EF+++H E
Sbjct: 5   EGEGSSEMDLTEIETTAEFLDGSVIFHLVKDAIGFVLYMHQQIPSILQDISLEFESMHAE 64

Query: 62  YKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISETPNVQ 121
           YKEL  +LA+ E+KAS RRKH GRMRE +QGI+RMEK MNSVS  Q A++ +ISE PN+Q
Sbjct: 65  YKELEMDLAKTEVKASLRRKHVGRMRECKQGIRRMEKFMNSVSCLQTALQLMISEIPNIQ 124

Query: 122 EVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSAS 181
           EV+L+LG +P+RPQ+VY++ FSH N        F+K K AE LS+KAIR LIS+ AGS+S
Sbjct: 125 EVILVLGTSPIRPQHVYQMYFSHSNAAPSVEADFIKGKTAEGLSKKAIRALISRGAGSSS 184

Query: 182 YPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGPDREF 241
           YPGPTKLFL+VKAP+S NLPLHF+PKR+FRYSKKI PF+LRF+C+ Q  +++  G     
Sbjct: 185 YPGPTKLFLMVKAPTSFNLPLHFLPKRDFRYSKKIVPFRLRFRCRTQGLEIDASG--HGS 244

Query: 242 QVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDE 277
               S  L NSS  D IWFQCRH IKGIAF  P+E
Sbjct: 245 LSSRSTGLINSSSSDFIWFQCRHAIKGIAFKTPEE 277

[Close]

BLAST of Carg07242 vs. TrEMBL
Match: tr|A0A2I4E0K5|A0A2I4E0K5_9ROSI (uncharacterized protein LOC108985190 isoform X2 OS=Juglans regia OX=51240 GN=LOC108985190 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.3e-88
Identity = 172/280 (61.43%), Postives = 215/280 (76.79%), Query Frame = 0


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEG+G SE E  EIE++AD  DSS++F+I+NDV  FVLYMHQQ+PS+LQDMS+EFDT   
Sbjct: 1   MEGQGNSETECMEIETTADSLDSSVVFHIVNDVLGFVLYMHQQIPSVLQDMSLEFDTFRT 60

Query: 61  EYKELGSEL-AQNELKAS--SRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKSLISET 120
           EY EL + L  QN+ KAS  SRRKH GRMR+ ++GI+R+EKLMN++S  Q A+K +ISE 
Sbjct: 61  EYAELETALTTQNDAKASSLSRRKHIGRMRDAKKGIRRLEKLMNTISNLQTALKQVISEF 120

Query: 121 PNVQEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDA 180
           PN++ V+L+LGA+P+RP++VYELCFSH     RG   F K +AA+ LSRKAIRTL+SK A
Sbjct: 121 PNIEGVVLVLGASPIRPRHVYELCFSHGKAAARGEVDFSKSRAADGLSRKAIRTLVSKGA 180

Query: 181 GSASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKGQIHQMNDPGP 240
           GS SYPGP+KLFLLVKAPSS NLPLHF+PKR+FR+SKKI PF+LR KCK Q         
Sbjct: 181 GSGSYPGPSKLFLLVKAPSSFNLPLHFLPKRDFRFSKKIVPFRLRLKCKTQ--DKKTGAL 240

Query: 241 DREFQVGNSDDLANSSVEDSIWFQCRHTIKGIAFNRPDED 278
           DR  Q GNS  L +S+ ++ IWFQCRHTIKG+A   P E+
Sbjct: 241 DRVCQTGNSISLTDSTSDNLIWFQCRHTIKGLASKTPTEE 278

The following BLAST results are available for this feature:

BLAST of Carg07242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991769.1	5.1e-149	98.19	uncharacterized protein LOC111488302 [Cucurbita maxima]	[more]
XP_023548798.1	1.1e-148	98.56	uncharacterized protein LOC111807345 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022953906.1	2.1e-147	98.19	uncharacterized protein LOC111456309 [Cucurbita moschata]	[more]
XP_023548796.1	2.8e-147	98.20	uncharacterized protein LOC111807345 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_008451371.1	3.5e-134	89.53	PREDICTED: uncharacterized protein LOC103492681 isoform X1 [Cucumis melo]	[more]

BLAST of Carg07242 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03180.1	1.4e-68	49.28	unknown protein	[more]

BLAST of Carg07242 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07242 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BSF3\|A0A1S3BSF3_CUCME	2.3e-134	89.53	uncharacterized protein LOC103492681 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K8W9\|A0A0A0K8W9_CUCSA	2.6e-133	88.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G390030 PE=4 SV=1	[more]
tr\|A0A1S3BQR2\|A0A1S3BQR2_CUCME	1.8e-110	78.34	uncharacterized protein LOC103492681 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A061DPQ6\|A0A061DPQ6_THECC	2.5e-88	60.36	F15k9.21, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_004401 PE=4 SV=1	[more]
tr\|A0A2I4E0K5\|A0A2I4E0K5_9ROSI	4.3e-88	61.43	uncharacterized protein LOC108985190 isoform X2 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07242-RA	Carg07242-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.900.20		coord: 13..270 e-value: 6.5E-23 score: 82.9
None	No IPR available	PANTHER	PTHR15681	FAMILY NOT NAMED	coord: 8..270

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07242	Cla014754	Watermelon (97103) v1	carwmB0106
Carg07242	Csa7G390030	Cucumber (Chinese Long) v2	carcuB0120
Carg07242	MELO3C015843	Melon (DHL92) v3.5.1	carmeB0113
Carg07242	ClCG09G006970	Watermelon (Charleston Gray)	carwcgB0108
Carg07242	CSPI07G16440	Wild cucumber (PI 183967)	carcpiB0125
Carg07242	Cucsa.084580	Cucumber (Gy14) v1	carcgyB0129
Carg07242	CmoCh17G011440	Cucurbita moschata (Rifu)	carcmoB0152
Carg07242	Lsi02G023010	Bottle gourd (USVL1VR-Ls)	carlsiB098
Carg07242	Cp4.1LG12g11720	Cucurbita pepo (Zucchini)	carcpeB0158
Carg07242	CsGy7G014920	Cucumber (Gy14) v2	carcgybB0120
Carg07242	MELO3C015843.2	Melon (DHL92) v3.6.1	carmedB0115
Carg07242	CsaV3_7G028190	Cucumber (Chinese Long) v3	carcucB0129
Carg07242	Cla97C09G169560	Watermelon (97103) v2	carwmbB0117
Carg07242	Bhi09G000859	Wax gourd	carwgoB0131

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07242	Silver-seed gourd	carcarB077
Carg07242	Silver-seed gourd	carcarB131
Carg07242	Silver-seed gourd	carcarB135
Carg07242	Watermelon (Charleston Gray)	carwcgB0113
Carg07242	Cucurbita maxima (Rimu)	carcmaB0142
Carg07242	Cucurbita maxima (Rimu)	carcmaB0144
Carg07242	Cucurbita maxima (Rimu)	carcmaB0148
Carg07242	Cucurbita moschata (Rifu)	carcmoB0154
Carg07242	Cucurbita moschata (Rifu)	carcmoB0157
Carg07242	Cucurbita pepo (Zucchini)	carcpeB0160
Carg07242	Cucurbita pepo (Zucchini)	carcpeB0161
Carg07242	Bottle gourd (USVL1VR-Ls)	carlsiB100
Carg07242	Watermelon (97103) v1	carwmB0109
Carg07242	Watermelon (97103) v2	carwmbB0115
Carg07242	Watermelon (97103) v2	carwmbB0116
Carg07242	Wax gourd	carwgoB0130