Cp4.1LG12g11720 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g11720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	F15k9.21, putative isoform 2
Location	Cp4.1LG12 : 8503759 .. 8508149 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTAAATGAAAGAAATTCTAGATGAAAAAAGAAAAAGAATATTGTTTTTATAATTTTTATTTTAAGAAACATATACGTATAAAACGGTGTCGTATCGTGTTCCCTCCCTCTACTCCCTTTTTCCCGTCCCATTTTTCAATTCAAATATACAAACACATCCCTCGCAAAACAGCTTTTCCCTCTCTCTCTCTCTCTCTCTCGCCGGAATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATCGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTTAATATCATCAACGATGTCTCCGCCTTCGTCTTGTATATGCACCAACAAGTCCCTTCGTAAGTTACTCCTTCCAATTCCAACGTATTTTCCGTTTGTTAACTTCGAAACTGCTGGAAAACGGGGGCAAAATCCATTCAGGTTCGATTCCCGATGGATAATGTGTGATCGATGTTACGTTTGGTTCAACCTTGGCGATTATGACTATGATCGACACTTTTAGTTTGTTAAGTTTTGAGTCGATTGTAGTTGCTGCCTGATTTATGCACGTGGTTGGACTTGATTACCTCAGTCACTCTGTTTGAAATTGTGCCTTGTGAGTTTGGGGGAGGAAAATTAAGGATTCTAGGAGCAATGAGATTTGTTCGATTCGAAATTTACTGAGGCTTTCGCTCTGTAAGATTTGGGAAATTTAAATACTCATTTTTGGTATGTTGAAATTTTCAACCTGTATCTATTCTAAATGTCATATAATATTAGTGATTCGTTTTAGGATTTGTAAATTGCTGAGATGATCGTTTAAAAATGTGTTCCGGATGGAATCGTGAATAGAAAAATGCTAACGTGTCCTTCAGGTCGAGGTTCAAATCTCGGTGCCCAAAAAACGATGAATAGAAGAATGAATGTTGTCGGCTAACAGAACATTTATTTTGCCTAACATTGCTTAATTTGTTCTTTTTATCTGTTTTGTGTCTCTTCTATGATTTTTGCATGTGTCGTATGGCCTGTAATGCAATGTTTTTTGATTGTTTCTTTCCTAGTATTACAAAAAGCCCTTGCAAGAACACCTTTATAAAGTAAATATTGTGGATGATATGTTCTTGAGAAAGAACTCTAGGAGAAAGCTTTAAAAGAATTAAAATATTTTCTTTTGTATTGAAAATACTGTGTCAGTGACTTTATGTAGAGGCCAACTGTTAATTACAAGAACAAACCAGATGAACAGAAGCTAATTAACTAAACAGAAACAGACCAACGGAGCAGAAAATAATCGCTACTAATGATTCTCCTTAACAGTGGAGAAAAGGATCACCCATTAAAGAAACGAACATACGTAGTGTTGGATGATGAAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAATCAAAGAATACTCTCTCTATTTGGCTGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTTAACTGGACGATATCATACCATTGTGGAGAGTCGTGTTAGACACGTAGCTTTTGTTATTTTGAGACTGAAAATCAGTATGCGAGAACACCTTTTAGTCTTTGAAATAAAATGTAATCTACATTTTAAATGTACATGTACACAGAGTTAAAAACTTCTCTTTTCAGTTTCATTAGACATTGGTTTTCTGGTTCAATCTTCAGTAGATCACTTATATCTAGGAAGCCAAAAGTTCATAAATTTTATACATCCCCTACTCTGGATCCTCCTCCATTTTGCTATAAACTAGAATTATACGATTTACAAGGATTCAACATTGTATGAGATATCTATTTGGTATGCTTGTACCATAAGCACTGATGTCTGGTGGCTTATGTGCAGAATCCTACAGGACATGAGCATTGAATTTGACACCTTGCATGAAGAATACAAAGAGCTGGTATGTTAGCTGAGAAAGGGTAGTTTCCTTTACACTTTTTTGCATCAATCTGAGGATCATAAGAACGGTTATTTTTAGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAAACGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTACTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGTGCGTGTGAATTGTAGTACTTTTCCTAAATTTTTTCAGTATTTGATTCAAGTTTTGTTGTTAATAGCAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCATATCCAGGTACACAGTTGTGCACATTAAAGCAAATTGATCAAGTTGGGAGAAGAATTCTCATCCTTGAAATTTTCTCATTAAGAAATGATAACATATTCTTCTAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGGTAACCGTTGGACGTTTTTGCTTTTATTTTCATATGAGGATATTAATGAGATCATCTTGGAGGTTCTGTGATCTATCTCTCTTTTATTGAAGAGTGCTTTATCTTGTTTCCGGTTAAATCAATTATTAATGGTAAAGAGAATCTTCTTAATGTCAGTTAGCTGAGGGACTGGAATGCCAACCAGTTTTCTAACAAAAGAATATAGTATGTCCATTTATGACAAAAAACAGTTATTTTCCAACTGCCTACAGTATCCTGAATCTCCCAATCATATTAGATTATCTAGTTCCATGAGAATTTGACTGTTTTAGTATAATATACTACATCACTTTTCATTTATCAATATCATTTGGTATTAGATCTTTCGGTTTGATCCAAATGCATAATCTGCGGTTATAAGAGGATGTTGATCATCTTGATTGTCCAGACTATGAAGCACCATTGCGTGCATCTTTCTTGGTGCATTGGAATCTGTTAATCAATTTGTTATCGTATAAAACAAAGATCTTTGATGCAGATAAAGCCTTTCAAACTACGATTTAAATGCAAAGCCCAAATCCACCAGATGAATGATCCTGGTCTTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCGGTAGAAGATTCAATCTGGTATGGAATGTTTAATATTGAGTTATTATTATGGAATTGTGAACCTTGACTAGATATAGGATAGATATAGGATATATAAGTAAATAACATCCTCTATGAGATCCCACATCGGTTGGTGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGCAAAGCCCGAAAGGGAAATCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTATATACTCTCTATTGATATAAAGTCTCTTGAGTGAAATCAAAAGCAAAAATATGAGAGTTTATGCTCAAAGTAGACAATATCACATAAAGTAGACAATATCACATTAATGCGGAGATAAATGAAAAAAGAGTTTGTTGTCTATAATAAATTTCCATTCATTGTTCAAGAAAAATGATTGATTAAGTATATATTAGTATTGACATTTAATACGTCGGGTTAGGTCTTAAAATGGTGCGTTGTCTGGTGCGTTGTCTGTGAGTGATTAGCTTTGCAGACATCAATAGAAGGAGGGTGCTATTGTTAAGAAATAAAGTTAGTTTAAGAACAATATAATCTCATAGACTCATATCAAGTCATTGGATGACATTTTTAGTTTTAAGAACCATGCTCATTTACTAATATTTTTCTTTAGAAGGCATTAGAGATCATTAAACTAAAAATTAAAAAAAAAAAAAAAAATGGTTTGGTGAAAGTATGTGCCAAATTAAGAGCTTTGATCCTTTTATGCAACAATATCAATACTTCATTCATCATTCCAGGTTTCAATGTCGACATGCAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGAAAGTGCCGACTGGCAAAGTTACAATACAAGTAAACACTAACCTGTAAACTTGCTAATGAATTGCTTCTAATTGTATTTTGTAGGCCAAAAATCCTTGACCTTCGAGATTTTAGCTTTCGATATGCAGCAGGTGATCTGGACTAGGATTTACATCCTTTTAGCTATAATTTCATTGGTGGCGATTTAAGTAAACTTCTATGTTGTCCTTCAGCTATTAAAATGGTGAGTCTTAGTTAAGTCTTCTTACTACCAAATATGCCAAGCTTTGTAATCTCAAATCGTGCTTTCT

