Carg05046 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05046
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SAM domain protein
Location	Cucurbita_argyrosperma_scaffold_060 : 1032877 .. 1037435 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCTAATGTTCTTTCTCTTTCTATTTCTGAAATTAAGAAAAGAGGTTAAAAGCTAAAAAGATTTTGGAGACGAATTGGACTGTAATTCATTGGAAGAGGACAAAAAGGTTTAGCTGCGAACGAAGGAAAATAAAAAAAGCCCCCAAATCTGGAGTTCCTTCTGTTCTTTCGATTTCTTCAGCCTTCAATTCATTCTTGAATTTTGTACGAGCACACCTGCCTCAGATTTTGCTCTCGAAACGGGATTTAGGGTTAGGGTTAGGGTTGAGTTTTTGCGTCTCTCGTTTAGTTCTAAAGATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGTTCGTTGTCTTTTTTTTTTTTTCCTATCTGTTTGGATTTTTGGGCAATTTTTGAGATGTAGGTAGTAATTGTTTTTGGAATTTTTACTGTTGTTTGTGTTACTCTTAAATTTTTGTACTATGGTGGAGTCGCGAGCTAAGACATTTTGGTTGTGGAGTTTATCATTGGTTGAACTTACTGGTTTTTGCGATTTTACTTAAGACTGAAGGTGTTGCCTATTTTGGGTGTAACTTTGCTGTTCTTCTTGTTCGAGTTGTTTTTGGAATCTTGTAGATTGTATGTATTTAGAGCACCTTCAGCTATTACAACTTAGATGGAATGCAGTGAGGACTGTTTGGTTACATTAAGCCATCAATCTTCTTTGGTGTATTTGTTCTGTTTCTGTGCTTGTTGGTTTGGCTTCATGACTTTATGTAGTTTCCTAGCTTAAGTCTTGTTTTCTATCCAAGTAGGAGTTCCAAGATTATATGCTACGGCTTTGTTACAAATTTGTTATATAGGTTTAATGTGCAATTGGATTTTGGCAATGCCGAGAACTAACTTGGTGGATCTAGCATATATTATTTGTCAAAGATCTTGAATGGTTAGGCTTTTATGCTTATTTGGTGCTTCTTTAGGGTGTAAGTGGTTCGGGTAGCTCGGTTTTTTTGGCTAAAAACAATACTGATTCAGGTGGGGAAAAAACTGAATGAAAATGGGCTTTCCTTGAAAGTTGAACTGACTGCTCAAACAAAAAGAAACTTGGGTGCAGTGTGCAACCAAATAAAAAACCAATTAAGACAAGAAAATCTAACACAACAAAGATATTCACAGTTTTAACTTATGTATAGTAGAATCGACCAACACTTATTAACCATACCAATAAAACCGGTTCCCGGTTTATTAAATTTTCTTTTCAGTTTTAAATTTGCTCCTCTAGTTCTCTAGGAACGGTCATTCTCTTATAGTATTCTAGCTTCTCAATGAAAGCCTCATTTTCCATCCAAGAAAAAGCGACCTTCAAGATCATGCTTGAGCATCGGTACTCATTCTTTACATATGATGATAGTGGACTTACCATGCTGGAAACTAATTTGATTGATACTAGCATAGGTTATTTTATACAGCGTTTGAAGATTGTTGAAGCTTTTCTTGTATTTGGTGCTTACGAGTGTGCTTTCTTTCATTGATTTTTAGACGCATGTTGTCTTGTTGCTTTCATTTTTTAATTGAGATAGGAATTTGTGATTTTTTTTTTTATAAGTTTAGGCATTTGGTTTTCTGAAGTTGCCTTAATGATGTGGATGGCCGTCAATATTCATTTACCTTTTTGTGAGAATATTTGATTATCTTGTTAGCTGGACAGTTAATGGTCTACATGTTATTATTTGTTGAGTGCTCTGTATTCATTATATCATGCCGATACCATGTACATTCCAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAGTACGAATTGGGTGTAATTGTATCACACGTCTAAAACCCTTTTGTTAGATGGGTCTAATCCACTTTATAAGCTCTTGATTATGTTCTATTGGCTTTAAAGATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAGTTTTTATTAGAAAATATTCTTTCTGTCAAACGCACGATAGAGGTTGGTCATTTTAGCATTCAATTTTTGTACCTGGAAAACTTTCTTATCTGTGAAAATAATTTCTTTGAACGTTCATAGTCATTGAGAAGACTTCAGGAAGTTATTTGTTTAAGTACACCATTTTCTTATATTTACTTTTTTGCTTCATTGGCTTTTATTCTGTTGGAGCCCCTCCATCAGCCCTTCATGATATTCAGATTAGTGCATCTGGTACAGTCTACATATCTCTTAATCCCTTTTGCTGCTTTGCTAATGAGTTGCAGAGACGTTCAGCCAAATGCATGTTATGTCTCGACATCTTTAGTTGAATTAAAATTTAATCGAGTTGTAGTAACCGGACTTGGAATTACCGACCTTATGTTATAGTTGATGGGCTGAGTTACCATGCGAACAATTGAAAGTCTGACGTTTTGTTTTCTACAATTTGTCTTTCCTTGATTAACATGACTTTTGATGCAGAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTATGAAAATCTTATGTTTTCAAGGATTGTAAGCTCCTTGCTTTCAAGCTTTCGGCTTAGCTTCCCTGAACTAATTACAACTTCGAACATCTTTCATATAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGTAAACTTGCAAGACCTTGTTTTAATAAGTTTTTTTTTTATTATATATGTTCTTGGCCATCTTTTATCTTTGCTACTTGCGTAGATATGTAGCTTATTTGAACTCACTATTTACCGTTTAGCATATATTTTATAAGAAACAACACCATTGATGTATGAAATTACAAAAGAGGAGGGAGAAGGAAGTTATAAGAGACTTCTCTAATTGGACGGAAGAGACATTTAATAAGAGTGAAATAGAGCTAACAATTTACACACAAAAAAAAAAACTAAGTGAATAATGATATCCATTTGGAGAGGCATAGATGAAAGACCATCACCTTAAAAAAAAATTGTTCCAAATGCTCTCTTGTATTAGATGACAAGAGTGAGCTATTTATGTTTCTTAAGCAACATTATTATTTGAATTCTAATATTTGAACCTATCACGAGTAATATCAGGACGGGTGTGACCTTTAGAAAAGAAAGTGTTTGATATGTTGTTATCCAATCAAAACTAATAGCAACTGAGTCTATGTAAGGGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGGCCCACCCTTACTGGCACACCCCCTCATGTCCACCCCCCTTCGGGGCTCAGCCTCCTCGTTGACACATCGTCTGGTGTCTAGCTCTAATACCATTTGTAACGGTCCAAGCCCACCACTAGCAGATACTGTCCTCTTTAGGCTTTCCCTTTCAAGCTTCCCTTCAAGGTTTTTATAACACGTCTTCTAGGGAGAGGTTTTCACGCCTTTATAAAGAATGCTTCGTTCTCCTCCCCAATTGATGTAAGACCTCACAATCTACGTGTAAACTCAACCAATGCGGGCTAGTTCTCTCACCTTGCTAACTGTACTCTAGTGCTGTAGTGCATATTCTATTATGGAGTTTTACCAAGAACAGAGTGGAATTGAGCTGCAATTACACAAATAGGCAACAAACTAACATTGCTATTAGAAGTTCGAAACTCGCCTTAGTCAAGGTCTTTCTTCCAGACTGCGCATAAGATTTGTGGAAGAATCTTTTAAGTTTTCTGTATAAGGACAGCAGATTCATTAAACCCCTTCATGAGAGATAGCTTAGAAATAAAAAGAATTCTTGTCAATGTCAACGATTCACAACACCTTAGCAGATTCAATAAAGTAGCGCAACTCCCGTCTTGTTTGTTATCATTTTGTTCCCTCGTTTATTCGTTTAATGCGTGGAATCACGAACCTCGTACTTAAGTTATCAGCTCTGATTTCAGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGAACCATGGAAAGTGAGTGGAGTAAACTCCCTGTTCGCCAGTGTTTTATTTTATACCAGCCGTGATACTACTGTGAAGAACAAGAAGGGGCCGTCGGCCATTGTAACTCTGGTTTCCTCTTTTCATTTTTTCTTTGGCTTCCATTTTTTTCGCTGCTTGATGTGAAGGACCTAAAAAATGTTTAGCTATGGATAGAAATATGGGATTCAGTA

