Carg04963 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCTGTGGTGACTGCATCGTGTATCATCGGTGGAATTGGTACTCTTTCCTGTTTAAAAGCCCTAAGTTTTGTTCAATTTTTTCTATTTTCTTTTGATCGATGGGATTAAATGGTATACTTGTTTTATTTTTCGCTCAGATCTATCTATGGGGAACAGCATATATTTAAATGTTTTTTTTTTTTTTGGGAATTCTGTATAATCTAGGATCCGAAGAAACAATCACGATTGCAAACTCCTTATTTGACTAAATAGATTTTCGTATTTGAATCCTTTTGGTCGGATGCAGTTTTGCCAGTAAATAATTTGATTCTATGTTGGTATTTATTGGTTTAAACACATATAAGTGTTCGAGATTGGAGTTTTAAACTTCCATTCAAGCTGTGGCAATGAACTTCTGCAATGTGTTTCAATTCCTGGTTTTTGAGGCGTCTCTATTTTCATCCAAGCATGCTAACTAAGCGAGGTTGGAACTTGATCAAGATTCCTAGTAGTTTAGTTATTAAAGTTCTAAGAGGGAAGCATTGTAAGAATGGAAAACTTATCCTCGAGTAATGGTGGTTGTAGGTTAACCATTCCCACATCTGCAAAGTGTATTTTGGGGGAGAACTTTTAAAGAAGAGGATTATATTGAAATTGGGAATTAAATGTTAGTTGACATGGCCTCTAACCATTGGCTTTCTAGTGCTGTTAATGCAATTTTTTCCTTTGCCCCTCCTGGCTAGTGTTTTGGAGGGCATGAAGTTAGGACTTAAGCTAGAGGCACAAAAAAGGTGAGAGCTTTTGCGAGGTGAAACCACAATTTGTGTATAAGATCCCTCAAGTATGAGATAGGGAAAATTAAGGATTAACTATTAAAGAAAAACAACAGTTCACGTACAAAGATTACACAAAATCTTACAAATAATAAAGTTCAAAATTATGTTGCAGATACCCTAAAATGACAACCGGTCATCACTAAATAGGTCCGTATCTTCATTTTTCCCAATAACTAGTCCTATGTGCTTCCTCACCTTTTGACAAGACTCATCAAATGTTGGAAAAGGGTGGAAAAGTACAAGTCCTTGGAAAGTAAAAAAAACAAGAGGGAGAAGAGGAGATATGAGTAAGAAATAGAGTAAAATAGATGCAATGTTTACATTTACAATACTTCGAAGCAAATCTGGAAGAGGGATGTTAAGATTACTAAAGCTGAAATGTAAAATGTGTTTAAGAAAAGGTTAAATTCAACAACCATGATGAAAAAGAAAGTAGAGAGGAGGAGATGTAAGATAGAAATAGAGCAAAATGGATGCAATTTTTACATTTAAAATAATTTGGTTTAGTTTTACCATTTTGAAGTTCAGGGGTTCGTTTTTTTTGTTCATTTCTTTAGAGTTTGAGGGTAACTTTTACACTTGAAAGTTTAGAGGTGCAATTGTTACAACCACCATACTTTGGAGGTGGTTTCTTCCACTTGCCCTTAAGTTTACTATTCTCTTATCCTTATTTGTTAAGGAATTGCCCTGTACTTTCTTCAGACTTCTCAAACTACCCTCTAGAATGGCTGGTGGAACACATCATGTCACTACATCAGAAACTACACATTCCACAGTTTTTGCAATGTCTGTCTCGCTTTAAGCACATTAGAAACAACCATTTATCTTTTCCTCGAAAATAATCTGTTGGCTAATATTCGACTTTTCGCCTCCCCCTCCCCCCCCACACACACACCGTCTCCTCATCTTCCATTTCGGCTCTCAAATCTTCACTCTTGTACCCGACTCATCTATCAGACTAACACAAGAACTCCCCCTCATTAACTTCCTGTAACTACTCCTTTCCTCCTAATACACACACACACATTGGTAAGTGTTTAGGCCTGCCTACTGCATATGGTTGTTAAGGAAATTTATAGGATATGAAGTCCTAGGTAGGTAACTACTGTAGCATGCACTCATTCCTTCTTACCACTTTTCTATTTACATTGGTCCTTATTTGACCTCTAGGTCAACCCGTAGTAATTCCTTATCGACTCTTTTTAACTCCTCCTTGACTCTCTCTATACGAGCTTCCAAACAATTCTCTCTCCGCATCCTCCAAATTAGTCTTCTTGGTCTGATCGTCAATCTTCAATGCTGCCTCCTTGGAAAGTGAACTGTGCTCCTCTAACACTTCTGTGACTAACAACCTATCAGAGTTTGGAGCCACTACCTGCACAAAGTACACCATCGCCGCTAGTGACCAGTGGTGAAATGAAATACGATAACAAATTTGCAACCCCAATGACAAGAAATAACACTAAAAGATAATGCTGCAGAATCAAAGAAAACTTACGAAGGTCCTTTCGAGATTACTCTCTCTTCCCCATTACCATCAACCCTGACAACTTCTTAAGTAATTACAAATATGCCACTGTTAAGTGTCAATATCCCTGATTTTATTTCCACTATTTCCCTACAGGTATTCTAACATATGGAGGGAGAAACCACCATCCCTGTCATTTAAAATTATCTCTGGAAACTTCACTATTTACATTGATATCATTTAATTCACCACCAGCTTCCTCTCCTAATCCGTTCTTCCACTCCAAGATCTCTTCTGACTTTTCACCTTCCTGGATCCCATTCTATTTATTTTCAAAGATATTACTGATTCATCTAGCATTTTCACTCCCAAAGCGCTAAACATCATTAAATTTTTATACTGAATTTGGCTTGTCACTACTCGTGGATCATGTATCTACTTTTTGGTTTGATTAGTACCATATGGAACATATGTGACATTTTGGTTTCTAACATGTTATAACCCTTGTAGGTCTCTTCCTTCCAGCCGTTGTAAGGCCAATTCTGGATTCCTTTGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTAAGTTCAAAATCTTCACAAAGTGTAAAATGAATTGTCTGCATGCAACAAGTCTGTATTTTTGTAGTTGTATAATTTTCAGCTTTTTGGTAAGTGAGATTCCTTGATCAACACAATTTCCTTCTAAAAGAAGTTCATTTCTTTTTGCCTTTTAGTGCCTCAACATTGGTGCTACTAAATTATTCATTTACTTCAACATTTATTGTAAATTTATATATATTGTCGACTTTGCAGGTGGTTGCAAGTATGACTGGAAAGAAATAGGGATGATCGATCTCAGCAACACAAGAAGGATTGTTCTTAATGGATCATTGTTTTTTTTTCTTAATCAAATTTCCTGCTCTTCTGCCGTAAAATAAGCCCTCTACAATCTAATCGGATATCAAGTTTGATAGCGTAGCCATTTTTAGACATTACCTTGTTGTTTTATGCCCATACACAAGGCTGATTTTCAAGATATTTCAGTTCTAAGTTTGAAGCCTGAGTAAAACTTGCATAAATTGAGCCCTACAAACTCCTTTGATTGGTTTCCTACCATTCGTCTCCAAATATTTATACTGTTACAGGACTTCATGATGAGACGATTATGAACCGATACACGAAAGTGATGACTAATTCATGGCTGTGTTGGTCTTTCTTGAAGTTACCAGGTTTACCATTTTTCTTTAATGATAATTGGATCCAAGTTCCGTTTGAT AGAAGATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCTGTGGTGACTGCATCGTGTATCATCGGTGGAATTGGTCTCTTCCTTCCAGCCGTTGTAAGGCCAATTCTGGATTCCTTTGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAGGGATGATCGATCTCAGCAACACAAGAAGGATTGTTCTTAATGGATCATTGTTTTTTTTTCTTAATCAAATTTCCTGCTCTTCTGCCGTAAAATAAGCCCTCTACAATCTAATCGGATATCAAGTTTGATAGCGTAGCCATTTTTAGACATTACCTTGTTGTTTTATGCCCATACACAAGGCTGATTTTCAAGATATTTCAGTTCTAAGTTTGAAGCCTGAGTAAAACTTGCATAAATTGAGCCCTACAAACTCCTTTGATTGGTTTCCTACCATTCGTCTCCAAATATTTATACTGTTACAGGACTTCATGATGAGACGATTATGAACCGATACACGAAAGTGATGACTAATTCATGGCTGTGTTGGTCTTTCTTGAAGTTACCAGGTTTACCATTTTTCTTTAATGATAATTGGATCCAAGTTCCGTTTGAT ATGCCGGTCATGGAGAAGCTGAAGATGTTCGTAGTTCAAGAGCCTGTGGTGACTGCATCGTGTATCATCGGTGGAATTGGTCTCTTCCTTCCAGCCGTTGTAAGGCCAATTCTGGATTCCTTTGAAGCATCTAAGCAAGTTCCTCAGCCTGTATTAAGTGATGTGGTTGCAAGTATGACTGGAAAGAAATAG MPVMEKLKMFVVQEPVVTASCIIGGIGLFLPAVVRPILDSFEASKQVPQPVLSDVVASMTGKK
BLAST of Carg04963 vs. NCBI nr
