Carg07013 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07013
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	extra-large guanine nucleotide-binding protein 3-like
Location	Cucurbita_argyrosperma_scaffold_065 : 913079 .. 914202 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCCATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCAGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACACTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCTAGCCGCATCAGCGGCATGGGTTCCATGTATCTTCATCACAGAGCCACGCCGGGAAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACCTACATCTATGTCTTCCGCCATCGTTGCCTGGTATGCATCCATTTCATTTGTAACACACACAAAAACATACATACAGAAACAATCCACTGAAAACACATGCATATTGCTATGAATTTGGCAGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTTAATCATTGAACCCTCCAACTTTATAGGAATTGATTTAAAACTTTATTAAACATTAGAGACCAAAATTGAATGGGTTATCACCATTCATCAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGCGGCGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG

mRNA sequence

ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCCATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCAGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACACTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCTAGCCGCATCAGCGGCATGGGTTCCATGTATCTTCATCACAGAGCCACGCCGGGAAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACCTACATCTATGTCTTCCGCCATCGTTGCCTGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGCGGCGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG

Coding sequence (CDS)

ATGGATGATGGAGGAGGGTTCAGAAAGGCAAGAATGGAGCTTGAAGCACTCTACGAGGGAGTGCCAGACGAGTCAGTGAATCTCACCTTCCGACATCTCACAGACGTCAATGTTCAATCCAGAGCCAACCCATCCATCCAAATCCCAATCCCAAGAGATAATCAAAGCACCCCATTAACCAAACTCCCCAGCCTAGACTTCAACAGAGCCCTCCAAGCAGCCAACCAATACTCCCGCCCTGACGCCAAAATCAGCCTCCATCCGAGTGCGCAGGTCGGTGGGAGTAGTAGTGGGTCGCCGCTTGCCCCTGCCGGCCACACTCAAAGCCGTCCAACTTCGGAGCATGAGTACATGCATGCCCATGTTGGTGGGTTGAGGCCGGCTTTGGAGTACAGTGCAGCCTACGAGGAGGCTAGCCGCATCAGCGGCATGGGTTCCATGTATCTTCATCACAGAGCCACGCCGGGAAGACGCCGCCCGGGGATTCCTCACTCCAATATCTGCACCAACTGCACCACCTACATCTATGTCTTCCGCCATCGTTGCCTGGTCTGTGGAAGAGTTTACTGCCGGCAATGTGTGAGAATTGGGATGGGGGAGATGACGGAGGGAAGAAAGTGCATAGAATGTTTGGGAAGAAAATTCAGCCACAGGTACATAGGGGAGGCAGGAGATGTGGGGTGCTTCGGTTGGAGGTACTCAACTGCGGTGAAGCACGCAGAGCTTAAGTGGGCGGAGAAAGGGCCTCGCCGGAGAGGAGAGAGAGCCCCACTGAGAGGGTGCGGCGGCGTAACGAACTCCATGAGTATGATGTCGGCAAGTCAGAGCCCATGGGCACCGGCCACAACCAGTGTGGATATTTCCGCCGTTTACAGCTCTCGTTTCGCCGCCATGTCGTCCCCTCATTCTCCGGCTCACCGCCACCATTTACCGTTTTAG

Protein sequence

MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHAELKWAEKGPRRRGERAPLRGCGGVTNSMSMMSASQSPWAPATTSVDISAVYSSRFAAMSSPHSPAHRHHLPF

Homology

[Close]

BLAST of Carg07013 vs. NCBI nr
Match: XP_022948781.1 (extra-large guanine nucleotide-binding protein 3-like [Cucurbita moschata] >XP_022948782.1 extra-large guanine nucleotide-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 601.3 bits (1549), Expect = 1.9e-168
Identity = 297/318 (93.40%), Postives = 297/318 (93.40%), Query Frame = 0


Query: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60
           MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT
Sbjct: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60

Query: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA 120
           KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGH QSRPTSEHEYMHA
Sbjct: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHIQSRPTSEHEYMHA 120

Query: 121 HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180
           HVGGLRPALEYSAAYEEASRISGMGS YLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH
Sbjct: 121 HVGGLRPALEYSAAYEEASRISGMGSTYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180

Query: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA 240
           RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA
Sbjct: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA 240

Query: 241 ELKWAEKGPRRRGERAPLRGC------GGVTNSMSMMSASQSPWAPATTSVDISAVYSSR 300
           ELKWAEKGPRRRGERAPLRGC                   QSPWAPATTSVDISAVYSSR
Sbjct: 241 ELKWAEKGPRRRGERAPLRGCXXXXXXXXXXXXXXXXXXXQSPWAPATTSVDISAVYSSR 300

Query: 301 FAAMSSPHSPAHRHHLPF 313
           FAAMSSPHSPAHRHHLPF
Sbjct: 301 FAAMSSPHSPAHRHHLPF 318

[Close]

BLAST of Carg07013 vs. NCBI nr
Match: XP_023521176.1 (uncharacterized protein LOC111784864 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.6 bits (1355), Expect = 5.9e-146
Identity = 256/259 (98.84%), Postives = 257/259 (99.23%), Query Frame = 0


Query: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60
           MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT
Sbjct: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60

Query: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA 120
           KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA
Sbjct: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA 120

Query: 121 HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180
           HV GLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH
Sbjct: 121 HV-GLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180

Query: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA 240
           RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFS+RYIGEAGDVGCFGWRYSTAVKHA
Sbjct: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSNRYIGEAGDVGCFGWRYSTAVKHA 240

Query: 241 ELKWAEKGPRRRGERAPLR 260
           ELKWAEKGPRRRGERAP R
Sbjct: 241 ELKWAEKGPRRRGERAPRR 258

[Close]

BLAST of Carg07013 vs. NCBI nr
Match: XP_022997719.1 (uncharacterized protein LOC111492594 [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 3.8e-145
Identity = 263/305 (86.23%), Postives = 273/305 (89.51%), Query Frame = 0


Query: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60
           MDDGGGF+KARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT
Sbjct: 1   MDDGGGFKKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60

Query: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA 120
           KLPSLDFNRALQAANQYSRPD+KISLHPSAQVGGSSSGSPLAPAGH QSRPTSEHEYMHA
Sbjct: 61  KLPSLDFNRALQAANQYSRPDSKISLHPSAQVGGSSSGSPLAPAGHIQSRPTSEHEYMHA 120

Query: 121 HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180
           HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH
Sbjct: 121 HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180

Query: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA 240
           RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA
Sbjct: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGWRYSTAVKHA 240

Query: 241 ELKWAEKGPRRRGERAPLRGCGGV-TNSMSMMSASQSPWAPATTSVDISAVYSSRFAAMS 300
           ELKWAEKGPRRRGER   +G      ++M++   S+    P T S  I + +   F   S
Sbjct: 241 ELKWAEKGPRRRGEREREKGSERERVSTMALRILSRKNLTP-TISGAIGSGHFRGFQTFS 300

Query: 301 SPHSP 305
            P  P
Sbjct: 301 LPDLP 304

[Close]

BLAST of Carg07013 vs. NCBI nr
Match: XP_008457288.1 (PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis melo])

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 259/326 (79.45%), Postives = 274/326 (84.05%), Query Frame = 0


Query: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQ-------SRANPS----IQIPIP 62
           D GGFRKAR+ELEALYEGVPD+SVNLTFRHLTDVN+Q        RANPS          
Sbjct: 2   DDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSXXXXXXXXXX 61

Query: 63  RDNQSTPLTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPL-APAGHTQSR 122
             N++TPL KLPSLDFNRALQAANQ+SRPDAKISLHPSAQVGG  SG PL A AG  QS 
Sbjct: 62  XXNETTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVGG--SGGPLHATAGDIQSH 121

Query: 123 PTSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTN 182
           P SEHE    HVGGLRPALEYSAAYEEASRISG+GSMY HHRAT   RRPGIPHSNICTN
Sbjct: 122 PKSEHE----HVGGLRPALEYSAAYEEASRISGIGSMYGHHRATARSRRPGIPHSNICTN 181