mRNA sequence

AATTCTAATGTTCTTTCTCTTTCTATTTCTGAAATTAAGAAAAGAGGTTAAAAGCTAAAAAGATTTTGGAGACGAATTGGACTGTAATTCATTGGAAGAGGACAAAAAGGTTTAGCTGCGAACGAAGGAAAATAAAAAAAGCCCCCAAATCTGGAGTTCCTTCTGTTCTTTCGATTTCTTCAGCCTTCAATTCATTCTTGAATTTTGTACGAGCACACCTGCCTCAGATTTTGCTCTCGAAACGGGATTTAGGGTTAGGGTTAGGGTTGAGTTTTTGCGTCTCTCGTTTAGTTCTAAAGATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGAACCATGGAAAGTGAGTGGAGTAAACTCCCTGTTCGCCAGTGTTTTATTTTATACCAGCCGTGATACTACTGTGAAGAACAAGAAGGGGCCGTCGGCCATTGTAACTCTGGTTTCCTCTTTTCATTTTTTCTTTGGCTTCCATTTTTTTCGCTGCTTGATGTGAAGGACCTAAAAAATGTTTAGCTATGGATAGAAATATGGGATTCAGTA

Coding sequence (CDS)

ATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGA

Protein sequence

MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKVGARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV

Homology

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BLAST of Carg05046 vs. NCBI nr
Match: XP_023513941.1 (ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.4 bits (973), Expect = 8.3e-102
Identity = 203/222 (91.44%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLD SKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDGSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVEARPSTTQKVVANPATRKKA+Q                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEARPSTTQKVVANPATRKKASQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046 vs. NCBI nr
Match: XP_022960459.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 196/222 (88.29%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSG+RDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGIRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVEARPSTTQK        KKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEARPSTTQKXXXXXXXXKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046 vs. NCBI nr
Match: XP_023004756.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 195/222 (87.84%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSGV       SGTMKPQAVNSDPPK KLDVSKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVXXXXXXXSGTMKPQAVNSDPPKLKLDVSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVE RPSTTQKVVANPATRKK AQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEVRPSTTQKVVANPATRKKDAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046 vs. NCBI nr
Match: XP_008458022.1 (PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 184/222 (82.88%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA  +DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA PSTTQK VA  ATRK AAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046 vs. NCBI nr
Match: XP_004139631.1 (PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] >KGN44601.1 hypothetical protein Csa_7G341210 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 7.8e-92
Identity = 183/222 (82.43%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA  S+TQK VA  ATRKKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046 vs. TAIR10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 124/224 (55.36%), Postives = 158/224 (70.54%), Query Frame = 0


Query: 1   MYADRLDAD--THRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR 60
           MYAD+L+A+  + + +KDR+NG S D+S R R +TGKRQRQDDKWEHDL+ +D+PQ SNR
Sbjct: 1   MYADKLEAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHDLFSSDKPQLSNR 60

Query: 61  KVGARDLRLKLQKRSQ-QQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
           +V  RDLRLKLQKR    QSG  + SGVRDLR++LSGTM  Q  NSDPPK K + ++P+ 
Sbjct: 61  RVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSM 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           K+ + E    T  +  ++ ATRKK+ Q                  +D+SVD FL+SLGLE
Sbjct: 121 KSVATE----TETRKTSSQATRKKSQQ------------------ADSSVDSFLESLGLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KYS  FQ EEVDM AL+HM D+DLKA+ +PMGPRKKILLAL S+
Sbjct: 181 KYSTAFQVEEVDMDALMHMTDDDLKAMLIPMGPRKKILLALGSK 202

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BLAST of Carg05046 vs. TAIR10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 114/226 (50.44%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1   MYADRLDADT--HRSIKDRLNGNSSDLSAR--RRPITGKRQRQ-DDKWEHDLYE-NDEPQ 60
           MY+D + A+T   ++ K+RLNG S D S+R  ++ +T KR RQ DDKWEHDL+E +DEP+
Sbjct: 1   MYSDLVVAETKISKTFKNRLNGGSGDFSSRGKQQQVTRKRGRQDDDKWEHDLFEDDDEPR 60

Query: 61  TSNRKVGARDLRLKLQ-KRSQQQSGNSSFS-GVRDLREKLSGTMKPQAVNSDPPKPKLDV 120
            S R+V  +DLRLKLQ KR   Q G   FS  V DLR+KLS T+ PQ  NS     K + 
Sbjct: 61  LSKRRVDPKDLRLKLQKKRHGSQIGGRVFSVSVADLRDKLSRTVNPQTKNS-----KREA 120

Query: 121 SKPTRKNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQ 180
            +P  K  SV  +P T  +   N AT+K   Q                  +D SVD FL+
Sbjct: 121 VRPAIKKVSVGTKPET--RAAPNRATKKDPQQ------------------NDASVDSFLE 180

Query: 181 SLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLAL 219
           SLGLEKYS  FQ EEVDM AL HM D+DLKAL +PMGPRKKILLAL
Sbjct: 181 SLGLEKYSTAFQVEEVDMDALRHMTDDDLKALLIPMGPRKKILLAL 201

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BLAST of Carg05046 vs. TAIR10
Match: AT1G70180.2 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 173 SLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALES 221
           S+GL KYS+ F+ EEVDMT +  M + DLK L +PMGPRKKIL A+ S
Sbjct: 409 SIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPMGPRKKILQAIAS 456

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BLAST of Carg05046 vs. Swiss-Prot
Match: sp|Q9Y6Y8|S23IP_HUMAN (SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 162 KSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 221
           K   ++ + L++L L +Y  TF+ E++DM +L+    +DLK +G+P+GPRKKI   +E +
Sbjct: 644 KEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHK 703

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BLAST of Carg05046 vs. Swiss-Prot
Match: sp|Q8K3X6|ANS4B_MOUSE (Ankyrin repeat and SAM domain-containing protein 4B OS=Mus musculus OX=10090 GN=Anks4b PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 165 TSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           T ++ FLQS  LE++   F  E++D+ AL+   DEDL+ + + +GPRKK+L A++ R
Sbjct: 352 TPLEVFLQSQHLEEFLPIFMREQIDLEALLLCSDEDLQNIHMQLGPRKKVLSAIDKR 408

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BLAST of Carg05046 vs. Swiss-Prot
Match: sp|Q495M9|USH1G_HUMAN (Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 167 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Carg05046 vs. Swiss-Prot
Match: sp|Q80T11|USH1G_MOUSE (Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.9e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 167 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFASLLRHEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Carg05046 vs. Swiss-Prot
Match: sp|Q8N8V4|ANS4B_HUMAN (Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ANKS4B PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 8.4e-05
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 165 TSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           T ++ FL S  LE++   F+ E++D+ AL+   DEDL+++ + +GPRKK+L A+  R
Sbjct: 346 TPLEVFLLSQHLEEFLPIFKREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRR 402

[Close]

