Carg05046-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05046-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	SAM domain protein
Location	Cucurbita_argyrosperma_scaffold_060 : 1032877 .. 1037435 (+)
Sequence length	1178

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCTAATGTTCTTTCTCTTTCTATTTCTGAAATTAAGAAAAGAGGTTAAAAGCTAAAAAGATTTTGGAGACGAATTGGACTGTAATTCATTGGAAGAGGACAAAAAGGTTTAGCTGCGAACGAAGGAAAATAAAAAAAGCCCCCAAATCTGGAGTTCCTTCTGTTCTTTCGATTTCTTCAGCCTTCAATTCATTCTTGAATTTTGTACGAGCACACCTGCCTCAGATTTTGCTCTCGAAACGGGATTTAGGGTTAGGGTTAGGGTTGAGTTTTTGCGTCTCTCGTTTAGTTCTAAAGATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGTTCGTTGTCTTTTTTTTTTTTTCCTATCTGTTTGGATTTTTGGGCAATTTTTGAGATGTAGGTAGTAATTGTTTTTGGAATTTTTACTGTTGTTTGTGTTACTCTTAAATTTTTGTACTATGGTGGAGTCGCGAGCTAAGACATTTTGGTTGTGGAGTTTATCATTGGTTGAACTTACTGGTTTTTGCGATTTTACTTAAGACTGAAGGTGTTGCCTATTTTGGGTGTAACTTTGCTGTTCTTCTTGTTCGAGTTGTTTTTGGAATCTTGTAGATTGTATGTATTTAGAGCACCTTCAGCTATTACAACTTAGATGGAATGCAGTGAGGACTGTTTGGTTACATTAAGCCATCAATCTTCTTTGGTGTATTTGTTCTGTTTCTGTGCTTGTTGGTTTGGCTTCATGACTTTATGTAGTTTCCTAGCTTAAGTCTTGTTTTCTATCCAAGTAGGAGTTCCAAGATTATATGCTACGGCTTTGTTACAAATTTGTTATATAGGTTTAATGTGCAATTGGATTTTGGCAATGCCGAGAACTAACTTGGTGGATCTAGCATATATTATTTGTCAAAGATCTTGAATGGTTAGGCTTTTATGCTTATTTGGTGCTTCTTTAGGGTGTAAGTGGTTCGGGTAGCTCGGTTTTTTTGGCTAAAAACAATACTGATTCAGGTGGGGAAAAAACTGAATGAAAATGGGCTTTCCTTGAAAGTTGAACTGACTGCTCAAACAAAAAGAAACTTGGGTGCAGTGTGCAACCAAATAAAAAACCAATTAAGACAAGAAAATCTAACACAACAAAGATATTCACAGTTTTAACTTATGTATAGTAGAATCGACCAACACTTATTAACCATACCAATAAAACCGGTTCCCGGTTTATTAAATTTTCTTTTCAGTTTTAAATTTGCTCCTCTAGTTCTCTAGGAACGGTCATTCTCTTATAGTATTCTAGCTTCTCAATGAAAGCCTCATTTTCCATCCAAGAAAAAGCGACCTTCAAGATCATGCTTGAGCATCGGTACTCATTCTTTACATATGATGATAGTGGACTTACCATGCTGGAAACTAATTTGATTGATACTAGCATAGGTTATTTTATACAGCGTTTGAAGATTGTTGAAGCTTTTCTTGTATTTGGTGCTTACGAGTGTGCTTTCTTTCATTGATTTTTAGACGCATGTTGTCTTGTTGCTTTCATTTTTTAATTGAGATAGGAATTTGTGATTTTTTTTTTTATAAGTTTAGGCATTTGGTTTTCTGAAGTTGCCTTAATGATGTGGATGGCCGTCAATATTCATTTACCTTTTTGTGAGAATATTTGATTATCTTGTTAGCTGGACAGTTAATGGTCTACATGTTATTATTTGTTGAGTGCTCTGTATTCATTATATCATGCCGATACCATGTACATTCCAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAGTACGAATTGGGTGTAATTGTATCACACGTCTAAAACCCTTTTGTTAGATGGGTCTAATCCACTTTATAAGCTCTTGATTATGTTCTATTGGCTTTAAAGATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAGTTTTTATTAGAAAATATTCTTTCTGTCAAACGCACGATAGAGGTTGGTCATTTTAGCATTCAATTTTTGTACCTGGAAAACTTTCTTATCTGTGAAAATAATTTCTTTGAACGTTCATAGTCATTGAGAAGACTTCAGGAAGTTATTTGTTTAAGTACACCATTTTCTTATATTTACTTTTTTGCTTCATTGGCTTTTATTCTGTTGGAGCCCCTCCATCAGCCCTTCATGATATTCAGATTAGTGCATCTGGTACAGTCTACATATCTCTTAATCCCTTTTGCTGCTTTGCTAATGAGTTGCAGAGACGTTCAGCCAAATGCATGTTATGTCTCGACATCTTTAGTTGAATTAAAATTTAATCGAGTTGTAGTAACCGGACTTGGAATTACCGACCTTATGTTATAGTTGATGGGCTGAGTTACCATGCGAACAATTGAAAGTCTGACGTTTTGTTTTCTACAATTTGTCTTTCCTTGATTAACATGACTTTTGATGCAGAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTATGAAAATCTTATGTTTTCAAGGATTGTAAGCTCCTTGCTTTCAAGCTTTCGGCTTAGCTTCCCTGAACTAATTACAACTTCGAACATCTTTCATATAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGTAAACTTGCAAGACCTTGTTTTAATAAGTTTTTTTTTTATTATATATGTTCTTGGCCATCTTTTATCTTTGCTACTTGCGTAGATATGTAGCTTATTTGAACTCACTATTTACCGTTTAGCATATATTTTATAAGAAACAACACCATTGATGTATGAAATTACAAAAGAGGAGGGAGAAGGAAGTTATAAGAGACTTCTCTAATTGGACGGAAGAGACATTTAATAAGAGTGAAATAGAGCTAACAATTTACACACAAAAAAAAAAACTAAGTGAATAATGATATCCATTTGGAGAGGCATAGATGAAAGACCATCACCTTAAAAAAAAATTGTTCCAAATGCTCTCTTGTATTAGATGACAAGAGTGAGCTATTTATGTTTCTTAAGCAACATTATTATTTGAATTCTAATATTTGAACCTATCACGAGTAATATCAGGACGGGTGTGACCTTTAGAAAAGAAAGTGTTTGATATGTTGTTATCCAATCAAAACTAATAGCAACTGAGTCTATGTAAGGGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGGCCCACCCTTACTGGCACACCCCCTCATGTCCACCCCCCTTCGGGGCTCAGCCTCCTCGTTGACACATCGTCTGGTGTCTAGCTCTAATACCATTTGTAACGGTCCAAGCCCACCACTAGCAGATACTGTCCTCTTTAGGCTTTCCCTTTCAAGCTTCCCTTCAAGGTTTTTATAACACGTCTTCTAGGGAGAGGTTTTCACGCCTTTATAAAGAATGCTTCGTTCTCCTCCCCAATTGATGTAAGACCTCACAATCTACGTGTAAACTCAACCAATGCGGGCTAGTTCTCTCACCTTGCTAACTGTACTCTAGTGCTGTAGTGCATATTCTATTATGGAGTTTTACCAAGAACAGAGTGGAATTGAGCTGCAATTACACAAATAGGCAACAAACTAACATTGCTATTAGAAGTTCGAAACTCGCCTTAGTCAAGGTCTTTCTTCCAGACTGCGCATAAGATTTGTGGAAGAATCTTTTAAGTTTTCTGTATAAGGACAGCAGATTCATTAAACCCCTTCATGAGAGATAGCTTAGAAATAAAAAGAATTCTTGTCAATGTCAACGATTCACAACACCTTAGCAGATTCAATAAAGTAGCGCAACTCCCGTCTTGTTTGTTATCATTTTGTTCCCTCGTTTATTCGTTTAATGCGTGGAATCACGAACCTCGTACTTAAGTTATCAGCTCTGATTTCAGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGAACCATGGAAAGTGAGTGGAGTAAACTCCCTGTTCGCCAGTGTTTTATTTTATACCAGCCGTGATACTACTGTGAAGAACAAGAAGGGGCCGTCGGCCATTGTAACTCTGGTTTCCTCTTTTCATTTTTTCTTTGGCTTCCATTTTTTTCGCTGCTTGATGTGAAGGACCTAAAAAATGTTTAGCTATGGATAGAAATATGGGATTCAGTA