Query: 183 CTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFG 242
           CTTYIY+FRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIG+AGDVGCFG
Sbjct: 182 CTTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGKAGDVGCFG 241

Query: 243 WRYSTAVKHAELKWAEKGPRRRGERA-PLRGC-GGVTNSMSMMSASQSPWAPATTSVDIS 302
           WRYS+AVK AELKWAEKGPRR+GERA   RG  GGVTNS+SM S SQSPWAP T+SVD+S
Sbjct: 242 WRYSSAVKQAELKWAEKGPRRKGERALHSRGYGGGVTNSISMTSPSQSPWAPTTSSVDVS 301

Query: 303 AVYSSRFAAM--SSPHSPAHRHHLPF 313
            +YSSRFA M  SSPHSPAHRHHLPF
Sbjct: 302 TIYSSRFAVMSSSSPHSPAHRHHLPF 321

[Close]

BLAST of Carg07013 vs. NCBI nr
Match: XP_023521181.1 (uncharacterized protein LOC111784869 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.1 bits (1115), Expect = 4.0e-118
Identity = 213/217 (98.16%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIPIPRDNQSTPLT 60
           MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQI IPRDNQSTPLT
Sbjct: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRANPSIQIQIPRDNQSTPLT 60

Query: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRPTSEHEYMHA 120
           KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGH QSRPTSEHEYMHA
Sbjct: 61  KLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHNQSRPTSEHEYMHA 120

Query: 121 HVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180
           HV GLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH
Sbjct: 121 HV-GLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTTYIYVFRH 180

Query: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSH 218
           RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFS+
Sbjct: 181 RCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSN 216

[Close]

BLAST of Carg07013 vs. TAIR10
Match: AT1G31930.1 (extra-large GTP-binding protein 3)

HSP 1 Score: 48.1 bits (113), Expect = 1.1e-05
Identity = 19/46 (41.30%), Postives = 25/46 (54.35%), Query Frame = 0


Query: 168 CTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGR 214
           C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G+
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIGQ 221

[Close]

BLAST of Carg07013 vs. TAIR10
Match: AT2G23460.1 (extra-large G-protein 1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05
Identity = 20/43 (46.51%), Postives = 22/43 (51.16%), Query Frame = 0


Query: 182 CLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAG 225
           CLVC   YC  CV   MG M EGRKC+ C+G        G  G
Sbjct: 240 CLVCDAKYCNSCVLRAMGSMPEGRKCVTCIGFPIDESKRGSLG 282

[Close]

BLAST of Carg07013 vs. TAIR10
Match: AT4G34390.1 (extra-large GTP-binding protein 2)

HSP 1 Score: 46.6 bits (109), Expect = 3.3e-05
Identity = 29/82 (35.37%), Postives = 39/82 (47.56%), Query Frame = 0


Query: 132 SAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTT-YIYVFRHRCLVCGRVYC 191
           S+  +E+S +S   S+   HRA    +R        C  C     +  +  C+VC   YC
Sbjct: 184 SSECDESSYVSDGESIAATHRAERKGKR------GSCYRCQLGNRFTEKEVCIVCDAKYC 243

Query: 192 RQCVRIGMGEMTEGRKCIECLG 213
             CVR  MG M EGRKC  C+G
Sbjct: 244 FNCVRRAMGAMPEGRKCQACIG 259

[Close]

BLAST of Carg07013 vs. Swiss-Prot
Match: sp|Q9C516|XLG3_ARATH (Extra-large guanine nucleotide-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=XLG3 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.0e-04
Identity = 19/46 (41.30%), Postives = 25/46 (54.35%), Query Frame = 0


Query: 168 CTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGR 214
           C  C    +  +  C+VC   YC  CV   MG M EGRKC+ C+G+
Sbjct: 176 CYRCGKAKWENKETCIVCDEKYCGNCVLRAMGSMPEGRKCVSCIGQ 221

[Close]

BLAST of Carg07013 vs. Swiss-Prot
Match: sp|O80462|XLG1_ARATH (Extra-large guanine nucleotide-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=XLG1 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.4e-04
Identity = 20/43 (46.51%), Postives = 22/43 (51.16%), Query Frame = 0


