Carg06923 (gene) Silver-seed gourd

Overview
NameCarg06923
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLipoxygenase
LocationCucurbita_argyrosperma_scaffold_065 : 331201 .. 332255 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCGGCGAACCCAGGGAAGAAAGACAAGCTGGGATCAAAGCCTTTCTCGGATTTCACTCAGATTGACCTAATGTTCCGAGATGGCATTGAGATCCCCCCCGCCCCTCACGAAATTCTTCGCTTTAATATTTCCTCCACTCTTTCCACCATGCATGCCCCACCCTTTGTTGACCCTTCTACCCTTCAGCCCCAGCCTGCTCGATTGGTTAAATTCCCACCACCCGAGGCTCTCAAGAGTGAGTCCACGCCTACTTTTCTTTTTTTTTTTTTGGGTTGGGGAGGGGGGGGTGTGTATTAATGGAGCTTACCAAACAAATGCATTTTCCTCACAATTACTTCAATTTTTCCCAGGAGACAAGTTCAATTGGCTGAGTGACAGCGAGTTTGCAAGACAGACACTCGCTGGTCTCAACCCCTACAGCATTCAGCTGGTCAAGGTCACTCACAACTTCACCATCAATCCATTAATCTCTCTCTTTCTATAATATGCAAAACTCGCTTAATTTTGTCCTCATACATTCAGAGTTTGCCTTTGATGAGTGAGCTGAACCCCAAGGATTATGGACCTCAAGAATCAGGATTCACCACCGAATTGGTTCAAAAATTAATCGGATGCTCCATCACTGTTGAAGAGGTAAAATTGATTAAACCCAACGTGCTATAAGTTACTAAATTAGAGAAGAAAAAAAATAAAAAAATAAAAAATAAAAAAAGAGAATTTTGTGAGTTTATGCAGGCATTAGCACACAAGAAATTGTTCGTACTGGATTACCATGACACTTTAATGCAATATGTAACCAAAGTAAGAAGCATTAAGCGGACGACACTGTATGGATCAAGGACATTGTTCTTCCTAAACTCAGATGACACTTTGACGCCGTTGGGTATTGAGCTAACTCGGCCGCCAATGGATGGGAAGCCCCAATGGAAACAAGTTTTTTCCCCAAGCACTCATGCCACTGATGCCTGGCTATGGAGGCTCGCTAAAGCCCACGTTCTTGCTCATGATTCTTGCGTTCACCAACTCGTTATTCATTGGTACAGGGCTAA

mRNA sequence

ATGTTTCCGGCGAACCCAGGGAAGAAAGACAAGCTGGGATCAAAGCCTTTCTCGGATTTCACTCAGATTGACCTAATGTTCCGAGATGGCATTGAGATCCCCCCCGCCCCTCACGAAATTCTTCGCTTTAATATTTCCTCCACTCTTTCCACCATGCATGCCCCACCCTTTGTTGACCCTTCTACCCTTCAGCCCCAGCCTGCTCGATTGGTTAAATTCCCACCACCCGAGGCTCTCAAGAGAGACAAGTTCAATTGGCTGAGTGACAGCGAGTTTGCAAGACAGACACTCGCTGGTCTCAACCCCTACAGCATTCAGCTGGTCAAGAGTTTGCCTTTGATGAGTGAGCTGAACCCCAAGGATTATGGACCTCAAGAATCAGGATTCACCACCGAATTGGTTCAAAAATTAATCGGATGCTCCATCACTGTTGAAGAGGGCTAA

Coding sequence (CDS)