mRNA sequence

ATATTAAATGAAAGAAATTCTAGATGAAAAAAGAAAAAGAATATTGTTTTTATAATTTTTATTTTAAGAAACATATACGTATAAAACGGTGTCGTATCGTGTTCCCTCCCTCTACTCCCTTTTTCCCGTCCCATTTTTCAATTCAAATATACAAACACATCCCTCGCAAAACAGCTTTTCCCTCTCTCTCTCTCTCTCTCTCGCCGGAATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATCGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTTAATATCATCAACGATGTCTCCGCCTTCGTCTTGTATATGCACCAACAAGTCCCTTCAATCCTACAGGACATGAGCATTGAATTTGACACCTTGCATGAAGAATACAAAGAGCTGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAAACGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTACTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCATATCCAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGATAAAGCCTTTCAAACTACGATTTAAATGCAAAGCCCAAATCCACCAGATGAATGATCCTGGTCTTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCGGTAGAAGATTCAATCTGGTTTCAATGTCGACATGCAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGAAAGTGCCGACTGGCAAAGTTACAATACAAGTAAACACTAACCTGTAAACTTGCTAATGAATTGCTTCTAATTGTATTTTGTAGGCCAAAAATCCTTGACCTTCGAGATTTTAGCTTTCGATATGCAGCAGGTGATCTGGACTAGGATTTACATCCTTTTAGCTATAATTTCATTGGTGGCGATTTAAGTAAACTTCTATGTTGTCCTTCAGCTATTAAAATGGTGAGTCTTAGTTAAGTCTTCTTACTACCAAATATGCCAAGCTTTGTAATCTCAAATCGTGCTTTCT

Coding sequence (CDS)

ATGGAGGGAGAAGGTACCTCAGAGATGGAGTATACGGAGATCGAATCCTCCGCCGATTACTTCGACAGCTCCATACTGTTTAATATCATCAACGATGTCTCCGCCTTCGTCTTGTATATGCACCAACAAGTCCCTTCAATCCTACAGGACATGAGCATTGAATTTGACACCTTGCATGAAGAATACAAAGAGCTGGGAAGTGAATTGGCACAGAATGAACTAAAAGCATCGTCACGAAGAAAGCATACTGGCAGAATGAGGGAGGTCAGACAGGGAATTAAGAGAATGGAGAAGTTAATGAATTCAGTCTCTGGGTTTCAAGCTGCCATCAAAACGTTGATTAGTGAGACTCCTAACGTCCAGGAAGTACTATTAATTCTTGGAGCAACCCCACTGCGGCCGCAATATGTTTATGAACTGTGCTTTTCACATAAAAATGTTGTGGTAAGAGGTGCAGATTACTTCGTCAAGCACAAAGCAGCAGAAGTTCTTTCAAGAAAGGCTATTCGAACATTAATCTCAAAGGATGCTGGGTCTGCCTCATATCCAGGCCCTACTAAGTTGTTTCTATTGGTGAAGGCCCCTTCCTCTATCAATCTGCCCTTGCACTTCATTCCAAAACGTGAATTCCGGTATAGCAAAAAGATAAAGCCTTTCAAACTACGATTTAAATGCAAAGCCCAAATCCACCAGATGAATGATCCTGGTCTTGATCGTGAATTTCAAGTTGGAAACTCTGATGACTTGGCCAACTCTTCGGTAGAAGATTCAATCTGGTTTCAATGTCGACATGCAATCAAGGGGATAGCATTCAACAGACCTGATGAAGATTGA

Protein sequence

MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHEEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNVQEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDREFQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED

Homology

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BLAST of Cp4.1LG12g11720 vs. TrEMBL
Match: A0A0A0K8W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390030 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 3.7e-134
Identity = 247/277 (89.17%), Postives = 255/277 (92.06%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG+SEMEYTEIESS D FDSSILFNIINDVSAFVLYMHQQVPS LQDMSIEFDTLHE
Sbjct: 1   MEGEGSSEMEYTEIESSTDCFDSSILFNIINDVSAFVLYMHQQVPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           EYKELGSEL QNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIK+LISE PN+
Sbjct: 61  EYKELGSELEQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD F KHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFALRGADNFAKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCKAQI QM  P  DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKHPDHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
            QVGNSDDL NSSVED IWFQCRHAIKG+AFNRPDED
Sbjct: 241 SQVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Cp4.1LG12g11720 vs. TrEMBL
Match: A0A061DPQ6_THECC (F15k9.21, putative isoform 1 OS=Theobroma cacao GN=TCM_004401 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.1e-89
Identity = 167/275 (60.73%), Postives = 215/275 (78.18%), Query Frame = 1