Match: XP_022959928.1 (uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_022959929.1 uncharacterized protein LOC111460833 [Cucurbita moschata] >XP_023005103.1 uncharacterized protein LOC111498190 [Cucurbita maxima] >XP_023513591.1 uncharacterized protein LOC111778152 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 6.8e-25 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of Carg04963 vs. NCBI nr
Match: XP_008459762.1 (PREDICTED: uncharacterized protein LOC103498799 [Cucumis melo] >ADN34227.1 fiber protein fb11 [Cucumis melo subsp. melo]) HSP 1 Score: 117.1 bits (292), Expect = 2.2e-23 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. NCBI nr
Match: CDP08658.1 (unnamed protein product [Coffea canephora]) HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. NCBI nr
Match: XP_022958795.1 (uncharacterized protein LOC111459960 [Cucurbita moschata] >XP_023547705.1 uncharacterized protein LOC111806568 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. NCBI nr
Match: XP_023006679.1 (uncharacterized protein LOC111499335 [Cucurbita maxima] >XP_023006681.1 uncharacterized protein LOC111499335 [Cucurbita maxima]) HSP 1 Score: 116.3 bits (290), Expect = 3.7e-23 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. TAIR10
Match: AT2G46540.1 (unknown protein) HSP 1 Score: 101.7 bits (252), Expect = 1.7e-22 Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0
BLAST of Carg04963 vs. TrEMBL
Match: tr|A0A1S3CAX6|A0A1S3CAX6_CUCME (uncharacterized protein LOC103498799 OS=Cucumis melo OX=3656 GN=LOC103498799 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. TrEMBL
Match: tr|E5GCM8|E5GCM8_CUCME (Fiber protein fb11 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-23 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. TrEMBL
Match: tr|A0A068UM29|A0A068UM29_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00027698001 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-23 Identity = 59/63 (93.65%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Carg04963 vs. TrEMBL
Match: tr|A0A2I4EG73|A0A2I4EG73_9ROSI (uncharacterized protein LOC108989287 OS=Juglans regia OX=51240 GN=LOC108989287 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.9e-22 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of Carg04963 vs. TrEMBL
Match: tr|A0A0A0KFJ9|A0A0A0KFJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G103010 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.0e-21 Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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