ATGTTTCCGGCGAACCCAGGGAAGAAAGACAAGCTGGGATCAAAGCCTTTCTCGGATTTCACTCAGATTGACCTAATGTTCCGAGATGGCATTGAGATCCCCCCCGCCCCTCACGAAATTCTTCGCTTTAATATTTCCTCCACTCTTTCCACCATGCATGCCCCACCCTTTGTTGACCCTTCTACCCTTCAGCCCCAGCCTGCTCGATTGGTTAAATTCCCACCACCCGAGGCTCTCAAGAGAGACAAGTTCAATTGGCTGAGTGACAGCGAGTTTGCAAGACAGACACTCGCTGGTCTCAACCCCTACAGCATTCAGCTGGTCAAGAGTTTGCCTTTGATGAGTGAGCTGAACCCCAAGGATTATGGACCTCAAGAATCAGGATTCACCACCGAATTGGTTCAAAAATTAATCGGATGCTCCATCACTGTTGAAGAGGGCTAA

Protein sequence

MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTELVQKLIGCSITVEEG
Homology
[Close]
BLAST of Carg06923 vs. NCBI nr
Match: XP_022943470.1 (lipoxygenase 7, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 8.6e-79
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 60
           MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP
Sbjct: 254 MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 313

Query: 61  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 120
           STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK
Sbjct: 314 STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 373

Query: 121 DYGPQESGFTTELVQKLIGCSITVEE 147
           DYGPQESGFTTELVQKLIGCSITVEE
Sbjct: 374 DYGPQESGFTTELVQKLIGCSITVEE 399

[Close]
BLAST of Carg06923 vs. NCBI nr
Match: XP_022943469.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 8.6e-79
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 60
           MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP
Sbjct: 254 MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 313

Query: 61  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 120
           STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK
Sbjct: 314 STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 373

Query: 121 DYGPQESGFTTELVQKLIGCSITVEE 147
           DYGPQESGFTTELVQKLIGCSITVEE
Sbjct: 374 DYGPQESGFTTELVQKLIGCSITVEE 399

[Close]
BLAST of Carg06923 vs. NCBI nr
Match: XP_022985897.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 301.2 bits (770), Expect = 1.9e-78
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 60
           MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP
Sbjct: 250 MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 309

Query: 61  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 120
           STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK
Sbjct: 310 STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 369

Query: 121 DYGPQESGFTTELVQKLIGCSITVEE 147
           DYGPQESGFTT+LVQKLIGCSITVEE
Sbjct: 370 DYGPQESGFTTQLVQKLIGCSITVEE 395

[Close]
BLAST of Carg06923 vs. NCBI nr
Match: XP_023513406.1 (linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.9 bits (764), Expect = 9.5e-78
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 60
           MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP
Sbjct: 254 MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 313

Query: 61  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 120
           ST+QPQPARLVKFPPPEALKRDKFNWLSD EFARQTLAGLNPYSIQLVKSLPLMSELNPK
Sbjct: 314 STVQPQPARLVKFPPPEALKRDKFNWLSDIEFARQTLAGLNPYSIQLVKSLPLMSELNPK 373

Query: 121 DYGPQESGFTTELVQKLIGCSITVEE 147
           DYGPQESGFTTELVQKLIGCSITVEE
Sbjct: 374 DYGPQESGFTTELVQKLIGCSITVEE 399

[Close]
BLAST of Carg06923 vs. NCBI nr
Match: KGN54123.1 (hypothetical protein Csa_4G286960 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 114/148 (77.03%), Postives = 124/148 (83.78%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTL--STMHAPPFV 60
           MFP+NPGKKDKLG+KPF+DFTQIDLMFRDGI  P  PHEIL+FNI STL  S   APP V
Sbjct: 164 MFPSNPGKKDKLGAKPFTDFTQIDLMFRDGIAPPSNPHEILQFNIISTLNASNQPAPPPV 223

Query: 61  DPSTLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELN 120
            P  +QP    ++KFPPPEALKRDKFNWLSDSEFARQT+AGLNPY IQLVKS PL SEL+
Sbjct: 224 QPIPVQPN-TPVIKFPPPEALKRDKFNWLSDSEFARQTIAGLNPYCIQLVKSWPLKSELD 283

Query: 121 PKDYGPQESGFTTELVQKLIGCSITVEE 147
           P +YGPQES FTTELVQKLIG SITVEE
Sbjct: 284 PVEYGPQESAFTTELVQKLIGSSITVEE 310