Query: 182 CLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAG 225
           CLVC   YC  CV   MG M EGRKC+ C+G        G  G
Sbjct: 240 CLVCDAKYCNSCVLRAMGSMPEGRKCVTCIGFPIDESKRGSLG 282

[Close]

BLAST of Carg07013 vs. Swiss-Prot
Match: sp|C6KIE6|XLG2_ARATH (Extra-large guanine nucleotide-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=XLG2 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.9e-04
Identity = 29/82 (35.37%), Postives = 39/82 (47.56%), Query Frame = 0


Query: 132 SAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNCTT-YIYVFRHRCLVCGRVYC 191
           S+  +E+S +S   S+   HRA    +R        C  C     +  +  C+VC   YC
Sbjct: 184 SSECDESSYVSDGESIAATHRAERKGKR------GSCYRCQLGNRFTEKEVCIVCDAKYC 243

Query: 192 RQCVRIGMGEMTEGRKCIECLG 213
             CVR  MG M EGRKC  C+G
Sbjct: 244 FNCVRRAMGAMPEGRKCQACIG 259

[Close]

BLAST of Carg07013 vs. TrEMBL
Match: tr|A0A1S3C6F3|A0A1S3C6F3_CUCME (extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo OX=3656 GN=LOC103497015 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 1.4e-135
Identity = 259/326 (79.45%), Postives = 274/326 (84.05%), Query Frame = 0


Query: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQ-------SRANPS----IQIPIP 62
           D GGFRKAR+ELEALYEGVPD+SVNLTFRHLTDVN+Q        RANPS          
Sbjct: 2   DDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSXXXXXXXXXX 61

Query: 63  RDNQSTPLTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPL-APAGHTQSR 122
             N++TPL KLPSLDFNRALQAANQ+SRPDAKISLHPSAQVGG  SG PL A AG  QS 
Sbjct: 62  XXNETTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQVGG--SGGPLHATAGDIQSH 121

Query: 123 PTSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTN 182
           P SEHE    HVGGLRPALEYSAAYEEASRISG+GSMY HHRAT   RRPGIPHSNICTN
Sbjct: 122 PKSEHE----HVGGLRPALEYSAAYEEASRISGIGSMYGHHRATARSRRPGIPHSNICTN 181

Query: 183 CTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFG 242
           CTTYIY+FRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIG+AGDVGCFG
Sbjct: 182 CTTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGKAGDVGCFG 241

Query: 243 WRYSTAVKHAELKWAEKGPRRRGERA-PLRGC-GGVTNSMSMMSASQSPWAPATTSVDIS 302
           WRYS+AVK AELKWAEKGPRR+GERA   RG  GGVTNS+SM S SQSPWAP T+SVD+S
Sbjct: 242 WRYSSAVKQAELKWAEKGPRRKGERALHSRGYGGGVTNSISMTSPSQSPWAPTTSSVDVS 301

Query: 303 AVYSSRFAAM--SSPHSPAHRHHLPF 313
            +YSSRFA M  SSPHSPAHRHHLPF
Sbjct: 302 TIYSSRFAVMSSSSPHSPAHRHHLPF 321

[Close]

BLAST of Carg07013 vs. TrEMBL
Match: tr|A0A0A0LPU0|A0A0A0LPU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G026000 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 3.6e-115
Identity = 225/325 (69.23%), Postives = 240/325 (73.85%), Query Frame = 0


Query: 3   DGGGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQ-------SRANPS----IQIPIP 62
           D GGFRKAR+ELEALYEGVPD+SVNLTFRHLTDVN+Q        RANPS          
Sbjct: 2   DDGGFRKARLELEALYEGVPDDSVNLTFRHLTDVNLQPNSSFEKRRANPSXXXXXXXXXX 61

Query: 63  RDNQSTPLTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVGGSSSGSPLAPAGHTQSRP 122
            D ++TPL KLPSLDFNRALQAANQ+SRPDAKISLHPSAQ                    
Sbjct: 62  XDKETTPLNKLPSLDFNRALQAANQHSRPDAKISLHPSAQC------------------- 121