BLAST of Carg05046 vs. TrEMBL
Match: tr|A0A1S3C7G6|A0A1S3C7G6_CUCME (ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103497565 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.8e-92
Identity = 184/222 (82.88%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA  +DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA PSTTQK VA  ATRK AAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Carg05046 vs. TrEMBL
Match: tr|A0A0A0K9W5|A0A0A0K9W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 5.2e-92
Identity = 183/222 (82.43%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA  S+TQK VA  ATRKKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Carg05046 vs. TrEMBL
Match: tr|M5VLG2|M5VLG2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.0e-68
Identity = 152/225 (67.56%), Postives = 171/225 (76.00%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR +ADT RSIKDRLNG+  D S RRR I GKRQRQDDKWEHDLYE+++PQ SNRKV
Sbjct: 1   MYADREEADTKRSIKDRLNGSFRDNSGRRRQIAGKRQRQDDKWEHDLYEDNDPQVSNRKV 60

Query: 61  GARDLRLKLQKRS---QQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            ARDLRLKLQ++S     QSG  S SGVRDLREKLSGTM PQ VN+DPPK KL+ +KP R
Sbjct: 61  DARDLRLKLQRKSFKQSSQSGTRSLSGVRDLREKLSGTMVPQPVNADPPKTKLEAAKPVR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           ++ +V A    T+K V NPA+RKK +QKA                   SVD+FL SL LE
Sbjct: 121 RSTAVGASAQETKK-VTNPASRKKTSQKA-----------------GASVDEFLTSLDLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           KYSITFQAEEVDMTALVHM DEDLKALG+PMGPRKKILLALE+RV
Sbjct: 181 KYSITFQAEEVDMTALVHMTDEDLKALGIPMGPRKKILLALETRV 207

[Close]

BLAST of Carg05046 vs. TrEMBL
Match: tr|A0A061DV46|A0A061DV46_THECC (Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002879 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.2e-65
Identity = 145/224 (64.73%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR++A   RS+K+RLNGNS+D S RR  ITGKR R+DDKWEHDLY++D PQ SNRKV
Sbjct: 1   MYADRVEAVGKRSVKERLNGNSADNSIRRHQITGKRLREDDKWEHDLYQDDLPQVSNRKV 60

Query: 61  GARDLRLKLQKRSQQ---QSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            ARDLRLKLQ++S Q   QSG  +FSGVRDLREKLSGTM  Q +N DPPKPK++ +KP R
Sbjct: 61  DARDLRLKLQRKSLQQVSQSGRGAFSGVRDLREKLSGTMNTQPLNVDPPKPKVETAKPAR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           K+ +VE       K  AN A RKK  QKA                 DTSV+ FLQSLG+E
Sbjct: 121 KSVAVET-SEPEPKRAANMAARKKVQQKA-----------------DTSVEGFLQSLGIE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KY+I FQAEEVDMTALVHM DEDLKALG+PMGPRKKILLALE R
Sbjct: 181 KYTILFQAEEVDMTALVHMTDEDLKALGIPMGPRKKILLALEPR 206

[Close]

BLAST of Carg05046 vs. TrEMBL
Match: tr|A0A067JR58|A0A067JR58_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17525 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.5e-64
Identity = 145/224 (64.73%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR++A   RS+K+RLNGNS D S RRR ITGKRQRQDDKWEHDLYE+DEP  S RKV
Sbjct: 1   MYADRVEAAAKRSVKERLNGNSIDDSTRRRQITGKRQRQDDKWEHDLYEDDEPHASYRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNS---SFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            A+DLRLKLQ++S  Q+  +   S SG RDLREKLSGTM  Q VN+DPPK KL+ +KP R
Sbjct: 61  SAQDLRLKLQRKSLPQASQTVKGSVSGTRDLREKLSGTMNSQPVNADPPKRKLETAKPAR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           ++ +VEA P    K VAN ATR+K+ Q                 K+D S++ FL+SLGLE
Sbjct: 121 RSVAVEA-PEPEIKKVANVATRQKSQQ-----------------KTDASMEGFLRSLGLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KY I+FQAEEVDMTALVHM DEDLKALGVPMGPRKKILLALESR
Sbjct: 181 KYIISFQAEEVDMTALVHMTDEDLKALGVPMGPRKKILLALESR 206