Query: 2   EGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHEE 61
           EGEG+SEM+ TEIE++A++ D S++F+++ D   FVLYMHQQ+PSILQD+S+EF+++H E
Sbjct: 5   EGEGSSEMDLTEIETTAEFLDGSVIFHLVKDAIGFVLYMHQQIPSILQDISLEFESMHAE 64

Query: 62  YKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNVQ 121
           YKEL  +LA+ E+KAS RRKH GRMRE +QGI+RMEK MNSVS  Q A++ +ISE PN+Q
Sbjct: 65  YKELEMDLAKTEVKASLRRKHVGRMRECKQGIRRMEKFMNSVSCLQTALQLMISEIPNIQ 124

Query: 122 EVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSAS 181
           EV+L+LG +P+RPQ+VY++ FSH N        F+K K AE LS+KAIR LIS+ AGS+S
Sbjct: 125 EVILVLGTSPIRPQHVYQMYFSHSNAAPSVEADFIKGKTAEGLSKKAIRALISRGAGSSS 184

Query: 182 YPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDREF 241
           YPGPTKLFL+VKAP+S NLPLHF+PKR+FRYSKKI PF+LRF+C+ Q  +++  G     
Sbjct: 185 YPGPTKLFLMVKAPTSFNLPLHFLPKRDFRYSKKIVPFRLRFRCRTQGLEIDASG--HGS 244

Query: 242 QVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDE 277
               S  L NSS  D IWFQCRHAIKGIAF  P+E
Sbjct: 245 LSSRSTGLINSSSSDFIWFQCRHAIKGIAFKTPEE 277

[Close]

BLAST of Cp4.1LG12g11720 vs. TrEMBL
Match: A0A0D2MVE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G081100 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-88
Identity = 166/278 (59.71%), Postives = 220/278 (79.14%), Query Frame = 1


Query: 2   EGEGTSEME--YTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLH 61
           EGEG+SE E  +TEIE++A+  D S++F+++ D   F+LYMHQQ+PSILQD+++EFD +H
Sbjct: 5   EGEGSSEPEIQFTEIETTAECLDGSLIFHVVKDTIGFILYMHQQIPSILQDITLEFDLMH 64

Query: 62  EEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPN 121
            EYKEL  +LA+ ELKAS RRKH GRMREV+QGI++MEK M+++S  Q+A++ LIS+ PN
Sbjct: 65  TEYKELEVDLAKTELKASLRRKHIGRMREVKQGIRKMEKFMSTISSLQSALQLLISQIPN 124

Query: 122 VQEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGS 181
           + EV+L+LG +P+RPQ+VY+LCFSH N        F+K K AE LSRKAIR LISKDAGS
Sbjct: 125 IHEVILVLGTSPIRPQHVYQLCFSHANPAPSAEANFIKGKTAEWLSRKAIRALISKDAGS 184

Query: 182 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDR 241
           +SYPGPTKLFL+VKAP+S+NLPLHF+PKR+FRYSKKI PF+LRF+C+ Q  ++++   D 
Sbjct: 185 SSYPGPTKLFLMVKAPTSLNLPLHFLPKRDFRYSKKIVPFRLRFRCRTQGLKIDE---DH 244

Query: 242 EFQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
               G S  + +S+  D IWFQCRHAIKGIAF  P+E+
Sbjct: 245 NSLPGRSTGIDSSN--DLIWFQCRHAIKGIAFKTPEEE 277

[Close]