Query: 123 TSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNICTNC 182
                       GLR    Y       SRI G+GSMY HHRAT G RRPGIPHSNICTNC
Sbjct: 122 ------------GLRGGKPYHGG---ESRIGGIGSMYDHHRATAGSRRPGIPHSNICTNC 181

Query: 183 TTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVGCFGW 242
           TTYIY+FRHRCLVCGRVYCRQCVRIGMGEMTEGRKCI+CLGRKFSHRYIG+AGDVGCF W
Sbjct: 182 TTYIYIFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIQCLGRKFSHRYIGKAGDVGCFSW 241

Query: 243 RYSTAVKHAELKWAEKGPRRRGERAPLRG--CGGVTNSMSMMSASQSPWAPATTSVDISA 302
           RYS+AVK AELKWAEKGPRR+GERA  R    GGVTNS+SM S SQSPWAP TTSVD+S 
Sbjct: 242 RYSSAVKQAELKWAEKGPRRKGERALHRRGYGGGVTNSISMTSPSQSPWAPTTTSVDVST 292

Query: 303 VYSSRFAAM--SSPHSPAHRHHLPF 313
           +YSSRFA M  SSPHSP HRHHLPF
Sbjct: 302 IYSSRFAVMSTSSPHSPVHRHHLPF 292

[Close]

BLAST of Carg07013 vs. TrEMBL
Match: tr|B9INL9|B9INL9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G130200v3 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.1e-58
Identity = 153/333 (45.95%), Postives = 189/333 (56.76%), Query Frame = 0


Query: 1   MDDGGGFRKARMELEALYEGVPDESVNLTFRHLT------------DVNVQSRANPSIQI 60
           M D     KARMELE LY G+PD+SVNLTF+ L              +N  +   P  + 
Sbjct: 1   MGDLKTLAKARMELEELYSGIPDDSVNLTFQDLAIHVKQSKNSTPEKINTTTNKEPIQEA 60

Query: 61  PIPRDNQSTPLTKLPSLDFNRALQAANQYSRPDAKISLHPSAQ--VGGSSSGSPLAPAGH 120
             P+  Q +PLTKLPSLDFNR LQA+  + +P      HP  Q            +P G 
Sbjct: 61  KTPK--QVSPLTKLPSLDFNRGLQASKNHQQPRHLAEGHPLGQSHKHNLQHDDTHSPCGT 120

Query: 121 TQSRPTSEHEYMHAHVGGLRP-----ALEYSAAYEEASRISGMGSMYLHHRATPGRRRPG 180
             S    +  + HA++G   P     A E S  +++ S +  M SMY      P  RRPG
Sbjct: 121 IGSYHHDQSNHGHANIGRKGPSKSRFAPERSREFDDVS-VMSMDSMYQERSGRP--RRPG 180

Query: 181 IPHSNICTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIG 240
           IPHSNIC  C+TYIY+FRHRCLVCGRV+CR CV IGMGEMTEGRKCI+CLGR+FS RYI 
Sbjct: 181 IPHSNICAVCSTYIYIFRHRCLVCGRVHCRNCVSIGMGEMTEGRKCIDCLGRRFSQRYIS 240

Query: 241 EAGDVGCFGWRYSTAVKHAELKWAEKGPRRRGERAPLRGCGGVTN-SMSMMSASQSP--W 300
            AG VGC    Y + VK AEL+WAEKGPRR GERA   G G +T+ S + MS    P   
Sbjct: 241 RAGMVGCCS-GYPSDVKQAELRWAEKGPRRAGERA--FGHGNMTSRSRNPMSTPPRPSNK 300

Query: 301 APATTSVDISAVYSSRFAAMSSPHSPAHRHHLP 312
           A  + S D+ +  +S   +  SP+S    H LP
Sbjct: 301 AGVSMSQDLPSFVTS---SPYSPYSTPKHHQLP 322

[Close]

BLAST of Carg07013 vs. TrEMBL
Match: tr|A0A1U8LFV3|A0A1U8LFV3_GOSHI (uncharacterized protein LOC107927026 OS=Gossypium hirsutum OX=3635 GN=LOC107927026 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 139/287 (48.43%), Postives = 171/287 (59.58%), Query Frame = 0