mRNA sequence

AATTCTAATGTTCTTTCTCTTTCTATTTCTGAAATTAAGAAAAGAGGTTAAAAGCTAAAAAGATTTTGGAGACGAATTGGACTGTAATTCATTGGAAGAGGACAAAAAGGTTTAGCTGCGAACGAAGGAAAATAAAAAAAGCCCCCAAATCTGGAGTTCCTTCTGTTCTTTCGATTTCTTCAGCCTTCAATTCATTCTTGAATTTTGTACGAGCACACCTGCCTCAGATTTTGCTCTCGAAACGGGATTTAGGGTTAGGGTTAGGGTTGAGTTTTTGCGTCTCTCGTTTAGTTCTAAAGATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGAACCATGGAAAGTGAGTGGAGTAAACTCCCTGTTCGCCAGTGTTTTATTTTATACCAGCCGTGATACTACTGTGAAGAACAAGAAGGGGCCGTCGGCCATTGTAACTCTGGTTTCCTCTTTTCATTTTTTCTTTGGCTTCCATTTTTTTCGCTGCTTGATGTGAAGGACCTAAAAAATGTTTAGCTATGGATAGAAATATGGGATTCAGTA

Coding sequence (CDS)

ATGTATGCTGATCGATTGGATGCCGACACTCATAGGTCTATAAAGGACCGCCTCAATGGAAATTCGTCTGACCTTTCTGCCCGCCGGCGGCCGATTACTGGGAAGAGGCAAAGACAAGATGACAAGTGGGAGCATGATCTCTACGAGAATGATGAACCACAAACTTCAAATCGCAAAGTTGGTGCTCGAGATCTTCGCTTGAAGCTCCAAAAGAGAAGTCAACAGCAAAGTGGAAATTCATCCTTTTCAGGAGTCCGTGACCTACGTGAAAAGTTGTCTGGCACAATGAAGCCTCAAGCTGTGAATAGTGATCCACCAAAACCAAAATTGGATGTTTCAAAGCCGACCAGAAAAAATGATTCGGTTGAAGCTCGCCCTTCAACCACTCAAAAAGTTGTAGCCAACCCTGCTACTAGGAAAAAGGCTGCACAGAAGGCAAGAAACTTCCATTTCTTTTATTTATTTTTTATTTGTTATCTTTTTAAAAGTGATACGTCAGTGGATGACTTCCTGCAGTCCTTGGGCCTTGAAAAATATTCCATCACATTTCAAGCTGAGGAGGTTGATATGACAGCGCTTGTACACATGGGTGACGAAGATCTCAAGGCTTTAGGAGTACCAATGGGACCAAGAAAGAAGATCCTATTGGCATTGGAATCAAGAGTCTGA

Protein sequence

MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKVGARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV

Homology

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BLAST of Carg05046-RA vs. NCBI nr
Match: XP_023513941.1 (ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.4 bits (973), Expect = 8.3e-102
Identity = 203/222 (91.44%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLD SKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDGSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVEARPSTTQKVVANPATRKKA+Q                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEARPSTTQKVVANPATRKKASQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046-RA vs. NCBI nr
Match: XP_022960459.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 196/222 (88.29%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSG+RDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGIRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVEARPSTTQK        KKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEARPSTTQKXXXXXXXXKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046-RA vs. NCBI nr
Match: XP_023004756.1 (ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima])

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 195/222 (87.84%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV
Sbjct: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQKRSQQQSGNSSFSGV       SGTMKPQAVNSDPPK KLDVSKPTRKND
Sbjct: 61  GARDLRLKLQKRSQQQSGNSSFSGVXXXXXXXSGTMKPQAVNSDPPKLKLDVSKPTRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           SVE RPSTTQKVVANPATRKK AQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 SVEVRPSTTQKVVANPATRKKDAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046-RA vs. NCBI nr
Match: XP_008458022.1 (PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo])

HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 184/222 (82.88%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA  +DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA PSTTQK VA  ATRK AAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046-RA vs. NCBI nr
Match: XP_004139631.1 (PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] >KGN44601.1 hypothetical protein Csa_7G341210 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 7.8e-92
Identity = 183/222 (82.43%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA  S+TQK VA  ATRKKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

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BLAST of Carg05046-RA vs. TAIR10
Match: AT3G07170.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-57
Identity = 124/224 (55.36%), Postives = 158/224 (70.54%), Query Frame = 0


Query: 1   MYADRLDAD--THRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR 60
           MYAD+L+A+  + + +KDR+NG S D+S R R +TGKRQRQDDKWEHDL+ +D+PQ SNR
Sbjct: 1   MYADKLEAESGSRKVVKDRINGGSGDISTRVRQVTGKRQRQDDKWEHDLFSSDKPQLSNR 60

Query: 61  KVGARDLRLKLQKRSQ-QQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
           +V  RDLRLKLQKR    QSG  + SGVRDLR++LSGTM  Q  NSDPPK K + ++P+ 
Sbjct: 61  RVDPRDLRLKLQKRHHGSQSGREAGSGVRDLRDQLSGTMNQQPKNSDPPKSKAEAARPSM 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           K+ + E    T  +  ++ ATRKK+ Q                  +D+SVD FL+SLGLE
Sbjct: 121 KSVATE----TETRKTSSQATRKKSQQ------------------ADSSVDSFLESLGLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KYS  FQ EEVDM AL+HM D+DLKA+ +PMGPRKKILLAL S+
Sbjct: 181 KYSTAFQVEEVDMDALMHMTDDDLKAMLIPMGPRKKILLALGSK 202

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BLAST of Carg05046-RA vs. TAIR10
Match: AT5G48680.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 114/226 (50.44%), Postives = 140/226 (61.95%), Query Frame = 0


Query: 1   MYADRLDADT--HRSIKDRLNGNSSDLSAR--RRPITGKRQRQ-DDKWEHDLYE-NDEPQ 60
           MY+D + A+T   ++ K+RLNG S D S+R  ++ +T KR RQ DDKWEHDL+E +DEP+
Sbjct: 1   MYSDLVVAETKISKTFKNRLNGGSGDFSSRGKQQQVTRKRGRQDDDKWEHDLFEDDDEPR 60

Query: 61  TSNRKVGARDLRLKLQ-KRSQQQSGNSSFS-GVRDLREKLSGTMKPQAVNSDPPKPKLDV 120
            S R+V  +DLRLKLQ KR   Q G   FS  V DLR+KLS T+ PQ  NS     K + 
Sbjct: 61  LSKRRVDPKDLRLKLQKKRHGSQIGGRVFSVSVADLRDKLSRTVNPQTKNS-----KREA 120

Query: 121 SKPTRKNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQ 180
            +P  K  SV  +P T  +   N AT+K   Q                  +D SVD FL+
Sbjct: 121 VRPAIKKVSVGTKPET--RAAPNRATKKDPQQ------------------NDASVDSFLE 180

Query: 181 SLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLAL 219
           SLGLEKYS  FQ EEVDM AL HM D+DLKAL +PMGPRKKILLAL
Sbjct: 181 SLGLEKYSTAFQVEEVDMDALRHMTDDDLKALLIPMGPRKKILLAL 201

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BLAST of Carg05046-RA vs. TAIR10
Match: AT1G70180.2 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 173 SLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALES 221
           S+GL KYS+ F+ EEVDMT +  M + DLK L +PMGPRKKIL A+ S
Sbjct: 409 SIGLGKYSLAFKREEVDMTTIKQMKESDLKDLIIPMGPRKKILQAIAS 456

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BLAST of Carg05046-RA vs. Swiss-Prot
Match: sp|Q9Y6Y8|S23IP_HUMAN (SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-05
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 162 KSDTSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 221
           K   ++ + L++L L +Y  TF+ E++DM +L+    +DLK +G+P+GPRKKI   +E +
Sbjct: 644 KEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHK 703