[Close]
BLAST of Carg06923 vs. TAIR10
Match: AT1G17420.1 (lipoxygenase 3)

HSP 1 Score: 91.3 bits (225), Expect = 5.4e-19
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 0 

Query: 6   PGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQP 65
           P  K  + ++ F+DF +ID ++++G+        +L+      +      P V   TLQ 
Sbjct: 347 PSLKASIVAEDFADFGEIDRLYKEGL--------LLKLGFQDDIFKKFPLPKVVVDTLQE 406

Query: 66  QPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQ 125
               L+K+  P+ L +DK  WL D EFARQ +AG+NP +I+ VK+ P +S L+PK YGPQ
Sbjct: 407 STKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDPKIYGPQ 466

Query: 126 ESGFTTE-LVQKLIGCSI 143
            S  T + ++  L G S+
Sbjct: 467 HSALTDDHIIGHLDGFSV 476

[Close]
BLAST of Carg06923 vs. TAIR10
Match: AT3G45140.1 (lipoxygenase 2)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18
Identity = 50/132 (37.88%), Postives = 76/132 (57.58%), Query Frame = 0 

Query: 15  KPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQPQPARLVKFP 74
           +PF  F  I  +F +GI++P                 +   P +  +  + Q   +++F 
Sbjct: 336 EPFPHFKAIQNLFEEGIQLP------------KDAGLLPLLPRIIKALGEAQD-DILQFD 395

Query: 75  PPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTELV 134
            P  + RD+F+WL D EFARQTLAGLNPYSIQLV+  PL+S+L+P  YG   S  T E+V
Sbjct: 396 APVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIV 454

Query: 135 QKLIGCSITVEE 147
           ++ +  ++TV+E
Sbjct: 456 EREVKGNMTVDE 454

[Close]
BLAST of Carg06923 vs. TAIR10
Match: AT1G67560.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.8e-15
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 0 

Query: 70  LVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGF 129
           L+K+  P  +K D+F WL D+EF RQ LAG+NP +I+L+K LP+ S L+P  YGPQES  
Sbjct: 397 LLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVL 456

Query: 130 TTELVQK 137
           T E++ +
Sbjct: 457 TEEIIAR 463

[Close]
BLAST of Carg06923 vs. TAIR10
Match: AT1G72520.1 (PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 42/139 (30.22%), Postives = 77/139 (55.40%), Query Frame = 0 

Query: 6   PGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQP 65
           P  K  + ++ F++F +ID ++++G+        +L+      +      P +  +TLQ 
Sbjct: 353 PSLKASILAEDFANFGEIDSLYKEGL--------LLKLGFQDDMFKKFPLPKI-VTTLQK 412

Query: 66  QPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQ 125
               L+++  P+ + +DK+ WL D EFARQ +AG+NP +I+ V S P +S L+P+ YGP 
Sbjct: 413 SSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYGPG 472

Query: 126 ESGFTTE--LVQKLIGCSI 143
                TE  ++ +L G ++
Sbjct: 473 LHSALTEDHIIGQLDGLTV 482

[Close]
BLAST of Carg06923 vs. TAIR10
Match: AT1G55020.1 (lipoxygenase 1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 0 

Query: 15  KPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQPQPARLVKFP 74
           K F  F  +  ++ +GI++   P++ L  +I   +     P  +     +    + +KFP
Sbjct: 297 KEFDSFEDVLKIYEEGIDL---PNQALIDSIVKNI-----PLEMLKEIFRTDGQKFLKFP 356

Query: 75  PPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTELV 134
            P+ +K DK  W +D EFAR+ LAGLNP  IQL+K  P  S+L+ + YG Q S  T   +
Sbjct: 357 VPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTITKSHI 416

Query: 135 QKLIGCSITVEE 147
           +  +   +TVEE
Sbjct: 417 EHNLD-GLTVEE 419

[Close]
BLAST of Carg06923 vs. Swiss-Prot
Match: sp|P38419|LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20
Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 0 