Query: 5   GGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRA-----NPSIQIPIPRDNQSTP- 64
           G   KAR+ELE LY G+PD+SVNLTF+ L D+  ++ A     + S   P+ +DN  TP 
Sbjct: 2   GDLAKARVELEQLYLGIPDDSVNLTFQDLADMKQKASASDNNRSTSAMDPLQQDNTPTPK 61

Query: 65  -----LTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVG------GSSSGSPLAPAGHT 124
                LTKLPSLDF+R LQ AN + +     + +  + VG              +P GHT
Sbjct: 62  QLGSSLTKLPSLDFSRGLQGANHHHKHYVHDTDNFDSHVGMDHHRAWKDQTQRTSPRGHT 121

Query: 125 QSRPTSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNI 184
           + R                    +  +Y++ S IS       ++     RRRPGIPHSNI
Sbjct: 122 EFR--------------------HGVSYDDESVISTAS----NYPERGQRRRPGIPHSNI 181

Query: 185 CTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVG 244
           CT C+TYIY+FRHRCLVCGRVYCRQCV IGMGEM EGRKC+ CLGR+FS RYI  AG +G
Sbjct: 182 CTICSTYIYIFRHRCLVCGRVYCRQCVCIGMGEMAEGRKCVLCLGRRFSPRYIKRAGKMG 241

Query: 245 CFGWRYSTAVKHAELKWAEKGPRRRGERAPLRGCGGVTNSMSMMSAS 275
           C  WRY + VK AELKWAEKGPRR GERA     G  T ++SMMS S
Sbjct: 242 CC-WRYPSMVKQAELKWAEKGPRRSGERAD----GRSTVTLSMMSRS 259

[Close]

BLAST of Carg07013 vs. TrEMBL
Match: tr|A0A0D2MPA6|A0A0D2MPA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G152600 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 140/287 (48.78%), Postives = 171/287 (59.58%), Query Frame = 0


Query: 5   GGFRKARMELEALYEGVPDESVNLTFRHLTDVNVQSRA-----NPSIQIPIPRDNQSTP- 64
           G   KAR+ELE LY G+PD+SVNLTF+ L D+  ++ A     + S   P+ +DN  TP 
Sbjct: 2   GDLAKARVELEQLYLGIPDDSVNLTFQDLADMKQKASASDNKRSTSAMDPLQQDNAPTPK 61

Query: 65  -----LTKLPSLDFNRALQAANQYSRPDAKISLHPSAQVG------GSSSGSPLAPAGHT 124
                LTKLPSLDF+R LQ  N + +     + +  + +G              +P GHT
Sbjct: 62  QLGSSLTKLPSLDFSRGLQGTNHHHKHYVHDTDNFDSHMGMDHHRAWKDQTQRTSPRGHT 121

Query: 125 QSRPTSEHEYMHAHVGGLRPALEYSAAYEEASRISGMGSMYLHHRATPGRRRPGIPHSNI 184
           + R                    +  +Y++ S IS M S Y        RRRPGIPHSNI
Sbjct: 122 EFR--------------------HGVSYDDVSVIS-MASNYPERGQ---RRRPGIPHSNI 181

Query: 185 CTNCTTYIYVFRHRCLVCGRVYCRQCVRIGMGEMTEGRKCIECLGRKFSHRYIGEAGDVG 244
           CT C+TYIY+FRHRCLVCGRVYCRQCV IGMGEM EGRKC+ CLGR+FS RYI  AG +G
Sbjct: 182 CTICSTYIYIFRHRCLVCGRVYCRQCVCIGMGEMAEGRKCVLCLGRRFSPRYIKRAGKMG 241

Query: 245 CFGWRYSTAVKHAELKWAEKGPRRRGERAPLRGCGGVTNSMSMMSAS 275
           C  WRY + VK AELKWAEKGPRR GERA     G  T ++SMMS S
Sbjct: 242 CC-WRYPSMVKQAELKWAEKGPRRSGERAD----GRSTVTLSMMSRS 259