BLAST of Cp4.1LG12g11720 vs. TrEMBL
Match: A0A067FMZ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036230mg PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 4.9e-86
Identity = 167/277 (60.29%), Postives = 213/277 (76.90%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEG+G+SEM++TEIE++A   DSS++F++INDV+ FVLYMHQQ+PSILQD+S+EFD L  
Sbjct: 1   MEGQGSSEMQFTEIETNAGSLDSSVIFHVINDVAGFVLYMHQQIPSILQDISLEFDALQT 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           E+KEL  +L     + +SRR +  R RE++QGI+R+EKLMN++S  Q A++ LISE PN+
Sbjct: 61  EFKELDMDL-----RPTSRRMNLSRKREIKQGIRRLEKLMNTISSLQTALRLLISEIPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           QEV+ +LGA+PLRPQ++Y+L FSH   V RG   F K KAAE LSRKAIRTLISK AGS 
Sbjct: 121 QEVIFVLGASPLRPQHIYQLYFSHGKSVSRGEPDFTKGKAAEGLSRKAIRTLISKGAGSD 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
           SYPGPTKLFLLVKA SS+++PLHF+PKR+FRYSKKI PF+LRFKCK     M D  +D  
Sbjct: 181 SYPGPTKLFLLVKASSSLSMPLHFLPKRDFRYSKKIVPFRLRFKCK-----MQDKAMDDY 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
                S +L + + +D IWFQCRH IKGIAF  P E+
Sbjct: 241 ASQACSPNLRDYTSDDLIWFQCRHIIKGIAFKTPAEE 267

[Close]

BLAST of Cp4.1LG12g11720 vs. TrEMBL
Match: A0A0B0MW01_GOSAR (Non-structural 2 OS=Gossypium arboreum GN=F383_26722 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.4e-85
Identity = 163/278 (58.63%), Postives = 217/278 (78.06%), Query Frame = 1


Query: 2   EGEGTSE--MEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLH 61
           EGEG+ E  +++TEIE++A+  D S++F+++ D   F+LYMHQQ+PSILQD+++EFD +H
Sbjct: 5   EGEGSLEPGIQFTEIETTAECLDGSLIFHVVKDTIGFILYMHQQIPSILQDITLEFDLMH 64

Query: 62  EEYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPN 121
            EYKEL  +L++ ELKAS RRKH GRMREV+QGI++MEK M+++S  Q A++ LIS+ PN
Sbjct: 65  TEYKELEVDLSKTELKASLRRKHIGRMREVKQGIRKMEKFMSTISSLQTALQLLISQIPN 124

Query: 122 VQEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGS 181
           + EV L+LG +P+RPQ+VY+LCFSH N        F+K K AE LSRKAIR LISKDAGS
Sbjct: 125 IHEVFLVLGTSPIRPQHVYQLCFSHANPAPFAEANFIKGKTAEGLSRKAIRALISKDAGS 184

Query: 182 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDR 241
           +SY G TKLFL+VKAP+S+NLPLHF+PKR+FRYSKKI PF+LRFKC+AQ  ++++   D 
Sbjct: 185 SSYLGHTKLFLMVKAPTSLNLPLHFLPKRDFRYSKKIVPFRLRFKCRAQGLKIDE---DH 244

Query: 242 EFQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
               G S  + +S+  D IWFQCRHAIKGIAF  P+E+
Sbjct: 245 SSLPGRSTGIDSSN--DLIWFQCRHAIKGIAFKTPEEE 277

[Close]

BLAST of Cp4.1LG12g11720 vs. TAIR10
Match: AT1G03180.1 (AT1G03180.1 unknown protein)

HSP 1 Score: 258.1 bits (658), Expect = 6.3e-69
Identity = 137/278 (49.28%), Postives = 187/278 (67.27%), Query Frame = 1


Query: 2   EGEGTSEMEY-TEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 61
           EGEGT+E  Y  +I ++A     S +F+IIND+  FVLYMHQQ+PS+LQDMS+EF+ L  
Sbjct: 5   EGEGTTEENYDVDIATTASSLGGSGVFHIINDIVGFVLYMHQQIPSVLQDMSLEFEGLQT 64