Query: 16  PFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQPQPA-RLVKFP 75
           PF  F  ID +F DG+E+P     + + N   ++     P  ++   L+  PA ++++F 
Sbjct: 360 PFPSFFVIDKLFEDGVELP----GVDKLNFLESV----VPRLLE--HLRDTPAEKILRFE 419

Query: 76  PPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTELV 135
            P  +++DKF WL D EFAR+TLAG+NPY+I+LV+  PL S+L+P  YGP ES  T +L+
Sbjct: 420 TPANIQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITADLL 479

Query: 136 QKLIGCSITVEE 147
           ++ +   +TVEE
Sbjct: 480 EEQMRRVMTVEE 481

[Close]
BLAST of Carg06923 vs. Swiss-Prot
Match: sp|Q8GSM2|LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-20
Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 0 

Query: 14  SKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQPQPARLVKF 73
           S  FS F  ID ++ DGI +P   H    FN+ + +     P  V    ++     +++F
Sbjct: 330 SHGFSHFPAIDALYSDGIPLPVDGHGGNSFNVINDV----IPRVV--QMIEDTTEHVLRF 389

Query: 74  PPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTEL 133
             PE L+RD+F+W  D EFARQTLAGLNP  I+ +   P++S+L+P  YGP ES  + E+
Sbjct: 390 EVPEMLERDRFSWFRDEEFARQTLAGLNPICIRRLTEFPIVSKLDPAVYGPAESALSKEI 449

Query: 134 VQKLIGCSITVEE 147
           ++K++   +TVEE
Sbjct: 450 LEKMMNGRMTVEE 456

[Close]
BLAST of Carg06923 vs. Swiss-Prot
Match: sp|O24370|LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 0 

Query: 17  FSDFTQIDLMFRDGIEIPP-APHEILRFNISSTLSTMHAPPFVDPSTLQPQPARLVKFPP 76
           F  F  ID +F  G+++P     +   FN+   L             +      ++ F  
Sbjct: 336 FPHFPAIDSLFNVGVDLPGLGDKKSGLFNVVPRLI----------KAISDTRKDVLLFES 395

Query: 77  PEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTELVQ 136
           P+ ++RDKF+W  D EFARQTLAGLNPYSI+LV   PL S+L+PK YGP ES  T EL++
Sbjct: 396 PQLVQRDKFSWFRDVEFARQTLAGLNPYSIRLVTEWPLRSKLDPKVYGPPESEITKELIE 455

Query: 137 KLIGCSITVEE 147
           K IG  +TVE+
Sbjct: 456 KEIGNYMTVEQ 456

[Close]
BLAST of Carg06923 vs. Swiss-Prot
Match: sp|Q84YK8|LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-19
Identity = 53/134 (39.55%), Postives = 80/134 (59.70%), Query Frame = 0 

Query: 16  PFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHA--PPFVDPSTLQPQPA-RLVK 75
           PF  F  ID +F DG+E+P              L  +H+  P  ++   L+  P  +++ 
Sbjct: 377 PFPSFFVIDKLFEDGVELPGV----------EKLGFLHSIVPRLLE--LLRDSPGDKILL 436

Query: 76  FPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQESGFTTE 135
           F  P  +++DKF WL D EFAR+TLAG+NPY+I+LV+  PL S+L+P  YGP ES  T +
Sbjct: 437 FDTPANVQKDKFAWLRDEEFARETLAGINPYAIELVREFPLKSKLDPAVYGPAESAITAD 496

Query: 136 LVQKLIGCSITVEE 147
           L+++ +   +TVEE
Sbjct: 497 LLEEQMRRVMTVEE 498

[Close]
BLAST of Carg06923 vs. Swiss-Prot
Match: sp|Q9LNR3|LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX3 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.8e-18
Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 0 

Query: 6   PGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDPSTLQP 65
           P  K  + ++ F+DF +ID ++++G+        +L+      +      P V   TLQ 
Sbjct: 347 PSLKASIVAEDFADFGEIDRLYKEGL--------LLKLGFQDDIFKKFPLPKVVVDTLQE 406