The following BLAST results are available for this feature:

BLAST of Carg05046 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513941.1	8.3e-102	91.44	ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022960459.1	2.1e-97	88.29	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata]	[more]
XP_023004756.1	6.8e-96	87.84	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima]	[more]
XP_008458022.1	2.7e-92	82.88	PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo]	[more]
XP_004139631.1	7.8e-92	82.43	PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] ...	[more]

BLAST of Carg05046 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07170.1	1.2e-57	55.36	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G48680.1	1.0e-40	50.44	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.2	1.6e-09	60.42	Sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of Carg05046 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9Y6Y8\|S23IP_HUMAN	1.0e-05	38.33	SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1	[more]
sp\|Q8K3X6\|ANS4B_MOUSE	1.3e-05	42.11	Ankyrin repeat and SAM domain-containing protein 4B OS=Mus musculus OX=10090 GN=...	[more]
sp\|Q495M9\|USH1G_HUMAN	2.9e-05	41.82	Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1	[more]
sp\|Q80T11\|USH1G_MOUSE	4.9e-05	41.82	Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV...	[more]
sp\|Q8N8V4\|ANS4B_HUMAN	8.4e-05	40.35	Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=A...	[more]

BLAST of Carg05046 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7G6\|A0A1S3C7G6_CUCME	1.8e-92	82.88	ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0K9W5\|A0A0A0K9W5_CUCSA	5.2e-92	82.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1	[more]
tr\|M5VLG2\|M5VLG2_PRUPE	1.0e-68	67.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1	[more]
tr\|A0A061DV46\|A0A061DV46_THECC	9.2e-65	64.73	Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=36...	[more]
tr\|A0A067JR58\|A0A067JR58_JATCU	3.5e-64	64.73	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17525 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013761	SAM/pointed_sf
IPR001660	SAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05046-RA	Carg05046-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 159..222 e-value: 3.0E-8 score: 43.4
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 163..219 e-value: 2.6E-15 score: 56.5
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 162..222 score: 10.584
None	No IPR available	GENE3D	G3DSA:1.10.150.50		coord: 164..222 e-value: 1.1E-20 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..139
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 1..130
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 148..221
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 148..221
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 1..130
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 166..219 e-value: 1.97017E-16 score: 69.5757
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	SSF47769	SAM/Pointed domain	coord: 164..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05046	Cla014941	Watermelon (97103) v1	carwmB0079
Carg05046	MELO3C021054	Melon (DHL92) v3.5.1	carmeB0083
Carg05046	ClCG09G008850	Watermelon (Charleston Gray)	carwcgB0080
Carg05046	CmaCh17G012700	Cucurbita maxima (Rimu)	carcmaB0104
Carg05046	CmaCh08G002230	Cucurbita maxima (Rimu)	carcmaB0112
Carg05046	CmoCh08G002220	Cucurbita moschata (Rifu)	carcmoB0119
Carg05046	Lsi02G020980	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05046	Cp4.1LG12g11120	Cucurbita pepo (Zucchini)	carcpeB0116
Carg05046	Cp4.1LG17g11160	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05046	MELO3C021054.2	Melon (DHL92) v3.6.1	carmedB0084
Carg05046	Cla97C09G171640	Watermelon (97103) v2	carwmbB0085
Carg05046	Bhi09G001115	Wax gourd	carwgoB0098

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05046	Cucumber (Gy14) v2	carcgybB0095
Carg05046	Cucumber (Gy14) v1	carcgyB0093
Carg05046	Cucurbita moschata (Rifu)	carcmoB0112
Carg05046	Wild cucumber (PI 183967)	carcpiB0099
Carg05046	Cucumber (Chinese Long) v2	carcuB0095
Carg05046	Cucumber (Chinese Long) v3	carcucB0102