Query: 62  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 121
           E+ +L + LA+ ++K   RRK   R REV+  IK++EKLM ++S  ++A++ +I E P +
Sbjct: 65  EFMDLETNLAEPQVKPLVRRKLMSRKREVKNEIKKLEKLMKTISSLRSALQLMIREAPGI 124

Query: 122 QEVLLILGATPLRPQYVYELCFSHKNVVVRGAD-YFVKHKAAEVLSRKAIRTLISKDAGS 181
           Q+V+LILG +PLRPQ  YEL F+ +   V G +  F K KAAE LS+K IR LIS  AGS
Sbjct: 125 QKVVLILGGSPLRPQNAYELLFTQRRDHVLGYEGDFAKSKAAEALSKKTIRALISTGAGS 184

Query: 182 ASYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDR 241
            SYPGP +LF+LV AP ++NLP HF+PKR+FRY++K  P KLRFKC+ Q +  N P    
Sbjct: 185 TSYPGPMRLFILVHAPPTLNLPQHFLPKRDFRYNRKFVPSKLRFKCRTQDNATNSP---- 244

Query: 242 EFQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
                           D IW+QCRH IKG+AF++P E+
Sbjct: 245 -------------PTNDLIWYQCRHVIKGLAFHQPVEE 265

[Close]

BLAST of Cp4.1LG12g11720 vs. NCBI nr
Match: gi|659100988|ref|XP_008451371.1| (PREDICTED: uncharacterized protein LOC103492681 isoform X1 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 4.8e-135
Identity = 249/277 (89.89%), Postives = 258/277 (93.14%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIK+LISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCKAQI QM +PG DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
             VGNSDDL NSSVED IWFQCRHAIKG+AFNRPDED
Sbjct: 241 SHVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Cp4.1LG12g11720 vs. NCBI nr
Match: gi|778727744|ref|XP_011659312.1| (PREDICTED: uncharacterized protein LOC105436163 [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 5.3e-134
Identity = 247/277 (89.17%), Postives = 255/277 (92.06%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG+SEMEYTEIESS D FDSSILFNIINDVSAFVLYMHQQVPS LQDMSIEFDTLHE
Sbjct: 1   MEGEGSSEMEYTEIESSTDCFDSSILFNIINDVSAFVLYMHQQVPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           EYKELGSEL QNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIK+LISE PN+
Sbjct: 61  EYKELGSELEQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD F KHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFALRGADNFAKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCKAQI QM  P  DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKHPDHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
            QVGNSDDL NSSVED IWFQCRHAIKG+AFNRPDED
Sbjct: 241 SQVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 277

[Close]

BLAST of Cp4.1LG12g11720 vs. NCBI nr
Match: gi|659100990|ref|XP_008451372.1| (PREDICTED: uncharacterized protein LOC103492681 isoform X2 [Cucumis melo])

HSP 1 Score: 451.1 bits (1159), Expect = 1.4e-123
Identity = 232/261 (88.89%), Postives = 242/261 (92.72%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIK+LISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDAGS 
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDAGSV 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
           SYPGPTKLFLLVKAPSS NLPLHFIPKREFRYS+KI PFKLRFKCKAQI QM +PG DRE
Sbjct: 181 SYPGPTKLFLLVKAPSSFNLPLHFIPKREFRYSRKIVPFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQ 262
             VGNSDDL NSSVED IW++
Sbjct: 241 SHVGNSDDLTNSSVEDPIWYK 261

[Close]

BLAST of Cp4.1LG12g11720 vs. NCBI nr
Match: gi|659100992|ref|XP_008451373.1| (PREDICTED: uncharacterized protein LOC103492681 isoform X3 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-108
Identity = 215/277 (77.62%), Postives = 226/277 (81.59%), Query Frame = 1


Query: 1   MEGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHE 60
           MEGEG SEMEYTEIESSAD FDSSILFNIINDVSAFVLYMHQQ+PS LQDMSIEFDTLHE
Sbjct: 1   MEGEGRSEMEYTEIESSADCFDSSILFNIINDVSAFVLYMHQQLPSTLQDMSIEFDTLHE 60