Query: 66  QPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPKDYGPQ 125
               L+K+  P+ L +DK  WL D EFARQ +AG+NP +I+ VK+ P +S L+PK YGPQ
Sbjct: 407 STKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDPKIYGPQ 466

Query: 126 ESGFTTE-LVQKLIGCSI 143
            S  T + ++  L G S+
Sbjct: 467 HSALTDDHIIGHLDGFSV 476

[Close]
BLAST of Carg06923 vs. TrEMBL
Match: tr|A0A0A0KX68|A0A0A0KX68_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286960 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.7e-56
Identity = 114/148 (77.03%), Postives = 124/148 (83.78%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTL--STMHAPPFV 60
           MFP+NPGKKDKLG+KPF+DFTQIDLMFRDGI  P  PHEIL+FNI STL  S   APP V
Sbjct: 164 MFPSNPGKKDKLGAKPFTDFTQIDLMFRDGIAPPSNPHEILQFNIISTLNASNQPAPPPV 223

Query: 61  DPSTLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELN 120
            P  +QP    ++KFPPPEALKRDKFNWLSDSEFARQT+AGLNPY IQLVKS PL SEL+
Sbjct: 224 QPIPVQPN-TPVIKFPPPEALKRDKFNWLSDSEFARQTIAGLNPYCIQLVKSWPLKSELD 283

Query: 121 PKDYGPQESGFTTELVQKLIGCSITVEE 147
           P +YGPQES FTTELVQKLIG SITVEE
Sbjct: 284 PVEYGPQESAFTTELVQKLIGSSITVEE 310

[Close]
BLAST of Carg06923 vs. TrEMBL
Match: tr|A0A1S4DXN5|A0A1S4DXN5_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107991008 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-54
Identity = 108/146 (73.97%), Postives = 123/146 (84.25%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 60
           MFP NPGKKDKLG+KPF+DFTQIDLMFRDGI  P  PHEIL+FNI STL+  + P  V P
Sbjct: 1   MFPTNPGKKDKLGAKPFTDFTQIDLMFRDGIAPPSNPHEILQFNIISTLNASNQPS-VQP 60

Query: 61  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 120
           + +QP    ++KFPPPEALKRDKFNWLSD EFARQT+AGLNPY IQLVKS PL SEL+P+
Sbjct: 61  TPVQPD-TPVIKFPPPEALKRDKFNWLSDGEFARQTIAGLNPYCIQLVKSWPLKSELDPE 120

Query: 121 DYGPQESGFTTELVQKLIGCSITVEE 147
           +YGPQES FTT+LVQKLIG S+TVEE
Sbjct: 121 EYGPQESAFTTDLVQKLIGSSLTVEE 144

[Close]
BLAST of Carg06923 vs. TrEMBL
Match: tr|A0A0A0L1U9|A0A0A0L1U9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286940 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.3e-38
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 0 

Query: 1   MFPANPGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTL--STMHAPPFV 60
           MFP+N G KDKLG+KPF+DFTQIDLMFRDGI +P  PHEIL+FNI STL  S   APP V
Sbjct: 144 MFPSNSGNKDKLGTKPFTDFTQIDLMFRDGIALPSNPHEILQFNILSTLNASNQPAPPPV 203

Query: 61  DPSTLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKS 111
            P  +QP    ++KFPPPEALKRDKFNWLSDSEFARQT+AGLNPY IQLVK+
Sbjct: 204 QPIPVQPN-TPVIKFPPPEALKRDKFNWLSDSEFARQTIAGLNPYCIQLVKT 254

[Close]
BLAST of Carg06923 vs. TrEMBL
Match: tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 78/146 (53.42%), Postives = 105/146 (71.92%), Query Frame = 0 

Query: 2   FPAN-PGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 61
           FP++ P  KD LG   F D   I+ MFR+GI+ P APH++L+FN+S+ ++  H P     
Sbjct: 245 FPSSEPDNKDLLGKNSFHDLPHIESMFREGIKAPDAPHKLLKFNLSTIVTPDHKPDLHSN 304