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BLAST of Carg05046-RA vs. Swiss-Prot
Match: sp|Q8K3X6|ANS4B_MOUSE (Ankyrin repeat and SAM domain-containing protein 4B OS=Mus musculus OX=10090 GN=Anks4b PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-05
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 165 TSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           T ++ FLQS  LE++   F  E++D+ AL+   DEDL+ + + +GPRKK+L A++ R
Sbjct: 352 TPLEVFLQSQHLEEFLPIFMREQIDLEALLLCSDEDLQNIHMQLGPRKKVLSAIDKR 408

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BLAST of Carg05046-RA vs. Swiss-Prot
Match: sp|Q495M9|USH1G_HUMAN (Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 167 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFAALLRQEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Carg05046-RA vs. Swiss-Prot
Match: sp|Q80T11|USH1G_MOUSE (Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.9e-05
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 167 VDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           ++ FL SL +E ++   + E++D+ AL+   D DL+++ VP+GPRKKIL A+  R
Sbjct: 392 LETFLASLHMEDFASLLRHEKIDLEALMLCSDLDLRSISVPLGPRKKILGAVRRR 446

[Close]

BLAST of Carg05046-RA vs. Swiss-Prot
Match: sp|Q8N8V4|ANS4B_HUMAN (Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=ANKS4B PE=1 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 8.4e-05
Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 165 TSVDDFLQSLGLEKYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           T ++ FL S  LE++   F+ E++D+ AL+   DEDL+++ + +GPRKK+L A+  R
Sbjct: 346 TPLEVFLLSQHLEEFLPIFKREQIDLEALLLCSDEDLQSIQMQLGPRKKVLNAINRR 402

[Close]

BLAST of Carg05046-RA vs. TrEMBL
Match: tr|A0A1S3C7G6|A0A1S3C7G6_CUCME (ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103497565 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.8e-92
Identity = 184/222 (82.88%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA  +DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAAKNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA PSTTQK VA  ATRK AAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHPSTTQKAVAKSATRKNAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Carg05046-RA vs. TrEMBL
Match: tr|A0A0A0K9W5|A0A0A0K9W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 5.2e-92
Identity = 183/222 (82.43%), Postives = 195/222 (87.84%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADRL+AD HRSIKDRLNGNSSDLSARRRPITGKRQR+DDKWEHDLYENDEPQTSNR+V
Sbjct: 1   MYADRLEADNHRSIKDRLNGNSSDLSARRRPITGKRQREDDKWEHDLYENDEPQTSNRRV 60

Query: 61  GARDLRLKLQKRSQQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTRKND 120
           GARDLRLKLQK+SQQQSGN+ FSGVRDLREKLSGTMKPQA N+DPPKPKL+V+K  RKND
Sbjct: 61  GARDLRLKLQKKSQQQSGNAPFSGVRDLREKLSGTMKPQAANNDPPKPKLEVTKAPRKND 120

Query: 121 SVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLEKYS 180
           ++EA  S+TQK VA  ATRKKAAQ                 KSDTSVDDFLQSLGLEKYS
Sbjct: 121 AIEAHTSSTQKAVAKSATRKKAAQ-----------------KSDTSVDDFLQSLGLEKYS 180

Query: 181 ITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           ITFQAEEVDMTALVHMGD+DLKALGVPMGPRKKILLALESRV
Sbjct: 181 ITFQAEEVDMTALVHMGDDDLKALGVPMGPRKKILLALESRV 205

[Close]

BLAST of Carg05046-RA vs. TrEMBL
Match: tr|M5VLG2|M5VLG2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.0e-68
Identity = 152/225 (67.56%), Postives = 171/225 (76.00%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR +ADT RSIKDRLNG+  D S RRR I GKRQRQDDKWEHDLYE+++PQ SNRKV
Sbjct: 1   MYADREEADTKRSIKDRLNGSFRDNSGRRRQIAGKRQRQDDKWEHDLYEDNDPQVSNRKV 60