The following BLAST results are available for this feature:

BLAST of Carg07013 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948781.1	1.9e-168	93.40	extra-large guanine nucleotide-binding protein 3-like [Cucurbita moschata] >XP_0...	[more]
XP_023521176.1	5.9e-146	98.84	uncharacterized protein LOC111784864 [Cucurbita pepo subsp. pepo]	[more]
XP_022997719.1	3.8e-145	86.23	uncharacterized protein LOC111492594 [Cucurbita maxima]	[more]
XP_008457288.1	2.1e-135	79.45	PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Cucumis melo]	[more]
XP_023521181.1	4.0e-118	98.16	uncharacterized protein LOC111784869 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07013 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31930.1	1.1e-05	41.30	extra-large GTP-binding protein 3	[more]
AT2G23460.1	1.9e-05	46.51	extra-large G-protein 1	[more]
AT4G34390.1	3.3e-05	35.37	extra-large GTP-binding protein 2	[more]

BLAST of Carg07013 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C516\|XLG3_ARATH	2.0e-04	41.30	Extra-large guanine nucleotide-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|O80462\|XLG1_ARATH	3.4e-04	46.51	Extra-large guanine nucleotide-binding protein 1 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|C6KIE6\|XLG2_ARATH	5.9e-04	35.37	Extra-large guanine nucleotide-binding protein 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Carg07013 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C6F3\|A0A1S3C6F3_CUCME	1.4e-135	79.45	extra-large guanine nucleotide-binding protein 3-like OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LPU0\|A0A0A0LPU0_CUCSA	3.6e-115	69.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G026000 PE=4 SV=1	[more]
tr\|B9INL9\|B9INL9_POPTR	3.1e-58	45.95	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G130200v3 PE=...	[more]
tr\|A0A1U8LFV3\|A0A1U8LFV3_GOSHI	1.5e-57	48.43	uncharacterized protein LOC107927026 OS=Gossypium hirsutum OX=3635 GN=LOC1079270...	[more]
tr\|A0A0D2MPA6\|A0A0D2MPA6_GOSRA	1.5e-57	48.78	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G152600 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07013-RA	Carg07013-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..118
None	No IPR available	PANTHER	PTHR36486	FAMILY NOT NAMED	coord: 8..312
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	SSF57903	FYVE/PHD zinc finger	coord: 165..211

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07013	Cla008098	Watermelon (97103) v1	carwmB0515
Carg07013	Csa1G026000	Cucumber (Chinese Long) v2	carcuB0549
Carg07013	MELO3C020485	Melon (DHL92) v3.5.1	carmeB0522
Carg07013	CSPI01G04780	Wild cucumber (PI 183967)	carcpiB0556
Carg07013	Cucsa.111950	Cucumber (Gy14) v1	carcgyB0597
Carg07013	CmaCh01G007330	Cucurbita maxima (Rimu)	carcmaB0731
Carg07013	CmoCh01G007620	Cucurbita moschata (Rifu)	carcmoB0708
Carg07013	Lsi02G012080	Bottle gourd (USVL1VR-Ls)	carlsiB472
Carg07013	Cp4.1LG02g11290	Cucurbita pepo (Zucchini)	carcpeB0738
Carg07013	Cp4.1LG00g04350	Cucurbita pepo (Zucchini)	carcpeB0731
Carg07013	CsGy1G004670	Cucumber (Gy14) v2	carcgybB0526
Carg07013	MELO3C020485.2	Melon (DHL92) v3.6.1	carmedB0528
Carg07013	CsaV3_1G004770	Cucumber (Chinese Long) v3	carcucB0555
Carg07013	Cla97C03G050870	Watermelon (97103) v2	carwmbB0545
Carg07013	Bhi08G000348	Wax gourd	carwgoB0630

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07013	Cucurbita maxima (Rimu)	carcmaB0728
Carg07013	Cucurbita moschata (Rifu)	carcmoB0705
Carg07013	Cucurbita pepo (Zucchini)	carcpeB0737
Carg07013	Watermelon (Charleston Gray)	carwcgB0504