Query: 62  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 121
           S++   P+ L+ +PPPE+ +RD+++WLSD+EFARQTLAGLNPYSIQLV  LPLMSEL+P+
Sbjct: 305 SSV---PSSLLHYPPPESYRRDRYSWLSDTEFARQTLAGLNPYSIQLVTRLPLMSELDPE 364

Query: 122 DYGPQESGFTTELVQKLIGCSITVEE 147
            YGPQES F    VQ+L+GC   V E
Sbjct: 365 IYGPQESAFNHTKVQELLGCFNEVNE 387

[Close]
BLAST of Carg06923 vs. TrEMBL
Match: tr|A0A0A0L1V5|A0A0A0L1V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-36
Identity = 80/146 (54.79%), Postives = 105/146 (71.92%), Query Frame = 0 

Query: 2   FPAN-PGKKDKLGSKPFSDFTQIDLMFRDGIEIPPAPHEILRFNISSTLSTMHAPPFVDP 61
           FP++ P  KD LG   FSD   I+ MFR+GI+ P APH++L FN+S+ ++     P +  
Sbjct: 155 FPSSEPDNKDLLGKDSFSDLPHIESMFREGIKAPHAPHKLLTFNLSTIVTP--DKPDLHS 214

Query: 62  STLQPQPARLVKFPPPEALKRDKFNWLSDSEFARQTLAGLNPYSIQLVKSLPLMSELNPK 121
           ++    P+ L+ +PPPE+ +RD+++WLSD+EFARQTLAGLNPYSIQLV  LPLMSEL+P 
Sbjct: 215 NSNSSVPSSLLHYPPPESYRRDRYSWLSDTEFARQTLAGLNPYSIQLVTRLPLMSELDPD 274

Query: 122 DYGPQESGFTTELVQKLIGCSITVEE 147
            YGPQES F    VQ+LIGCSI V E
Sbjct: 275 TYGPQESAFNHTKVQELIGCSIEVNE 298

The following BLAST results are available for this feature:
BLAST of Carg06923 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022943470.18.6e-79100.00lipoxygenase 7, chloroplastic-like isoform X2 [Cucurbita moschata][more]
XP_022943469.18.6e-79100.00linoleate 13S-lipoxygenase 2-1, chloroplastic-like isoform X1 [Cucurbita moschat... [more]
XP_022985897.11.9e-7899.32linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita maxima][more]
XP_023513406.19.5e-7898.63linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
KGN54123.11.0e-5577.03hypothetical protein Csa_4G286960 [Cucumis sativus][more]
BLAST of Carg06923 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17420.15.4e-1935.51lipoxygenase 3[more]
AT3G45140.12.7e-1837.88lipoxygenase 2[more]
AT1G67560.14.8e-1550.75PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G72520.11.4e-1430.22PLAT/LH2 domain-containing lipoxygenase family protein[more]
AT1G55020.11.2e-1333.33lipoxygenase 1[more]
BLAST of Carg06923 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P38419|LOXC1_ORYSJ2.8e-2040.15Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CM-LOX... [more]
sp|Q8GSM2|LOX23_HORVU3.6e-2039.10Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare OX=4513 GN=LOX2.3 PE=1 SV=1[more]
sp|O24370|LOX21_SOLTU1.0e-1941.98Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum OX=4113 GN=LO... [more]
sp|Q84YK8|LOXC2_ORYSJ1.8e-1939.55Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9LNR3|LOX3_ARATH9.8e-1835.51Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LOX3 PE=2 SV=1[more]
BLAST of Carg06923 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KX68|A0A0A0KX68_CUCSA6.7e-5677.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286960 PE=4 SV=1[more]
tr|A0A1S4DXN5|A0A1S4DXN5_CUCME2.2e-5473.97Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC107991008 PE=3 SV=1[more]
tr|A0A0A0L1U9|A0A0A0L1U9_CUCSA8.3e-3873.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G286940 PE=4 SV=1[more]
tr|A0A1S3BNQ1|A0A1S3BNQ1_CUCME2.7e-3653.42Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103491544 PE=3 SV=1[more]
tr|A0A0A0L1V5|A0A0A0L1V5_CUCSA2.7e-3654.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G287530 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016702oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Vocabulary: INTERPRO
TermDefinition
IPR036226LipOase_C_sf
IPR000907LipOase
IPR013819LipOase_C
IPR027433Lipoxygenase_dom_3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06923-RACarg06923-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027433Lipoxygenase, domain 3GENE3DG3DSA:4.10.372.10coord: 8..102
e-value: 6.4E-17
score: 63.7
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 14..146
e-value: 4.9E-26
score: 91.2
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 1..147
score: 26.855
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 16..146
NoneNo IPR availablePANTHERPTHR11771:SF65SUBFAMILY NOT NAMEDcoord: 16..146
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILYSSF48484Lipoxigenasecoord: 14..146