Query: 61  GARDLRLKLQKRS---QQQSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            ARDLRLKLQ++S     QSG  S SGVRDLREKLSGTM PQ VN+DPPK KL+ +KP R
Sbjct: 61  DARDLRLKLQRKSFKQSSQSGTRSLSGVRDLREKLSGTMVPQPVNADPPKTKLEAAKPVR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           ++ +V A    T+K V NPA+RKK +QKA                   SVD+FL SL LE
Sbjct: 121 RSTAVGASAQETKK-VTNPASRKKTSQKA-----------------GASVDEFLTSLDLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESRV 223
           KYSITFQAEEVDMTALVHM DEDLKALG+PMGPRKKILLALE+RV
Sbjct: 181 KYSITFQAEEVDMTALVHMTDEDLKALGIPMGPRKKILLALETRV 207

[Close]

BLAST of Carg05046-RA vs. TrEMBL
Match: tr|A0A061DV46|A0A061DV46_THECC (Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_002879 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.2e-65
Identity = 145/224 (64.73%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR++A   RS+K+RLNGNS+D S RR  ITGKR R+DDKWEHDLY++D PQ SNRKV
Sbjct: 1   MYADRVEAVGKRSVKERLNGNSADNSIRRHQITGKRLREDDKWEHDLYQDDLPQVSNRKV 60

Query: 61  GARDLRLKLQKRSQQ---QSGNSSFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            ARDLRLKLQ++S Q   QSG  +FSGVRDLREKLSGTM  Q +N DPPKPK++ +KP R
Sbjct: 61  DARDLRLKLQRKSLQQVSQSGRGAFSGVRDLREKLSGTMNTQPLNVDPPKPKVETAKPAR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           K+ +VE       K  AN A RKK  QKA                 DTSV+ FLQSLG+E
Sbjct: 121 KSVAVET-SEPEPKRAANMAARKKVQQKA-----------------DTSVEGFLQSLGIE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KY+I FQAEEVDMTALVHM DEDLKALG+PMGPRKKILLALE R
Sbjct: 181 KYTILFQAEEVDMTALVHMTDEDLKALGIPMGPRKKILLALEPR 206

[Close]

BLAST of Carg05046-RA vs. TrEMBL
Match: tr|A0A067JR58|A0A067JR58_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17525 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.5e-64
Identity = 145/224 (64.73%), Postives = 168/224 (75.00%), Query Frame = 0


Query: 1   MYADRLDADTHRSIKDRLNGNSSDLSARRRPITGKRQRQDDKWEHDLYENDEPQTSNRKV 60
           MYADR++A   RS+K+RLNGNS D S RRR ITGKRQRQDDKWEHDLYE+DEP  S RKV
Sbjct: 1   MYADRVEAAAKRSVKERLNGNSIDDSTRRRQITGKRQRQDDKWEHDLYEDDEPHASYRKV 60

Query: 61  GARDLRLKLQKRSQQQSGNS---SFSGVRDLREKLSGTMKPQAVNSDPPKPKLDVSKPTR 120
            A+DLRLKLQ++S  Q+  +   S SG RDLREKLSGTM  Q VN+DPPK KL+ +KP R
Sbjct: 61  SAQDLRLKLQRKSLPQASQTVKGSVSGTRDLREKLSGTMNSQPVNADPPKRKLETAKPAR 120

Query: 121 KNDSVEARPSTTQKVVANPATRKKAAQKARNFHFFYLFFICYLFKSDTSVDDFLQSLGLE 180
           ++ +VEA P    K VAN ATR+K+ Q                 K+D S++ FL+SLGLE
Sbjct: 121 RSVAVEA-PEPEIKKVANVATRQKSQQ-----------------KTDASMEGFLRSLGLE 180

Query: 181 KYSITFQAEEVDMTALVHMGDEDLKALGVPMGPRKKILLALESR 222
           KY I+FQAEEVDMTALVHM DEDLKALGVPMGPRKKILLALESR
Sbjct: 181 KYIISFQAEEVDMTALVHMTDEDLKALGVPMGPRKKILLALESR 206

The following BLAST results are available for this feature:

BLAST of Carg05046-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513941.1	8.3e-102	91.44	ankyrin repeat and SAM domain-containing protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022960459.1	2.1e-97	88.29	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita moschata]	[more]
XP_023004756.1	6.8e-96	87.84	ankyrin repeat and SAM domain-containing protein 6-like [Cucurbita maxima]	[more]
XP_008458022.1	2.7e-92	82.88	PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis melo]	[more]
XP_004139631.1	7.8e-92	82.43	PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Cucumis sativus] ...	[more]