Query: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNV 120
           EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQ AIK+LISE PN+
Sbjct: 61  EYKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQVAIKSLISEAPNI 120

Query: 121 QEVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSA 180
           +EVLLILGATPLRPQYVYE+CFSHK   +RGAD FVKHKAAEVLSRKAIRTLISKDA   
Sbjct: 121 EEVLLILGATPLRPQYVYEMCFSHKRFGLRGADNFVKHKAAEVLSRKAIRTLISKDA--- 180

Query: 181 SYPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDRE 240
                           S++ P+               PFKLRFKCKAQI QM +PG DRE
Sbjct: 181 ---------------GSVSYPV---------------PFKLRFKCKAQIQQMKNPGHDRE 240

Query: 241 FQVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDED 278
             VGNSDDL NSSVED IWFQCRHAIKG+AFNRPDED
Sbjct: 241 SHVGNSDDLTNSSVEDPIWFQCRHAIKGLAFNRPDED 244

[Close]

BLAST of Cp4.1LG12g11720 vs. NCBI nr
Match: gi|590717511|ref|XP_007050632.1| (F15k9.21, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 337.0 bits (863), Expect = 3.0e-89
Identity = 167/275 (60.73%), Postives = 215/275 (78.18%), Query Frame = 1


Query: 2   EGEGTSEMEYTEIESSADYFDSSILFNIINDVSAFVLYMHQQVPSILQDMSIEFDTLHEE 61
           EGEG+SEM+ TEIE++A++ D S++F+++ D   FVLYMHQQ+PSILQD+S+EF+++H E
Sbjct: 5   EGEGSSEMDLTEIETTAEFLDGSVIFHLVKDAIGFVLYMHQQIPSILQDISLEFESMHAE 64

Query: 62  YKELGSELAQNELKASSRRKHTGRMREVRQGIKRMEKLMNSVSGFQAAIKTLISETPNVQ 121
           YKEL  +LA+ E+KAS RRKH GRMRE +QGI+RMEK MNSVS  Q A++ +ISE PN+Q
Sbjct: 65  YKELEMDLAKTEVKASLRRKHVGRMRECKQGIRRMEKFMNSVSCLQTALQLMISEIPNIQ 124

Query: 122 EVLLILGATPLRPQYVYELCFSHKNVVVRGADYFVKHKAAEVLSRKAIRTLISKDAGSAS 181
           EV+L+LG +P+RPQ+VY++ FSH N        F+K K AE LS+KAIR LIS+ AGS+S
Sbjct: 125 EVILVLGTSPIRPQHVYQMYFSHSNAAPSVEADFIKGKTAEGLSKKAIRALISRGAGSSS 184

Query: 182 YPGPTKLFLLVKAPSSINLPLHFIPKREFRYSKKIKPFKLRFKCKAQIHQMNDPGLDREF 241
           YPGPTKLFL+VKAP+S NLPLHF+PKR+FRYSKKI PF+LRF+C+ Q  +++  G     
Sbjct: 185 YPGPTKLFLMVKAPTSFNLPLHFLPKRDFRYSKKIVPFRLRFRCRTQGLEIDASG--HGS 244

Query: 242 QVGNSDDLANSSVEDSIWFQCRHAIKGIAFNRPDE 277
               S  L NSS  D IWFQCRHAIKGIAF  P+E
Sbjct: 245 LSSRSTGLINSSSSDFIWFQCRHAIKGIAFKTPEE 277

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g11720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g11720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8W9_CUCSA	3.7e-134	89.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390030 PE=4 SV=1	[more]
A0A061DPQ6_THECC	2.1e-89	60.73	F15k9.21, putative isoform 1 OS=Theobroma cacao GN=TCM_004401 PE=4 SV=1	[more]
A0A0D2MVE8_GOSRA	2.3e-88	59.71	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G081100 PE=4 SV=1	[more]
A0A067FMZ4_CITSI	4.9e-86	60.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036230mg PE=4 SV=1	[more]
A0A0B0MW01_GOSAR	2.4e-85	58.63	Non-structural 2 OS=Gossypium arboreum GN=F383_26722 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g11720 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03180.1	6.3e-69	49.28	unknown protein	[more]