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06923Csa4G288110Cucumber (Chinese Long) v2carcuB0552
Carg06923MELO3C014635Melon (DHL92) v3.5.1carmeB0528
Carg06923ClCG02G023600Watermelon (Charleston Gray)carwcgB0503
Carg06923CSPI04G13440Wild cucumber (PI 183967)carcpiB0559
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06923Silver-seed gourdcarcarB209
Carg06923Silver-seed gourdcarcarB381
Carg06923Silver-seed gourdcarcarB452
Carg06923Silver-seed gourdcarcarB463
Carg06923Silver-seed gourdcarcarB498
Carg06923Cucumber (Gy14) v2carcgybB0527
Carg06923Cucumber (Gy14) v2carcgybB0529
Carg06923Cucumber (Gy14) v1carcgyB0593
Carg06923Cucumber (Gy14) v1carcgyB0599
Carg06923Cucumber (Gy14) v1carcgyB0603
Carg06923Cucurbita maxima (Rimu)carcmaB0726
Carg06923Cucurbita maxima (Rimu)carcmaB0730
Carg06923Cucurbita maxima (Rimu)carcmaB0732
Carg06923Cucurbita maxima (Rimu)carcmaB0733
Carg06923Cucurbita maxima (Rimu)carcmaB0734
Carg06923Cucurbita moschata (Rifu)carcmoB0703
Carg06923Cucurbita moschata (Rifu)carcmoB0704
Carg06923Cucurbita moschata (Rifu)carcmoB0707
Carg06923Cucurbita moschata (Rifu)carcmoB0709
Carg06923Cucurbita moschata (Rifu)carcmoB0710
Carg06923Cucurbita moschata (Rifu)carcmoB0711
Carg06923Cucurbita pepo (Zucchini)carcpeB0732
Carg06923Cucurbita pepo (Zucchini)carcpeB0733
Carg06923Cucurbita pepo (Zucchini)carcpeB0734
Carg06923Cucurbita pepo (Zucchini)carcpeB0735
Carg06923Cucurbita pepo (Zucchini)carcpeB0741
Carg06923Wild cucumber (PI 183967)carcpiB0558
Carg06923Wild cucumber (PI 183967)carcpiB0561
Carg06923Cucumber (Chinese Long) v2carcuB0554
Carg06923Cucumber (Chinese Long) v3carcucB0557
Carg06923Cucumber (Chinese Long) v3carcucB0559
Carg06923Cucumber (Chinese Long) v3carcucB0561
Carg06923Bottle gourd (USVL1VR-Ls)carlsiB471
Carg06923Bottle gourd (USVL1VR-Ls)carlsiB473
Carg06923Melon (DHL92) v3.5.1carmeB0526
Carg06923Melon (DHL92) v3.6.1carmedB0532
Carg06923Melon (DHL92) v3.6.1carmedB0533
Carg06923Watermelon (97103) v1carwmB0516
Carg06923Watermelon (97103) v1carwmB0520
Carg06923Watermelon (97103) v2carwmbB0543
Carg06923Wax gourdcarwgoB0629
Carg06923Wax gourdcarwgoB0634