BLAST of Carg05046-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07170.1	1.2e-57	55.36	Sterile alpha motif (SAM) domain-containing protein	[more]
AT5G48680.1	1.0e-40	50.44	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G70180.2	1.6e-09	60.42	Sterile alpha motif (SAM) domain-containing protein	[more]

BLAST of Carg05046-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9Y6Y8\|S23IP_HUMAN	1.0e-05	38.33	SEC23-interacting protein OS=Homo sapiens OX=9606 GN=SEC23IP PE=1 SV=1	[more]
sp\|Q8K3X6\|ANS4B_MOUSE	1.3e-05	42.11	Ankyrin repeat and SAM domain-containing protein 4B OS=Mus musculus OX=10090 GN=...	[more]
sp\|Q495M9\|USH1G_HUMAN	2.9e-05	41.82	Usher syndrome type-1G protein OS=Homo sapiens OX=9606 GN=USH1G PE=1 SV=1	[more]
sp\|Q80T11\|USH1G_MOUSE	4.9e-05	41.82	Usher syndrome type-1G protein homolog OS=Mus musculus OX=10090 GN=Ush1g PE=1 SV...	[more]
sp\|Q8N8V4\|ANS4B_HUMAN	8.4e-05	40.35	Ankyrin repeat and SAM domain-containing protein 4B OS=Homo sapiens OX=9606 GN=A...	[more]

BLAST of Carg05046-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C7G6\|A0A1S3C7G6_CUCME	1.8e-92	82.88	ankyrin repeat and SAM domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A0A0K9W5\|A0A0A0K9W5_CUCSA	5.2e-92	82.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G341210 PE=4 SV=1	[more]
tr\|M5VLG2\|M5VLG2_PRUPE	1.0e-68	67.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G200300 PE=4 SV=1	[more]
tr\|A0A061DV46\|A0A061DV46_THECC	9.2e-65	64.73	Sterile alpha motif domain-containing protein isoform 1 OS=Theobroma cacao OX=36...	[more]
tr\|A0A067JR58\|A0A067JR58_JATCU	3.5e-64	64.73	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17525 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013761	SAM/pointed_sf
IPR001660	SAM

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg05046	Carg05046	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05046-RA.exon.1	Carg05046-RA.exon.1	exon
Carg05046-RA.exon.2	Carg05046-RA.exon.2	exon
Carg05046-RA.exon.3	Carg05046-RA.exon.3	exon
Carg05046-RA.exon.4	Carg05046-RA.exon.4	exon
Carg05046-RA.exon.5	Carg05046-RA.exon.5	exon
Carg05046-RA.exon.6	Carg05046-RA.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05046-RA.five_prime_UTR.1	Carg05046-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05046-RA.CDS.1	Carg05046-RA.CDS.1	CDS
Carg05046-RA.CDS.2	Carg05046-RA.CDS.2	CDS
Carg05046-RA.CDS.3	Carg05046-RA.CDS.3	CDS
Carg05046-RA.CDS.4	Carg05046-RA.CDS.4	CDS
Carg05046-RA.CDS.5	Carg05046-RA.CDS.5	CDS
Carg05046-RA.CDS.6	Carg05046-RA.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg05046-RA.three_prime_UTR.1	Carg05046-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg05046-RA	Carg05046-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	SMART	SM00454	SAM_4	coord: 159..222 e-value: 3.0E-8 score: 43.4
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 163..219 e-value: 2.6E-15 score: 56.5
IPR001660	Sterile alpha motif domain	PROSITE	PS50105	SAM_DOMAIN	coord: 162..222 score: 10.584
None	No IPR available	GENE3D	G3DSA:1.10.150.50		coord: 164..222 e-value: 1.1E-20 score: 75.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..139
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 1..130
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 148..221
None	No IPR available	PANTHER	PTHR23509:SF3	SUBFAMILY NOT NAMED	coord: 148..221
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 1..130
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 166..219 e-value: 1.97017E-16 score: 69.5757
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	SSF47769	SAM/Pointed domain	coord: 164..220