BLAST of Cp4.1LG12g11720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100988\|ref\|XP_008451371.1\|	4.8e-135	89.89	PREDICTED: uncharacterized protein LOC103492681 isoform X1 [Cucumis melo]	[more]
gi\|778727744\|ref\|XP_011659312.1\|	5.3e-134	89.17	PREDICTED: uncharacterized protein LOC105436163 [Cucumis sativus]	[more]
gi\|659100990\|ref\|XP_008451372.1\|	1.4e-123	88.89	PREDICTED: uncharacterized protein LOC103492681 isoform X2 [Cucumis melo]	[more]
gi\|659100992\|ref\|XP_008451373.1\|	1.0e-108	77.62	PREDICTED: uncharacterized protein LOC103492681 isoform X3 [Cucumis melo]	[more]
gi\|590717511\|ref\|XP_007050632.1\|	3.0e-89	60.73	F15k9.21, putative isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g11720.1	Cp4.1LG12g11720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15681	FAMILY NOT NAMED	coord: 7..276 score: 8.1
None	No IPR available	PANTHER	PTHR15681:SF1	MAD2L1-BINDING PROTEIN	coord: 7..276 score: 8.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g11720	Cucsa.084580	Cucumber (Gy14) v1	cgycpeB0151
Cp4.1LG12g11720	CmoCh17G011440	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g11720	Cla014754	Watermelon (97103) v1	cpewmB131
Cp4.1LG12g11720	Csa7G390030	Cucumber (Chinese Long) v2	cpecuB161
Cp4.1LG12g11720	MELO3C015843	Melon (DHL92) v3.5.1	cpemeB124
Cp4.1LG12g11720	ClCG09G006970	Watermelon (Charleston Gray)	cpewcgB126
Cp4.1LG12g11720	CSPI07G16440	Wild cucumber (PI 183967)	cpecpiB163
Cp4.1LG12g11720	Lsi02G023010	Bottle gourd (USVL1VR-Ls)	cpelsiB113
Cp4.1LG12g11720	MELO3C015843.2	Melon (DHL92) v3.6.1	cpemedB151
Cp4.1LG12g11720	CsaV3_7G028190	Cucumber (Chinese Long) v3	cpecucB0189
Cp4.1LG12g11720	Bhi09G000859	Wax gourd	cpewgoB0203
Cp4.1LG12g11720	CsGy7G014920	Cucumber (Gy14) v2	cgybcpeB906
Cp4.1LG12g11720	Carg07242	Silver-seed gourd	carcpeB0158

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g11720	Cucumber (Gy14) v2	cgybcpeB310
Cp4.1LG12g11720	Melon (DHL92) v3.6.1	cpemedB171
Cp4.1LG12g11720	Silver-seed gourd	carcpeB0100
Cp4.1LG12g11720	Silver-seed gourd	carcpeB1198
Cp4.1LG12g11720	Cucumber (Chinese Long) v3	cpecucB0159
Cp4.1LG12g11720	Wax gourd	cpewgoB0197
Cp4.1LG12g11720	Cucurbita pepo (Zucchini)	cpecpeB157
Cp4.1LG12g11720	Cucurbita pepo (Zucchini)	cpecpeB183
Cp4.1LG12g11720	Cucurbita pepo (Zucchini)	cpecpeB192
Cp4.1LG12g11720	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g11720	Cucurbita maxima (Rimu)	cmacpeB520
Cp4.1LG12g11720	Cucurbita maxima (Rimu)	cmacpeB902
Cp4.1LG12g11720	Cucurbita moschata (Rifu)	cmocpeB479
Cp4.1LG12g11720	Cucurbita moschata (Rifu)	cmocpeB839
Cp4.1LG12g11720	Bottle gourd (USVL1VR-Ls)	cpelsiB119
Cp4.1LG12g11720	Watermelon (Charleston Gray)	cpewcgB147
Cp4.1LG12g11720	Watermelon (97103) v1	cpewmB150